##gff-version 3
HG00642_chrY	CAT	gene	79800	81148	.	+	.	source_gene_common_name=ENSG00000292329;source_gene=ENSG00000292329.1;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;gene_id=HG00642_ch_G0000001;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000292329;gene_sources=liftoff;ID=HG00642_ch_G0000001;Name=ENSG00000292329
HG00642_chrY	CAT	transcript	79800	81148	1000	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00642_ch_T0000001;gene_id=HG00642_ch_G0000001;Parent=HG00642_ch_G0000001;transcript_name=HG00642_ch_T0000001;gene_name=ENSG00000292329;ID=HG00642_ch_T0000001;Name=ENSG00000292329
HG00642_chrY	CAT	exon	79800	79903	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00642_ch_T0000001;gene_id=HG00642_ch_G0000001;Parent=HG00642_ch_T0000001;transcript_name=HG00642_ch_T0000001;gene_name=ENSG00000292329;ID=exon:HG00642_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	79904	80993	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00642_ch_T0000001;gene_id=HG00642_ch_G0000001;Parent=HG00642_ch_T0000001;transcript_name=HG00642_ch_T0000001;gene_name=ENSG00000292329;ID=intron:HG00642_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	80994	81148	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00642_ch_T0000001;gene_id=HG00642_ch_G0000001;Parent=HG00642_ch_T0000001;transcript_name=HG00642_ch_T0000001;gene_name=ENSG00000292329;ID=exon:HG00642_ch_T0000001:1;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	93739	100679	.	-	.	source_gene_common_name=ENSG00000310553;source_gene=ENSG00000310553.1;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;gene_id=HG00642_ch_G0000002;gene_biotype=lncRNA;gene_name=ENSG00000310553;gene_sources=liftoff;ID=HG00642_ch_G0000002;Name=ENSG00000310553
HG00642_chrY	CAT	transcript	93739	100679	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_G0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=HG00642_ch_T0000002;Name=ENSG00000310553
HG00642_chrY	CAT	exon	93739	93930	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_T0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00642_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	93931	100151	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_T0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=intron:HG00642_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	100152	100290	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_T0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00642_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	100291	100530	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_T0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=intron:HG00642_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	100531	100679	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.58299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG00642_ch_T0000002;gene_id=HG00642_ch_G0000002;Parent=HG00642_ch_T0000002;transcript_name=HG00642_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00642_ch_T0000002:2;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	100791	132135	.	+	.	source_gene_common_name=PLCXD1;source_gene=ENSG00000292344.1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;gene_id=HG00642_ch_G0000003;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff;ID=HG00642_ch_G0000003;Name=PLCXD1
HG00642_chrY	CAT	transcript	100791	132132	100	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=HG00642_ch_T0000003;Name=PLCXD1
HG00642_chrY	CAT	exon	100791	100863	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	100864	105875	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	105876	106078	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	106079	108551	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115104	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115104	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115105	115702	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115858	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	115703	115858	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115859	117238	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	117239	117422	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	117239	117422	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	117423	127886	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	127887	132132	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	127887	128125	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	128123	128125	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00642_ch_T0000003;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000003;transcript_name=HG00642_ch_T0000003;gene_name=PLCXD1;ID=stop_codon:HG00642_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	100793	115741	1000	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=HG00642_ch_T0000004;Name=PLCXD1
HG00642_chrY	CAT	exon	100793	100863	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	100864	108551	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115120	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115121	115702	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115741	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00642_ch_T0000004;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000004;transcript_name=HG00642_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	100822	115833	100	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=HG00642_ch_T0000005;Name=PLCXD1
HG00642_chrY	CAT	exon	100822	100863	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	100864	108551	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000005;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115104	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115104	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115105	115702	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115833	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	115703	115833	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00642_ch_T0000005;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000005;transcript_name=HG00642_ch_T0000005;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	105423	113196	100	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=HG00642_ch_T0000007;Name=PLCXD1
HG00642_chrY	CAT	exon	105423	105531	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	105532	105875	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	105876	106078	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	106079	108551	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00642_ch_T0000007;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000007;transcript_name=HG00642_ch_T0000007;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	105604	113114	100	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=HG00642_ch_T0000008;Name=PLCXD1
HG00642_chrY	CAT	exon	105604	105666	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	105667	105875	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	105876	106078	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	106079	108551	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113114	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113114	.	+	2	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00642_ch_T0000008;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000008;transcript_name=HG00642_ch_T0000008;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	105775	132135	100	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=HG00642_ch_T0000009;Name=PLCXD1
HG00642_chrY	CAT	exon	105775	106078	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	106079	108551	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115104	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115104	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115105	115702	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115858	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	115703	115858	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115859	117238	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	117239	117422	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	117239	117422	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	117423	127886	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	127887	132135	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	127887	128125	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	128123	128125	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00642_ch_T0000009;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000009;transcript_name=HG00642_ch_T0000009;gene_name=PLCXD1;ID=stop_codon:HG00642_ch_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	107548	113156	100	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=HG00642_ch_T0000010;Name=PLCXD1
HG00642_chrY	CAT	exon	107548	107586	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	107587	108551	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113156	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113156	.	+	2	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00642_ch_T0000010;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000010;transcript_name=HG00642_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	107851	115843	100	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=HG00642_ch_T0000011;Name=PLCXD1
HG00642_chrY	CAT	exon	107851	107874	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	107875	108551	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115104	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115104	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115105	115702	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115843	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	115703	115843	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00642_ch_T0000011;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000011;transcript_name=HG00642_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	107865	115833	100	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=HG00642_ch_T0000012;Name=PLCXD1
HG00642_chrY	CAT	exon	107865	107906	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	107907	108551	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	108552	108699	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115104	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115104	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	115105	115702	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	115703	115833	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	115703	115833	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00642_ch_T0000012;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000012;transcript_name=HG00642_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	108120	115085	100	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_G0000003;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=HG00642_ch_T0000013;Name=PLCXD1
HG00642_chrY	CAT	exon	108120	108699	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	108573	108699	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	108573	108575	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=start_codon:HG00642_ch_T0000013;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	108700	113059	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	113060	113196	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	113060	113196	.	+	2	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	113197	114975	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00642_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	114976	115085	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00642_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	114976	115085	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00642_ch_T0000013;gene_id=HG00642_ch_G0000003;Parent=HG00642_ch_T0000013;transcript_name=HG00642_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00642_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	103065	106219	.	-	.	source_gene_common_name=ENSG00000310554;source_gene=ENSG00000310554.1;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;gene_id=HG00642_ch_G0000004;gene_biotype=lncRNA;gene_name=ENSG00000310554;gene_sources=liftoff;ID=HG00642_ch_G0000004;Name=ENSG00000310554
HG00642_chrY	CAT	transcript	103065	106219	1000	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00642_ch_T0000006;gene_id=HG00642_ch_G0000004;Parent=HG00642_ch_G0000004;transcript_name=HG00642_ch_T0000006;gene_name=ENSG00000310554;ID=HG00642_ch_T0000006;Name=ENSG00000310554
HG00642_chrY	CAT	exon	103065	103891	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00642_ch_T0000006;gene_id=HG00642_ch_G0000004;Parent=HG00642_ch_T0000006;transcript_name=HG00642_ch_T0000006;gene_name=ENSG00000310554;ID=exon:HG00642_ch_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	103892	105879	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00642_ch_T0000006;gene_id=HG00642_ch_G0000004;Parent=HG00642_ch_T0000006;transcript_name=HG00642_ch_T0000006;gene_name=ENSG00000310554;ID=intron:HG00642_ch_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	105880	106219	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00642_ch_T0000006;gene_id=HG00642_ch_G0000004;Parent=HG00642_ch_T0000006;transcript_name=HG00642_ch_T0000006;gene_name=ENSG00000310554;ID=exon:HG00642_ch_T0000006:1;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	132125	150643	.	-	.	source_gene_common_name=GTPBP6;source_gene=ENSG00000292358.2;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;gene_id=HG00642_ch_G0000005;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff;ID=HG00642_ch_G0000005;Name=GTPBP6
HG00642_chrY	CAT	transcript	132125	150643	100	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_G0000005;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=HG00642_ch_T0000014;Name=GTPBP6
HG00642_chrY	CAT	exon	132125	133976	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	133853	133976	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	133853	133855	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=stop_codon:HG00642_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	133977	136138	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136139	136291	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	136139	136291	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136292	136510	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136511	136659	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	136511	136659	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136660	140536	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	140537	140745	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	140537	140745	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	140746	141883	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	141884	142042	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	141884	142042	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	142043	143347	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	143348	143415	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	143348	143415	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	143416	144087	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	144088	144218	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	144088	144218	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	144219	144423	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	144424	144494	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	144424	144494	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	144495	148768	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	148769	148906	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	148769	148906	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	148907	150283	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	150284	150643	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	150284	150632	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	150630	150632	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00642_ch_T0000014;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000014;transcript_name=HG00642_ch_T0000014;gene_name=GTPBP6;ID=start_codon:HG00642_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	133308	141581	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_G0000005;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=HG00642_ch_T0000015;Name=GTPBP6
HG00642_chrY	CAT	exon	133308	133976	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	133977	136138	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136139	136291	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136292	136510	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136511	136659	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136660	140536	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	140537	141581	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00642_ch_T0000015;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000015;transcript_name=HG00642_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	133538	150641	100	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_G0000005;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=HG00642_ch_T0000016;Name=GTPBP6
HG00642_chrY	CAT	exon	133538	133976	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	133853	133976	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	133853	133855	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=stop_codon:HG00642_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	133977	136138	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136139	136291	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	136139	136291	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136292	136510	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	136511	136659	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	136511	136659	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	136660	140536	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	140537	140745	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	140537	140745	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	140746	141883	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	141884	142042	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	141884	142042	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	142043	143347	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	143348	143415	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	143348	143415	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	143416	144087	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	144088	144218	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	144088	144218	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	144219	144423	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	144424	144494	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	144424	144494	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	144495	148768	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	148769	148906	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	148769	148906	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	148907	150283	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00642_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	150284	150641	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00642_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	150284	150632	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=CDS:HG00642_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	150630	150632	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00642_ch_T0000016;gene_id=HG00642_ch_G0000005;Parent=HG00642_ch_T0000016;transcript_name=HG00642_ch_T0000016;gene_name=GTPBP6;ID=start_codon:HG00642_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	152835	153689	.	+	.	source_gene_common_name=LINC00685;source_gene=ENSG00000292342.1;alternative_source_transcripts=ENST00000711187.1,ENST00000711187.1;gene_id=HG00642_ch_G0000006;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff;ID=HG00642_ch_G0000006;Name=LINC00685
HG00642_chrY	CAT	transcript	152835	153689	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1,ENST00000711187.1;transcript_id=HG00642_ch_T0000017;gene_id=HG00642_ch_G0000006;Parent=HG00642_ch_G0000006;transcript_name=HG00642_ch_T0000017;gene_name=LINC00685;ID=HG00642_ch_T0000017;Name=LINC00685
HG00642_chrY	CAT	exon	152835	153093	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1,ENST00000711187.1;transcript_id=HG00642_ch_T0000017;gene_id=HG00642_ch_G0000006;Parent=HG00642_ch_T0000017;transcript_name=HG00642_ch_T0000017;gene_name=LINC00685;ID=exon:HG00642_ch_T0000017:0;Name=LINC00685;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	153094	153520	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1,ENST00000711187.1;transcript_id=HG00642_ch_T0000017;gene_id=HG00642_ch_G0000006;Parent=HG00642_ch_T0000017;transcript_name=HG00642_ch_T0000017;gene_name=LINC00685;ID=intron:HG00642_ch_T0000017:0;Name=LINC00685;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	153521	153689	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1,ENST00000711187.1;transcript_id=HG00642_ch_T0000017;gene_id=HG00642_ch_G0000006;Parent=HG00642_ch_T0000017;transcript_name=HG00642_ch_T0000017;gene_name=LINC00685;ID=exon:HG00642_ch_T0000017:1;Name=LINC00685;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	165974	217629	.	-	.	source_gene_common_name=PPP2R3B;source_gene=ENSG00000292327.1;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;gene_id=HG00642_ch_G0000007;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000007;Name=PPP2R3B
HG00642_chrY	CAT	transcript	165974	217581	100	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=HG00642_ch_T0000018;Name=PPP2R3B
HG00642_chrY	CAT	exon	165974	166558	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	166408	166558	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	166408	166410	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=stop_codon:HG00642_ch_T0000018;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	166559	170644	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170645	170751	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	170645	170751	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170752	170818	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170819	170937	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	170819	170937	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	172917	173092	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	173508	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	173419	173508	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173509	173993	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173994	174042	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	173994	174042	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174043	177193	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177350	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	177194	177350	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177351	177858	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177859	177945	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	177859	177945	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177946	178385	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178386	178460	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	178386	178460	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178989	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	178887	178989	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178990	179242	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	179243	179346	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	179243	179346	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	179347	193043	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	193044	193229	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	193044	193229	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	193230	217041	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	217042	217581	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000018:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	217042	217365	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000018:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	217363	217365	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00642_ch_T0000018;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000018;transcript_name=HG00642_ch_T0000018;gene_name=PPP2R3B;ID=start_codon:HG00642_ch_T0000018;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	166276	173822	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=HG00642_ch_T0000019;Name=PPP2R3B
HG00642_chrY	CAT	exon	166276	166558	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000019:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	166559	170644	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000019:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170645	170937	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000019:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000019:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000019:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000019:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	173822	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00642_ch_T0000019;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000019;transcript_name=HG00642_ch_T0000019;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000019:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	166276	173822	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=HG00642_ch_T0000020;Name=PPP2R3B
HG00642_chrY	CAT	exon	166276	166558	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	166559	170644	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170645	170751	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170752	170818	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170819	170937	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	173822	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=298.991;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000020;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000020;transcript_name=HG00642_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	166280	178977	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=HG00642_ch_T0000021;Name=PPP2R3B
HG00642_chrY	CAT	exon	166280	170937	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	174042	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174043	177193	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177350	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177351	177858	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177859	177945	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177946	178385	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178386	178460	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178977	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00642_ch_T0000021;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000021;transcript_name=HG00642_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	166280	178977	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=HG00642_ch_T0000022;Name=PPP2R3B
HG00642_chrY	CAT	exon	166280	170751	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170752	170818	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	170819	170937	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	174042	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174043	177193	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177350	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177351	177858	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177859	177945	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177946	178385	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178386	178460	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178977	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.259;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00642_ch_T0000022;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000022;transcript_name=HG00642_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	170654	177307	1000	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=HG00642_ch_T0000023;Name=PPP2R3B
HG00642_chrY	CAT	exon	170654	170937	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	170938	172916	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	173508	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173509	173993	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173994	174042	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174043	177193	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177307	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.43899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00642_ch_T0000023;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000023;transcript_name=HG00642_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	172917	177304	1000	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=HG00642_ch_T0000024;Name=PPP2R3B
HG00642_chrY	CAT	exon	172917	173092	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173093	173418	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173419	173508	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	173509	173993	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	173994	174348	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174349	177193	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177304	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00642_ch_T0000024;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000024;transcript_name=HG00642_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	174022	178199	1000	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=HG00642_ch_T0000025;Name=PPP2R3B
HG00642_chrY	CAT	exon	174022	174042	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000025;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	174043	177193	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000025;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177194	177350	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000025;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177351	177858	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000025;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177859	178199	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00642_ch_T0000025;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000025;transcript_name=HG00642_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	176574	217629	1000	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=HG00642_ch_T0000026;Name=PPP2R3B
HG00642_chrY	CAT	exon	176574	177350	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177351	177858	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	177859	177945	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	177946	178385	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178386	178460	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178989	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178990	179242	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	179243	179346	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	179347	193043	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	193044	193229	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	193230	193893	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	193894	193971	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	193972	217041	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	217042	217629	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00642_ch_T0000026;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000026;transcript_name=HG00642_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	178322	193155	1000	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=HG00642_ch_T0000027;Name=PPP2R3B
HG00642_chrY	CAT	exon	178322	178460	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178989	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178990	179242	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	179243	179346	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	179347	193043	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	193044	193155	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00642_ch_T0000027;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000027;transcript_name=HG00642_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	178405	179491	1000	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=HG00642_ch_T0000028;Name=PPP2R3B
HG00642_chrY	CAT	exon	178405	178460	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000028;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178461	178886	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000028;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	178887	178989	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000028;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	178990	179242	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000028;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	179243	179491	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00642_ch_T0000028;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000028;transcript_name=HG00642_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	179264	205012	100	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_G0000007;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=HG00642_ch_T0000029;Name=PPP2R3B
HG00642_chrY	CAT	exon	179264	179346	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	179264	179346	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	179347	193043	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	193044	193229	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	193044	193229	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	193230	204499	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=intron:HG00642_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	204500	205012	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00642_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	204500	204739	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=CDS:HG00642_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	204737	204739	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00642_ch_T0000029;gene_id=HG00642_ch_G0000007;Parent=HG00642_ch_T0000029;transcript_name=HG00642_ch_T0000029;gene_name=PPP2R3B;ID=start_codon:HG00642_ch_T0000029;Name=PPP2R3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	217636	347214	.	+	.	source_gene_common_name=ENSG00000292349;source_gene=ENSG00000292349.2;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;gene_id=HG00642_ch_G0000008;gene_biotype=lncRNA;gene_name=ENSG00000292349;gene_sources=liftoff;ID=HG00642_ch_G0000008;Name=ENSG00000292349
HG00642_chrY	CAT	transcript	217636	252469	1000	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00642_ch_T0000030;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000030;gene_name=ENSG00000292349;ID=HG00642_ch_T0000030;Name=ENSG00000292349
HG00642_chrY	CAT	exon	217636	217746	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00642_ch_T0000030;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000030;transcript_name=HG00642_ch_T0000030;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000030:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	217747	252157	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00642_ch_T0000030;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000030;transcript_name=HG00642_ch_T0000030;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000030:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	252158	252469	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00642_ch_T0000030;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000030;transcript_name=HG00642_ch_T0000030;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000030:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	217640	252464	1000	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=HG00642_ch_T0000031;Name=ENSG00000292349
HG00642_chrY	CAT	exon	217640	217746	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000031;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000031:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	217747	249408	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000031;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000031:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	249409	249897	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000031;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000031:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	249898	252157	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000031;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000031:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	252158	252464	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00642_ch_T0000031;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000031;transcript_name=HG00642_ch_T0000031;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000031:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	217654	237149	1000	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.484;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00642_ch_T0000032;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000032;gene_name=ENSG00000292349;ID=HG00642_ch_T0000032;Name=ENSG00000292349
HG00642_chrY	CAT	exon	217654	217964	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.484;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00642_ch_T0000032;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000032;transcript_name=HG00642_ch_T0000032;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000032:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	217965	236098	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.484;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00642_ch_T0000032;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000032;transcript_name=HG00642_ch_T0000032;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000032:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	236099	237149	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.484;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00642_ch_T0000032;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000032;transcript_name=HG00642_ch_T0000032;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000032:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	217657	302907	1000	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=HG00642_ch_T0000033;Name=ENSG00000292349
HG00642_chrY	CAT	exon	217657	217964	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000033:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	217965	290219	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000033:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	290220	290832	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000033:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	290833	300299	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000033:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	300300	300420	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000033:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	300421	301472	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000033:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	301473	301671	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000033:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	301672	302277	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000033:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	302278	302907	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.89300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00642_ch_T0000033;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000033;transcript_name=HG00642_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000033:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	217709	347214	1000	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=HG00642_ch_T0000034;Name=ENSG00000292349
HG00642_chrY	CAT	exon	217709	217964	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	217965	266948	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	266949	267063	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	267064	268976	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	268977	269143	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	269144	290219	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	290220	290832	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	290833	318901	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	318902	319042	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	319043	325583	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	325584	325699	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	325700	331632	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	331633	331706	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	331707	346151	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000034:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	346152	347214	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.803;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00642_ch_T0000034;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000034;transcript_name=HG00642_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000034:7;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	236390	249167	1000	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=HG00642_ch_T0000036;Name=ENSG00000292349
HG00642_chrY	CAT	exon	236390	237022	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	237023	239549	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	239550	239796	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	239797	246757	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	246758	247046	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000036:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	247047	248791	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000036:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	248792	249167	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00642_ch_T0000036;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000036;transcript_name=HG00642_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000036:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	236646	300597	1000	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=HG00642_ch_T0000037;Name=ENSG00000292349
HG00642_chrY	CAT	exon	236646	236993	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000037;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	236994	290219	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000037;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	290220	290832	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000037;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	290833	300299	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000037;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	300300	300597	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00642_ch_T0000037;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000037;transcript_name=HG00642_ch_T0000037;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000037:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	245103	247077	1000	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00642_ch_T0000038;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000038;gene_name=ENSG00000292349;ID=HG00642_ch_T0000038;Name=ENSG00000292349
HG00642_chrY	CAT	exon	245103	245548	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00642_ch_T0000038;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000038;transcript_name=HG00642_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	245549	246757	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00642_ch_T0000038;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000038;transcript_name=HG00642_ch_T0000038;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	246758	247077	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00642_ch_T0000038;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000038;transcript_name=HG00642_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	246757	252469	1000	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=HG00642_ch_T0000039;Name=ENSG00000292349
HG00642_chrY	CAT	exon	246757	246820	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000039;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	246821	249273	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000039;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	249274	249897	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000039;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	249898	252157	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000039;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	252158	252469	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00642_ch_T0000039;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000039;transcript_name=HG00642_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	249633	252466	1000	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00642_ch_T0000040;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_G0000008;transcript_name=HG00642_ch_T0000040;gene_name=ENSG00000292349;ID=HG00642_ch_T0000040;Name=ENSG00000292349
HG00642_chrY	CAT	exon	249633	249838	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00642_ch_T0000040;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000040;transcript_name=HG00642_ch_T0000040;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	249839	252157	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00642_ch_T0000040;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000040;transcript_name=HG00642_ch_T0000040;gene_name=ENSG00000292349;ID=intron:HG00642_ch_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	252158	252466	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00642_ch_T0000040;gene_id=HG00642_ch_G0000008;Parent=HG00642_ch_T0000040;transcript_name=HG00642_ch_T0000040;gene_name=ENSG00000292349;ID=exon:HG00642_ch_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	218774	219063	.	-	.	source_gene_common_name=Metazoa_SRP;source_gene=ENSG00000292350.1;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;gene_id=HG00642_ch_G0000009;gene_biotype=misc_RNA;gene_name=Metazoa_SRP;gene_sources=liftoff;ID=HG00642_ch_G0000009;Name=Metazoa_SRP
HG00642_chrY	CAT	transcript	218774	219063	1000	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG00642_ch_T0000035;gene_id=HG00642_ch_G0000009;Parent=HG00642_ch_G0000009;transcript_name=HG00642_ch_T0000035;gene_name=Metazoa_SRP;ID=HG00642_ch_T0000035;Name=Metazoa_SRP
HG00642_chrY	CAT	exon	218774	219063	.	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG00642_ch_T0000035;gene_id=HG00642_ch_G0000009;Parent=HG00642_ch_T0000035;transcript_name=HG00642_ch_T0000035;gene_name=Metazoa_SRP;ID=exon:HG00642_ch_T0000035:0;Name=Metazoa_SRP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	358916	359243	.	-	.	source_gene_common_name=FABP5P13;source_gene=ENSG00000292352.1;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;gene_id=HG00642_ch_G0000010;gene_biotype=processed_pseudogene;gene_name=FABP5P13;gene_sources=liftoff;ID=HG00642_ch_G0000010;Name=FABP5P13
HG00642_chrY	CAT	transcript	358916	359243	1000	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG00642_ch_T0000041;gene_id=HG00642_ch_G0000010;Parent=HG00642_ch_G0000010;transcript_name=HG00642_ch_T0000041;gene_name=FABP5P13;ID=HG00642_ch_T0000041;Name=FABP5P13
HG00642_chrY	CAT	exon	358916	359243	.	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG00642_ch_T0000041;gene_id=HG00642_ch_G0000010;Parent=HG00642_ch_T0000041;transcript_name=HG00642_ch_T0000041;gene_name=FABP5P13;ID=exon:HG00642_ch_T0000041:0;Name=FABP5P13;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	397336	397452	.	-	.	source_gene_common_name=KRT18P53;source_gene=ENSG00000292353.1;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;gene_id=HG00642_ch_G0000011;gene_biotype=processed_pseudogene;gene_name=KRT18P53;gene_sources=liftoff;ID=HG00642_ch_G0000011;Name=KRT18P53
HG00642_chrY	CAT	transcript	397336	397452	1000	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG00642_ch_T0000042;gene_id=HG00642_ch_G0000011;Parent=HG00642_ch_G0000011;transcript_name=HG00642_ch_T0000042;gene_name=KRT18P53;ID=HG00642_ch_T0000042;Name=KRT18P53
HG00642_chrY	CAT	exon	397336	397452	.	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG00642_ch_T0000042;gene_id=HG00642_ch_G0000011;Parent=HG00642_ch_T0000042;transcript_name=HG00642_ch_T0000042;gene_name=KRT18P53;ID=exon:HG00642_ch_T0000042:0;Name=KRT18P53;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	451407	452215	.	+	.	source_gene_common_name=ENSG00000310543;source_gene=ENSG00000310543.1;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;gene_id=HG00642_ch_G0000012;gene_biotype=lncRNA;gene_name=ENSG00000310543;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000012;Name=ENSG00000310543
HG00642_chrY	CAT	transcript	451407	452215	1000	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00642_ch_T0000043;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_G0000012;transcript_name=HG00642_ch_T0000043;gene_name=ENSG00000310543;ID=HG00642_ch_T0000043;Name=ENSG00000310543
HG00642_chrY	CAT	exon	451407	451802	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00642_ch_T0000043;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000043;transcript_name=HG00642_ch_T0000043;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000043:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	451803	451978	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00642_ch_T0000043;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000043;transcript_name=HG00642_ch_T0000043;gene_name=ENSG00000310543;ID=intron:HG00642_ch_T0000043:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	451979	452215	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00642_ch_T0000043;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000043;transcript_name=HG00642_ch_T0000043;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000043:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	451497	452215	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG00642_ch_T0000044;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_G0000012;transcript_name=HG00642_ch_T0000044;gene_name=ENSG00000310543;ID=HG00642_ch_T0000044;Name=ENSG00000310543
HG00642_chrY	CAT	exon	451497	452215	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG00642_ch_T0000044;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000044;transcript_name=HG00642_ch_T0000044;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000044:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	451497	452215	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00642_ch_T0000045;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_G0000012;transcript_name=HG00642_ch_T0000045;gene_name=ENSG00000310543;ID=HG00642_ch_T0000045;Name=ENSG00000310543
HG00642_chrY	CAT	exon	451497	451802	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00642_ch_T0000045;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000045;transcript_name=HG00642_ch_T0000045;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000045:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	451803	451875	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00642_ch_T0000045;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000045;transcript_name=HG00642_ch_T0000045;gene_name=ENSG00000310543;ID=intron:HG00642_ch_T0000045:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	451876	452215	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00642_ch_T0000045;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000045;transcript_name=HG00642_ch_T0000045;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000045:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	451519	452215	1000	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00642_ch_T0000046;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_G0000012;transcript_name=HG00642_ch_T0000046;gene_name=ENSG00000310543;ID=HG00642_ch_T0000046;Name=ENSG00000310543
HG00642_chrY	CAT	exon	451519	451802	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00642_ch_T0000046;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000046;transcript_name=HG00642_ch_T0000046;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000046:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	451803	451936	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00642_ch_T0000046;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000046;transcript_name=HG00642_ch_T0000046;gene_name=ENSG00000310543;ID=intron:HG00642_ch_T0000046:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	451937	452215	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00642_ch_T0000046;gene_id=HG00642_ch_G0000012;Parent=HG00642_ch_T0000046;transcript_name=HG00642_ch_T0000046;gene_name=ENSG00000310543;ID=exon:HG00642_ch_T0000046:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	475513	509857	.	+	.	source_gene_common_name=SHOX;source_gene=ENSG00000292354.1;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;gene_id=HG00642_ch_G0000013;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff;ID=HG00642_ch_G0000013;Name=SHOX
HG00642_chrY	CAT	transcript	475513	509857	100	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_G0000013;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=HG00642_ch_T0000047;Name=SHOX
HG00642_chrY	CAT	exon	475513	475770	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	475771	481495	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=intron:HG00642_ch_T0000047:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	481496	482204	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	481928	482204	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=CDS:HG00642_ch_T0000047:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	481928	481930	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=start_codon:HG00642_ch_T0000047;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	482205	485647	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=intron:HG00642_ch_T0000047:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	485648	485856	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	485648	485856	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=CDS:HG00642_ch_T0000047:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	485857	491681	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=intron:HG00642_ch_T0000047:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491682	491739	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491682	491739	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=CDS:HG00642_ch_T0000047:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491740	491859	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=intron:HG00642_ch_T0000047:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491860	491948	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491860	491948	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=CDS:HG00642_ch_T0000047:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491949	509230	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=intron:HG00642_ch_T0000047:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	509231	509857	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=exon:HG00642_ch_T0000047:5;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	509231	509275	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=CDS:HG00642_ch_T0000047:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	509273	509275	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00642_ch_T0000047;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000047;transcript_name=HG00642_ch_T0000047;gene_name=SHOX;ID=stop_codon:HG00642_ch_T0000047;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	475513	497702	100	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_G0000013;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=HG00642_ch_T0000048;Name=SHOX
HG00642_chrY	CAT	exon	475513	475770	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	475771	481495	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=intron:HG00642_ch_T0000048:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	481496	482204	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	481928	482204	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=CDS:HG00642_ch_T0000048:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	481928	481930	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=start_codon:HG00642_ch_T0000048;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	482205	485647	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=intron:HG00642_ch_T0000048:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	485648	485856	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	485648	485856	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=CDS:HG00642_ch_T0000048:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	485857	491681	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=intron:HG00642_ch_T0000048:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491682	491739	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491682	491739	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=CDS:HG00642_ch_T0000048:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491740	491859	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=intron:HG00642_ch_T0000048:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491860	491948	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491860	491948	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=CDS:HG00642_ch_T0000048:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491949	495274	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=intron:HG00642_ch_T0000048:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	495275	497702	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=exon:HG00642_ch_T0000048:5;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	495275	495520	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=CDS:HG00642_ch_T0000048:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	495518	495520	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00642_ch_T0000048;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000048;transcript_name=HG00642_ch_T0000048;gene_name=SHOX;ID=stop_codon:HG00642_ch_T0000048;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	481821	501818	100	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_G0000013;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=HG00642_ch_T0000049;Name=SHOX
HG00642_chrY	CAT	exon	481821	482204	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=exon:HG00642_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	481928	482204	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=CDS:HG00642_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	481928	481930	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=start_codon:HG00642_ch_T0000049;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	482205	485647	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=intron:HG00642_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	485648	485856	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=exon:HG00642_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	485648	485856	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=CDS:HG00642_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	485857	491681	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=intron:HG00642_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491682	491739	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=exon:HG00642_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491682	491739	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=CDS:HG00642_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491740	491859	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=intron:HG00642_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491860	491948	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=exon:HG00642_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491860	491948	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=CDS:HG00642_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491949	495274	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=intron:HG00642_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	495275	501818	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=exon:HG00642_ch_T0000049:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	495275	495520	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=CDS:HG00642_ch_T0000049:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	495518	495520	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00642_ch_T0000049;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000049;transcript_name=HG00642_ch_T0000049;gene_name=SHOX;ID=stop_codon:HG00642_ch_T0000049;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	481837	509857	100	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_G0000013;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=HG00642_ch_T0000050;Name=SHOX
HG00642_chrY	CAT	exon	481837	482204	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=exon:HG00642_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	481928	482204	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=CDS:HG00642_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	481928	481930	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=start_codon:HG00642_ch_T0000050;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	482205	485647	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=intron:HG00642_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	485648	485856	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=exon:HG00642_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	485648	485856	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=CDS:HG00642_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	485857	491681	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=intron:HG00642_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491682	491739	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=exon:HG00642_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491682	491739	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=CDS:HG00642_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491740	491859	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=intron:HG00642_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	491860	491948	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=exon:HG00642_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	491860	491948	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=CDS:HG00642_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	491949	509230	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=intron:HG00642_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	509231	509857	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=exon:HG00642_ch_T0000050:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	509231	509275	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=CDS:HG00642_ch_T0000050:4;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	509273	509275	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00642_ch_T0000050;gene_id=HG00642_ch_G0000013;Parent=HG00642_ch_T0000050;transcript_name=HG00642_ch_T0000050;gene_name=SHOX;ID=stop_codon:HG00642_ch_T0000050;Name=SHOX;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	815977	816920	.	-	.	source_gene_common_name=ENSG00000310541;source_gene=ENSG00000310541.1;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;gene_id=HG00642_ch_G0000014;gene_biotype=lncRNA;gene_name=ENSG00000310541;gene_sources=liftoff;ID=HG00642_ch_G0000014;Name=ENSG00000310541
HG00642_chrY	CAT	transcript	815977	816920	1000	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.296;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00642_ch_T0000051;gene_id=HG00642_ch_G0000014;Parent=HG00642_ch_G0000014;transcript_name=HG00642_ch_T0000051;gene_name=ENSG00000310541;ID=HG00642_ch_T0000051;Name=ENSG00000310541
HG00642_chrY	CAT	exon	815977	816305	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.296;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00642_ch_T0000051;gene_id=HG00642_ch_G0000014;Parent=HG00642_ch_T0000051;transcript_name=HG00642_ch_T0000051;gene_name=ENSG00000310541;ID=exon:HG00642_ch_T0000051:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	816306	816823	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.296;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00642_ch_T0000051;gene_id=HG00642_ch_G0000014;Parent=HG00642_ch_T0000051;transcript_name=HG00642_ch_T0000051;gene_name=ENSG00000310541;ID=intron:HG00642_ch_T0000051:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	816824	816920	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.296;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00642_ch_T0000051;gene_id=HG00642_ch_G0000014;Parent=HG00642_ch_T0000051;transcript_name=HG00642_ch_T0000051;gene_name=ENSG00000310541;ID=exon:HG00642_ch_T0000051:1;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	841890	846964	.	+	.	source_gene_common_name=ENSG00000292335;source_gene=ENSG00000292335.2;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;gene_id=HG00642_ch_G0000015;gene_biotype=lncRNA;gene_name=ENSG00000292335;gene_sources=liftoff;ID=HG00642_ch_G0000015;Name=ENSG00000292335
HG00642_chrY	CAT	transcript	841890	846956	1000	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_G0000015;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=HG00642_ch_T0000052;Name=ENSG00000292335
HG00642_chrY	CAT	exon	841890	842221	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000052;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000052:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	842222	845955	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000052;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000052:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	845956	846019	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000052;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000052:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	846020	846574	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000052;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000052:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	846575	846956	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00642_ch_T0000052;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000052;transcript_name=HG00642_ch_T0000052;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000052:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	841935	846956	1000	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00642_ch_T0000053;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_G0000015;transcript_name=HG00642_ch_T0000053;gene_name=ENSG00000292335;ID=HG00642_ch_T0000053;Name=ENSG00000292335
HG00642_chrY	CAT	exon	841935	842221	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00642_ch_T0000053;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000053;transcript_name=HG00642_ch_T0000053;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000053:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	842222	846574	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00642_ch_T0000053;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000053;transcript_name=HG00642_ch_T0000053;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000053:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	846575	846956	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00642_ch_T0000053;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000053;transcript_name=HG00642_ch_T0000053;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000053:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	841970	846956	1000	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_G0000015;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=HG00642_ch_T0000054;Name=ENSG00000292335
HG00642_chrY	CAT	exon	841970	842216	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000054;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000054:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	842217	845955	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000054;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000054:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	845956	846019	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000054;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000054:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	846020	846574	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000054;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000054:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	846575	846956	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00642_ch_T0000054;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000054;transcript_name=HG00642_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000054:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	841985	846964	1000	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00642_ch_T0000055;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_G0000015;transcript_name=HG00642_ch_T0000055;gene_name=ENSG00000292335;ID=HG00642_ch_T0000055;Name=ENSG00000292335
HG00642_chrY	CAT	exon	841985	842216	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00642_ch_T0000055;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000055;transcript_name=HG00642_ch_T0000055;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000055:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	842217	846574	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00642_ch_T0000055;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000055;transcript_name=HG00642_ch_T0000055;gene_name=ENSG00000292335;ID=intron:HG00642_ch_T0000055:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	846575	846964	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00642_ch_T0000055;gene_id=HG00642_ch_G0000015;Parent=HG00642_ch_T0000055;transcript_name=HG00642_ch_T0000055;gene_name=ENSG00000292335;ID=exon:HG00642_ch_T0000055:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	861055	862653	.	-	.	source_gene_common_name=RPL14P5;source_gene=ENSG00000292328.1;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;gene_id=HG00642_ch_G0000016;gene_biotype=processed_pseudogene;gene_name=RPL14P5;gene_sources=liftoff;ID=HG00642_ch_G0000016;Name=RPL14P5
HG00642_chrY	CAT	transcript	861055	862653	1000	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_G0000016;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=HG00642_ch_T0000056;Name=RPL14P5
HG00642_chrY	CAT	exon	861055	861103	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_T0000056;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=exon:HG00642_ch_T0000056:0;Name=RPL14P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	861104	861643	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_T0000056;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=intron:HG00642_ch_T0000056:0;Name=RPL14P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	861644	861932	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_T0000056;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=exon:HG00642_ch_T0000056:1;Name=RPL14P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	861933	862261	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_T0000056;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=intron:HG00642_ch_T0000056:1;Name=RPL14P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	862262	862653	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00642_ch_T0000056;gene_id=HG00642_ch_G0000016;Parent=HG00642_ch_T0000056;transcript_name=HG00642_ch_T0000056;gene_name=RPL14P5;ID=exon:HG00642_ch_T0000056:2;Name=RPL14P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	965236	966218	.	+	.	source_gene_common_name=ENSG00000310548;source_gene=ENSG00000310548.1;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;gene_id=HG00642_ch_G0000017;gene_biotype=lncRNA;gene_name=ENSG00000310548;gene_sources=liftoff;ID=HG00642_ch_G0000017;Name=ENSG00000310548
HG00642_chrY	CAT	transcript	965236	966218	1000	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00642_ch_T0000057;gene_id=HG00642_ch_G0000017;Parent=HG00642_ch_G0000017;transcript_name=HG00642_ch_T0000057;gene_name=ENSG00000310548;ID=HG00642_ch_T0000057;Name=ENSG00000310548
HG00642_chrY	CAT	exon	965236	965361	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00642_ch_T0000057;gene_id=HG00642_ch_G0000017;Parent=HG00642_ch_T0000057;transcript_name=HG00642_ch_T0000057;gene_name=ENSG00000310548;ID=exon:HG00642_ch_T0000057:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	965362	965495	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00642_ch_T0000057;gene_id=HG00642_ch_G0000017;Parent=HG00642_ch_T0000057;transcript_name=HG00642_ch_T0000057;gene_name=ENSG00000310548;ID=intron:HG00642_ch_T0000057:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	965496	966218	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00642_ch_T0000057;gene_id=HG00642_ch_G0000017;Parent=HG00642_ch_T0000057;transcript_name=HG00642_ch_T0000057;gene_name=ENSG00000310548;ID=exon:HG00642_ch_T0000057:1;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1028208	1037894	.	+	.	source_gene_common_name=ENSG00000310556;source_gene=ENSG00000310556.1;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;gene_id=HG00642_ch_G0000018;gene_biotype=lncRNA;gene_name=ENSG00000310556;gene_sources=liftoff;ID=HG00642_ch_G0000018;Name=ENSG00000310556
HG00642_chrY	CAT	transcript	1028208	1032535	1000	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00642_ch_T0000058;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_G0000018;transcript_name=HG00642_ch_T0000058;gene_name=ENSG00000310556;ID=HG00642_ch_T0000058;Name=ENSG00000310556
HG00642_chrY	CAT	exon	1028208	1028294	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00642_ch_T0000058;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000058;transcript_name=HG00642_ch_T0000058;gene_name=ENSG00000310556;ID=exon:HG00642_ch_T0000058:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1028295	1031579	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00642_ch_T0000058;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000058;transcript_name=HG00642_ch_T0000058;gene_name=ENSG00000310556;ID=intron:HG00642_ch_T0000058:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1031580	1032535	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00642_ch_T0000058;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000058;transcript_name=HG00642_ch_T0000058;gene_name=ENSG00000310556;ID=exon:HG00642_ch_T0000058:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1028236	1037894	1000	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_G0000018;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=HG00642_ch_T0000059;Name=ENSG00000310556
HG00642_chrY	CAT	exon	1028236	1028294	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000059;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=exon:HG00642_ch_T0000059:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1028295	1031579	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000059;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=intron:HG00642_ch_T0000059:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1031580	1031915	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000059;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=exon:HG00642_ch_T0000059:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1031916	1037631	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000059;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=intron:HG00642_ch_T0000059:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1037632	1037894	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00642_ch_T0000059;gene_id=HG00642_ch_G0000018;Parent=HG00642_ch_T0000059;transcript_name=HG00642_ch_T0000059;gene_name=ENSG00000310556;ID=exon:HG00642_ch_T0000059:2;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1048860	1072712	.	-	.	source_gene_common_name=CRLF2;source_gene=ENSG00000292363.1;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;gene_id=HG00642_ch_G0000019;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff;ID=HG00642_ch_G0000019;Name=CRLF2
HG00642_chrY	CAT	transcript	1048860	1072638	100	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_G0000019;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=HG00642_ch_T0000060;Name=CRLF2
HG00642_chrY	CAT	exon	1048860	1049530	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1049267	1049530	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1049267	1049269	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=stop_codon:HG00642_ch_T0000060;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1049531	1051613	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1051614	1051698	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1051614	1051698	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1051699	1055183	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1055184	1055304	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1055184	1055304	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1055305	1058487	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1058488	1058650	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1058488	1058650	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1058651	1062362	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1062363	1062496	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1062363	1062496	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1062497	1066419	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1066420	1066586	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1066420	1066586	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1066587	1068790	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1068791	1068893	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1068791	1068893	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1068894	1072544	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=intron:HG00642_ch_T0000060:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1072545	1072638	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=exon:HG00642_ch_T0000060:7;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1072545	1072623	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000060:7;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1072621	1072623	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00642_ch_T0000060;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000060;transcript_name=HG00642_ch_T0000060;gene_name=CRLF2;ID=start_codon:HG00642_ch_T0000060;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1048862	1072712	1000	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_G0000019;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=HG00642_ch_T0000061;Name=CRLF2
HG00642_chrY	CAT	exon	1048862	1049530	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1049531	1051613	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1051614	1051698	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1051699	1055183	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1055184	1055304	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1055305	1058734	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1058735	1059079	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1058861	1059079	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000061:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1058861	1058863	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=stop_codon:HG00642_ch_T0000061;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1059080	1062362	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1062363	1062496	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1062363	1062496	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000061:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1062497	1066419	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1066420	1066586	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1066420	1066586	.	-	1	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000061:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1066587	1068790	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1068791	1068890	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1068791	1068890	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000061:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1068891	1072544	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=intron:HG00642_ch_T0000061:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1072545	1072712	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=exon:HG00642_ch_T0000061:7;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1072545	1072623	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000061:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1072621	1072623	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00642_ch_T0000061;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000061;transcript_name=HG00642_ch_T0000061;gene_name=CRLF2;ID=start_codon:HG00642_ch_T0000061;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1049267	1072623	100	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_G0000019;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=HG00642_ch_T0000062;Name=CRLF2
HG00642_chrY	CAT	exon	1049267	1049530	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1049267	1049530	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1049267	1049269	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=stop_codon:HG00642_ch_T0000062;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1049531	1051613	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1051614	1051698	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1051614	1051698	.	-	1	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1051699	1055183	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1055184	1055304	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1055184	1055304	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1055305	1058487	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1058488	1058650	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1058488	1058650	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1058651	1062362	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1062363	1062496	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1062363	1062496	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1062497	1066419	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1066420	1066586	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1066420	1066432	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00642_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1066430	1066432	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=start_codon:HG00642_ch_T0000062;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1066587	1072544	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=intron:HG00642_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1072545	1072623	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00642_ch_T0000062;gene_id=HG00642_ch_G0000019;Parent=HG00642_ch_T0000062;transcript_name=HG00642_ch_T0000062;gene_name=CRLF2;ID=exon:HG00642_ch_T0000062:6;Name=CRLF2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1108159	1109160	.	-	.	source_gene_common_name=ENSG00000310545;source_gene=ENSG00000310545.1;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;gene_id=HG00642_ch_G0000020;gene_biotype=lncRNA;gene_name=ENSG00000310545;gene_sources=liftoff;ID=HG00642_ch_G0000020;Name=ENSG00000310545
HG00642_chrY	CAT	transcript	1108159	1109160	1000	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=199.401;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG00642_ch_T0000063;gene_id=HG00642_ch_G0000020;Parent=HG00642_ch_G0000020;transcript_name=HG00642_ch_T0000063;gene_name=ENSG00000310545;ID=HG00642_ch_T0000063;Name=ENSG00000310545
HG00642_chrY	CAT	exon	1108159	1109160	.	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=199.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG00642_ch_T0000063;gene_id=HG00642_ch_G0000020;Parent=HG00642_ch_T0000063;transcript_name=HG00642_ch_T0000063;gene_name=ENSG00000310545;ID=exon:HG00642_ch_T0000063:0;Name=ENSG00000310545;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1108181	1124104	.	+	.	source_gene_common_name=ENSG00000310544;source_gene=ENSG00000310544.1;gene_id=HG00642_ch_G0000021;gene_biotype=lncRNA;gene_name=ENSG00000310544;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG00642_ch_G0000021;Name=ENSG00000310544
HG00642_chrY	CAT	transcript	1108181	1124104	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_G0000021;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=HG00642_ch_T0000064;Name=ENSG00000310544
HG00642_chrY	CAT	exon	1108181	1109114	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000064;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000064:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1109115	1122594	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000064;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000064:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1122595	1122665	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000064;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000064:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1122666	1123263	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000064;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000064:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1123264	1124104	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000064;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000064;transcript_name=HG00642_ch_T0000064;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000064:2;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1108181	1124104	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_G0000021;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=HG00642_ch_T0000065;Name=ENSG00000310544
HG00642_chrY	CAT	exon	1108181	1109114	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000065;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000065:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1109115	1122594	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000065;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000065:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1122595	1122641	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000065;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000065:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1122642	1123239	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000065;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000065:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1123240	1124104	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000065;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000065;transcript_name=HG00642_ch_T0000065;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000065:2;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1108181	1124104	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000066;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_G0000021;transcript_name=HG00642_ch_T0000066;gene_name=ENSG00000310544;ID=HG00642_ch_T0000066;Name=ENSG00000310544
HG00642_chrY	CAT	exon	1108181	1109114	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000066;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000066;transcript_name=HG00642_ch_T0000066;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000066:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1109115	1122594	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000066;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000066;transcript_name=HG00642_ch_T0000066;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000066:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1122595	1124104	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.513;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG00642_ch_T0000066;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000066;transcript_name=HG00642_ch_T0000066;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000066:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1108986	1115165	1000	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00642_ch_T0000067;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_G0000021;transcript_name=HG00642_ch_T0000067;gene_name=ENSG00000310544;ID=HG00642_ch_T0000067;Name=ENSG00000310544
HG00642_chrY	CAT	exon	1108986	1109114	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00642_ch_T0000067;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000067;transcript_name=HG00642_ch_T0000067;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000067:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1109115	1114900	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00642_ch_T0000067;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000067;transcript_name=HG00642_ch_T0000067;gene_name=ENSG00000310544;ID=intron:HG00642_ch_T0000067:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1114901	1115165	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00642_ch_T0000067;gene_id=HG00642_ch_G0000021;Parent=HG00642_ch_T0000067;transcript_name=HG00642_ch_T0000067;gene_name=ENSG00000310544;ID=exon:HG00642_ch_T0000067:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1128939	1189090	.	+	.	source_gene_common_name=CSF2RA;source_gene=ENSG00000292357.2;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;gene_id=HG00642_ch_G0000022;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,transMap_pairwise;ID=HG00642_ch_G0000022;Name=CSF2RA
HG00642_chrY	CAT	transcript	1128939	1189090	100	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=HG00642_ch_T0000068;Name=CSF2RA
HG00642_chrY	CAT	exon	1128939	1129025	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1136989	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1136990	1144899	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1188743	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1188744	1189090	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1188744	1188779	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1188777	1188779	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00642_ch_T0000068;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000068;transcript_name=HG00642_ch_T0000068;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128946	1173867	100	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=HG00642_ch_T0000069;Name=CSF2RA
HG00642_chrY	CAT	exon	1128946	1129025	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1166614	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1166615	1166716	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1166615	1166716	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1166717	1167276	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173867	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000069:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173335	1173412	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173410	1173412	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00642_ch_T0000069;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000069;transcript_name=HG00642_ch_T0000069;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128954	1174313	100	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=HG00642_ch_T0000070;Name=CSF2RA
HG00642_chrY	CAT	exon	1128954	1129025	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000070:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1174313	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000070:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173335	1173412	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173410	1173412	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00642_ch_T0000070;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000070;transcript_name=HG00642_ch_T0000070;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128960	1173868	100	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=HG00642_ch_T0000071;Name=CSF2RA
HG00642_chrY	CAT	exon	1128960	1129025	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1136989	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1136990	1144899	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173868	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000071:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173335	1173412	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173410	1173412	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00642_ch_T0000071;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000071;transcript_name=HG00642_ch_T0000071;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128960	1173651	1000	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=HG00642_ch_T0000072;Name=CSF2RA
HG00642_chrY	CAT	exon	1128960	1129025	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145264	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145105	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1145103	1145105	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145265	1147997	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1166614	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1166615	1166716	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1166717	1167276	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173651	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00642_ch_T0000072;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000072;transcript_name=HG00642_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000072:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128960	1163896	1000	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=HG00642_ch_T0000073;Name=CSF2RA
HG00642_chrY	CAT	exon	1128960	1129025	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1150731	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163896	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00642_ch_T0000073;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000073;transcript_name=HG00642_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128964	1156608	100	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=HG00642_ch_T0000074;Name=CSF2RA
HG00642_chrY	CAT	exon	1128964	1129025	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1144899	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000074;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156608	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000074:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156608	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00642_ch_T0000074;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000074;transcript_name=HG00642_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128964	1186890	100	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=HG00642_ch_T0000075;Name=CSF2RA
HG00642_chrY	CAT	exon	1128964	1129025	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1186155	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1186156	1186178	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1186156	1186178	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1186179	1186510	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1186511	1186890	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000075:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1186511	1186658	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1186656	1186658	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00642_ch_T0000075;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000075;transcript_name=HG00642_ch_T0000075;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128976	1173857	100	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=HG00642_ch_T0000076;Name=CSF2RA
HG00642_chrY	CAT	exon	1128976	1129025	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1136989	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1136990	1144630	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144631	1144782	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1144783	1144899	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173857	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000076:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173335	1173412	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173410	1173412	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00642_ch_T0000076;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000076;transcript_name=HG00642_ch_T0000076;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128978	1169635	100	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=HG00642_ch_T0000077;Name=CSF2RA
HG00642_chrY	CAT	exon	1128978	1129025	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1169321	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169322	1169635	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000077:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169322	1169429	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1169427	1169429	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00642_ch_T0000077;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000077;transcript_name=HG00642_ch_T0000077;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128978	1173855	100	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=HG00642_ch_T0000078;Name=CSF2RA
HG00642_chrY	CAT	exon	1128978	1129025	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1149386	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1149387	1149411	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1149387	1149411	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1149412	1173772	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173773	1173855	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173773	1173801	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173799	1173801	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00642_ch_T0000078;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000078;transcript_name=HG00642_ch_T0000078;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128980	1186909	100	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=HG00642_ch_T0000079;Name=CSF2RA
HG00642_chrY	CAT	exon	1128980	1129025	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1186155	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1186156	1186909	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1186156	1186182	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1186180	1186182	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00642_ch_T0000079;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000079;transcript_name=HG00642_ch_T0000079;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128980	1188932	100	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=HG00642_ch_T0000080;Name=CSF2RA
HG00642_chrY	CAT	exon	1128980	1129025	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000080;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1167276	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167373	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169221	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1188743	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000080:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1188744	1188932	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000080:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1188744	1188779	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1188777	1188779	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00642_ch_T0000080;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000080;transcript_name=HG00642_ch_T0000080;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000080;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128981	1144442	1000	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=HG00642_ch_T0000081;Name=CSF2RA
HG00642_chrY	CAT	exon	1128981	1129025	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000081;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000081;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1136989	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000081;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1136990	1144091	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000081;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144092	1144442	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00642_ch_T0000081;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000081;transcript_name=HG00642_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128991	1173867	100	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=HG00642_ch_T0000082;Name=CSF2RA
HG00642_chrY	CAT	exon	1128991	1129025	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1173334	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173867	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1173335	1173522	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1173520	1173522	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00642_ch_T0000082;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000082;transcript_name=HG00642_ch_T0000082;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128991	1173867	100	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=HG00642_ch_T0000083;Name=CSF2RA
HG00642_chrY	CAT	exon	1128991	1129025	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1169139	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169195	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1169193	1169195	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173867	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00642_ch_T0000083;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000083;transcript_name=HG00642_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1128991	1173867	1000	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=HG00642_ch_T0000084;Name=CSF2RA
HG00642_chrY	CAT	exon	1128991	1129025	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1129026	1136925	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1136926	1137013	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1137014	1144899	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1144900	1145001	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1167276	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1167277	1167373	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1167277	1167324	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1167322	1167324	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1167374	1169139	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173867	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00642_ch_T0000084;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000084;transcript_name=HG00642_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1144908	1173571	100	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=HG00642_ch_T0000085;Name=CSF2RA
HG00642_chrY	CAT	exon	1144908	1145001	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1144926	1145001	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1144926	1144928	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=start_codon:HG00642_ch_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1145002	1147997	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1147998	1148140	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1147998	1148140	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150855	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150732	1150855	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151101	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1150972	1151101	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1151102	1152549	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1152550	1152722	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1152550	1152722	.	+	1	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1156541	1156674	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1157640	1157669	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1163844	1163979	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1169139	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1169140	1169221	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1169140	1169195	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00642_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1169193	1169195	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=stop_codon:HG00642_ch_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1169222	1173334	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173335	1173571	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00642_ch_T0000085;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000085;transcript_name=HG00642_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000085:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1147871	1150853	1000	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00642_ch_T0000086;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000086;gene_name=CSF2RA;ID=HG00642_ch_T0000086;Name=CSF2RA
HG00642_chrY	CAT	exon	1147871	1148140	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00642_ch_T0000086;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000086;transcript_name=HG00642_ch_T0000086;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1148141	1150731	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00642_ch_T0000086;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000086;transcript_name=HG00642_ch_T0000086;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150732	1150853	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00642_ch_T0000086;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000086;transcript_name=HG00642_ch_T0000086;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1150811	1151318	1000	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00642_ch_T0000087;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000087;gene_name=CSF2RA;ID=HG00642_ch_T0000087;Name=CSF2RA
HG00642_chrY	CAT	exon	1150811	1150855	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00642_ch_T0000087;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000087;transcript_name=HG00642_ch_T0000087;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1150856	1150971	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00642_ch_T0000087;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000087;transcript_name=HG00642_ch_T0000087;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1150972	1151318	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00642_ch_T0000087;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000087;transcript_name=HG00642_ch_T0000087;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1152666	1173855	1000	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=HG00642_ch_T0000088;Name=CSF2RA
HG00642_chrY	CAT	exon	1152666	1152722	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1152723	1156540	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1156541	1156674	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157669	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157670	1163843	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1163844	1163979	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1163980	1166250	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000088:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1166251	1166270	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1166271	1173756	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000088:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1173757	1173855	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=299.79;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00642_ch_T0000088;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000088;transcript_name=HG00642_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000088:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1156438	1157791	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG00642_ch_T0000091;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000091;gene_name=CSF2RA;ID=HG00642_ch_T0000091;Name=CSF2RA
HG00642_chrY	CAT	exon	1156438	1156674	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG00642_ch_T0000091;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000091;transcript_name=HG00642_ch_T0000091;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG00642_ch_T0000091;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000091;transcript_name=HG00642_ch_T0000091;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157791	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG00642_ch_T0000091;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000091;transcript_name=HG00642_ch_T0000091;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1156438	1158130	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_G0000022;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=HG00642_ch_T0000092;Name=CSF2RA
HG00642_chrY	CAT	exon	1156438	1156674	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000092;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1156675	1157639	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000092;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1157640	1157788	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000092;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1157789	1158127	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000092;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=intron:HG00642_ch_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1158128	1158130	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG00642_ch_T0000092;gene_id=HG00642_ch_G0000022;Parent=HG00642_ch_T0000092;transcript_name=HG00642_ch_T0000092;gene_name=CSF2RA;ID=exon:HG00642_ch_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1155828	1155902	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;gene_id=HG00642_ch_G0000023;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG00642_ch_G0000023;Name=MIR3690
HG00642_chrY	CAT	transcript	1155828	1155902	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG00642_ch_T0000089;gene_id=HG00642_ch_G0000023;Parent=HG00642_ch_G0000023;transcript_name=HG00642_ch_T0000089;gene_name=MIR3690;ID=HG00642_ch_T0000089;Name=MIR3690
HG00642_chrY	CAT	exon	1155828	1155902	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG00642_ch_T0000089;gene_id=HG00642_ch_G0000023;Parent=HG00642_ch_T0000089;transcript_name=HG00642_ch_T0000089;gene_name=MIR3690;ID=exon:HG00642_ch_T0000089:0;Name=MIR3690;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1156131	1156205	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;gene_id=HG00642_ch_G0000024;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG00642_ch_G0000024;Name=MIR3690
HG00642_chrY	CAT	transcript	1156131	1156205	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;transcript_id=HG00642_ch_T0000090;gene_id=HG00642_ch_G0000024;Parent=HG00642_ch_G0000024;transcript_name=HG00642_ch_T0000090;gene_name=MIR3690;ID=HG00642_ch_T0000090;Name=MIR3690
HG00642_chrY	CAT	exon	1156131	1156205	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;transcript_id=HG00642_ch_T0000090;gene_id=HG00642_ch_G0000024;Parent=HG00642_ch_T0000090;transcript_name=HG00642_ch_T0000090;gene_name=MIR3690;ID=exon:HG00642_ch_T0000090:0;Name=MIR3690;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1163609	1163728	.	-	.	source_gene_common_name=RNA5SP498;source_gene=ENSG00000292356.1;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;gene_id=HG00642_ch_G0000025;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP498;gene_sources=liftoff;ID=HG00642_ch_G0000025;Name=RNA5SP498
HG00642_chrY	CAT	transcript	1163609	1163728	1000	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG00642_ch_T0000093;gene_id=HG00642_ch_G0000025;Parent=HG00642_ch_G0000025;transcript_name=HG00642_ch_T0000093;gene_name=RNA5SP498;ID=HG00642_ch_T0000093;Name=RNA5SP498
HG00642_chrY	CAT	exon	1163609	1163728	.	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG00642_ch_T0000093;gene_id=HG00642_ch_G0000025;Parent=HG00642_ch_T0000093;transcript_name=HG00642_ch_T0000093;gene_name=RNA5SP498;ID=exon:HG00642_ch_T0000093:0;Name=RNA5SP498;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1201264	1240762	.	+	.	source_gene_common_name=IL3RA;source_gene=ENSG00000292332.1;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;gene_id=HG00642_ch_G0000026;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff;ID=HG00642_ch_G0000026;Name=IL3RA
HG00642_chrY	CAT	transcript	1201264	1240762	100	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_G0000026;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=HG00642_ch_T0000094;Name=IL3RA
HG00642_chrY	CAT	exon	1201264	1201574	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1201575	1206494	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1206495	1206596	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1206533	1206596	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1206533	1206535	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=start_codon:HG00642_ch_T0000094;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1206597	1216872	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1216873	1217005	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1216873	1217005	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217006	1217094	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1217095	1217279	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1217095	1217279	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217280	1220937	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1220938	1221053	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1220938	1221053	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1221054	1223577	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1223578	1223604	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1223578	1223604	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1223605	1229935	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1229936	1230050	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1229936	1230050	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1230051	1236688	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1236689	1236794	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1236689	1236794	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1236795	1239055	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1239056	1239137	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1239056	1239137	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1239138	1240462	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=intron:HG00642_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1240463	1240762	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=exon:HG00642_ch_T0000094:9;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1240463	1240537	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1240535	1240537	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00642_ch_T0000094;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000094;transcript_name=HG00642_ch_T0000094;gene_name=IL3RA;ID=stop_codon:HG00642_ch_T0000094;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1201433	1240762	100	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_G0000026;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=HG00642_ch_T0000095;Name=IL3RA
HG00642_chrY	CAT	exon	1201433	1201574	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1201575	1206494	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1206495	1206596	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1206533	1206596	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1206533	1206535	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=start_codon:HG00642_ch_T0000095;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1206597	1210082	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1210083	1210201	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1210083	1210201	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1210202	1213198	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1213199	1213313	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1213199	1213313	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1213314	1216872	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1216873	1217005	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1216873	1217005	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217006	1217094	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1217095	1217279	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1217095	1217279	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217280	1220937	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1220938	1221053	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1220938	1221053	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:5;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1221054	1223577	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1223578	1223604	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1223578	1223604	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:6;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1223605	1229935	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1229936	1230050	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1229936	1230050	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:7;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1230051	1236688	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1236689	1236794	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:9;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1236689	1236794	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:8;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1236795	1239055	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:9;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1239056	1239137	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:10;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1239056	1239137	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:9;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1239138	1240462	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=intron:HG00642_ch_T0000095:10;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1240463	1240762	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=exon:HG00642_ch_T0000095:11;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1240463	1240537	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000095:10;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1240535	1240537	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00642_ch_T0000095;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000095;transcript_name=HG00642_ch_T0000095;gene_name=IL3RA;ID=stop_codon:HG00642_ch_T0000095;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1201444	1221048	100	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_G0000026;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=HG00642_ch_T0000096;Name=IL3RA
HG00642_chrY	CAT	exon	1201444	1201574	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=exon:HG00642_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1201575	1206494	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=intron:HG00642_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1206495	1206596	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=exon:HG00642_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1206533	1206596	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1206533	1206535	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=start_codon:HG00642_ch_T0000096;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1206597	1216872	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=intron:HG00642_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1216873	1217005	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=exon:HG00642_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1216873	1217005	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217006	1217094	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=intron:HG00642_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1217095	1217279	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=exon:HG00642_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1217095	1217279	.	+	1	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1217280	1220937	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=intron:HG00642_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1220938	1221048	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=exon:HG00642_ch_T0000096:4;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1220938	1221048	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00642_ch_T0000096;gene_id=HG00642_ch_G0000026;Parent=HG00642_ch_T0000096;transcript_name=HG00642_ch_T0000096;gene_name=IL3RA;ID=CDS:HG00642_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1201813	1206584	.	-	.	source_gene_common_name=ENSG00000310549;source_gene=ENSG00000310549.1;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;gene_id=HG00642_ch_G0000027;gene_biotype=lncRNA;gene_name=ENSG00000310549;gene_sources=liftoff;ID=HG00642_ch_G0000027;Name=ENSG00000310549
HG00642_chrY	CAT	transcript	1201813	1206584	1000	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.476;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00642_ch_T0000097;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_G0000027;transcript_name=HG00642_ch_T0000097;gene_name=ENSG00000310549;ID=HG00642_ch_T0000097;Name=ENSG00000310549
HG00642_chrY	CAT	exon	1201813	1202164	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00642_ch_T0000097;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000097;transcript_name=HG00642_ch_T0000097;gene_name=ENSG00000310549;ID=exon:HG00642_ch_T0000097:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1202165	1206364	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00642_ch_T0000097;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000097;transcript_name=HG00642_ch_T0000097;gene_name=ENSG00000310549;ID=intron:HG00642_ch_T0000097:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1206365	1206584	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00642_ch_T0000097;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000097;transcript_name=HG00642_ch_T0000097;gene_name=ENSG00000310549;ID=exon:HG00642_ch_T0000097:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1203409	1206582	1000	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.187;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00642_ch_T0000098;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_G0000027;transcript_name=HG00642_ch_T0000098;gene_name=ENSG00000310549;ID=HG00642_ch_T0000098;Name=ENSG00000310549
HG00642_chrY	CAT	exon	1203409	1203559	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.187;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00642_ch_T0000098;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000098;transcript_name=HG00642_ch_T0000098;gene_name=ENSG00000310549;ID=exon:HG00642_ch_T0000098:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1203560	1206364	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.187;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00642_ch_T0000098;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000098;transcript_name=HG00642_ch_T0000098;gene_name=ENSG00000310549;ID=intron:HG00642_ch_T0000098:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1206365	1206582	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.187;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00642_ch_T0000098;gene_id=HG00642_ch_G0000027;Parent=HG00642_ch_T0000098;transcript_name=HG00642_ch_T0000098;gene_name=ENSG00000310549;ID=exon:HG00642_ch_T0000098:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1244215	1250296	.	-	.	source_gene_common_name=SLC25A6;source_gene=ENSG00000292334.1;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;gene_id=HG00642_ch_G0000028;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff;ID=HG00642_ch_G0000028;Name=SLC25A6
HG00642_chrY	CAT	transcript	1244215	1250296	100	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_G0000028;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=HG00642_ch_T0000099;Name=SLC25A6
HG00642_chrY	CAT	exon	1244215	1244822	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1244665	1244822	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=CDS:HG00642_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1244665	1244667	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=stop_codon:HG00642_ch_T0000099;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1244823	1245341	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1245342	1245482	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1245342	1245482	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=CDS:HG00642_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1245483	1247303	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1247304	1247790	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1247304	1247790	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=CDS:HG00642_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1247791	1250081	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1250082	1250296	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000099:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1250082	1250192	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=CDS:HG00642_ch_T0000099:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1250190	1250192	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00642_ch_T0000099;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000099;transcript_name=HG00642_ch_T0000099;gene_name=SLC25A6;ID=start_codon:HG00642_ch_T0000099;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1245374	1250286	1000	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_G0000028;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=HG00642_ch_T0000100;Name=SLC25A6
HG00642_chrY	CAT	exon	1245374	1245482	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000100:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1245483	1247303	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000100:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1247304	1247790	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000100:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1247791	1248254	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000100:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1248255	1248353	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000100:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1248354	1250081	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000100:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1250082	1250286	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00642_ch_T0000100;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000100;transcript_name=HG00642_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000100:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1245408	1250271	1000	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_G0000028;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=HG00642_ch_T0000101;Name=SLC25A6
HG00642_chrY	CAT	exon	1245408	1245482	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000101:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1245483	1247303	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000101:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1247304	1247790	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000101:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1247791	1248254	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000101:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1248255	1248356	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000101:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1248357	1250081	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=intron:HG00642_ch_T0000101:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1250082	1250271	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00642_ch_T0000101;gene_id=HG00642_ch_G0000028;Parent=HG00642_ch_T0000101;transcript_name=HG00642_ch_T0000101;gene_name=SLC25A6;ID=exon:HG00642_ch_T0000101:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1250862	1258773	.	+	.	source_gene_common_name=LINC00106;source_gene=ENSG00000292341.2;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;gene_id=HG00642_ch_G0000029;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG00642_ch_G0000029;Name=LINC00106
HG00642_chrY	CAT	transcript	1250862	1258773	1000	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_G0000029;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=HG00642_ch_T0000102;Name=LINC00106
HG00642_chrY	CAT	exon	1250862	1250946	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=exon:HG00642_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1250947	1254622	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=intron:HG00642_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1254623	1254899	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=exon:HG00642_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1254900	1257075	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=intron:HG00642_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257076	1257209	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=exon:HG00642_ch_T0000102:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1257210	1258411	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=intron:HG00642_ch_T0000102:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1258412	1258773	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00642_ch_T0000102;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000102;transcript_name=HG00642_ch_T0000102;gene_name=LINC00106;ID=exon:HG00642_ch_T0000102:3;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1250912	1257663	1000	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_G0000029;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=HG00642_ch_T0000103;Name=LINC00106
HG00642_chrY	CAT	exon	1250912	1250946	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=exon:HG00642_ch_T0000103:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1250947	1254622	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=intron:HG00642_ch_T0000103:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1254623	1254899	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=exon:HG00642_ch_T0000103:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1254900	1257075	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=intron:HG00642_ch_T0000103:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257076	1257209	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=exon:HG00642_ch_T0000103:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1257210	1257617	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=intron:HG00642_ch_T0000103:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257618	1257663	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00642_ch_T0000103;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000103;transcript_name=HG00642_ch_T0000103;gene_name=LINC00106;ID=exon:HG00642_ch_T0000103:3;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1254623	1258773	1000	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_G0000029;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=HG00642_ch_T0000104;Name=LINC00106
HG00642_chrY	CAT	exon	1254623	1254899	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000104;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=exon:HG00642_ch_T0000104:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1254900	1257075	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000104;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=intron:HG00642_ch_T0000104:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257076	1257209	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000104;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=exon:HG00642_ch_T0000104:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1257210	1258414	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000104;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=intron:HG00642_ch_T0000104:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1258415	1258773	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00642_ch_T0000104;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000104;transcript_name=HG00642_ch_T0000104;gene_name=LINC00106;ID=exon:HG00642_ch_T0000104:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1255276	1257653	1000	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_G0000029;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=HG00642_ch_T0000105;Name=LINC00106
HG00642_chrY	CAT	exon	1255276	1255475	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000105;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=exon:HG00642_ch_T0000105:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1255476	1257075	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000105;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=intron:HG00642_ch_T0000105:0;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257076	1257209	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000105;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=exon:HG00642_ch_T0000105:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1257210	1257617	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000105;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=intron:HG00642_ch_T0000105:1;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1257618	1257653	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00642_ch_T0000105;gene_id=HG00642_ch_G0000029;Parent=HG00642_ch_T0000105;transcript_name=HG00642_ch_T0000105;gene_name=LINC00106;ID=exon:HG00642_ch_T0000105:2;Name=LINC00106;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1259679	1270348	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=ENSG00000292331.2;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;gene_id=HG00642_ch_G0000030;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG00642_ch_G0000030;Name=ASMTL-AS1
HG00642_chrY	CAT	transcript	1259679	1270348	1000	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000106;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1259679	1259835	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000106:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1259836	1260272	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000106:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1260273	1260474	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000106:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000106:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000106:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000106:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269211	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000106:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1270072	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000106:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1270073	1270348	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00642_ch_T0000106;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000106;transcript_name=HG00642_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000106:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1259714	1269910	1000	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000107;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1259714	1259835	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000107:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1259836	1260272	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000107:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1260273	1260474	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000107:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000107:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000107:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000107:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269211	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000107:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1269544	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000107:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269545	1269910	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.582;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00642_ch_T0000107;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000107;transcript_name=HG00642_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000107:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1259714	1269476	1000	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000108;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1259714	1259835	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000108:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1259836	1260272	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000108:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1260273	1260474	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000108:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000108:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000108:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000108:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269476	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.072;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00642_ch_T0000108;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000108;transcript_name=HG00642_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000108:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1259724	1270348	1000	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000109;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1259724	1259835	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000109:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1259836	1260272	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000109:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1260273	1260474	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000109:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000109:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000109:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000109:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269211	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000109:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1270085	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000109:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1270086	1270348	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00642_ch_T0000109;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000109;transcript_name=HG00642_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000109:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1260018	1261607	1000	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00642_ch_T0000110;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000110;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000110;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1260018	1260474	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00642_ch_T0000110;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000110;transcript_name=HG00642_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000110:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261490	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00642_ch_T0000110;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000110;transcript_name=HG00642_ch_T0000110;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000110:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261491	1261607	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00642_ch_T0000110;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000110;transcript_name=HG00642_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000110:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1260060	1270239	1000	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000111;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1260060	1260474	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000111:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000111:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000111:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000111:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269211	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000111:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1270085	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000111:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1270086	1270239	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.762;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00642_ch_T0000111;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000111;transcript_name=HG00642_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000111:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1260225	1269910	1000	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000112;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1260225	1260474	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000112;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000112:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1260475	1261574	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000112;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000112:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1261575	1261699	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000112;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000112:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000112;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000112:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269910	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.18;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00642_ch_T0000112;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000112;transcript_name=HG00642_ch_T0000112;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000112:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261295	1269910	1000	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00642_ch_T0000118;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000118;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000118;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1261295	1261699	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00642_ch_T0000118;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000118;transcript_name=HG00642_ch_T0000118;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00642_ch_T0000118;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000118;transcript_name=HG00642_ch_T0000118;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269910	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00642_ch_T0000118;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000118;transcript_name=HG00642_ch_T0000118;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000118:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261573	1270352	1000	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000119;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1261573	1261699	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000119;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269065	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000119;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269066	1269211	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000119;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1270072	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000119;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1270073	1270352	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.819;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00642_ch_T0000119;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000119;transcript_name=HG00642_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261624	1270348	1000	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_G0000030;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=HG00642_ch_T0000120;Name=ASMTL-AS1
HG00642_chrY	CAT	exon	1261624	1261699	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000120;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261700	1269113	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000120;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269114	1269211	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000120;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269212	1270087	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000120;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=intron:HG00642_ch_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1270088	1270348	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00642_ch_T0000120;gene_id=HG00642_ch_G0000030;Parent=HG00642_ch_T0000120;transcript_name=HG00642_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00642_ch_T0000120:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1261253	1311072	.	-	.	source_gene_common_name=ASMTL;source_gene=ENSG00000292339.1;gene_id=HG00642_ch_G0000031;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG00642_ch_G0000031;Name=ASMTL
HG00642_chrY	CAT	transcript	1261253	1310493	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=HG00642_ch_T0000113;Name=ASMTL
HG00642_chrY	CAT	exon	1261253	1261603	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1261383	1261603	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1261383	1261385	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=stop_codon:HG00642_ch_T0000113;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261604	1269054	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269055	1269177	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1269055	1269177	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269178	1274285	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1274286	1274429	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1274286	1274429	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1274430	1275294	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1275295	1275427	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1275295	1275427	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1275428	1277970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1277971	1278155	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1277971	1278155	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1278156	1281790	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1281791	1281953	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1281791	1281953	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1281954	1284003	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1284004	1284391	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1284004	1284391	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1288558	1288666	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1291581	1291642	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1292253	1292317	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1292318	1295655	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1295656	1295703	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1295656	1295703	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1295704	1298744	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1298745	1298876	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1298745	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1298793	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=start_codon:HG00642_ch_T0000113;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1310006	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1310007	1310143	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1310144	1310485	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=intron:HG00642_ch_T0000113:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1310486	1310493	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000113;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000113;transcript_name=HG00642_ch_T0000113;gene_name=ASMTL;ID=exon:HG00642_ch_T0000113:13;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261253	1309298	100	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=HG00642_ch_T0000114;Name=ASMTL
HG00642_chrY	CAT	exon	1261253	1261603	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1261383	1261603	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1261383	1261385	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=stop_codon:HG00642_ch_T0000114;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261604	1269054	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269055	1269177	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1269055	1269177	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269178	1274285	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1274286	1274429	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1274286	1274429	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1274430	1275294	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1275295	1275427	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1275295	1275427	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1275428	1277970	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1277971	1278155	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1277971	1278155	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1278156	1281790	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1281791	1281953	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1281791	1281953	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1281954	1284003	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1284004	1284391	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1284004	1284391	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1288558	1288666	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1291581	1291642	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292317	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1292253	1292317	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1292318	1295655	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1295656	1295703	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1295656	1295703	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1295704	1298744	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1298745	1298876	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1298745	1298876	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1309136	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=intron:HG00642_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1309137	1309298	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=exon:HG00642_ch_T0000114:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1309137	1309229	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000114:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1309227	1309229	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG00642_ch_T0000114;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000114;transcript_name=HG00642_ch_T0000114;gene_name=ASMTL;ID=start_codon:HG00642_ch_T0000114;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261253	1311072	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=HG00642_ch_T0000115;Name=ASMTL
HG00642_chrY	CAT	exon	1261253	1261603	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1261383	1261603	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1261383	1261385	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=stop_codon:HG00642_ch_T0000115;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261604	1269054	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269055	1269177	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1269055	1269177	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269178	1274285	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1274286	1274429	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1274286	1274429	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1274430	1275294	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1275295	1275427	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1275295	1275427	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1275428	1277970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1277971	1278155	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1277971	1278155	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1278156	1281790	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1281791	1281953	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1281791	1281953	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1281954	1284003	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1284004	1284391	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1284004	1284391	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1288558	1288666	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1291581	1291642	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1292253	1292317	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1292318	1295655	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1295656	1295703	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1295656	1295703	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1295704	1298744	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1298745	1298876	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1298745	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1298793	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=start_codon:HG00642_ch_T0000115;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1310006	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1310007	1310127	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1310128	1311048	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=intron:HG00642_ch_T0000115:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1311049	1311072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000115;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000115;transcript_name=HG00642_ch_T0000115;gene_name=ASMTL;ID=exon:HG00642_ch_T0000115:13;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261253	1310151	100	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=HG00642_ch_T0000116;Name=ASMTL
HG00642_chrY	CAT	exon	1261253	1261603	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1261383	1261603	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1261383	1261385	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=stop_codon:HG00642_ch_T0000116;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261604	1269054	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269055	1269177	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1269055	1269177	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269178	1274285	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1274286	1274429	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1274286	1274429	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1274430	1275294	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1275295	1275427	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1275295	1275427	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1275428	1277970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1277971	1278155	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1277971	1278155	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1278156	1281790	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1281791	1281953	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1281791	1281953	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1281954	1284003	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1284004	1284391	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1284004	1284391	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1288558	1288666	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1291581	1291642	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1292253	1292317	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1292318	1295655	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1295656	1295703	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1295656	1295703	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1295704	1298744	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1298745	1298876	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1298745	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1298793	1298795	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=start_codon:HG00642_ch_T0000116;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1310006	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=intron:HG00642_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1310007	1310151	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00642_ch_T0000116;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000116;transcript_name=HG00642_ch_T0000116;gene_name=ASMTL;ID=exon:HG00642_ch_T0000116:12;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1261255	1309318	100	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=HG00642_ch_T0000117;Name=ASMTL
HG00642_chrY	CAT	exon	1261255	1261603	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1261383	1261603	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1261383	1261385	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=stop_codon:HG00642_ch_T0000117;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1261604	1269054	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1269055	1269177	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1269055	1269177	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1269178	1274285	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1274286	1274429	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1274286	1274429	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1274430	1275294	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1275295	1275427	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1275295	1275427	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1275428	1277970	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1277971	1278155	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1277971	1278155	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1278156	1281790	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1281791	1281953	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1281791	1281953	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1281954	1284003	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1284004	1284391	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1284004	1284391	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1288558	1288666	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1291581	1291642	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292317	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1292253	1292317	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1292318	1298744	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1298745	1298876	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1298745	1298876	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1309136	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=intron:HG00642_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1309137	1309318	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=exon:HG00642_ch_T0000117:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1309137	1309229	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00642_ch_T0000117:11;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1309227	1309229	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG00642_ch_T0000117;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000117;transcript_name=HG00642_ch_T0000117;gene_name=ASMTL;ID=start_codon:HG00642_ch_T0000117;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1283997	1291950	1000	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=HG00642_ch_T0000121;Name=ASMTL
HG00642_chrY	CAT	exon	1283997	1284391	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000121;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=exon:HG00642_ch_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1284392	1288557	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000121;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=intron:HG00642_ch_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1288558	1288666	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000121;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=exon:HG00642_ch_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000121;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=intron:HG00642_ch_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291950	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.771;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00642_ch_T0000121;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000121;transcript_name=HG00642_ch_T0000121;gene_name=ASMTL;ID=exon:HG00642_ch_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1288191	1292287	1000	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=HG00642_ch_T0000122;Name=ASMTL
HG00642_chrY	CAT	exon	1288191	1288666	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000122;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=exon:HG00642_ch_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1288667	1291580	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000122;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=intron:HG00642_ch_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1291581	1291642	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000122;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=exon:HG00642_ch_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1291643	1292252	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000122;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=intron:HG00642_ch_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1292253	1292287	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00642_ch_T0000122;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000122;transcript_name=HG00642_ch_T0000122;gene_name=ASMTL;ID=exon:HG00642_ch_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1298151	1309261	1000	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00642_ch_T0000123;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_G0000031;transcript_name=HG00642_ch_T0000123;gene_name=ASMTL;ID=HG00642_ch_T0000123;Name=ASMTL
HG00642_chrY	CAT	exon	1298151	1298876	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00642_ch_T0000123;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000123;transcript_name=HG00642_ch_T0000123;gene_name=ASMTL;ID=exon:HG00642_ch_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1298877	1309136	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00642_ch_T0000123;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000123;transcript_name=HG00642_ch_T0000123;gene_name=ASMTL;ID=intron:HG00642_ch_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1309137	1309261	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00642_ch_T0000123;gene_id=HG00642_ch_G0000031;Parent=HG00642_ch_T0000123;transcript_name=HG00642_ch_T0000123;gene_name=ASMTL;ID=exon:HG00642_ch_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1319906	1394571	.	-	.	source_gene_common_name=P2RY8;source_gene=ENSG00000292333.1;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;gene_id=HG00642_ch_G0000032;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff;ID=HG00642_ch_G0000032;Name=P2RY8
HG00642_chrY	CAT	transcript	1319906	1394571	100	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_G0000032;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=HG00642_ch_T0000124;Name=P2RY8
HG00642_chrY	CAT	exon	1319906	1323908	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=exon:HG00642_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1322805	1323884	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=CDS:HG00642_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1322805	1322807	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=stop_codon:HG00642_ch_T0000124;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1323882	1323884	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=start_codon:HG00642_ch_T0000124;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1323909	1394306	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=intron:HG00642_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1394307	1394571	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00642_ch_T0000124;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000124;transcript_name=HG00642_ch_T0000124;gene_name=P2RY8;ID=exon:HG00642_ch_T0000124:1;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1323763	1352035	100	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_G0000032;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=HG00642_ch_T0000125;Name=P2RY8
HG00642_chrY	CAT	exon	1323763	1323908	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000125;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=exon:HG00642_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1323763	1323884	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000125;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=CDS:HG00642_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1323882	1323884	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000125;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=start_codon:HG00642_ch_T0000125;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1323909	1351774	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000125;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=intron:HG00642_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1351775	1352035	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00642_ch_T0000125;gene_id=HG00642_ch_G0000032;Parent=HG00642_ch_T0000125;transcript_name=HG00642_ch_T0000125;gene_name=P2RY8;ID=exon:HG00642_ch_T0000125:1;Name=P2RY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1410164	1422439	.	-	.	source_gene_common_name=ENSG00000310546;source_gene=ENSG00000310546.1;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;gene_id=HG00642_ch_G0000033;gene_biotype=lncRNA;gene_name=ENSG00000310546;gene_sources=liftoff;ID=HG00642_ch_G0000033;Name=ENSG00000310546
HG00642_chrY	CAT	transcript	1410164	1422439	1000	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00642_ch_T0000126;gene_id=HG00642_ch_G0000033;Parent=HG00642_ch_G0000033;transcript_name=HG00642_ch_T0000126;gene_name=ENSG00000310546;ID=HG00642_ch_T0000126;Name=ENSG00000310546
HG00642_chrY	CAT	exon	1410164	1410777	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00642_ch_T0000126;gene_id=HG00642_ch_G0000033;Parent=HG00642_ch_T0000126;transcript_name=HG00642_ch_T0000126;gene_name=ENSG00000310546;ID=exon:HG00642_ch_T0000126:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1410778	1422337	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00642_ch_T0000126;gene_id=HG00642_ch_G0000033;Parent=HG00642_ch_T0000126;transcript_name=HG00642_ch_T0000126;gene_name=ENSG00000310546;ID=intron:HG00642_ch_T0000126:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1422338	1422439	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00642_ch_T0000126;gene_id=HG00642_ch_G0000033;Parent=HG00642_ch_T0000126;transcript_name=HG00642_ch_T0000126;gene_name=ENSG00000310546;ID=exon:HG00642_ch_T0000126:1;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1448777	1459853	.	+	.	source_gene_common_name=AKAP17A;source_gene=ENSG00000292343.1;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;gene_id=HG00642_ch_G0000034;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff;ID=HG00642_ch_G0000034;Name=AKAP17A
HG00642_chrY	CAT	transcript	1448777	1459853	100	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_G0000034;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=HG00642_ch_T0000127;Name=AKAP17A
HG00642_chrY	CAT	exon	1448777	1448942	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1448943	1450616	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1450617	1451397	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1450636	1451397	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1450636	1450638	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=start_codon:HG00642_ch_T0000127;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1451398	1452556	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1452557	1452705	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1452557	1452705	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1452706	1456524	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1456525	1456765	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1456525	1456765	.	+	1	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1456766	1457991	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1457992	1459853	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000127:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1457992	1458927	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1458925	1458927	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00642_ch_T0000127;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000127;transcript_name=HG00642_ch_T0000127;gene_name=AKAP17A;ID=stop_codon:HG00642_ch_T0000127;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1448796	1459835	1000	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_G0000034;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=HG00642_ch_T0000128;Name=AKAP17A
HG00642_chrY	CAT	exon	1448796	1448942	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1448943	1450616	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1450617	1451397	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1450636	1451397	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1450636	1450638	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=start_codon:HG00642_ch_T0000128;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1451398	1452556	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1452557	1452705	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1452557	1452705	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1452706	1456524	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1456525	1456765	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1456525	1456765	.	+	1	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1456766	1457470	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1457471	1457540	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1457471	1457476	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1457474	1457476	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=stop_codon:HG00642_ch_T0000128;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1457541	1457991	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000128:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1457992	1459835	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00642_ch_T0000128;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000128;transcript_name=HG00642_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000128:5;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1448798	1457636	100	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_G0000034;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=HG00642_ch_T0000129;Name=AKAP17A
HG00642_chrY	CAT	exon	1448798	1448942	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1448943	1450616	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1450617	1451397	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1450636	1451397	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1450636	1450638	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=start_codon:HG00642_ch_T0000129;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1451398	1452556	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1452557	1452705	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1452557	1452705	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1452706	1456524	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00642_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1456525	1457636	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00642_ch_T0000129:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1456525	1456954	.	+	1	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00642_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1456952	1456954	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00642_ch_T0000129;gene_id=HG00642_ch_G0000034;Parent=HG00642_ch_T0000129;transcript_name=HG00642_ch_T0000129;gene_name=AKAP17A;ID=stop_codon:HG00642_ch_T0000129;Name=AKAP17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1472061	1497296	.	+	.	source_gene_common_name=ASMT;source_gene=ENSG00000292336.1;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;gene_id=HG00642_ch_G0000035;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff;ID=HG00642_ch_G0000035;Name=ASMT
HG00642_chrY	CAT	transcript	1472061	1497296	100	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_G0000035;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=HG00642_ch_T0000130;Name=ASMT
HG00642_chrY	CAT	exon	1472061	1472270	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1472202	1472270	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1472202	1472204	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=start_codon:HG00642_ch_T0000130;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1472271	1480140	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1480141	1480315	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1480141	1480315	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1480316	1481270	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1481271	1481400	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1481271	1481400	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1481401	1484710	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1484711	1484779	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1484711	1484779	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1484780	1486828	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1486829	1486947	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1486829	1486947	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1486948	1489715	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1489716	1489799	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1489716	1489799	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1489800	1490160	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1490161	1490301	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1490161	1490301	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1490302	1493448	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1493449	1493571	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1493449	1493571	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1493572	1497017	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=intron:HG00642_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1497018	1497296	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=exon:HG00642_ch_T0000130:8;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1497018	1497229	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=CDS:HG00642_ch_T0000130:8;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1497227	1497229	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00642_ch_T0000130;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000130;transcript_name=HG00642_ch_T0000130;gene_name=ASMT;ID=stop_codon:HG00642_ch_T0000130;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1472166	1497242	100	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_G0000035;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=HG00642_ch_T0000131;Name=ASMT
HG00642_chrY	CAT	exon	1472166	1472270	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1472202	1472270	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1472202	1472204	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=start_codon:HG00642_ch_T0000131;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1472271	1480140	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1480141	1480315	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1480141	1480315	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1480316	1481270	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1481271	1481400	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1481271	1481400	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1481401	1484710	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1484711	1484779	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1484711	1484779	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1484780	1486828	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1486829	1486947	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1486829	1486947	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1486948	1490160	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1490161	1490301	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1490161	1490301	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1490302	1493448	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1493449	1493571	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1493449	1493571	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1493572	1497017	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=intron:HG00642_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1497018	1497242	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=exon:HG00642_ch_T0000131:7;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1497018	1497229	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=CDS:HG00642_ch_T0000131:7;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1497227	1497229	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00642_ch_T0000131;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000131;transcript_name=HG00642_ch_T0000131;gene_name=ASMT;ID=stop_codon:HG00642_ch_T0000131;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1472177	1497296	100	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_G0000035;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=HG00642_ch_T0000132;Name=ASMT
HG00642_chrY	CAT	exon	1472177	1472270	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1472202	1472270	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1472202	1472204	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=start_codon:HG00642_ch_T0000132;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1472271	1480140	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1480141	1480315	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1480141	1480315	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1480316	1481270	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1481271	1481400	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1481271	1481400	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1481401	1484710	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1484711	1484779	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1484711	1484779	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1484780	1486828	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1486829	1486947	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1486829	1486947	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1486948	1493448	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1493449	1493571	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1493449	1493571	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1493572	1497017	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=intron:HG00642_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1497018	1497296	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=exon:HG00642_ch_T0000132:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1497018	1497229	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=CDS:HG00642_ch_T0000132:6;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1497227	1497229	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00642_ch_T0000132;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000132;transcript_name=HG00642_ch_T0000132;gene_name=ASMT;ID=stop_codon:HG00642_ch_T0000132;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1484754	1493474	1000	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00642_ch_T0000133;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_G0000035;transcript_name=HG00642_ch_T0000133;gene_name=ASMT;ID=HG00642_ch_T0000133;Name=ASMT
HG00642_chrY	CAT	exon	1484754	1485041	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00642_ch_T0000133;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000133;transcript_name=HG00642_ch_T0000133;gene_name=ASMT;ID=exon:HG00642_ch_T0000133:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1485042	1493252	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00642_ch_T0000133;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000133;transcript_name=HG00642_ch_T0000133;gene_name=ASMT;ID=intron:HG00642_ch_T0000133:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1493253	1493474	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00642_ch_T0000133;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000133;transcript_name=HG00642_ch_T0000133;gene_name=ASMT;ID=exon:HG00642_ch_T0000133:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1493409	1497296	100	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_G0000035;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=HG00642_ch_T0000134;Name=ASMT
HG00642_chrY	CAT	exon	1493409	1493571	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=exon:HG00642_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1493409	1493571	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=CDS:HG00642_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1493572	1497017	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=intron:HG00642_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1497018	1497296	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=exon:HG00642_ch_T0000134:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1497018	1497229	.	+	2	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=CDS:HG00642_ch_T0000134:1;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1497227	1497229	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00642_ch_T0000134;gene_id=HG00642_ch_G0000035;Parent=HG00642_ch_T0000134;transcript_name=HG00642_ch_T0000134;gene_name=ASMT;ID=stop_codon:HG00642_ch_T0000134;Name=ASMT;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1511948	1626030	.	+	.	source_gene_common_name=LINC02968;source_gene=ENSG00000310540.2;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;gene_id=HG00642_ch_G0000036;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000036;Name=LINC02968
HG00642_chrY	CAT	transcript	1511948	1586045	1000	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=HG00642_ch_T0000135;Name=LINC02968
HG00642_chrY	CAT	exon	1511948	1512084	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000135;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=exon:HG00642_ch_T0000135:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1581070	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000135;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=intron:HG00642_ch_T0000135:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000135;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=exon:HG00642_ch_T0000135:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1585879	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000135;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=intron:HG00642_ch_T0000135:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1585880	1586045	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00642_ch_T0000135;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000135;transcript_name=HG00642_ch_T0000135;gene_name=LINC02968;ID=exon:HG00642_ch_T0000135:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511953	1614209	1000	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=HG00642_ch_T0000136;Name=LINC02968
HG00642_chrY	CAT	exon	1511953	1512084	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000136;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=exon:HG00642_ch_T0000136:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1581070	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000136;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=intron:HG00642_ch_T0000136:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000136;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=exon:HG00642_ch_T0000136:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1614017	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000136;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=intron:HG00642_ch_T0000136:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614209	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00642_ch_T0000136;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000136;transcript_name=HG00642_ch_T0000136;gene_name=LINC02968;ID=exon:HG00642_ch_T0000136:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511953	1512651	1000	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG00642_ch_T0000137;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000137;gene_name=LINC02968;ID=HG00642_ch_T0000137;Name=LINC02968
HG00642_chrY	CAT	exon	1511953	1512651	.	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG00642_ch_T0000137;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000137;transcript_name=HG00642_ch_T0000137;gene_name=LINC02968;ID=exon:HG00642_ch_T0000137:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511955	1515127	1000	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.88599999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00642_ch_T0000138;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000138;gene_name=LINC02968;ID=HG00642_ch_T0000138;Name=LINC02968
HG00642_chrY	CAT	exon	1511955	1512084	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00642_ch_T0000138;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000138;transcript_name=HG00642_ch_T0000138;gene_name=LINC02968;ID=exon:HG00642_ch_T0000138:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1514360	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00642_ch_T0000138;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000138;transcript_name=HG00642_ch_T0000138;gene_name=LINC02968;ID=intron:HG00642_ch_T0000138:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1514361	1515127	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00642_ch_T0000138;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000138;transcript_name=HG00642_ch_T0000138;gene_name=LINC02968;ID=exon:HG00642_ch_T0000138:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511956	1515124	1000	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.869;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00642_ch_T0000139;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000139;gene_name=LINC02968;ID=HG00642_ch_T0000139;Name=LINC02968
HG00642_chrY	CAT	exon	1511956	1512084	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00642_ch_T0000139;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000139;transcript_name=HG00642_ch_T0000139;gene_name=LINC02968;ID=exon:HG00642_ch_T0000139:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1514469	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00642_ch_T0000139;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000139;transcript_name=HG00642_ch_T0000139;gene_name=LINC02968;ID=intron:HG00642_ch_T0000139:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1514470	1515124	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00642_ch_T0000139;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000139;transcript_name=HG00642_ch_T0000139;gene_name=LINC02968;ID=exon:HG00642_ch_T0000139:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511958	1618579	1000	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=HG00642_ch_T0000140;Name=LINC02968
HG00642_chrY	CAT	exon	1511958	1512084	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=exon:HG00642_ch_T0000140:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1581070	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=intron:HG00642_ch_T0000140:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=exon:HG00642_ch_T0000140:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1614017	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=intron:HG00642_ch_T0000140:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614077	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=exon:HG00642_ch_T0000140:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1614078	1618414	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=intron:HG00642_ch_T0000140:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1618415	1618579	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00642_ch_T0000140;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000140;transcript_name=HG00642_ch_T0000140;gene_name=LINC02968;ID=exon:HG00642_ch_T0000140:3;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511959	1516539	1000	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00642_ch_T0000141;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000141;gene_name=LINC02968;ID=HG00642_ch_T0000141;Name=LINC02968
HG00642_chrY	CAT	exon	1511959	1512084	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00642_ch_T0000141;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000141;transcript_name=HG00642_ch_T0000141;gene_name=LINC02968;ID=exon:HG00642_ch_T0000141:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1516393	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00642_ch_T0000141;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000141;transcript_name=HG00642_ch_T0000141;gene_name=LINC02968;ID=intron:HG00642_ch_T0000141:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1516394	1516539	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00642_ch_T0000141;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000141;transcript_name=HG00642_ch_T0000141;gene_name=LINC02968;ID=exon:HG00642_ch_T0000141:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511973	1515079	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG00642_ch_T0000142;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000142;gene_name=LINC02968;ID=HG00642_ch_T0000142;Name=LINC02968
HG00642_chrY	CAT	exon	1511973	1512084	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG00642_ch_T0000142;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000142;transcript_name=HG00642_ch_T0000142;gene_name=LINC02968;ID=exon:HG00642_ch_T0000142:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1514472	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG00642_ch_T0000142;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000142;transcript_name=HG00642_ch_T0000142;gene_name=LINC02968;ID=intron:HG00642_ch_T0000142:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1514473	1515079	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG00642_ch_T0000142;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000142;transcript_name=HG00642_ch_T0000142;gene_name=LINC02968;ID=exon:HG00642_ch_T0000142:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511973	1515099	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG00642_ch_T0000143;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000143;gene_name=LINC02968;ID=HG00642_ch_T0000143;Name=LINC02968
HG00642_chrY	CAT	exon	1511973	1512084	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG00642_ch_T0000143;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000143;transcript_name=HG00642_ch_T0000143;gene_name=LINC02968;ID=exon:HG00642_ch_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1514472	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG00642_ch_T0000143;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000143;transcript_name=HG00642_ch_T0000143;gene_name=LINC02968;ID=intron:HG00642_ch_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1514473	1515099	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG00642_ch_T0000143;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000143;transcript_name=HG00642_ch_T0000143;gene_name=LINC02968;ID=exon:HG00642_ch_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511975	1531608	1000	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=HG00642_ch_T0000144;Name=LINC02968
HG00642_chrY	CAT	exon	1511975	1512084	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000144;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=exon:HG00642_ch_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1516393	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000144;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=intron:HG00642_ch_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1516394	1516504	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000144;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=exon:HG00642_ch_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516505	1531415	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000144;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=intron:HG00642_ch_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1531416	1531608	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00642_ch_T0000144;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000144;transcript_name=HG00642_ch_T0000144;gene_name=LINC02968;ID=exon:HG00642_ch_T0000144:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511975	1516706	1000	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=HG00642_ch_T0000145;Name=LINC02968
HG00642_chrY	CAT	exon	1511975	1512084	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000145;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=exon:HG00642_ch_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1515962	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000145;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=intron:HG00642_ch_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1515963	1516285	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000145;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=exon:HG00642_ch_T0000145:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1516393	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000145;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=intron:HG00642_ch_T0000145:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1516394	1516706	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00642_ch_T0000145;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000145;transcript_name=HG00642_ch_T0000145;gene_name=LINC02968;ID=exon:HG00642_ch_T0000145:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1511989	1518698	1000	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=HG00642_ch_T0000146;Name=LINC02968
HG00642_chrY	CAT	exon	1511989	1512084	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000146;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=exon:HG00642_ch_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1516393	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000146;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=intron:HG00642_ch_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1516394	1516504	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000146;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=exon:HG00642_ch_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516505	1518404	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000146;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=intron:HG00642_ch_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1518405	1518698	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00642_ch_T0000146;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000146;transcript_name=HG00642_ch_T0000146;gene_name=LINC02968;ID=exon:HG00642_ch_T0000146:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1512016	1626030	1000	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=HG00642_ch_T0000147;Name=LINC02968
HG00642_chrY	CAT	exon	1512016	1512084	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=exon:HG00642_ch_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1512085	1581070	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=intron:HG00642_ch_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=exon:HG00642_ch_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1618414	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=intron:HG00642_ch_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1618415	1618716	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=exon:HG00642_ch_T0000147:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1618717	1625676	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=intron:HG00642_ch_T0000147:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1625677	1626030	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00642_ch_T0000147;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000147;transcript_name=HG00642_ch_T0000147;gene_name=LINC02968;ID=exon:HG00642_ch_T0000147:3;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516028	1586046	1000	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=HG00642_ch_T0000148;Name=LINC02968
HG00642_chrY	CAT	exon	1516028	1516285	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000148;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=exon:HG00642_ch_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000148;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=intron:HG00642_ch_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000148;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=exon:HG00642_ch_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1585879	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000148;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=intron:HG00642_ch_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1585880	1586046	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00642_ch_T0000148;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000148;transcript_name=HG00642_ch_T0000148;gene_name=LINC02968;ID=exon:HG00642_ch_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516028	1586044	1000	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=HG00642_ch_T0000149;Name=LINC02968
HG00642_chrY	CAT	exon	1516028	1516285	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=exon:HG00642_ch_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=intron:HG00642_ch_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=exon:HG00642_ch_T0000149:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1581321	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=intron:HG00642_ch_T0000149:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581322	1581494	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=exon:HG00642_ch_T0000149:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581495	1585879	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=intron:HG00642_ch_T0000149:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1585880	1586044	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00642_ch_T0000149;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000149;transcript_name=HG00642_ch_T0000149;gene_name=LINC02968;ID=exon:HG00642_ch_T0000149:3;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516028	1516539	1000	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00642_ch_T0000150;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000150;gene_name=LINC02968;ID=HG00642_ch_T0000150;Name=LINC02968
HG00642_chrY	CAT	exon	1516028	1516285	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00642_ch_T0000150;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000150;transcript_name=HG00642_ch_T0000150;gene_name=LINC02968;ID=exon:HG00642_ch_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1516393	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00642_ch_T0000150;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000150;transcript_name=HG00642_ch_T0000150;gene_name=LINC02968;ID=intron:HG00642_ch_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1516394	1516539	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00642_ch_T0000150;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000150;transcript_name=HG00642_ch_T0000150;gene_name=LINC02968;ID=exon:HG00642_ch_T0000150:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516039	1581535	1000	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=HG00642_ch_T0000151;Name=LINC02968
HG00642_chrY	CAT	exon	1516039	1516285	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000151;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=exon:HG00642_ch_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000151;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=intron:HG00642_ch_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000151;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=exon:HG00642_ch_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1581321	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000151;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=intron:HG00642_ch_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581322	1581535	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00642_ch_T0000151;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000151;transcript_name=HG00642_ch_T0000151;gene_name=LINC02968;ID=exon:HG00642_ch_T0000151:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516056	1614208	1000	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=HG00642_ch_T0000152;Name=LINC02968
HG00642_chrY	CAT	exon	1516056	1516285	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000152;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=exon:HG00642_ch_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000152;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=intron:HG00642_ch_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000152;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=exon:HG00642_ch_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1614017	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000152;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=intron:HG00642_ch_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614208	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00642_ch_T0000152;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000152;transcript_name=HG00642_ch_T0000152;gene_name=LINC02968;ID=exon:HG00642_ch_T0000152:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516079	1618661	1000	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=HG00642_ch_T0000153;Name=LINC02968
HG00642_chrY	CAT	exon	1516079	1516285	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=exon:HG00642_ch_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=intron:HG00642_ch_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=exon:HG00642_ch_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1614017	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=intron:HG00642_ch_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614077	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=exon:HG00642_ch_T0000153:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1614078	1618414	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=intron:HG00642_ch_T0000153:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1618415	1618661	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00642_ch_T0000153;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000153;transcript_name=HG00642_ch_T0000153;gene_name=LINC02968;ID=exon:HG00642_ch_T0000153:3;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516079	1586044	1000	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=HG00642_ch_T0000154;Name=LINC02968
HG00642_chrY	CAT	exon	1516079	1516324	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000154;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=exon:HG00642_ch_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516325	1581070	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000154;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=intron:HG00642_ch_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000154;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=exon:HG00642_ch_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1585879	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000154;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=intron:HG00642_ch_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1585880	1586044	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00642_ch_T0000154;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000154;transcript_name=HG00642_ch_T0000154;gene_name=LINC02968;ID=exon:HG00642_ch_T0000154:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1516081	1614207	1000	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=HG00642_ch_T0000155;Name=LINC02968
HG00642_chrY	CAT	exon	1516081	1516285	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=exon:HG00642_ch_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1516286	1581070	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=intron:HG00642_ch_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1581071	1581158	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=exon:HG00642_ch_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1581159	1604657	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=intron:HG00642_ch_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1604658	1604753	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=exon:HG00642_ch_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1604754	1614017	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=intron:HG00642_ch_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614207	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00642_ch_T0000155;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000155;transcript_name=HG00642_ch_T0000155;gene_name=LINC02968;ID=exon:HG00642_ch_T0000155:3;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1587575	1604715	1000	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=HG00642_ch_T0000156;Name=LINC02968
HG00642_chrY	CAT	exon	1587575	1587714	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000156;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=exon:HG00642_ch_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1587715	1588941	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000156;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=intron:HG00642_ch_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1588942	1589188	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000156;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=exon:HG00642_ch_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1589189	1604657	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000156;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=intron:HG00642_ch_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1604658	1604715	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00642_ch_T0000156;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000156;transcript_name=HG00642_ch_T0000156;gene_name=LINC02968;ID=exon:HG00642_ch_T0000156:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1589109	1625930	1000	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=HG00642_ch_T0000157;Name=LINC02968
HG00642_chrY	CAT	exon	1589109	1589188	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000157;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=exon:HG00642_ch_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1589189	1618414	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000157;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=intron:HG00642_ch_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1618415	1618716	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000157;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=exon:HG00642_ch_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1618717	1625676	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000157;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=intron:HG00642_ch_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1625677	1625930	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00642_ch_T0000157;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000157;transcript_name=HG00642_ch_T0000157;gene_name=LINC02968;ID=exon:HG00642_ch_T0000157:2;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1613388	1614554	1000	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00642_ch_T0000158;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000158;gene_name=LINC02968;ID=HG00642_ch_T0000158;Name=LINC02968
HG00642_chrY	CAT	exon	1613388	1613553	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00642_ch_T0000158;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000158;transcript_name=HG00642_ch_T0000158;gene_name=LINC02968;ID=exon:HG00642_ch_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1613554	1614017	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00642_ch_T0000158;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000158;transcript_name=HG00642_ch_T0000158;gene_name=LINC02968;ID=intron:HG00642_ch_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1614018	1614554	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00642_ch_T0000158;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000158;transcript_name=HG00642_ch_T0000158;gene_name=LINC02968;ID=exon:HG00642_ch_T0000158:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1613835	1618660	1000	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00642_ch_T0000159;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_G0000036;transcript_name=HG00642_ch_T0000159;gene_name=LINC02968;ID=HG00642_ch_T0000159;Name=LINC02968
HG00642_chrY	CAT	exon	1613835	1613913	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00642_ch_T0000159;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000159;transcript_name=HG00642_ch_T0000159;gene_name=LINC02968;ID=exon:HG00642_ch_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1613914	1618414	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00642_ch_T0000159;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000159;transcript_name=HG00642_ch_T0000159;gene_name=LINC02968;ID=intron:HG00642_ch_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1618415	1618660	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00642_ch_T0000159;gene_id=HG00642_ch_G0000036;Parent=HG00642_ch_T0000159;transcript_name=HG00642_ch_T0000159;gene_name=LINC02968;ID=exon:HG00642_ch_T0000159:1;Name=LINC02968;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1629090	1630518	.	+	.	source_gene_common_name=ENSG00000292330;source_gene=ENSG00000292330.1;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;gene_id=HG00642_ch_G0000037;gene_biotype=lncRNA;gene_name=ENSG00000292330;gene_sources=liftoff;ID=HG00642_ch_G0000037;Name=ENSG00000292330
HG00642_chrY	CAT	transcript	1629090	1630518	1000	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=297.446;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00642_ch_T0000160;gene_id=HG00642_ch_G0000037;Parent=HG00642_ch_G0000037;transcript_name=HG00642_ch_T0000160;gene_name=ENSG00000292330;ID=HG00642_ch_T0000160;Name=ENSG00000292330
HG00642_chrY	CAT	exon	1629090	1629295	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=297.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00642_ch_T0000160;gene_id=HG00642_ch_G0000037;Parent=HG00642_ch_T0000160;transcript_name=HG00642_ch_T0000160;gene_name=ENSG00000292330;ID=exon:HG00642_ch_T0000160:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1629296	1630179	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=297.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00642_ch_T0000160;gene_id=HG00642_ch_G0000037;Parent=HG00642_ch_T0000160;transcript_name=HG00642_ch_T0000160;gene_name=ENSG00000292330;ID=intron:HG00642_ch_T0000160:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1630180	1630518	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=297.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00642_ch_T0000160;gene_id=HG00642_ch_G0000037;Parent=HG00642_ch_T0000160;transcript_name=HG00642_ch_T0000160;gene_name=ENSG00000292330;ID=exon:HG00642_ch_T0000160:1;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1745108	1756260	.	+	.	source_gene_common_name=ENSG00000310547;source_gene=ENSG00000310547.1;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;gene_id=HG00642_ch_G0000038;gene_biotype=lncRNA;gene_name=ENSG00000310547;gene_sources=liftoff;ID=HG00642_ch_G0000038;Name=ENSG00000310547
HG00642_chrY	CAT	transcript	1745108	1756260	1000	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_G0000038;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=HG00642_ch_T0000161;Name=ENSG00000310547
HG00642_chrY	CAT	exon	1745108	1745298	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_T0000161;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=exon:HG00642_ch_T0000161:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1745299	1755015	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_T0000161;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=intron:HG00642_ch_T0000161:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1755016	1755125	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_T0000161;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=exon:HG00642_ch_T0000161:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1755126	1755575	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_T0000161;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=intron:HG00642_ch_T0000161:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1755576	1756260	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00642_ch_T0000161;gene_id=HG00642_ch_G0000038;Parent=HG00642_ch_T0000161;transcript_name=HG00642_ch_T0000161;gene_name=ENSG00000310547;ID=exon:HG00642_ch_T0000161:2;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	1894987	2181092	.	-	.	source_gene_common_name=DHRSX;source_gene=ENSG00000292338.1;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;gene_id=HG00642_ch_G0000039;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff;ID=HG00642_ch_G0000039;Name=DHRSX
HG00642_chrY	CAT	transcript	1894987	2179263	100	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=HG00642_ch_T0000162;Name=DHRSX
HG00642_chrY	CAT	exon	1894987	1896710	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1896522	1896710	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	1896522	1896524	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=stop_codon:HG00642_ch_T0000162;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1896711	1919035	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1919036	1919243	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1919036	1919243	.	-	1	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1919244	1942979	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1942980	1943187	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1942980	1943187	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1943188	1964642	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1964643	1964744	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1964643	1964744	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1964745	2087063	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2087064	2087132	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2087064	2087132	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2087133	2103518	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:5;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2103519	2103626	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:5;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2179103	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=intron:HG00642_ch_T0000162:5;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179263	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=exon:HG00642_ch_T0000162:6;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2179104	2179212	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000162:6;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2179210	2179212	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00642_ch_T0000162;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000162;transcript_name=HG00642_ch_T0000162;gene_name=DHRSX;ID=start_codon:HG00642_ch_T0000162;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1919075	2179260	100	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=HG00642_ch_T0000163;Name=DHRSX
HG00642_chrY	CAT	exon	1919075	1919243	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=exon:HG00642_ch_T0000163:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1919075	1919243	.	-	1	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000163:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1919244	1942979	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=intron:HG00642_ch_T0000163:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1942980	1943187	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=exon:HG00642_ch_T0000163:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1942980	1943187	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000163:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1943188	1964642	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=intron:HG00642_ch_T0000163:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1964643	1964744	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=exon:HG00642_ch_T0000163:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1964643	1964744	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000163:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1964745	2103518	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=intron:HG00642_ch_T0000163:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=exon:HG00642_ch_T0000163:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2103519	2103626	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000163:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2179103	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=intron:HG00642_ch_T0000163:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179260	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=exon:HG00642_ch_T0000163:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2179104	2179212	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000163:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2179210	2179212	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00642_ch_T0000163;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000163;transcript_name=HG00642_ch_T0000163;gene_name=DHRSX;ID=start_codon:HG00642_ch_T0000163;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1937636	1943177	1000	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00642_ch_T0000164;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000164;gene_name=DHRSX;ID=HG00642_ch_T0000164;Name=DHRSX
HG00642_chrY	CAT	exon	1937636	1938009	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00642_ch_T0000164;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000164;transcript_name=HG00642_ch_T0000164;gene_name=DHRSX;ID=exon:HG00642_ch_T0000164:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1938010	1942979	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00642_ch_T0000164;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000164;transcript_name=HG00642_ch_T0000164;gene_name=DHRSX;ID=intron:HG00642_ch_T0000164:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1942980	1943177	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00642_ch_T0000164;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000164;transcript_name=HG00642_ch_T0000164;gene_name=DHRSX;ID=exon:HG00642_ch_T0000164:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1943010	2178938	100	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=HG00642_ch_T0000165;Name=DHRSX
HG00642_chrY	CAT	exon	1943010	1943187	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=exon:HG00642_ch_T0000165:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1943010	1943187	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000165:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1943188	1964642	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=intron:HG00642_ch_T0000165:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1964643	1964744	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=exon:HG00642_ch_T0000165:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1964643	1964744	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000165:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1964745	2087063	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=intron:HG00642_ch_T0000165:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2087064	2087132	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=exon:HG00642_ch_T0000165:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2087064	2087132	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000165:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2087133	2103518	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=intron:HG00642_ch_T0000165:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=exon:HG00642_ch_T0000165:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2103519	2103534	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000165:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2103532	2103534	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=start_codon:HG00642_ch_T0000165;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2178597	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=intron:HG00642_ch_T0000165:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2178598	2178938	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00642_ch_T0000165;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000165;transcript_name=HG00642_ch_T0000165;gene_name=DHRSX;ID=exon:HG00642_ch_T0000165:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1943094	2181092	1000	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=HG00642_ch_T0000166;Name=DHRSX
HG00642_chrY	CAT	exon	1943094	1943187	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1943188	1964642	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=intron:HG00642_ch_T0000166:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	1964643	1964744	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1964745	2070661	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=intron:HG00642_ch_T0000166:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2070662	2070782	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2070783	2087063	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=intron:HG00642_ch_T0000166:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2087064	2087132	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2087133	2103518	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=intron:HG00642_ch_T0000166:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2181047	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=intron:HG00642_ch_T0000166:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2181048	2181092	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00642_ch_T0000166;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000166;transcript_name=HG00642_ch_T0000166;gene_name=DHRSX;ID=exon:HG00642_ch_T0000166:5;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	1964643	2178876	100	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=HG00642_ch_T0000167;Name=DHRSX
HG00642_chrY	CAT	exon	1964643	1964744	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=exon:HG00642_ch_T0000167:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	1964643	1964715	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=CDS:HG00642_ch_T0000167:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	1964713	1964715	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=start_codon:HG00642_ch_T0000167;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	1964745	2070661	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=intron:HG00642_ch_T0000167:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2070662	2070782	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=exon:HG00642_ch_T0000167:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2070783	2087063	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=intron:HG00642_ch_T0000167:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2087064	2087132	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=exon:HG00642_ch_T0000167:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2087133	2103518	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=intron:HG00642_ch_T0000167:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=exon:HG00642_ch_T0000167:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2178597	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=intron:HG00642_ch_T0000167:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2178598	2178876	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00642_ch_T0000167;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000167;transcript_name=HG00642_ch_T0000167;gene_name=DHRSX;ID=exon:HG00642_ch_T0000167:4;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2016073	2179247	1000	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_G0000039;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=HG00642_ch_T0000169;Name=DHRSX
HG00642_chrY	CAT	exon	2016073	2016241	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=exon:HG00642_ch_T0000169:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2016242	2087063	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=intron:HG00642_ch_T0000169:0;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2087064	2087132	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=exon:HG00642_ch_T0000169:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2087133	2103518	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=intron:HG00642_ch_T0000169:1;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2103519	2103626	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=exon:HG00642_ch_T0000169:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2103627	2179103	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=intron:HG00642_ch_T0000169:2;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179247	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00642_ch_T0000169;gene_id=HG00642_ch_G0000039;Parent=HG00642_ch_T0000169;transcript_name=HG00642_ch_T0000169;gene_name=DHRSX;ID=exon:HG00642_ch_T0000169:3;Name=DHRSX;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2012537	2014652	.	-	.	source_gene_common_name=DHRSX-IT1;source_gene=ENSG00000292337.1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;gene_id=HG00642_ch_G0000040;gene_biotype=lncRNA;gene_name=DHRSX-IT1;gene_sources=liftoff;ID=HG00642_ch_G0000040;Name=DHRSX-IT1
HG00642_chrY	CAT	transcript	2012537	2014652	1000	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00642_ch_T0000168;gene_id=HG00642_ch_G0000040;Parent=HG00642_ch_G0000040;transcript_name=HG00642_ch_T0000168;gene_name=DHRSX-IT1;ID=HG00642_ch_T0000168;Name=DHRSX-IT1
HG00642_chrY	CAT	exon	2012537	2013161	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00642_ch_T0000168;gene_id=HG00642_ch_G0000040;Parent=HG00642_ch_T0000168;transcript_name=HG00642_ch_T0000168;gene_name=DHRSX-IT1;ID=exon:HG00642_ch_T0000168:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2013162	2014626	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00642_ch_T0000168;gene_id=HG00642_ch_G0000040;Parent=HG00642_ch_T0000168;transcript_name=HG00642_ch_T0000168;gene_name=DHRSX-IT1;ID=intron:HG00642_ch_T0000168:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2014627	2014652	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00642_ch_T0000168;gene_id=HG00642_ch_G0000040;Parent=HG00642_ch_T0000168;transcript_name=HG00642_ch_T0000168;gene_name=DHRSX-IT1;ID=exon:HG00642_ch_T0000168:1;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2051301	2051412	.	-	.	source_gene_common_name=ENSG00000310552;source_gene=ENSG00000310552.1;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;gene_id=HG00642_ch_G0000041;gene_biotype=lncRNA;gene_name=ENSG00000310552;gene_sources=liftoff;ID=HG00642_ch_G0000041;Name=ENSG00000310552
HG00642_chrY	CAT	transcript	2051301	2051412	1000	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=199.107;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG00642_ch_T0000170;gene_id=HG00642_ch_G0000041;Parent=HG00642_ch_G0000041;transcript_name=HG00642_ch_T0000170;gene_name=ENSG00000310552;ID=HG00642_ch_T0000170;Name=ENSG00000310552
HG00642_chrY	CAT	exon	2051301	2051412	.	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=199.107;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG00642_ch_T0000170;gene_id=HG00642_ch_G0000041;Parent=HG00642_ch_T0000170;transcript_name=HG00642_ch_T0000170;gene_name=ENSG00000310552;ID=exon:HG00642_ch_T0000170:0;Name=ENSG00000310552;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2164700	2179263	.	-	.	source_gene_common_name=ZBED1;source_gene=ENSG00000292345.1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;gene_id=HG00642_ch_G0000042;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff;ID=HG00642_ch_G0000042;Name=ZBED1
HG00642_chrY	CAT	transcript	2164700	2179254	100	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=HG00642_ch_T0000171;Name=ZBED1
HG00642_chrY	CAT	exon	2164700	2169058	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=exon:HG00642_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2166921	2169005	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=CDS:HG00642_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2166921	2166923	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=stop_codon:HG00642_ch_T0000171;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2169003	2169005	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=start_codon:HG00642_ch_T0000171;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2169059	2179103	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=intron:HG00642_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179254	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00642_ch_T0000171;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000171;transcript_name=HG00642_ch_T0000171;gene_name=ZBED1;ID=exon:HG00642_ch_T0000171:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2164700	2179254	100	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=HG00642_ch_T0000172;Name=ZBED1
HG00642_chrY	CAT	exon	2164700	2169055	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=exon:HG00642_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2166921	2169005	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=CDS:HG00642_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2166921	2166923	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=stop_codon:HG00642_ch_T0000172;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2169003	2169005	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=start_codon:HG00642_ch_T0000172;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2169056	2179103	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=intron:HG00642_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179254	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00642_ch_T0000172;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000172;transcript_name=HG00642_ch_T0000172;gene_name=ZBED1;ID=exon:HG00642_ch_T0000172:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2164721	2179263	100	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=HG00642_ch_T0000173;Name=ZBED1
HG00642_chrY	CAT	exon	2164721	2169058	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=exon:HG00642_ch_T0000173:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2166921	2169005	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=CDS:HG00642_ch_T0000173:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2166921	2166923	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=stop_codon:HG00642_ch_T0000173;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2169003	2169005	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=start_codon:HG00642_ch_T0000173;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2169059	2179103	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=intron:HG00642_ch_T0000173:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179263	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00642_ch_T0000173;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000173;transcript_name=HG00642_ch_T0000173;gene_name=ZBED1;ID=exon:HG00642_ch_T0000173:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2165268	2167257	1000	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.669;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00642_ch_T0000174;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000174;gene_name=ZBED1;ID=HG00642_ch_T0000174;Name=ZBED1
HG00642_chrY	CAT	exon	2165268	2165988	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00642_ch_T0000174;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000174;transcript_name=HG00642_ch_T0000174;gene_name=ZBED1;ID=exon:HG00642_ch_T0000174:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2165989	2167073	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00642_ch_T0000174;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000174;transcript_name=HG00642_ch_T0000174;gene_name=ZBED1;ID=intron:HG00642_ch_T0000174:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2167074	2167257	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00642_ch_T0000174;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000174;transcript_name=HG00642_ch_T0000174;gene_name=ZBED1;ID=exon:HG00642_ch_T0000174:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2166472	2178842	100	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=HG00642_ch_T0000175;Name=ZBED1
HG00642_chrY	CAT	exon	2166472	2169058	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=exon:HG00642_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2166921	2169005	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=CDS:HG00642_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2166921	2166923	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=stop_codon:HG00642_ch_T0000175;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2169003	2169005	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=start_codon:HG00642_ch_T0000175;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2169059	2178597	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=intron:HG00642_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2178598	2178842	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00642_ch_T0000175;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000175;transcript_name=HG00642_ch_T0000175;gene_name=ZBED1;ID=exon:HG00642_ch_T0000175:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2168191	2179182	100	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_G0000042;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=HG00642_ch_T0000176;Name=ZBED1
HG00642_chrY	CAT	exon	2168191	2169058	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000176;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=exon:HG00642_ch_T0000176:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2168191	2169005	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000176;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=CDS:HG00642_ch_T0000176:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2169003	2169005	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000176;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=start_codon:HG00642_ch_T0000176;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2169059	2179103	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000176;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=intron:HG00642_ch_T0000176:0;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2179104	2179182	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00642_ch_T0000176;gene_id=HG00642_ch_G0000042;Parent=HG00642_ch_T0000176;transcript_name=HG00642_ch_T0000176;gene_name=ZBED1;ID=exon:HG00642_ch_T0000176:1;Name=ZBED1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2178532	2181400	.	+	.	source_gene_common_name=ENSG00000310551;source_gene=ENSG00000310551.1;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;gene_id=HG00642_ch_G0000043;gene_biotype=lncRNA;gene_name=ENSG00000310551;gene_sources=liftoff;ID=HG00642_ch_G0000043;Name=ENSG00000310551
HG00642_chrY	CAT	transcript	2178532	2181400	1000	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00642_ch_T0000177;gene_id=HG00642_ch_G0000043;Parent=HG00642_ch_G0000043;transcript_name=HG00642_ch_T0000177;gene_name=ENSG00000310551;ID=HG00642_ch_T0000177;Name=ENSG00000310551
HG00642_chrY	CAT	exon	2178532	2178603	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00642_ch_T0000177;gene_id=HG00642_ch_G0000043;Parent=HG00642_ch_T0000177;transcript_name=HG00642_ch_T0000177;gene_name=ENSG00000310551;ID=exon:HG00642_ch_T0000177:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2178604	2181100	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00642_ch_T0000177;gene_id=HG00642_ch_G0000043;Parent=HG00642_ch_T0000177;transcript_name=HG00642_ch_T0000177;gene_name=ENSG00000310551;ID=intron:HG00642_ch_T0000177:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2181101	2181400	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00642_ch_T0000177;gene_id=HG00642_ch_G0000043;Parent=HG00642_ch_T0000177;transcript_name=HG00642_ch_T0000177;gene_name=ENSG00000310551;ID=exon:HG00642_ch_T0000177:1;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2244236	2287864	.	-	.	source_gene_common_name=LINC03112;source_gene=ENSG00000292360.2;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;gene_id=HG00642_ch_G0000044;gene_biotype=lncRNA;gene_name=LINC03112;gene_sources=liftoff;ID=HG00642_ch_G0000044;Name=LINC03112
HG00642_chrY	CAT	transcript	2244236	2287864	1000	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00642_ch_T0000178;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000178;gene_name=LINC03112;ID=HG00642_ch_T0000178;Name=LINC03112
HG00642_chrY	CAT	exon	2244236	2245506	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00642_ch_T0000178;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000178;transcript_name=HG00642_ch_T0000178;gene_name=LINC03112;ID=exon:HG00642_ch_T0000178:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2287677	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00642_ch_T0000178;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000178;transcript_name=HG00642_ch_T0000178;gene_name=LINC03112;ID=intron:HG00642_ch_T0000178:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287864	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00642_ch_T0000178;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000178;transcript_name=HG00642_ch_T0000178;gene_name=LINC03112;ID=exon:HG00642_ch_T0000178:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244238	2287777	1000	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=HG00642_ch_T0000179;Name=LINC03112
HG00642_chrY	CAT	exon	2244238	2245506	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000179;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=exon:HG00642_ch_T0000179:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000179;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=intron:HG00642_ch_T0000179:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000179;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=exon:HG00642_ch_T0000179:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2287677	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000179;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=intron:HG00642_ch_T0000179:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287777	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00642_ch_T0000179;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000179;transcript_name=HG00642_ch_T0000179;gene_name=LINC03112;ID=exon:HG00642_ch_T0000179:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244239	2287764	1000	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=HG00642_ch_T0000180;Name=LINC03112
HG00642_chrY	CAT	exon	2244239	2245506	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=exon:HG00642_ch_T0000180:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=intron:HG00642_ch_T0000180:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=exon:HG00642_ch_T0000180:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2283567	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=intron:HG00642_ch_T0000180:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283849	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=exon:HG00642_ch_T0000180:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=intron:HG00642_ch_T0000180:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287764	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00642_ch_T0000180;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000180;transcript_name=HG00642_ch_T0000180;gene_name=LINC03112;ID=exon:HG00642_ch_T0000180:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244239	2287783	1000	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=HG00642_ch_T0000181;Name=LINC03112
HG00642_chrY	CAT	exon	2244239	2245506	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=exon:HG00642_ch_T0000181:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=intron:HG00642_ch_T0000181:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=exon:HG00642_ch_T0000181:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2252271	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=intron:HG00642_ch_T0000181:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252272	2252465	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=exon:HG00642_ch_T0000181:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=intron:HG00642_ch_T0000181:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287783	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00642_ch_T0000181;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000181;transcript_name=HG00642_ch_T0000181;gene_name=LINC03112;ID=exon:HG00642_ch_T0000181:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244240	2287739	1000	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=HG00642_ch_T0000182;Name=LINC03112
HG00642_chrY	CAT	exon	2244240	2244859	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=exon:HG00642_ch_T0000182:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2244860	2245298	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=intron:HG00642_ch_T0000182:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2245299	2245506	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=exon:HG00642_ch_T0000182:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=intron:HG00642_ch_T0000182:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=exon:HG00642_ch_T0000182:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2287677	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=intron:HG00642_ch_T0000182:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287739	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00642_ch_T0000182;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000182;transcript_name=HG00642_ch_T0000182;gene_name=LINC03112;ID=exon:HG00642_ch_T0000182:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287763	1000	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=HG00642_ch_T0000183;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000183;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=exon:HG00642_ch_T0000183:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2275857	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000183;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=intron:HG00642_ch_T0000183:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2275858	2276015	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000183;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=exon:HG00642_ch_T0000183:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2276016	2287677	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000183;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=intron:HG00642_ch_T0000183:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287763	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00642_ch_T0000183;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000183;transcript_name=HG00642_ch_T0000183;gene_name=LINC03112;ID=exon:HG00642_ch_T0000183:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287740	1000	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=HG00642_ch_T0000184;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=exon:HG00642_ch_T0000184:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=intron:HG00642_ch_T0000184:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=exon:HG00642_ch_T0000184:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2252288	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=intron:HG00642_ch_T0000184:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252289	2252465	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=exon:HG00642_ch_T0000184:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=intron:HG00642_ch_T0000184:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287740	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00642_ch_T0000184;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000184;transcript_name=HG00642_ch_T0000184;gene_name=LINC03112;ID=exon:HG00642_ch_T0000184:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287768	1000	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=HG00642_ch_T0000185;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000185;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=exon:HG00642_ch_T0000185:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2283567	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000185;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=intron:HG00642_ch_T0000185:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283849	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000185;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=exon:HG00642_ch_T0000185:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000185;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=intron:HG00642_ch_T0000185:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287768	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00642_ch_T0000185;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000185;transcript_name=HG00642_ch_T0000185;gene_name=LINC03112;ID=exon:HG00642_ch_T0000185:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287766	1000	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=HG00642_ch_T0000186;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=exon:HG00642_ch_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=intron:HG00642_ch_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=exon:HG00642_ch_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2252373	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=intron:HG00642_ch_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252374	2252465	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=exon:HG00642_ch_T0000186:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=intron:HG00642_ch_T0000186:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287766	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00642_ch_T0000186;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000186;transcript_name=HG00642_ch_T0000186;gene_name=LINC03112;ID=exon:HG00642_ch_T0000186:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287750	1000	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=HG00642_ch_T0000187;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2244362	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000187;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=exon:HG00642_ch_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2244363	2245298	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000187;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=intron:HG00642_ch_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2245299	2245506	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000187;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=exon:HG00642_ch_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2287677	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000187;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=intron:HG00642_ch_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287750	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00642_ch_T0000187;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000187;transcript_name=HG00642_ch_T0000187;gene_name=LINC03112;ID=exon:HG00642_ch_T0000187:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287733	1000	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00642_ch_T0000188;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000188;gene_name=LINC03112;ID=HG00642_ch_T0000188;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00642_ch_T0000188;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000188;transcript_name=HG00642_ch_T0000188;gene_name=LINC03112;ID=exon:HG00642_ch_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2287597	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00642_ch_T0000188;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000188;transcript_name=HG00642_ch_T0000188;gene_name=LINC03112;ID=intron:HG00642_ch_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287598	2287733	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00642_ch_T0000188;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000188;transcript_name=HG00642_ch_T0000188;gene_name=LINC03112;ID=exon:HG00642_ch_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2262547	1000	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00642_ch_T0000189;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000189;gene_name=LINC03112;ID=HG00642_ch_T0000189;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00642_ch_T0000189;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000189;transcript_name=HG00642_ch_T0000189;gene_name=LINC03112;ID=exon:HG00642_ch_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2262409	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00642_ch_T0000189;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000189;transcript_name=HG00642_ch_T0000189;gene_name=LINC03112;ID=intron:HG00642_ch_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2262410	2262547	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00642_ch_T0000189;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000189;transcript_name=HG00642_ch_T0000189;gene_name=LINC03112;ID=exon:HG00642_ch_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287761	1000	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=HG00642_ch_T0000190;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=exon:HG00642_ch_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=intron:HG00642_ch_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=exon:HG00642_ch_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2252288	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=intron:HG00642_ch_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252289	2252465	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=exon:HG00642_ch_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=intron:HG00642_ch_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287761	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00642_ch_T0000190;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000190;transcript_name=HG00642_ch_T0000190;gene_name=LINC03112;ID=exon:HG00642_ch_T0000190:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287755	1000	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=HG00642_ch_T0000191;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=exon:HG00642_ch_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=intron:HG00642_ch_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=exon:HG00642_ch_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2252271	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=intron:HG00642_ch_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252272	2252465	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=exon:HG00642_ch_T0000191:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=intron:HG00642_ch_T0000191:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287755	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00642_ch_T0000191;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000191;transcript_name=HG00642_ch_T0000191;gene_name=LINC03112;ID=exon:HG00642_ch_T0000191:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244241	2287757	1000	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=HG00642_ch_T0000192;Name=LINC03112
HG00642_chrY	CAT	exon	2244241	2245506	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000192;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=exon:HG00642_ch_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000192;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=intron:HG00642_ch_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000192;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=exon:HG00642_ch_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2287677	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000192;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=intron:HG00642_ch_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287757	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00642_ch_T0000192;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000192;transcript_name=HG00642_ch_T0000192;gene_name=LINC03112;ID=exon:HG00642_ch_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244242	2287755	1000	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=HG00642_ch_T0000193;Name=LINC03112
HG00642_chrY	CAT	exon	2244242	2245506	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000193;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=exon:HG00642_ch_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2252288	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000193;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=intron:HG00642_ch_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252289	2252465	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000193;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=exon:HG00642_ch_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000193;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=intron:HG00642_ch_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287755	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00642_ch_T0000193;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000193;transcript_name=HG00642_ch_T0000193;gene_name=LINC03112;ID=exon:HG00642_ch_T0000193:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287764	1000	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=HG00642_ch_T0000194;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=exon:HG00642_ch_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=intron:HG00642_ch_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=exon:HG00642_ch_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2251333	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=intron:HG00642_ch_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2251334	2251666	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=exon:HG00642_ch_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2251667	2287677	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=intron:HG00642_ch_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287764	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00642_ch_T0000194;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000194;transcript_name=HG00642_ch_T0000194;gene_name=LINC03112;ID=exon:HG00642_ch_T0000194:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287764	1000	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=HG00642_ch_T0000195;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=exon:HG00642_ch_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=intron:HG00642_ch_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=exon:HG00642_ch_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2253097	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=intron:HG00642_ch_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2253098	2253207	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=exon:HG00642_ch_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2253208	2253355	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=intron:HG00642_ch_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2253356	2253445	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=exon:HG00642_ch_T0000195:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2253446	2287677	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=intron:HG00642_ch_T0000195:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287764	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00642_ch_T0000195;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000195;transcript_name=HG00642_ch_T0000195;gene_name=LINC03112;ID=exon:HG00642_ch_T0000195:4;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287756	1000	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=HG00642_ch_T0000196;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=exon:HG00642_ch_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=intron:HG00642_ch_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=exon:HG00642_ch_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2283567	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=intron:HG00642_ch_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283873	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=exon:HG00642_ch_T0000196:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283874	2287677	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=intron:HG00642_ch_T0000196:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287756	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00642_ch_T0000196;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000196;transcript_name=HG00642_ch_T0000196;gene_name=LINC03112;ID=exon:HG00642_ch_T0000196:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287743	1000	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=HG00642_ch_T0000197;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=exon:HG00642_ch_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=intron:HG00642_ch_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=exon:HG00642_ch_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2252271	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=intron:HG00642_ch_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252272	2252465	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=exon:HG00642_ch_T0000197:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2283567	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=intron:HG00642_ch_T0000197:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283849	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=exon:HG00642_ch_T0000197:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=intron:HG00642_ch_T0000197:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287743	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00642_ch_T0000197;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000197;transcript_name=HG00642_ch_T0000197;gene_name=LINC03112;ID=exon:HG00642_ch_T0000197:4;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287740	1000	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=HG00642_ch_T0000198;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000198;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=exon:HG00642_ch_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2283567	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000198;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=intron:HG00642_ch_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283873	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000198;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=exon:HG00642_ch_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283874	2287677	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000198;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=intron:HG00642_ch_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287740	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00642_ch_T0000198;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000198;transcript_name=HG00642_ch_T0000198;gene_name=LINC03112;ID=exon:HG00642_ch_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287739	1000	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=HG00642_ch_T0000199;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=exon:HG00642_ch_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=intron:HG00642_ch_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=exon:HG00642_ch_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2252373	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=intron:HG00642_ch_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252374	2252465	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=exon:HG00642_ch_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2287677	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=intron:HG00642_ch_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287739	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00642_ch_T0000199;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000199;transcript_name=HG00642_ch_T0000199;gene_name=LINC03112;ID=exon:HG00642_ch_T0000199:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287736	1000	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=HG00642_ch_T0000200;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=exon:HG00642_ch_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=intron:HG00642_ch_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=exon:HG00642_ch_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2260076	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=intron:HG00642_ch_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2260077	2260153	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=exon:HG00642_ch_T0000200:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2260154	2287677	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=intron:HG00642_ch_T0000200:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287736	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00642_ch_T0000200;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000200;transcript_name=HG00642_ch_T0000200;gene_name=LINC03112;ID=exon:HG00642_ch_T0000200:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287733	1000	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=HG00642_ch_T0000201;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2244362	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000201;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=exon:HG00642_ch_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2244363	2245298	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000201;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=intron:HG00642_ch_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2245299	2245506	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000201;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=exon:HG00642_ch_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2287597	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000201;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=intron:HG00642_ch_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287598	2287733	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00642_ch_T0000201;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000201;transcript_name=HG00642_ch_T0000201;gene_name=LINC03112;ID=exon:HG00642_ch_T0000201:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2287728	1000	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=HG00642_ch_T0000202;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=exon:HG00642_ch_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=intron:HG00642_ch_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=exon:HG00642_ch_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2252373	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=intron:HG00642_ch_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2252374	2252465	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=exon:HG00642_ch_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2252466	2283567	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=intron:HG00642_ch_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283849	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=exon:HG00642_ch_T0000202:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=intron:HG00642_ch_T0000202:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287728	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00642_ch_T0000202;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000202;transcript_name=HG00642_ch_T0000202;gene_name=LINC03112;ID=exon:HG00642_ch_T0000202:4;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2262438	1000	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=HG00642_ch_T0000203;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000203;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=exon:HG00642_ch_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000203;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=intron:HG00642_ch_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248379	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000203;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=exon:HG00642_ch_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248380	2262409	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000203;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=intron:HG00642_ch_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2262410	2262438	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00642_ch_T0000203;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000203;transcript_name=HG00642_ch_T0000203;gene_name=LINC03112;ID=exon:HG00642_ch_T0000203:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244243	2262170	1000	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00642_ch_T0000204;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000204;gene_name=LINC03112;ID=HG00642_ch_T0000204;Name=LINC03112
HG00642_chrY	CAT	exon	2244243	2245506	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00642_ch_T0000204;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000204;transcript_name=HG00642_ch_T0000204;gene_name=LINC03112;ID=exon:HG00642_ch_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2262017	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00642_ch_T0000204;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000204;transcript_name=HG00642_ch_T0000204;gene_name=LINC03112;ID=intron:HG00642_ch_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2262018	2262170	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00642_ch_T0000204;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000204;transcript_name=HG00642_ch_T0000204;gene_name=LINC03112;ID=exon:HG00642_ch_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244246	2287755	1000	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=HG00642_ch_T0000205;Name=LINC03112
HG00642_chrY	CAT	exon	2244246	2245506	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=exon:HG00642_ch_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2248223	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=intron:HG00642_ch_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2248224	2248311	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=exon:HG00642_ch_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2248312	2283567	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=intron:HG00642_ch_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2283568	2283849	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=exon:HG00642_ch_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=intron:HG00642_ch_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287755	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00642_ch_T0000205;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000205;transcript_name=HG00642_ch_T0000205;gene_name=LINC03112;ID=exon:HG00642_ch_T0000205:3;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2244246	2260270	1000	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00642_ch_T0000206;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000206;gene_name=LINC03112;ID=HG00642_ch_T0000206;Name=LINC03112
HG00642_chrY	CAT	exon	2244246	2245506	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00642_ch_T0000206;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000206;transcript_name=HG00642_ch_T0000206;gene_name=LINC03112;ID=exon:HG00642_ch_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2245507	2260076	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00642_ch_T0000206;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000206;transcript_name=HG00642_ch_T0000206;gene_name=LINC03112;ID=intron:HG00642_ch_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2260077	2260270	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00642_ch_T0000206;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000206;transcript_name=HG00642_ch_T0000206;gene_name=LINC03112;ID=exon:HG00642_ch_T0000206:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2283482	2287744	1000	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00642_ch_T0000211;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000211;gene_name=LINC03112;ID=HG00642_ch_T0000211;Name=LINC03112
HG00642_chrY	CAT	exon	2283482	2283849	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00642_ch_T0000211;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000211;transcript_name=HG00642_ch_T0000211;gene_name=LINC03112;ID=exon:HG00642_ch_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2283850	2287677	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00642_ch_T0000211;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000211;transcript_name=HG00642_ch_T0000211;gene_name=LINC03112;ID=intron:HG00642_ch_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2287678	2287744	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00642_ch_T0000211;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000211;transcript_name=HG00642_ch_T0000211;gene_name=LINC03112;ID=exon:HG00642_ch_T0000211:1;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287023	2287755	1000	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.864;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG00642_ch_T0000213;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_G0000044;transcript_name=HG00642_ch_T0000213;gene_name=LINC03112;ID=HG00642_ch_T0000213;Name=LINC03112
HG00642_chrY	CAT	exon	2287023	2287755	.	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.864;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG00642_ch_T0000213;gene_id=HG00642_ch_G0000044;Parent=HG00642_ch_T0000213;transcript_name=HG00642_ch_T0000213;gene_name=LINC03112;ID=exon:HG00642_ch_T0000213:0;Name=LINC03112;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2262230	2284599	.	+	.	source_gene_common_name=ENSG00000310557;source_gene=ENSG00000310557.1;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;gene_id=HG00642_ch_G0000045;gene_biotype=lncRNA;gene_name=ENSG00000310557;gene_sources=liftoff;ID=HG00642_ch_G0000045;Name=ENSG00000310557
HG00642_chrY	CAT	transcript	2262230	2284599	1000	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_G0000045;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=HG00642_ch_T0000207;Name=ENSG00000310557
HG00642_chrY	CAT	exon	2262230	2262421	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000207:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2262422	2271902	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000207:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271903	2271977	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000207:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271978	2275454	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000207:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2275455	2275617	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000207:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2275618	2284391	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000207:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2284392	2284599	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00642_ch_T0000207;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000207;transcript_name=HG00642_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000207:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2262231	2281824	1000	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_G0000045;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=HG00642_ch_T0000208;Name=ENSG00000310557
HG00642_chrY	CAT	exon	2262231	2262421	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000208:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2262422	2271902	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000208:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271903	2271977	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000208:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271978	2275454	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000208:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2275455	2275617	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000208:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2275618	2281485	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000208:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2281486	2281824	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00642_ch_T0000208;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000208;transcript_name=HG00642_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000208:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2262233	2284598	1000	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_G0000045;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=HG00642_ch_T0000209;Name=ENSG00000310557
HG00642_chrY	CAT	exon	2262233	2262421	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000209:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2262422	2271427	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000209:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271428	2271554	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000209:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271555	2271854	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000209:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271855	2271977	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000209:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271978	2275454	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000209:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2275455	2275617	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000209:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2275618	2284391	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000209:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2284392	2284598	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00642_ch_T0000209;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000209;transcript_name=HG00642_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000209:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2262319	2281806	1000	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_G0000045;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=HG00642_ch_T0000210;Name=ENSG00000310557
HG00642_chrY	CAT	exon	2262319	2262421	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000210:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2262422	2271427	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000210:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271428	2271554	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000210:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271555	2271902	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000210:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2271903	2271977	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000210:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2271978	2275454	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000210:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2275455	2275617	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000210:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2275618	2281485	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=intron:HG00642_ch_T0000210:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2281486	2281806	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00642_ch_T0000210;gene_id=HG00642_ch_G0000045;Parent=HG00642_ch_T0000210;transcript_name=HG00642_ch_T0000210;gene_name=ENSG00000310557;ID=exon:HG00642_ch_T0000210:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2286978	2345005	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292362.2;gene_id=HG00642_ch_G0000046;gene_biotype=lncRNA;gene_name=CD99P1;gene_sources=liftoff;ID=HG00642_ch_G0000046;Name=CD99P1
HG00642_chrY	CAT	transcript	2286978	2317156	1000	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=HG00642_ch_T0000212;Name=CD99P1
HG00642_chrY	CAT	exon	2286978	2287047	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2287048	2289545	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=intron:HG00642_ch_T0000212:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317156	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000212;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000212;transcript_name=HG00642_ch_T0000212;gene_name=CD99P1;ID=exon:HG00642_ch_T0000212:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287418	2317162	1000	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=HG00642_ch_T0000214;Name=CD99P1
HG00642_chrY	CAT	exon	2287418	2287540	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2287541	2289545	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=intron:HG00642_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317162	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000214;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000214;transcript_name=HG00642_ch_T0000214;gene_name=CD99P1;ID=exon:HG00642_ch_T0000214:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287446	2317164	1000	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=HG00642_ch_T0000215;Name=CD99P1
HG00642_chrY	CAT	exon	2287446	2287540	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2287541	2289545	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=intron:HG00642_ch_T0000215:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317164	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000215;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000215;transcript_name=HG00642_ch_T0000215;gene_name=CD99P1;ID=exon:HG00642_ch_T0000215:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287501	2301352	1000	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=HG00642_ch_T0000216;Name=CD99P1
HG00642_chrY	CAT	exon	2287501	2287540	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2287541	2289545	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=intron:HG00642_ch_T0000216:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301352	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000216;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000216;transcript_name=HG00642_ch_T0000216;gene_name=CD99P1;ID=exon:HG00642_ch_T0000216:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287903	2317164	1000	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=HG00642_ch_T0000218;Name=CD99P1
HG00642_chrY	CAT	exon	2287903	2288041	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2297280	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=intron:HG00642_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317164	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000218;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000218;transcript_name=HG00642_ch_T0000218;gene_name=CD99P1;ID=exon:HG00642_ch_T0000218:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287912	2317158	1000	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=HG00642_ch_T0000219;Name=CD99P1
HG00642_chrY	CAT	exon	2287912	2288041	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301998	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=intron:HG00642_ch_T0000219:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000219;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000219;transcript_name=HG00642_ch_T0000219;gene_name=CD99P1;ID=exon:HG00642_ch_T0000219:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287914	2317165	1000	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=HG00642_ch_T0000220;Name=CD99P1
HG00642_chrY	CAT	exon	2287914	2288041	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=intron:HG00642_ch_T0000220:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317165	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000220;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000220;transcript_name=HG00642_ch_T0000220;gene_name=CD99P1;ID=exon:HG00642_ch_T0000220:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287920	2317553	1000	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=HG00642_ch_T0000221;Name=CD99P1
HG00642_chrY	CAT	exon	2287920	2288041	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=intron:HG00642_ch_T0000221:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317553	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000221;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000221;transcript_name=HG00642_ch_T0000221;gene_name=CD99P1;ID=exon:HG00642_ch_T0000221:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287920	2317158	1000	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=HG00642_ch_T0000222;Name=CD99P1
HG00642_chrY	CAT	exon	2287920	2288041	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=exon:HG00642_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=intron:HG00642_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=exon:HG00642_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=intron:HG00642_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=exon:HG00642_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2316802	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=intron:HG00642_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000222;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000222;transcript_name=HG00642_ch_T0000222;gene_name=CD99P1;ID=exon:HG00642_ch_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287920	2296045	1000	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=HG00642_ch_T0000223;Name=CD99P1
HG00642_chrY	CAT	exon	2287920	2288041	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=exon:HG00642_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=intron:HG00642_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=exon:HG00642_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=intron:HG00642_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=exon:HG00642_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=intron:HG00642_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2296045	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000223;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000223;transcript_name=HG00642_ch_T0000223;gene_name=CD99P1;ID=exon:HG00642_ch_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287920	2317158	1000	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=HG00642_ch_T0000224;Name=CD99P1
HG00642_chrY	CAT	exon	2287920	2288041	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2316802	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=intron:HG00642_ch_T0000224:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000224;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000224;transcript_name=HG00642_ch_T0000224;gene_name=CD99P1;ID=exon:HG00642_ch_T0000224:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287920	2337873	1000	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=HG00642_ch_T0000225;Name=CD99P1
HG00642_chrY	CAT	exon	2287920	2288041	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337315	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=intron:HG00642_ch_T0000225:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337316	2337873	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000225;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000225;transcript_name=HG00642_ch_T0000225;gene_name=CD99P1;ID=exon:HG00642_ch_T0000225:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287929	2317164	1000	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=HG00642_ch_T0000226;Name=CD99P1
HG00642_chrY	CAT	exon	2287929	2288041	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2316802	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=intron:HG00642_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317164	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000226;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000226;transcript_name=HG00642_ch_T0000226;gene_name=CD99P1;ID=exon:HG00642_ch_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287936	2317553	1000	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=HG00642_ch_T0000227;Name=CD99P1
HG00642_chrY	CAT	exon	2287936	2288041	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2297280	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=intron:HG00642_ch_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317553	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000227;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000227;transcript_name=HG00642_ch_T0000227;gene_name=CD99P1;ID=exon:HG00642_ch_T0000227:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287936	2317164	1000	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=HG00642_ch_T0000228;Name=CD99P1
HG00642_chrY	CAT	exon	2287936	2288041	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2316802	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=intron:HG00642_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317164	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000228;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000228;transcript_name=HG00642_ch_T0000228;gene_name=CD99P1;ID=exon:HG00642_ch_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287936	2345004	1000	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=HG00642_ch_T0000229;Name=CD99P1
HG00642_chrY	CAT	exon	2287936	2288041	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2344484	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=intron:HG00642_ch_T0000229:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2344485	2345004	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000229;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000229;transcript_name=HG00642_ch_T0000229;gene_name=CD99P1;ID=exon:HG00642_ch_T0000229:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287946	2317550	1000	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=HG00642_ch_T0000230;Name=CD99P1
HG00642_chrY	CAT	exon	2287946	2288041	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297934	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297935	2298038	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=intron:HG00642_ch_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317550	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000230;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000230;transcript_name=HG00642_ch_T0000230;gene_name=CD99P1;ID=exon:HG00642_ch_T0000230:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287946	2317158	1000	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=HG00642_ch_T0000231;Name=CD99P1
HG00642_chrY	CAT	exon	2287946	2288041	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297298	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297299	2297325	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=intron:HG00642_ch_T0000231:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000231;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000231;transcript_name=HG00642_ch_T0000231;gene_name=CD99P1;ID=exon:HG00642_ch_T0000231:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287948	2317162	1000	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000232;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000232;gene_name=CD99P1;ID=HG00642_ch_T0000232;Name=CD99P1
HG00642_chrY	CAT	exon	2287948	2288041	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000232;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000232;transcript_name=HG00642_ch_T0000232;gene_name=CD99P1;ID=exon:HG00642_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2316802	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000232;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000232;transcript_name=HG00642_ch_T0000232;gene_name=CD99P1;ID=intron:HG00642_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317162	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000232;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000232;transcript_name=HG00642_ch_T0000232;gene_name=CD99P1;ID=exon:HG00642_ch_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2297594	1000	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=HG00642_ch_T0000233;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000233;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=exon:HG00642_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2294356	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000233;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=intron:HG00642_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000233;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=exon:HG00642_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000233;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=intron:HG00642_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297594	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000233;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000233;transcript_name=HG00642_ch_T0000233;gene_name=CD99P1;ID=exon:HG00642_ch_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2326979	1000	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=HG00642_ch_T0000234;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2326333	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=intron:HG00642_ch_T0000234:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2326334	2326979	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000234;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000234;transcript_name=HG00642_ch_T0000234;gene_name=CD99P1;ID=exon:HG00642_ch_T0000234:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2345005	1000	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=HG00642_ch_T0000235;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2344484	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=intron:HG00642_ch_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2344485	2345005	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000235;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000235;transcript_name=HG00642_ch_T0000235;gene_name=CD99P1;ID=exon:HG00642_ch_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2305859	1000	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=HG00642_ch_T0000236;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=intron:HG00642_ch_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305859	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000236;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000236;transcript_name=HG00642_ch_T0000236;gene_name=CD99P1;ID=exon:HG00642_ch_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2337756	1000	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=HG00642_ch_T0000237;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2297280	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337315	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=intron:HG00642_ch_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337316	2337756	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000237;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000237;transcript_name=HG00642_ch_T0000237;gene_name=CD99P1;ID=exon:HG00642_ch_T0000237:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2337757	1000	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=HG00642_ch_T0000238;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337315	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=intron:HG00642_ch_T0000238:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337316	2337757	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000238;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000238;transcript_name=HG00642_ch_T0000238;gene_name=CD99P1;ID=exon:HG00642_ch_T0000238:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2337725	1000	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=HG00642_ch_T0000239;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337275	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=intron:HG00642_ch_T0000239:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337276	2337725	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000239;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000239;transcript_name=HG00642_ch_T0000239;gene_name=CD99P1;ID=exon:HG00642_ch_T0000239:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2337725	1000	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=HG00642_ch_T0000240;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337256	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=intron:HG00642_ch_T0000240:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337257	2337725	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000240;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000240;transcript_name=HG00642_ch_T0000240;gene_name=CD99P1;ID=exon:HG00642_ch_T0000240:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287953	2337724	1000	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=HG00642_ch_T0000241;Name=CD99P1
HG00642_chrY	CAT	exon	2287953	2288041	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337256	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=intron:HG00642_ch_T0000241:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337257	2337724	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000241;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000241;transcript_name=HG00642_ch_T0000241;gene_name=CD99P1;ID=exon:HG00642_ch_T0000241:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287958	2336844	1000	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=HG00642_ch_T0000242;Name=CD99P1
HG00642_chrY	CAT	exon	2287958	2288041	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2336693	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=intron:HG00642_ch_T0000242:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2336694	2336844	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000242;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000242;transcript_name=HG00642_ch_T0000242;gene_name=CD99P1;ID=exon:HG00642_ch_T0000242:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287961	2317158	1000	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=HG00642_ch_T0000243;Name=CD99P1
HG00642_chrY	CAT	exon	2287961	2288041	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2297280	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=intron:HG00642_ch_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000243;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000243;transcript_name=HG00642_ch_T0000243;gene_name=CD99P1;ID=exon:HG00642_ch_T0000243:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287961	2317160	1000	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=HG00642_ch_T0000244;Name=CD99P1
HG00642_chrY	CAT	exon	2287961	2288041	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301893	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301894	2301998	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=intron:HG00642_ch_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317160	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000244;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000244;transcript_name=HG00642_ch_T0000244;gene_name=CD99P1;ID=exon:HG00642_ch_T0000244:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287963	2317158	1000	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=HG00642_ch_T0000245;Name=CD99P1
HG00642_chrY	CAT	exon	2287963	2288041	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=exon:HG00642_ch_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=intron:HG00642_ch_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=exon:HG00642_ch_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=intron:HG00642_ch_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=exon:HG00642_ch_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2305145	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=intron:HG00642_ch_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=exon:HG00642_ch_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=intron:HG00642_ch_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000245;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000245;transcript_name=HG00642_ch_T0000245;gene_name=CD99P1;ID=exon:HG00642_ch_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287963	2317158	1000	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=HG00642_ch_T0000246;Name=CD99P1
HG00642_chrY	CAT	exon	2287963	2288041	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2297280	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301893	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301894	2301998	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=intron:HG00642_ch_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000246;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000246;transcript_name=HG00642_ch_T0000246;gene_name=CD99P1;ID=exon:HG00642_ch_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287963	2317158	1000	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=HG00642_ch_T0000247;Name=CD99P1
HG00642_chrY	CAT	exon	2287963	2288041	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=exon:HG00642_ch_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=intron:HG00642_ch_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=exon:HG00642_ch_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=intron:HG00642_ch_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=exon:HG00642_ch_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=intron:HG00642_ch_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=exon:HG00642_ch_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2316802	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=intron:HG00642_ch_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000247;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000247;transcript_name=HG00642_ch_T0000247;gene_name=CD99P1;ID=exon:HG00642_ch_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287964	2336042	1000	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=HG00642_ch_T0000248;Name=CD99P1
HG00642_chrY	CAT	exon	2287964	2288041	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2333839	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=intron:HG00642_ch_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2333840	2336042	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000248;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000248;transcript_name=HG00642_ch_T0000248;gene_name=CD99P1;ID=exon:HG00642_ch_T0000248:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287965	2317158	1000	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=HG00642_ch_T0000249;Name=CD99P1
HG00642_chrY	CAT	exon	2287965	2288041	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297073	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297074	2297157	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297158	2297280	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=intron:HG00642_ch_T0000249:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000249;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000249;transcript_name=HG00642_ch_T0000249;gene_name=CD99P1;ID=exon:HG00642_ch_T0000249:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287966	2305832	1000	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=HG00642_ch_T0000250;Name=CD99P1
HG00642_chrY	CAT	exon	2287966	2288041	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2296017	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2296018	2296127	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2296128	2297280	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2305652	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=intron:HG00642_ch_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305653	2305832	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000250;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000250;transcript_name=HG00642_ch_T0000250;gene_name=CD99P1;ID=exon:HG00642_ch_T0000250:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287966	2317156	1000	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=HG00642_ch_T0000251;Name=CD99P1
HG00642_chrY	CAT	exon	2287966	2288041	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297073	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297074	2297157	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297158	2297280	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=intron:HG00642_ch_T0000251:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317156	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000251;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000251;transcript_name=HG00642_ch_T0000251;gene_name=CD99P1;ID=exon:HG00642_ch_T0000251:10;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287966	2317158	1000	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=HG00642_ch_T0000252;Name=CD99P1
HG00642_chrY	CAT	exon	2287966	2288041	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=intron:HG00642_ch_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=intron:HG00642_ch_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2301929	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=intron:HG00642_ch_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=intron:HG00642_ch_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=intron:HG00642_ch_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000252;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000252;transcript_name=HG00642_ch_T0000252;gene_name=CD99P1;ID=exon:HG00642_ch_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287981	2290936	1000	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=HG00642_ch_T0000254;Name=CD99P1
HG00642_chrY	CAT	exon	2287981	2288041	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000254;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=exon:HG00642_ch_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000254;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=intron:HG00642_ch_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000254;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=exon:HG00642_ch_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000254;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=intron:HG00642_ch_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290936	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000254;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000254;transcript_name=HG00642_ch_T0000254;gene_name=CD99P1;ID=exon:HG00642_ch_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287981	2317158	1000	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=HG00642_ch_T0000255;Name=CD99P1
HG00642_chrY	CAT	exon	2287981	2288041	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2297073	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297074	2297157	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297158	2297280	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=intron:HG00642_ch_T0000255:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000255;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000255;transcript_name=HG00642_ch_T0000255;gene_name=CD99P1;ID=exon:HG00642_ch_T0000255:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287981	2307376	1000	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=HG00642_ch_T0000256;Name=CD99P1
HG00642_chrY	CAT	exon	2287981	2288041	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2306937	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=intron:HG00642_ch_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2306938	2307376	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000256;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000256;transcript_name=HG00642_ch_T0000256;gene_name=CD99P1;ID=exon:HG00642_ch_T0000256:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287981	2317158	1000	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=HG00642_ch_T0000257;Name=CD99P1
HG00642_chrY	CAT	exon	2287981	2288041	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294540	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294541	2297280	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=intron:HG00642_ch_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000257;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000257;transcript_name=HG00642_ch_T0000257;gene_name=CD99P1;ID=exon:HG00642_ch_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2287981	2317158	1000	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=HG00642_ch_T0000258;Name=CD99P1
HG00642_chrY	CAT	exon	2287981	2288041	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290655	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290656	2290760	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=intron:HG00642_ch_T0000258:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000258;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000258;transcript_name=HG00642_ch_T0000258;gene_name=CD99P1;ID=exon:HG00642_ch_T0000258:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2288185	2301953	1000	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=HG00642_ch_T0000259;Name=CD99P1
HG00642_chrY	CAT	exon	2288185	2288250	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288251	2289545	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=intron:HG00642_ch_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301953	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000259;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000259;transcript_name=HG00642_ch_T0000259;gene_name=CD99P1;ID=exon:HG00642_ch_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2288541	2317158	1000	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=HG00642_ch_T0000260;Name=CD99P1
HG00642_chrY	CAT	exon	2288541	2288775	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288776	2289545	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=intron:HG00642_ch_T0000260:8;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000260;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000260;transcript_name=HG00642_ch_T0000260;gene_name=CD99P1;ID=exon:HG00642_ch_T0000260:9;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2288580	2317151	1000	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=HG00642_ch_T0000261;Name=CD99P1
HG00642_chrY	CAT	exon	2288580	2288775	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288776	2289545	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2297280	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301893	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301894	2301998	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=intron:HG00642_ch_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317151	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000261;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000261;transcript_name=HG00642_ch_T0000261;gene_name=CD99P1;ID=exon:HG00642_ch_T0000261:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2288900	2317162	1000	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=HG00642_ch_T0000262;Name=CD99P1
HG00642_chrY	CAT	exon	2288900	2289588	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=intron:HG00642_ch_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317162	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000262;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000262;transcript_name=HG00642_ch_T0000262;gene_name=CD99P1;ID=exon:HG00642_ch_T0000262:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2293604	2317165	1000	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=HG00642_ch_T0000264;Name=CD99P1
HG00642_chrY	CAT	exon	2293604	2293668	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2293669	2294356	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=intron:HG00642_ch_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317165	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000264;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000264;transcript_name=HG00642_ch_T0000264;gene_name=CD99P1;ID=exon:HG00642_ch_T0000264:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2293609	2317158	1000	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=HG00642_ch_T0000265;Name=CD99P1
HG00642_chrY	CAT	exon	2293609	2293668	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2293669	2294356	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=intron:HG00642_ch_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000265;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000265;transcript_name=HG00642_ch_T0000265;gene_name=CD99P1;ID=exon:HG00642_ch_T0000265:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2293628	2317164	1000	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=HG00642_ch_T0000266;Name=CD99P1
HG00642_chrY	CAT	exon	2293628	2293668	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2293669	2294356	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294540	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294541	2297280	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=intron:HG00642_ch_T0000266:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317164	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000266;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000266;transcript_name=HG00642_ch_T0000266;gene_name=CD99P1;ID=exon:HG00642_ch_T0000266:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2295160	2317523	1000	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=HG00642_ch_T0000267;Name=CD99P1
HG00642_chrY	CAT	exon	2295160	2297325	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=exon:HG00642_ch_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=intron:HG00642_ch_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=exon:HG00642_ch_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=intron:HG00642_ch_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=exon:HG00642_ch_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=intron:HG00642_ch_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=exon:HG00642_ch_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=intron:HG00642_ch_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317523	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000267;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000267;transcript_name=HG00642_ch_T0000267;gene_name=CD99P1;ID=exon:HG00642_ch_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2297241	2317158	1000	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=HG00642_ch_T0000268;Name=CD99P1
HG00642_chrY	CAT	exon	2297241	2297325	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=intron:HG00642_ch_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=intron:HG00642_ch_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=intron:HG00642_ch_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=intron:HG00642_ch_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=intron:HG00642_ch_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000268;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000268;transcript_name=HG00642_ch_T0000268;gene_name=CD99P1;ID=exon:HG00642_ch_T0000268:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2297266	2337746	1000	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=HG00642_ch_T0000269;Name=CD99P1
HG00642_chrY	CAT	exon	2297266	2297325	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=exon:HG00642_ch_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=intron:HG00642_ch_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=exon:HG00642_ch_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301929	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=intron:HG00642_ch_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=exon:HG00642_ch_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301999	2305145	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=intron:HG00642_ch_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=exon:HG00642_ch_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2337315	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=intron:HG00642_ch_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2337316	2337746	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000269;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000269;transcript_name=HG00642_ch_T0000269;gene_name=CD99P1;ID=exon:HG00642_ch_T0000269:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2297304	2317158	1000	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_G0000046;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=HG00642_ch_T0000270;Name=CD99P1
HG00642_chrY	CAT	exon	2297304	2297325	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=exon:HG00642_ch_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=intron:HG00642_ch_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=exon:HG00642_ch_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2305145	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=intron:HG00642_ch_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2305146	2305191	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=exon:HG00642_ch_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2305192	2316802	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=intron:HG00642_ch_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2316803	2317158	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000270;gene_id=HG00642_ch_G0000046;Parent=HG00642_ch_T0000270;transcript_name=HG00642_ch_T0000270;gene_name=CD99P1;ID=exon:HG00642_ch_T0000270:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2287763	2287826	.	+	.	source_gene_common_name=MIR6089;source_gene=ENSG00000292346.1;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;gene_id=HG00642_ch_G0000047;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG00642_ch_G0000047;Name=MIR6089
HG00642_chrY	CAT	transcript	2287763	2287826	1000	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG00642_ch_T0000217;gene_id=HG00642_ch_G0000047;Parent=HG00642_ch_G0000047;transcript_name=HG00642_ch_T0000217;gene_name=MIR6089;ID=HG00642_ch_T0000217;Name=MIR6089
HG00642_chrY	CAT	exon	2287763	2287826	.	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG00642_ch_T0000217;gene_id=HG00642_ch_G0000047;Parent=HG00642_ch_T0000217;transcript_name=HG00642_ch_T0000217;gene_name=MIR6089;ID=exon:HG00642_ch_T0000217:0;Name=MIR6089;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2287976	2301998	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292361.1;gene_id=HG00642_ch_G0000048;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG00642_ch_G0000048;Name=CD99P1
HG00642_chrY	CAT	transcript	2287976	2301998	1000	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_G0000048;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=HG00642_ch_T0000253;Name=CD99P1
HG00642_chrY	CAT	exon	2287976	2288041	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2288042	2289545	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2289546	2289588	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2289589	2290691	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2290692	2290760	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2290761	2294356	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2294357	2294510	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2294511	2297280	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297281	2297325	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2297326	2297969	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2297970	2298038	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2298039	2301234	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301235	2301279	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2301280	2301929	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=intron:HG00642_ch_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2301930	2301998	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00642_ch_T0000253;gene_id=HG00642_ch_G0000048;Parent=HG00642_ch_T0000253;transcript_name=HG00642_ch_T0000253;gene_name=CD99P1;ID=exon:HG00642_ch_T0000253:7;Name=CD99P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2291530	2293888	.	-	.	source_gene_common_name=LINC00102;source_gene=ENSG00000292347.1;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;gene_id=HG00642_ch_G0000049;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG00642_ch_G0000049;Name=LINC00102
HG00642_chrY	CAT	transcript	2291530	2293888	1000	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00642_ch_T0000263;gene_id=HG00642_ch_G0000049;Parent=HG00642_ch_G0000049;transcript_name=HG00642_ch_T0000263;gene_name=LINC00102;ID=HG00642_ch_T0000263;Name=LINC00102
HG00642_chrY	CAT	exon	2291530	2292238	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00642_ch_T0000263;gene_id=HG00642_ch_G0000049;Parent=HG00642_ch_T0000263;transcript_name=HG00642_ch_T0000263;gene_name=LINC00102;ID=exon:HG00642_ch_T0000263:0;Name=LINC00102;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2292239	2293257	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00642_ch_T0000263;gene_id=HG00642_ch_G0000049;Parent=HG00642_ch_T0000263;transcript_name=HG00642_ch_T0000263;gene_name=LINC00102;ID=intron:HG00642_ch_T0000263:0;Name=LINC00102;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2293258	2293888	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00642_ch_T0000263;gene_id=HG00642_ch_G0000049;Parent=HG00642_ch_T0000263;transcript_name=HG00642_ch_T0000263;gene_name=LINC00102;ID=exon:HG00642_ch_T0000263:1;Name=LINC00102;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2369574	2419732	.	+	.	source_gene_common_name=CD99;source_gene=ENSG00000292348.1;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;gene_id=HG00642_ch_G0000050;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff;ID=HG00642_ch_G0000050;Name=CD99
HG00642_chrY	CAT	transcript	2369574	2419723	100	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=HG00642_ch_T0000271;Name=CD99
HG00642_chrY	CAT	exon	2369574	2369814	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=start_codon:HG00642_ch_T0000271;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2411778	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2411779	2411796	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2411779	2411786	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=CDS:HG00642_ch_T0000271:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2411784	2411786	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000271;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2411797	2416625	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416626	2416679	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=intron:HG00642_ch_T0000271:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419723	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00642_ch_T0000271;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000271;transcript_name=HG00642_ch_T0000271;gene_name=CD99;ID=exon:HG00642_ch_T0000271:10;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369663	2419523	100	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=HG00642_ch_T0000272;Name=CD99
HG00642_chrY	CAT	exon	2369663	2369814	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=start_codon:HG00642_ch_T0000272;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2398083	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2416622	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416623	2416679	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2416623	2416679	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=intron:HG00642_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419523	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=exon:HG00642_ch_T0000272:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2419201	2419226	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=CDS:HG00642_ch_T0000272:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2419224	2419226	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00642_ch_T0000272;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000272;transcript_name=HG00642_ch_T0000272;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000272;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369667	2412089	100	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=HG00642_ch_T0000273;Name=CD99
HG00642_chrY	CAT	exon	2369667	2369814	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=start_codon:HG00642_ch_T0000273;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2405716	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2405717	2405767	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2405717	2405767	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2405768	2411778	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=intron:HG00642_ch_T0000273:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2411779	2412089	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=exon:HG00642_ch_T0000273:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2411779	2411786	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=CDS:HG00642_ch_T0000273:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2411784	2411786	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00642_ch_T0000273;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000273;transcript_name=HG00642_ch_T0000273;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000273;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369679	2396440	1000	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=HG00642_ch_T0000274;Name=CD99
HG00642_chrY	CAT	exon	2369679	2369814	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000274;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=exon:HG00642_ch_T0000274:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000274;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=intron:HG00642_ch_T0000274:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000274;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=exon:HG00642_ch_T0000274:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000274;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=intron:HG00642_ch_T0000274:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396440	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00642_ch_T0000274;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000274;transcript_name=HG00642_ch_T0000274;gene_name=CD99;ID=exon:HG00642_ch_T0000274:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369682	2419732	100	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=HG00642_ch_T0000275;Name=CD99
HG00642_chrY	CAT	exon	2369682	2369814	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=start_codon:HG00642_ch_T0000275;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2416622	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416623	2416679	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2416623	2416679	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=intron:HG00642_ch_T0000275:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419732	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=exon:HG00642_ch_T0000275:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2419201	2419226	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=CDS:HG00642_ch_T0000275:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2419224	2419226	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00642_ch_T0000275;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000275;transcript_name=HG00642_ch_T0000275;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000275;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369682	2401858	1000	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=HG00642_ch_T0000276;Name=CD99
HG00642_chrY	CAT	exon	2369682	2369814	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=intron:HG00642_ch_T0000276:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401858	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00642_ch_T0000276;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000276;transcript_name=HG00642_ch_T0000276;gene_name=CD99;ID=exon:HG00642_ch_T0000276:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369697	2412094	100	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=HG00642_ch_T0000277;Name=CD99
HG00642_chrY	CAT	exon	2369697	2369814	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=start_codon:HG00642_ch_T0000277;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2411778	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=intron:HG00642_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2411779	2412094	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=exon:HG00642_ch_T0000277:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2411779	2411786	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=CDS:HG00642_ch_T0000277:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2411784	2411786	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00642_ch_T0000277;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000277;transcript_name=HG00642_ch_T0000277;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000277;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369700	2419713	100	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=HG00642_ch_T0000278;Name=CD99
HG00642_chrY	CAT	exon	2369700	2369814	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=start_codon:HG00642_ch_T0000278;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2416625	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416626	2416679	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2416626	2416679	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=intron:HG00642_ch_T0000278:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419713	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=exon:HG00642_ch_T0000278:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2419201	2419226	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=CDS:HG00642_ch_T0000278:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2419224	2419226	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00642_ch_T0000278;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000278;transcript_name=HG00642_ch_T0000278;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000278;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369713	2394021	1000	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00642_ch_T0000279;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000279;gene_name=CD99;ID=HG00642_ch_T0000279;Name=CD99
HG00642_chrY	CAT	exon	2369713	2369814	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00642_ch_T0000279;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000279;transcript_name=HG00642_ch_T0000279;gene_name=CD99;ID=exon:HG00642_ch_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00642_ch_T0000279;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000279;transcript_name=HG00642_ch_T0000279;gene_name=CD99;ID=intron:HG00642_ch_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2394021	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00642_ch_T0000279;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000279;transcript_name=HG00642_ch_T0000279;gene_name=CD99;ID=exon:HG00642_ch_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369748	2370640	100	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=HG00642_ch_T0000280;Name=CD99
HG00642_chrY	CAT	exon	2369748	2369814	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=exon:HG00642_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=CDS:HG00642_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=start_codon:HG00642_ch_T0000280;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2370174	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=intron:HG00642_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2370175	2370640	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=exon:HG00642_ch_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2370175	2370338	.	+	2	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=CDS:HG00642_ch_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2370336	2370338	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00642_ch_T0000280;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000280;transcript_name=HG00642_ch_T0000280;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000280;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369748	2419226	1000	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=HG00642_ch_T0000281;Name=CD99
HG00642_chrY	CAT	exon	2369748	2369814	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2369748	2369814	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2369748	2369750	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=start_codon:HG00642_ch_T0000281;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2369815	2392844	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2392845	2392877	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2396030	2396077	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398084	2398128	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2398779	2398847	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401051	2401098	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2401738	2401788	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404684	2404797	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2411778	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2411779	2411796	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2411779	2411786	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=CDS:HG00642_ch_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2411784	2411786	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000281;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2411797	2416625	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416626	2416679	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=intron:HG00642_ch_T0000281:9;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419226	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00642_ch_T0000281;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000281;transcript_name=HG00642_ch_T0000281;gene_name=CD99;ID=exon:HG00642_ch_T0000281:10;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2369887	2404797	1000	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=HG00642_ch_T0000282;Name=CD99
HG00642_chrY	CAT	exon	2369887	2370082	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2370083	2392844	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2392845	2392877	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2392878	2396029	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=intron:HG00642_ch_T0000282:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404797	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00642_ch_T0000282;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000282;transcript_name=HG00642_ch_T0000282;gene_name=CD99;ID=exon:HG00642_ch_T0000282:7;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2395799	2404787	1000	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=HG00642_ch_T0000283;Name=CD99
HG00642_chrY	CAT	exon	2395799	2395899	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2395900	2396029	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2396030	2396077	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2396078	2398083	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398084	2398128	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=intron:HG00642_ch_T0000283:5;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404787	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00642_ch_T0000283;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000283;transcript_name=HG00642_ch_T0000283;gene_name=CD99;ID=exon:HG00642_ch_T0000283:6;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2397490	2404692	1000	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=HG00642_ch_T0000284;Name=CD99
HG00642_chrY	CAT	exon	2397490	2398128	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=exon:HG00642_ch_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398129	2398778	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=intron:HG00642_ch_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2398779	2398847	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=exon:HG00642_ch_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2398848	2401050	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=intron:HG00642_ch_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401051	2401098	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=exon:HG00642_ch_T0000284:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401099	2401737	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=intron:HG00642_ch_T0000284:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2401738	2401788	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=exon:HG00642_ch_T0000284:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2401789	2404683	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=intron:HG00642_ch_T0000284:3;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2404684	2404692	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00642_ch_T0000284;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000284;transcript_name=HG00642_ch_T0000284;gene_name=CD99;ID=exon:HG00642_ch_T0000284:4;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2404765	2419548	1000	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_G0000050;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=HG00642_ch_T0000285;Name=CD99
HG00642_chrY	CAT	exon	2404765	2404797	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=exon:HG00642_ch_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2404765	2404797	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=CDS:HG00642_ch_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2404798	2416303	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=intron:HG00642_ch_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2416304	2416679	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=exon:HG00642_ch_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2416304	2416338	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=CDS:HG00642_ch_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2416336	2416338	.	+	0	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=stop_codon:HG00642_ch_T0000285;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2416680	2419200	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=intron:HG00642_ch_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2419201	2419548	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00642_ch_T0000285;gene_id=HG00642_ch_G0000050;Parent=HG00642_ch_T0000285;transcript_name=HG00642_ch_T0000285;gene_name=CD99;ID=exon:HG00642_ch_T0000285:2;Name=CD99;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2430539	2532959	.	+	.	source_gene_common_name=XGY2;source_gene=ENSG00000290840.2;gene_id=HG00642_ch_G0000051;gene_biotype=lncRNA;gene_name=XGY2;gene_sources=liftoff;ID=HG00642_ch_G0000051;Name=XGY2
HG00642_chrY	CAT	transcript	2430539	2469238	1000	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=HG00642_ch_T0000286;Name=XGY2
HG00642_chrY	CAT	exon	2430539	2430791	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=exon:HG00642_ch_T0000286:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=intron:HG00642_ch_T0000286:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=exon:HG00642_ch_T0000286:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=intron:HG00642_ch_T0000286:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=exon:HG00642_ch_T0000286:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2468065	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=intron:HG00642_ch_T0000286:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2468066	2469238	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000286;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000286;transcript_name=HG00642_ch_T0000286;gene_name=XGY2;ID=exon:HG00642_ch_T0000286:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2465887	1000	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=HG00642_ch_T0000287;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=exon:HG00642_ch_T0000287:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=intron:HG00642_ch_T0000287:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=exon:HG00642_ch_T0000287:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=intron:HG00642_ch_T0000287:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=exon:HG00642_ch_T0000287:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2465311	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=intron:HG00642_ch_T0000287:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2465312	2465887	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000287;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000287;transcript_name=HG00642_ch_T0000287;gene_name=XGY2;ID=exon:HG00642_ch_T0000287:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2524007	1000	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=HG00642_ch_T0000288;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2519803	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2519804	2519945	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2519946	2520482	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2520483	2520560	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2520561	2522394	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2522395	2522575	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:5;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2522576	2523963	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=intron:HG00642_ch_T0000288:5;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2523964	2524007	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000288;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000288;transcript_name=HG00642_ch_T0000288;gene_name=XGY2;ID=exon:HG00642_ch_T0000288:6;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2524007	1000	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=HG00642_ch_T0000289;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2519345	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2519346	2519401	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2519402	2519803	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2519804	2519945	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2519946	2520482	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2520483	2520560	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:5;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2520561	2522394	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:5;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2522395	2522575	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:6;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2522576	2523963	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=intron:HG00642_ch_T0000289:6;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2523964	2524007	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000289;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000289;transcript_name=HG00642_ch_T0000289;gene_name=XGY2;ID=exon:HG00642_ch_T0000289:7;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2532959	1000	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=HG00642_ch_T0000290;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=exon:HG00642_ch_T0000290:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=intron:HG00642_ch_T0000290:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=exon:HG00642_ch_T0000290:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=intron:HG00642_ch_T0000290:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=exon:HG00642_ch_T0000290:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2523963	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=intron:HG00642_ch_T0000290:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2523964	2524061	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=exon:HG00642_ch_T0000290:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2524062	2532917	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=intron:HG00642_ch_T0000290:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2532918	2532959	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000290;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000290;transcript_name=HG00642_ch_T0000290;gene_name=XGY2;ID=exon:HG00642_ch_T0000290:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2453320	1000	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=HG00642_ch_T0000291;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000291;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=exon:HG00642_ch_T0000291:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000291;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=intron:HG00642_ch_T0000291:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000291;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=exon:HG00642_ch_T0000291:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000291;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=intron:HG00642_ch_T0000291:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453320	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000291;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000291;transcript_name=HG00642_ch_T0000291;gene_name=XGY2;ID=exon:HG00642_ch_T0000291:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2430752	2465951	1000	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=HG00642_ch_T0000292;Name=XGY2
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=exon:HG00642_ch_T0000292:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=intron:HG00642_ch_T0000292:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=exon:HG00642_ch_T0000292:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=intron:HG00642_ch_T0000292:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=exon:HG00642_ch_T0000292:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2453064	2465311	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=intron:HG00642_ch_T0000292:2;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2465312	2465370	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=exon:HG00642_ch_T0000292:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2465371	2465796	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=intron:HG00642_ch_T0000292:3;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2465797	2465951	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000292;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000292;transcript_name=HG00642_ch_T0000292;gene_name=XGY2;ID=exon:HG00642_ch_T0000292:4;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2465312	2469079	1000	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000296;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_G0000051;transcript_name=HG00642_ch_T0000296;gene_name=XGY2;ID=HG00642_ch_T0000296;Name=XGY2
HG00642_chrY	CAT	exon	2465312	2465370	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000296;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000296;transcript_name=HG00642_ch_T0000296;gene_name=XGY2;ID=exon:HG00642_ch_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2465371	2468065	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000296;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000296;transcript_name=HG00642_ch_T0000296;gene_name=XGY2;ID=intron:HG00642_ch_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2468066	2469079	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00642_ch_T0000296;gene_id=HG00642_ch_G0000051;Parent=HG00642_ch_T0000296;transcript_name=HG00642_ch_T0000296;gene_name=XGY2;ID=exon:HG00642_ch_T0000296:1;Name=XGY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2430752	2453063	.	+	.	source_gene_common_name=ENSG00000288686;source_gene=ENSG00000288686.1;gene_id=HG00642_ch_G0000052;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000288686;gene_sources=liftoff;ID=HG00642_ch_G0000052;Name=ENSG00000288686
HG00642_chrY	CAT	transcript	2430752	2453063	1000	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_G0000052;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=HG00642_ch_T0000293;Name=ENSG00000288686
HG00642_chrY	CAT	exon	2430752	2430791	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_T0000293;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=exon:HG00642_ch_T0000293:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2430792	2449001	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_T0000293;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=intron:HG00642_ch_T0000293:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2449002	2449043	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_T0000293;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=exon:HG00642_ch_T0000293:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2449044	2453039	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_T0000293;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=intron:HG00642_ch_T0000293:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2453040	2453063	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00642_ch_T0000293;gene_id=HG00642_ch_G0000052;Parent=HG00642_ch_T0000293;transcript_name=HG00642_ch_T0000293;gene_name=ENSG00000288686;ID=exon:HG00642_ch_T0000293:2;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2463066	2463170	.	+	.	source_gene_common_name=RNU6-1334P;source_gene=ENSG00000251841.1;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;gene_id=HG00642_ch_G0000053;gene_biotype=snRNA;gene_name=RNU6-1334P;gene_sources=liftoff;ID=HG00642_ch_G0000053;Name=RNU6-1334P
HG00642_chrY	CAT	transcript	2463066	2463170	1000	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG00642_ch_T0000294;gene_id=HG00642_ch_G0000053;Parent=HG00642_ch_G0000053;transcript_name=HG00642_ch_T0000294;gene_name=RNU6-1334P;ID=HG00642_ch_T0000294;Name=RNU6-1334P
HG00642_chrY	CAT	exon	2463066	2463170	.	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG00642_ch_T0000294;gene_id=HG00642_ch_G0000053;Parent=HG00642_ch_T0000294;transcript_name=HG00642_ch_T0000294;gene_name=RNU6-1334P;ID=exon:HG00642_ch_T0000294:0;Name=RNU6-1334P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2465172	2465999	.	-	.	source_gene_common_name=SRY;source_gene=ENSG00000184895.8;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;gene_id=HG00642_ch_G0000054;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff;ID=HG00642_ch_G0000054;Name=SRY
HG00642_chrY	CAT	transcript	2465172	2465999	100	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00642_ch_T0000295;gene_id=HG00642_ch_G0000054;Parent=HG00642_ch_G0000054;transcript_name=HG00642_ch_T0000295;gene_name=SRY;ID=HG00642_ch_T0000295;Name=SRY
HG00642_chrY	CAT	exon	2465172	2465999	.	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00642_ch_T0000295;gene_id=HG00642_ch_G0000054;Parent=HG00642_ch_T0000295;transcript_name=HG00642_ch_T0000295;gene_name=SRY;ID=exon:HG00642_ch_T0000295:0;Name=SRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2465306	2465920	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00642_ch_T0000295;gene_id=HG00642_ch_G0000054;Parent=HG00642_ch_T0000295;transcript_name=HG00642_ch_T0000295;gene_name=SRY;ID=CDS:HG00642_ch_T0000295:0;Name=SRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2465306	2465308	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00642_ch_T0000295;gene_id=HG00642_ch_G0000054;Parent=HG00642_ch_T0000295;transcript_name=HG00642_ch_T0000295;gene_name=SRY;ID=stop_codon:HG00642_ch_T0000295;Name=SRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2465918	2465920	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00642_ch_T0000295;gene_id=HG00642_ch_G0000054;Parent=HG00642_ch_T0000295;transcript_name=HG00642_ch_T0000295;gene_name=SRY;ID=start_codon:HG00642_ch_T0000295;Name=SRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2468144	2468645	.	+	.	source_gene_common_name=RNASEH2CP1;source_gene=ENSG00000237659.1;gene_id=HG00642_ch_G0000055;gene_biotype=transcribed_processed_pseudogene;gene_name=RNASEH2CP1;gene_sources=liftoff;ID=HG00642_ch_G0000055;Name=RNASEH2CP1
HG00642_chrY	CAT	transcript	2468144	2468645	1000	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG00642_ch_T0000297;gene_id=HG00642_ch_G0000055;Parent=HG00642_ch_G0000055;transcript_name=HG00642_ch_T0000297;gene_name=RNASEH2CP1;ID=HG00642_ch_T0000297;Name=RNASEH2CP1
HG00642_chrY	CAT	exon	2468144	2468645	.	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG00642_ch_T0000297;gene_id=HG00642_ch_G0000055;Parent=HG00642_ch_T0000297;transcript_name=HG00642_ch_T0000297;gene_name=RNASEH2CP1;ID=exon:HG00642_ch_T0000297:0;Name=RNASEH2CP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2492648	2503794	.	+	.	source_gene_common_name=ENSG00000300312;source_gene=ENSG00000300312.1;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;gene_id=HG00642_ch_G0000056;gene_biotype=lncRNA;gene_name=ENSG00000300312;gene_sources=liftoff;ID=HG00642_ch_G0000056;Name=ENSG00000300312
HG00642_chrY	CAT	transcript	2492648	2503794	1000	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_G0000056;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=HG00642_ch_T0000298;Name=ENSG00000300312
HG00642_chrY	CAT	exon	2492648	2492683	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000298;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000298:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2492684	2502798	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000298;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=intron:HG00642_ch_T0000298:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2502799	2503021	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000298;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000298:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2503022	2503501	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000298;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=intron:HG00642_ch_T0000298:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2503502	2503794	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00642_ch_T0000298;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000298;transcript_name=HG00642_ch_T0000298;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000298:2;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2492648	2502464	1000	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00642_ch_T0000299;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_G0000056;transcript_name=HG00642_ch_T0000299;gene_name=ENSG00000300312;ID=HG00642_ch_T0000299;Name=ENSG00000300312
HG00642_chrY	CAT	exon	2492648	2492683	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00642_ch_T0000299;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000299;transcript_name=HG00642_ch_T0000299;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000299:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2492684	2501758	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00642_ch_T0000299;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000299;transcript_name=HG00642_ch_T0000299;gene_name=ENSG00000300312;ID=intron:HG00642_ch_T0000299:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2501759	2502464	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00642_ch_T0000299;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000299;transcript_name=HG00642_ch_T0000299;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000299:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2502894	2503782	1000	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00642_ch_T0000300;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_G0000056;transcript_name=HG00642_ch_T0000300;gene_name=ENSG00000300312;ID=HG00642_ch_T0000300;Name=ENSG00000300312
HG00642_chrY	CAT	exon	2502894	2503021	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00642_ch_T0000300;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000300;transcript_name=HG00642_ch_T0000300;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000300:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2503022	2503501	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00642_ch_T0000300;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000300;transcript_name=HG00642_ch_T0000300;gene_name=ENSG00000300312;ID=intron:HG00642_ch_T0000300:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2503502	2503782	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00642_ch_T0000300;gene_id=HG00642_ch_G0000056;Parent=HG00642_ch_T0000300;transcript_name=HG00642_ch_T0000300;gene_name=ENSG00000300312;ID=exon:HG00642_ch_T0000300:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2506298	2506534	.	+	.	source_gene_common_name=TOMM22P2;source_gene=ENSG00000232195.1;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;gene_id=HG00642_ch_G0000057;gene_biotype=processed_pseudogene;gene_name=TOMM22P2;gene_sources=liftoff;ID=HG00642_ch_G0000057;Name=TOMM22P2
HG00642_chrY	CAT	transcript	2506298	2506534	1000	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG00642_ch_T0000301;gene_id=HG00642_ch_G0000057;Parent=HG00642_ch_G0000057;transcript_name=HG00642_ch_T0000301;gene_name=TOMM22P2;ID=HG00642_ch_T0000301;Name=TOMM22P2
HG00642_chrY	CAT	exon	2506298	2506534	.	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG00642_ch_T0000301;gene_id=HG00642_ch_G0000057;Parent=HG00642_ch_T0000301;transcript_name=HG00642_ch_T0000301;gene_name=TOMM22P2;ID=exon:HG00642_ch_T0000301:0;Name=TOMM22P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2506508	2519169	.	-	.	source_gene_common_name=ENSG00000286130;source_gene=ENSG00000286130.1;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;gene_id=HG00642_ch_G0000058;gene_biotype=lncRNA;gene_name=ENSG00000286130;gene_sources=liftoff;ID=HG00642_ch_G0000058;Name=ENSG00000286130
HG00642_chrY	CAT	transcript	2506508	2519169	1000	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_G0000058;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=HG00642_ch_T0000302;Name=ENSG00000286130
HG00642_chrY	CAT	exon	2506508	2507051	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_T0000302;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=exon:HG00642_ch_T0000302:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2507052	2507841	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_T0000302;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=intron:HG00642_ch_T0000302:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2507842	2508067	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_T0000302;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=exon:HG00642_ch_T0000302:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2508068	2518788	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_T0000302;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=intron:HG00642_ch_T0000302:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2518789	2519169	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00642_ch_T0000302;gene_id=HG00642_ch_G0000058;Parent=HG00642_ch_T0000302;transcript_name=HG00642_ch_T0000302;gene_name=ENSG00000286130;ID=exon:HG00642_ch_T0000302:2;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2519920	2610673	.	+	.	source_gene_common_name=RPS4Y1;source_gene=ENSG00000129824.16;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;gene_id=HG00642_ch_G0000059;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff;ID=HG00642_ch_G0000059;Name=RPS4Y1
HG00642_chrY	CAT	transcript	2519920	2545586	100	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_G0000059;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=HG00642_ch_T0000303;Name=RPS4Y1
HG00642_chrY	CAT	exon	2519920	2519945	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2519943	2519945	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2519943	2519945	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=start_codon:HG00642_ch_T0000303;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2519946	2520482	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2520483	2520560	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2520483	2520560	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2520561	2522394	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2522395	2522575	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2522395	2522575	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2522576	2523963	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2523964	2524061	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2523964	2524061	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2524062	2532917	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2532918	2533089	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2532918	2533089	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2533090	2543405	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2543406	2543563	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2543406	2543563	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2543564	2545110	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2545111	2545586	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000303:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2545111	2545212	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000303:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2545210	2545212	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00642_ch_T0000303;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000303;transcript_name=HG00642_ch_T0000303;gene_name=RPS4Y1;ID=stop_codon:HG00642_ch_T0000303;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2520238	2545180	100	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_G0000059;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=HG00642_ch_T0000304;Name=RPS4Y1
HG00642_chrY	CAT	exon	2520238	2520291	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2520262	2520291	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2520262	2520264	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=start_codon:HG00642_ch_T0000304;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2520292	2520482	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2520483	2520560	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2520483	2520560	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2520561	2522394	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2522395	2522575	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2522395	2522575	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2522576	2523963	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2523964	2524061	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2523964	2524061	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2524062	2532917	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2532918	2533089	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2532918	2533089	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2533090	2543405	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2543406	2543563	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2543406	2543563	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2543564	2545110	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000304:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2545111	2545180	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000304:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2545111	2545180	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00642_ch_T0000304;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000304;transcript_name=HG00642_ch_T0000304;gene_name=RPS4Y1;ID=CDS:HG00642_ch_T0000304:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2532414	2545274	1000	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_G0000059;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=HG00642_ch_T0000305;Name=RPS4Y1
HG00642_chrY	CAT	exon	2532414	2533089	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000305;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000305:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2533090	2543405	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000305;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000305:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2543406	2543563	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000305;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000305:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2543564	2545110	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000305;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000305:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2545111	2545274	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00642_ch_T0000305;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000305;transcript_name=HG00642_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000305:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2533048	2610673	1000	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_G0000059;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=HG00642_ch_T0000306;Name=RPS4Y1
HG00642_chrY	CAT	exon	2533048	2533089	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000306;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000306:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2533090	2607536	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000306;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000306:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2607537	2607658	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000306;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000306:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2607659	2610383	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000306;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=intron:HG00642_ch_T0000306:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2610384	2610673	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00642_ch_T0000306;gene_id=HG00642_ch_G0000059;Parent=HG00642_ch_T0000306;transcript_name=HG00642_ch_T0000306;gene_name=RPS4Y1;ID=exon:HG00642_ch_T0000306:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2560001	2561970	.	-	.	source_gene_common_name=HSFY3P;source_gene=ENSG00000227289.3;gene_id=HG00642_ch_G0000060;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY3P;gene_sources=liftoff;ID=HG00642_ch_G0000060;Name=HSFY3P
HG00642_chrY	CAT	transcript	2560001	2561970	1000	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00642_ch_T0000307;gene_id=HG00642_ch_G0000060;Parent=HG00642_ch_G0000060;transcript_name=HG00642_ch_T0000307;gene_name=HSFY3P;ID=HG00642_ch_T0000307;Name=HSFY3P
HG00642_chrY	CAT	exon	2560001	2560679	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00642_ch_T0000307;gene_id=HG00642_ch_G0000060;Parent=HG00642_ch_T0000307;transcript_name=HG00642_ch_T0000307;gene_name=HSFY3P;ID=exon:HG00642_ch_T0000307:0;Name=HSFY3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2560680	2561458	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00642_ch_T0000307;gene_id=HG00642_ch_G0000060;Parent=HG00642_ch_T0000307;transcript_name=HG00642_ch_T0000307;gene_name=HSFY3P;ID=intron:HG00642_ch_T0000307:0;Name=HSFY3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2561459	2561970	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00642_ch_T0000307;gene_id=HG00642_ch_G0000060;Parent=HG00642_ch_T0000307;transcript_name=HG00642_ch_T0000307;gene_name=HSFY3P;ID=exon:HG00642_ch_T0000307:1;Name=HSFY3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2561428	2568869	.	-	.	source_gene_common_name=ENSG00000290841;source_gene=ENSG00000290841.1;gene_id=HG00642_ch_G0000061;gene_biotype=lncRNA;gene_name=ENSG00000290841;gene_sources=liftoff;ID=HG00642_ch_G0000061;Name=ENSG00000290841
HG00642_chrY	CAT	transcript	2561428	2568869	1000	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_G0000061;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=HG00642_ch_T0000308;Name=ENSG00000290841
HG00642_chrY	CAT	exon	2561428	2561725	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=exon:HG00642_ch_T0000308:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2561726	2565460	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=intron:HG00642_ch_T0000308:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2565461	2565561	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=exon:HG00642_ch_T0000308:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2565562	2566762	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=intron:HG00642_ch_T0000308:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2566763	2566880	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=exon:HG00642_ch_T0000308:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2566881	2568739	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=intron:HG00642_ch_T0000308:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2568740	2568869	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00642_ch_T0000308;gene_id=HG00642_ch_G0000061;Parent=HG00642_ch_T0000308;transcript_name=HG00642_ch_T0000308;gene_name=ENSG00000290841;ID=exon:HG00642_ch_T0000308:3;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2607674	2609793	.	-	.	source_gene_common_name=NAP1L1P2;source_gene=ENSG00000229163.2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;gene_id=HG00642_ch_G0000062;gene_biotype=processed_pseudogene;gene_name=NAP1L1P2;gene_sources=liftoff;ID=HG00642_ch_G0000062;Name=NAP1L1P2
HG00642_chrY	CAT	transcript	2607674	2609793	1000	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_G0000062;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=HG00642_ch_T0000309;Name=NAP1L1P2
HG00642_chrY	CAT	exon	2607674	2607715	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_T0000309;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=exon:HG00642_ch_T0000309:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2607716	2608042	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_T0000309;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=intron:HG00642_ch_T0000309:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2608043	2609039	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_T0000309;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=exon:HG00642_ch_T0000309:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2609040	2609743	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_T0000309;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=intron:HG00642_ch_T0000309:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2609744	2609793	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00642_ch_T0000309;gene_id=HG00642_ch_G0000062;Parent=HG00642_ch_T0000309;transcript_name=HG00642_ch_T0000309;gene_name=NAP1L1P2;ID=exon:HG00642_ch_T0000309:2;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2613079	2613444	.	-	.	source_gene_common_name=ENSG00000278847;source_gene=ENSG00000278847.1;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;gene_id=HG00642_ch_G0000063;gene_biotype=lncRNA;gene_name=ENSG00000278847;gene_sources=liftoff;ID=HG00642_ch_G0000063;Name=ENSG00000278847
HG00642_chrY	CAT	transcript	2613079	2613444	1000	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG00642_ch_T0000310;gene_id=HG00642_ch_G0000063;Parent=HG00642_ch_G0000063;transcript_name=HG00642_ch_T0000310;gene_name=ENSG00000278847;ID=HG00642_ch_T0000310;Name=ENSG00000278847
HG00642_chrY	CAT	exon	2613079	2613444	.	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG00642_ch_T0000310;gene_id=HG00642_ch_G0000063;Parent=HG00642_ch_T0000310;transcript_name=HG00642_ch_T0000310;gene_name=ENSG00000278847;ID=exon:HG00642_ch_T0000310:0;Name=ENSG00000278847;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2613955	2661179	.	+	.	source_gene_common_name=ZFY;source_gene=ENSG00000067646.12;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;gene_id=HG00642_ch_G0000064;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff;ID=HG00642_ch_G0000064;Name=ZFY
HG00642_chrY	CAT	transcript	2613955	2661179	100	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=HG00642_ch_T0000311;Name=ZFY
HG00642_chrY	CAT	exon	2613955	2614120	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614121	2632578	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2632579	2632667	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2632607	2632667	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2632607	2632609	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=start_codon:HG00642_ch_T0000311;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2632668	2639744	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2639745	2640317	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2639745	2640317	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2640318	2653765	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2653766	2653915	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2653766	2653915	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2653916	2654181	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2654182	2654325	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2654182	2654325	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2654326	2655340	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2655341	2655493	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2655341	2655493	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2655494	2656612	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2656613	2656753	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2656613	2656753	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2656754	2657482	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=intron:HG00642_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2657483	2661179	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=exon:HG00642_ch_T0000311:7;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2657483	2658666	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=CDS:HG00642_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2658664	2658666	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00642_ch_T0000311;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000311;transcript_name=HG00642_ch_T0000311;gene_name=ZFY;ID=stop_codon:HG00642_ch_T0000311;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2614055	2661179	100	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=HG00642_ch_T0000312;Name=ZFY
HG00642_chrY	CAT	exon	2614055	2614443	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614444	2632578	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2632579	2632667	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2632607	2632667	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2632607	2632609	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=start_codon:HG00642_ch_T0000312;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2632668	2639744	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2639745	2640317	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2639745	2640317	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2640318	2653765	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2653766	2653915	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2653766	2653915	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2653916	2654181	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2654182	2654325	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2654182	2654325	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2654326	2655340	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2655341	2655493	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2655341	2655493	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2655494	2656612	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2656613	2656753	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2656613	2656753	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2656754	2657482	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=intron:HG00642_ch_T0000312:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2657483	2661179	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=exon:HG00642_ch_T0000312:7;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2657483	2658666	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=CDS:HG00642_ch_T0000312:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2658664	2658666	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00642_ch_T0000312;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000312;transcript_name=HG00642_ch_T0000312;gene_name=ZFY;ID=stop_codon:HG00642_ch_T0000312;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2614063	2659020	100	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=HG00642_ch_T0000313;Name=ZFY
HG00642_chrY	CAT	exon	2614063	2614120	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614121	2632578	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2632579	2632667	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2632607	2632667	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2632607	2632609	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=start_codon:HG00642_ch_T0000313;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2632668	2653765	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2653766	2653915	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2653766	2653915	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2653916	2654181	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2654182	2654325	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2654182	2654325	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2654326	2655340	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2655341	2655493	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2655341	2655493	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2655494	2656612	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2656613	2656753	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2656613	2656753	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2656754	2657482	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=intron:HG00642_ch_T0000313:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2657483	2659020	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=exon:HG00642_ch_T0000313:6;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2657483	2658666	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=CDS:HG00642_ch_T0000313:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2658664	2658666	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00642_ch_T0000313;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000313;transcript_name=HG00642_ch_T0000313;gene_name=ZFY;ID=stop_codon:HG00642_ch_T0000313;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2614174	2656726	1000	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=HG00642_ch_T0000314;Name=ZFY
HG00642_chrY	CAT	exon	2614174	2614443	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=exon:HG00642_ch_T0000314:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614444	2653765	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=intron:HG00642_ch_T0000314:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2653766	2653915	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=exon:HG00642_ch_T0000314:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2653916	2654181	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=intron:HG00642_ch_T0000314:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2654182	2654325	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=exon:HG00642_ch_T0000314:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2654326	2656612	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=intron:HG00642_ch_T0000314:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2656613	2656726	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00642_ch_T0000314;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000314;transcript_name=HG00642_ch_T0000314;gene_name=ZFY;ID=exon:HG00642_ch_T0000314:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2614179	2639957	100	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=HG00642_ch_T0000315;Name=ZFY
HG00642_chrY	CAT	exon	2614179	2614443	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=exon:HG00642_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614444	2632578	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=intron:HG00642_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2632579	2632667	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=exon:HG00642_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2632607	2632667	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=CDS:HG00642_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2632607	2632609	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=start_codon:HG00642_ch_T0000315;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2632668	2639744	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=intron:HG00642_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2639745	2639957	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=exon:HG00642_ch_T0000315:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2639745	2639957	.	+	2	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00642_ch_T0000315;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000315;transcript_name=HG00642_ch_T0000315;gene_name=ZFY;ID=CDS:HG00642_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2614325	2659819	100	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=HG00642_ch_T0000316;Name=ZFY
HG00642_chrY	CAT	exon	2614325	2614443	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2614444	2639744	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=intron:HG00642_ch_T0000316:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2639745	2640317	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2639762	2640317	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=CDS:HG00642_ch_T0000316:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	2639762	2639764	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=start_codon:HG00642_ch_T0000316;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2640318	2653765	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=intron:HG00642_ch_T0000316:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2653766	2653915	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2653766	2653915	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=CDS:HG00642_ch_T0000316:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2653916	2654181	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=intron:HG00642_ch_T0000316:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2654182	2654325	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2654182	2654325	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=CDS:HG00642_ch_T0000316:2;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2654326	2656612	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=intron:HG00642_ch_T0000316:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2656613	2656753	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2656613	2656753	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=CDS:HG00642_ch_T0000316:3;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2656754	2657482	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=intron:HG00642_ch_T0000316:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2657483	2659819	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=exon:HG00642_ch_T0000316:5;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	2657483	2658666	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=CDS:HG00642_ch_T0000316:4;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	2658664	2658666	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00642_ch_T0000316;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000316;transcript_name=HG00642_ch_T0000316;gene_name=ZFY;ID=stop_codon:HG00642_ch_T0000316;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2656492	2658023	1000	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00642_ch_T0000318;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_G0000064;transcript_name=HG00642_ch_T0000318;gene_name=ZFY;ID=HG00642_ch_T0000318;Name=ZFY
HG00642_chrY	CAT	exon	2656492	2656753	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00642_ch_T0000318;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000318;transcript_name=HG00642_ch_T0000318;gene_name=ZFY;ID=exon:HG00642_ch_T0000318:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2656754	2657482	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00642_ch_T0000318;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000318;transcript_name=HG00642_ch_T0000318;gene_name=ZFY;ID=intron:HG00642_ch_T0000318:0;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2657483	2658023	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00642_ch_T0000318;gene_id=HG00642_ch_G0000064;Parent=HG00642_ch_T0000318;transcript_name=HG00642_ch_T0000318;gene_name=ZFY;ID=exon:HG00642_ch_T0000318:1;Name=ZFY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2645500	2681244	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=ENSG00000233070.2;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;gene_id=HG00642_ch_G0000065;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG00642_ch_G0000065;Name=ZFY-AS1
HG00642_chrY	CAT	transcript	2645500	2681491	1000	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_G0000065;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=HG00642_ch_T0000317;Name=ZFY-AS1
HG00642_chrY	CAT	exon	2645500	2645610	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000317;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000317:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2645611	2660510	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000317;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=intron:HG00642_ch_T0000317:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2660511	2660600	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000317;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000317:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2660601	2680985	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000317;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=intron:HG00642_ch_T0000317:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2680986	2681491	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00642_ch_T0000317;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000317;transcript_name=HG00642_ch_T0000317;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000317:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2680299	2681474	1000	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00642_ch_T0000320;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_G0000065;transcript_name=HG00642_ch_T0000320;gene_name=ZFY-AS1;ID=HG00642_ch_T0000320;Name=ZFY-AS1
HG00642_chrY	CAT	exon	2680299	2680596	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00642_ch_T0000320;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000320;transcript_name=HG00642_ch_T0000320;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000320:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2680597	2680985	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00642_ch_T0000320;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000320;transcript_name=HG00642_ch_T0000320;gene_name=ZFY-AS1;ID=intron:HG00642_ch_T0000320:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2680986	2681474	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00642_ch_T0000320;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000320;transcript_name=HG00642_ch_T0000320;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000320:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2680301	2681244	1000	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_G0000065;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=HG00642_ch_T0000321;Name=ZFY-AS1
HG00642_chrY	CAT	exon	2680301	2680596	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000321;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000321:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2680597	2680985	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000321;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=intron:HG00642_ch_T0000321:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2680986	2681074	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000321;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000321:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681075	2681210	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000321;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=intron:HG00642_ch_T0000321:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2681211	2681244	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00642_ch_T0000321;gene_id=HG00642_ch_G0000065;Parent=HG00642_ch_T0000321;transcript_name=HG00642_ch_T0000321;gene_name=ZFY-AS1;ID=exon:HG00642_ch_T0000321:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2673740	2673946	.	-	.	source_gene_common_name=EEF1A1P41;source_gene=ENSG00000223600.1;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;gene_id=HG00642_ch_G0000066;gene_biotype=processed_pseudogene;gene_name=EEF1A1P41;gene_sources=liftoff;ID=HG00642_ch_G0000066;Name=EEF1A1P41
HG00642_chrY	CAT	transcript	2673740	2673946	1000	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG00642_ch_T0000319;gene_id=HG00642_ch_G0000066;Parent=HG00642_ch_G0000066;transcript_name=HG00642_ch_T0000319;gene_name=EEF1A1P41;ID=HG00642_ch_T0000319;Name=EEF1A1P41
HG00642_chrY	CAT	exon	2673740	2673946	.	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG00642_ch_T0000319;gene_id=HG00642_ch_G0000066;Parent=HG00642_ch_T0000319;transcript_name=HG00642_ch_T0000319;gene_name=EEF1A1P41;ID=exon:HG00642_ch_T0000319:0;Name=EEF1A1P41;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2681560	2879171	.	+	.	source_gene_common_name=LINC00278;source_gene=ENSG00000231535.9;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;gene_id=HG00642_ch_G0000067;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG00642_ch_G0000067;Name=LINC00278
HG00642_chrY	CAT	transcript	2681560	2682699	1000	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG00642_ch_T0000322;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000322;gene_name=LINC00278;ID=HG00642_ch_T0000322;Name=LINC00278
HG00642_chrY	CAT	exon	2681560	2682699	.	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG00642_ch_T0000322;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000322;transcript_name=HG00642_ch_T0000322;gene_name=LINC00278;ID=exon:HG00642_ch_T0000322:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681560	2799280	1000	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=HG00642_ch_T0000323;Name=LINC00278
HG00642_chrY	CAT	exon	2681560	2681890	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=intron:HG00642_ch_T0000323:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2757944	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=intron:HG00642_ch_T0000323:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775660	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=intron:HG00642_ch_T0000323:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775661	2775719	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2789945	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=intron:HG00642_ch_T0000323:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2799096	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=intron:HG00642_ch_T0000323:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2799097	2799280	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00642_ch_T0000323;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000323;transcript_name=HG00642_ch_T0000323;gene_name=LINC00278;ID=exon:HG00642_ch_T0000323:5;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681560	2879171	1000	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00642_ch_T0000324;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000324;gene_name=LINC00278;ID=HG00642_ch_T0000324;Name=LINC00278
HG00642_chrY	CAT	exon	2681560	2681890	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00642_ch_T0000324;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000324;transcript_name=HG00642_ch_T0000324;gene_name=LINC00278;ID=exon:HG00642_ch_T0000324:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2878161	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00642_ch_T0000324;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000324;transcript_name=HG00642_ch_T0000324;gene_name=LINC00278;ID=intron:HG00642_ch_T0000324:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2878162	2879171	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00642_ch_T0000324;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000324;transcript_name=HG00642_ch_T0000324;gene_name=LINC00278;ID=exon:HG00642_ch_T0000324:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681567	2776484	1000	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=HG00642_ch_T0000325;Name=LINC00278
HG00642_chrY	CAT	exon	2681567	2681890	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000325;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=exon:HG00642_ch_T0000325:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2757944	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000325;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=intron:HG00642_ch_T0000325:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000325;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=exon:HG00642_ch_T0000325:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000325;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=intron:HG00642_ch_T0000325:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2776484	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00642_ch_T0000325;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000325;transcript_name=HG00642_ch_T0000325;gene_name=LINC00278;ID=exon:HG00642_ch_T0000325:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681567	2879171	1000	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=HG00642_ch_T0000326;Name=LINC00278
HG00642_chrY	CAT	exon	2681567	2681890	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=exon:HG00642_ch_T0000326:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=intron:HG00642_ch_T0000326:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=exon:HG00642_ch_T0000326:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2757944	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=intron:HG00642_ch_T0000326:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=exon:HG00642_ch_T0000326:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=intron:HG00642_ch_T0000326:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=exon:HG00642_ch_T0000326:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2878161	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=intron:HG00642_ch_T0000326:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2878162	2879171	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00642_ch_T0000326;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000326;transcript_name=HG00642_ch_T0000326;gene_name=LINC00278;ID=exon:HG00642_ch_T0000326:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681567	2799366	1000	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=HG00642_ch_T0000327;Name=LINC00278
HG00642_chrY	CAT	exon	2681567	2681890	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2757944	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=intron:HG00642_ch_T0000327:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=intron:HG00642_ch_T0000327:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2780747	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=intron:HG00642_ch_T0000327:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2780748	2780857	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2780858	2789945	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=intron:HG00642_ch_T0000327:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2799096	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=intron:HG00642_ch_T0000327:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2799097	2799366	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00642_ch_T0000327;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000327;transcript_name=HG00642_ch_T0000327;gene_name=LINC00278;ID=exon:HG00642_ch_T0000327:5;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681567	2738905	1000	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00642_ch_T0000328;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000328;gene_name=LINC00278;ID=HG00642_ch_T0000328;Name=LINC00278
HG00642_chrY	CAT	exon	2681567	2681890	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00642_ch_T0000328;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000328;transcript_name=HG00642_ch_T0000328;gene_name=LINC00278;ID=exon:HG00642_ch_T0000328:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00642_ch_T0000328;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000328;transcript_name=HG00642_ch_T0000328;gene_name=LINC00278;ID=intron:HG00642_ch_T0000328:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2738905	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00642_ch_T0000328;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000328;transcript_name=HG00642_ch_T0000328;gene_name=LINC00278;ID=exon:HG00642_ch_T0000328:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681572	2792520	1000	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=HG00642_ch_T0000329;Name=LINC00278
HG00642_chrY	CAT	exon	2681572	2681890	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=exon:HG00642_ch_T0000329:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=intron:HG00642_ch_T0000329:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=exon:HG00642_ch_T0000329:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2775660	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=intron:HG00642_ch_T0000329:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775661	2775719	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=exon:HG00642_ch_T0000329:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2789945	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=intron:HG00642_ch_T0000329:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=exon:HG00642_ch_T0000329:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2792332	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=intron:HG00642_ch_T0000329:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2792333	2792520	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00642_ch_T0000329;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000329;transcript_name=HG00642_ch_T0000329;gene_name=LINC00278;ID=exon:HG00642_ch_T0000329:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681574	2799280	1000	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=HG00642_ch_T0000330;Name=LINC00278
HG00642_chrY	CAT	exon	2681574	2681890	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=exon:HG00642_ch_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=intron:HG00642_ch_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=exon:HG00642_ch_T0000330:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2757944	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=intron:HG00642_ch_T0000330:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=exon:HG00642_ch_T0000330:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=intron:HG00642_ch_T0000330:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=exon:HG00642_ch_T0000330:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2799096	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=intron:HG00642_ch_T0000330:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2799097	2799280	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00642_ch_T0000330;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000330;transcript_name=HG00642_ch_T0000330;gene_name=LINC00278;ID=exon:HG00642_ch_T0000330:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681574	2839517	1000	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=HG00642_ch_T0000331;Name=LINC00278
HG00642_chrY	CAT	exon	2681574	2681890	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=exon:HG00642_ch_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2693576	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=intron:HG00642_ch_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2693577	2693759	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=exon:HG00642_ch_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2693760	2737317	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=intron:HG00642_ch_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=exon:HG00642_ch_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2775660	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=intron:HG00642_ch_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775661	2775719	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=exon:HG00642_ch_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2839337	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=intron:HG00642_ch_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2839338	2839517	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00642_ch_T0000331;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000331;transcript_name=HG00642_ch_T0000331;gene_name=LINC00278;ID=exon:HG00642_ch_T0000331:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681574	2776237	1000	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=HG00642_ch_T0000332;Name=LINC00278
HG00642_chrY	CAT	exon	2681574	2681890	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=exon:HG00642_ch_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=intron:HG00642_ch_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=exon:HG00642_ch_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2757944	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=intron:HG00642_ch_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=exon:HG00642_ch_T0000332:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=intron:HG00642_ch_T0000332:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2776237	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00642_ch_T0000332;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000332;transcript_name=HG00642_ch_T0000332;gene_name=LINC00278;ID=exon:HG00642_ch_T0000332:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681579	2780935	1000	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=HG00642_ch_T0000333;Name=LINC00278
HG00642_chrY	CAT	exon	2681579	2681890	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=exon:HG00642_ch_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2757944	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=intron:HG00642_ch_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=exon:HG00642_ch_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=intron:HG00642_ch_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=exon:HG00642_ch_T0000333:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2780747	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=intron:HG00642_ch_T0000333:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2780748	2780935	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00642_ch_T0000333;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000333;transcript_name=HG00642_ch_T0000333;gene_name=LINC00278;ID=exon:HG00642_ch_T0000333:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681579	2776249	1000	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00642_ch_T0000334;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000334;gene_name=LINC00278;ID=HG00642_ch_T0000334;Name=LINC00278
HG00642_chrY	CAT	exon	2681579	2681890	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00642_ch_T0000334;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000334;transcript_name=HG00642_ch_T0000334;gene_name=LINC00278;ID=exon:HG00642_ch_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2775657	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00642_ch_T0000334;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000334;transcript_name=HG00642_ch_T0000334;gene_name=LINC00278;ID=intron:HG00642_ch_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2776249	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00642_ch_T0000334;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000334;transcript_name=HG00642_ch_T0000334;gene_name=LINC00278;ID=exon:HG00642_ch_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681585	2799363	1000	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=HG00642_ch_T0000335;Name=LINC00278
HG00642_chrY	CAT	exon	2681585	2681890	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=intron:HG00642_ch_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2775657	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=intron:HG00642_ch_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2780747	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=intron:HG00642_ch_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2780748	2780857	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2780858	2789945	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=intron:HG00642_ch_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2799096	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=intron:HG00642_ch_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2799097	2799363	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00642_ch_T0000335;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000335;transcript_name=HG00642_ch_T0000335;gene_name=LINC00278;ID=exon:HG00642_ch_T0000335:5;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681585	2792520	1000	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=HG00642_ch_T0000336;Name=LINC00278
HG00642_chrY	CAT	exon	2681585	2681890	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=exon:HG00642_ch_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=intron:HG00642_ch_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=exon:HG00642_ch_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2789945	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=intron:HG00642_ch_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=exon:HG00642_ch_T0000336:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2792332	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=intron:HG00642_ch_T0000336:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2792333	2792520	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00642_ch_T0000336;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000336;transcript_name=HG00642_ch_T0000336;gene_name=LINC00278;ID=exon:HG00642_ch_T0000336:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681585	2792520	1000	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=HG00642_ch_T0000337;Name=LINC00278
HG00642_chrY	CAT	exon	2681585	2681890	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=intron:HG00642_ch_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2757944	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=intron:HG00642_ch_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=intron:HG00642_ch_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2789945	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=intron:HG00642_ch_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2789946	2790011	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2790012	2792332	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=intron:HG00642_ch_T0000337:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2792333	2792520	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00642_ch_T0000337;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000337;transcript_name=HG00642_ch_T0000337;gene_name=LINC00278;ID=exon:HG00642_ch_T0000337:5;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681674	2788978	1000	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=HG00642_ch_T0000338;Name=LINC00278
HG00642_chrY	CAT	exon	2681674	2681890	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=exon:HG00642_ch_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2737317	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=intron:HG00642_ch_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2737318	2737445	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=exon:HG00642_ch_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2737446	2775657	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=intron:HG00642_ch_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=exon:HG00642_ch_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2780747	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=intron:HG00642_ch_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2780748	2780857	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=exon:HG00642_ch_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2780858	2788480	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=intron:HG00642_ch_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2788481	2788978	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00642_ch_T0000338;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000338;transcript_name=HG00642_ch_T0000338;gene_name=LINC00278;ID=exon:HG00642_ch_T0000338:4;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	2681682	2789784	1000	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_G0000067;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=HG00642_ch_T0000339;Name=LINC00278
HG00642_chrY	CAT	exon	2681682	2681890	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=exon:HG00642_ch_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2681891	2757944	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=intron:HG00642_ch_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2757945	2758002	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=exon:HG00642_ch_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2758003	2775657	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=intron:HG00642_ch_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2775658	2775719	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=exon:HG00642_ch_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	2775720	2788480	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=intron:HG00642_ch_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	2788481	2789784	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00642_ch_T0000339;gene_id=HG00642_ch_G0000067;Parent=HG00642_ch_T0000339;transcript_name=HG00642_ch_T0000339;gene_name=LINC00278;ID=exon:HG00642_ch_T0000339:3;Name=LINC00278;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	2972475	2973493	.	+	.	source_gene_common_name=AGPAT5P1;source_gene=ENSG00000234652.1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;gene_id=HG00642_ch_G0000068;gene_biotype=processed_pseudogene;gene_name=AGPAT5P1;gene_sources=liftoff;ID=HG00642_ch_G0000068;Name=AGPAT5P1
HG00642_chrY	CAT	transcript	2972475	2973493	1000	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG00642_ch_T0000340;gene_id=HG00642_ch_G0000068;Parent=HG00642_ch_G0000068;transcript_name=HG00642_ch_T0000340;gene_name=AGPAT5P1;ID=HG00642_ch_T0000340;Name=AGPAT5P1
HG00642_chrY	CAT	exon	2972475	2973493	.	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG00642_ch_T0000340;gene_id=HG00642_ch_G0000068;Parent=HG00642_ch_T0000340;transcript_name=HG00642_ch_T0000340;gene_name=AGPAT5P1;ID=exon:HG00642_ch_T0000340:0;Name=AGPAT5P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3228315	3228473	.	-	.	source_gene_common_name=PRRC2CP1;source_gene=ENSG00000216777.1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;gene_id=HG00642_ch_G0000069;gene_biotype=processed_pseudogene;gene_name=PRRC2CP1;gene_sources=liftoff;ID=HG00642_ch_G0000069;Name=PRRC2CP1
HG00642_chrY	CAT	transcript	3228315	3228473	1000	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG00642_ch_T0000341;gene_id=HG00642_ch_G0000069;Parent=HG00642_ch_G0000069;transcript_name=HG00642_ch_T0000341;gene_name=PRRC2CP1;ID=HG00642_ch_T0000341;Name=PRRC2CP1
HG00642_chrY	CAT	exon	3228315	3228473	.	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG00642_ch_T0000341;gene_id=HG00642_ch_G0000069;Parent=HG00642_ch_T0000341;transcript_name=HG00642_ch_T0000341;gene_name=PRRC2CP1;ID=exon:HG00642_ch_T0000341:0;Name=PRRC2CP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3257734	3258708	.	+	.	source_gene_common_name=TGIF2LY;source_gene=ENSG00000176679.9;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;gene_id=HG00642_ch_G0000070;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff;ID=HG00642_ch_G0000070;Name=TGIF2LY
HG00642_chrY	CAT	transcript	3257734	3258708	100	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_G0000070;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=HG00642_ch_T0000342;Name=TGIF2LY
HG00642_chrY	CAT	exon	3257734	3257794	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=exon:HG00642_ch_T0000342:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3257795	3257890	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=intron:HG00642_ch_T0000342:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3257891	3258708	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=exon:HG00642_ch_T0000342:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	3257912	3258469	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=CDS:HG00642_ch_T0000342:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	3257912	3257914	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=start_codon:HG00642_ch_T0000342;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	3258467	3258469	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00642_ch_T0000342;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000342;transcript_name=HG00642_ch_T0000342;gene_name=TGIF2LY;ID=stop_codon:HG00642_ch_T0000342;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3257782	3258708	100	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00642_ch_T0000343;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_G0000070;transcript_name=HG00642_ch_T0000343;gene_name=TGIF2LY;ID=HG00642_ch_T0000343;Name=TGIF2LY
HG00642_chrY	CAT	exon	3257782	3258708	.	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00642_ch_T0000343;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000343;transcript_name=HG00642_ch_T0000343;gene_name=TGIF2LY;ID=exon:HG00642_ch_T0000343:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	3257912	3258469	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00642_ch_T0000343;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000343;transcript_name=HG00642_ch_T0000343;gene_name=TGIF2LY;ID=CDS:HG00642_ch_T0000343:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	3257912	3257914	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00642_ch_T0000343;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000343;transcript_name=HG00642_ch_T0000343;gene_name=TGIF2LY;ID=start_codon:HG00642_ch_T0000343;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	3258467	3258469	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00642_ch_T0000343;gene_id=HG00642_ch_G0000070;Parent=HG00642_ch_T0000343;transcript_name=HG00642_ch_T0000343;gene_name=TGIF2LY;ID=stop_codon:HG00642_ch_T0000343;Name=TGIF2LY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3361474	3362537	.	+	.	source_gene_common_name=USP12PY;source_gene=ENSG00000232927.1;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;gene_id=HG00642_ch_G0000071;gene_biotype=processed_pseudogene;gene_name=USP12PY;gene_sources=liftoff;ID=HG00642_ch_G0000071;Name=USP12PY
HG00642_chrY	CAT	transcript	3361474	3362537	1000	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG00642_ch_T0000344;gene_id=HG00642_ch_G0000071;Parent=HG00642_ch_G0000071;transcript_name=HG00642_ch_T0000344;gene_name=USP12PY;ID=HG00642_ch_T0000344;Name=USP12PY
HG00642_chrY	CAT	exon	3361474	3362537	.	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG00642_ch_T0000344;gene_id=HG00642_ch_G0000071;Parent=HG00642_ch_T0000344;transcript_name=HG00642_ch_T0000344;gene_name=USP12PY;ID=exon:HG00642_ch_T0000344:0;Name=USP12PY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3454871	3543581	.	+	.	source_gene_common_name=ENSG00000286050;source_gene=ENSG00000286050.2;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;gene_id=HG00642_ch_G0000072;gene_biotype=lncRNA;gene_name=ENSG00000286050;gene_sources=liftoff;ID=HG00642_ch_G0000072;Name=ENSG00000286050
HG00642_chrY	CAT	transcript	3454871	3513198	1000	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_G0000072;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=HG00642_ch_T0000345;Name=ENSG00000286050
HG00642_chrY	CAT	exon	3454871	3455015	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000345:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3455016	3482506	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000345:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3482507	3482630	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000345:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3482631	3483062	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000345:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3483063	3483174	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000345:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3483175	3511092	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000345:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3511093	3511147	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000345:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3511148	3513043	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000345:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3513044	3513198	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00642_ch_T0000345;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000345;transcript_name=HG00642_ch_T0000345;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000345:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3464952	3543581	1000	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_G0000072;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=HG00642_ch_T0000347;Name=ENSG00000286050
HG00642_chrY	CAT	exon	3464952	3465060	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3465061	3482506	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000347:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3482507	3482630	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3482631	3483062	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000347:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3483063	3483174	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3483175	3542261	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000347:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3542262	3542382	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3542383	3542520	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000347:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3542521	3542614	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3542615	3543080	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000347:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3543081	3543581	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00642_ch_T0000347;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000347;transcript_name=HG00642_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000347:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3464953	3515451	1000	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_G0000072;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=HG00642_ch_T0000348;Name=ENSG00000286050
HG00642_chrY	CAT	exon	3464953	3465060	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000348:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3465061	3482506	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000348:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3482507	3482630	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000348:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3482631	3483062	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000348:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3483063	3483174	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000348:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3483175	3514147	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000348:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3514148	3514217	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000348:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3514218	3514677	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000348:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3514678	3515451	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00642_ch_T0000348;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000348;transcript_name=HG00642_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000348:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3465015	3515449	1000	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_G0000072;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=HG00642_ch_T0000349;Name=ENSG00000286050
HG00642_chrY	CAT	exon	3465015	3465060	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3465061	3479328	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000349:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3479329	3479424	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3479425	3482506	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000349:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3482507	3482630	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3482631	3483062	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000349:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3483063	3483174	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3483175	3514147	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000349:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3514148	3514217	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3514218	3514677	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000349:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3514678	3515449	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00642_ch_T0000349;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000349;transcript_name=HG00642_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000349:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3479367	3513198	1000	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_G0000072;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=HG00642_ch_T0000350;Name=ENSG00000286050
HG00642_chrY	CAT	exon	3479367	3479424	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000350:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3479425	3482506	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000350:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3482507	3482630	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000350:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3482631	3483062	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000350:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3483063	3483174	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000350:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3483175	3511092	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000350:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3511093	3511147	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000350:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3511148	3513043	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=intron:HG00642_ch_T0000350:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3513044	3513198	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00642_ch_T0000350;gene_id=HG00642_ch_G0000072;Parent=HG00642_ch_T0000350;transcript_name=HG00642_ch_T0000350;gene_name=ENSG00000286050;ID=exon:HG00642_ch_T0000350:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3456667	3458216	.	-	.	source_gene_common_name=RNF19BPY;source_gene=ENSG00000225653.1;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;gene_id=HG00642_ch_G0000073;gene_biotype=processed_pseudogene;gene_name=RNF19BPY;gene_sources=liftoff;ID=HG00642_ch_G0000073;Name=RNF19BPY
HG00642_chrY	CAT	transcript	3456667	3458216	1000	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG00642_ch_T0000346;gene_id=HG00642_ch_G0000073;Parent=HG00642_ch_G0000073;transcript_name=HG00642_ch_T0000346;gene_name=RNF19BPY;ID=HG00642_ch_T0000346;Name=RNF19BPY
HG00642_chrY	CAT	exon	3456667	3458216	.	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG00642_ch_T0000346;gene_id=HG00642_ch_G0000073;Parent=HG00642_ch_T0000346;transcript_name=HG00642_ch_T0000346;gene_name=RNF19BPY;ID=exon:HG00642_ch_T0000346:0;Name=RNF19BPY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3529908	3531553	.	-	.	source_gene_common_name=ENSG00000218410;source_gene=ENSG00000218410.1;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;gene_id=HG00642_ch_G0000074;gene_biotype=processed_pseudogene;gene_name=ENSG00000218410;gene_sources=liftoff;ID=HG00642_ch_G0000074;Name=ENSG00000218410
HG00642_chrY	CAT	transcript	3529908	3531553	1000	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG00642_ch_T0000351;gene_id=HG00642_ch_G0000074;Parent=HG00642_ch_G0000074;transcript_name=HG00642_ch_T0000351;gene_name=ENSG00000218410;ID=HG00642_ch_T0000351;Name=ENSG00000218410
HG00642_chrY	CAT	exon	3529908	3531553	.	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG00642_ch_T0000351;gene_id=HG00642_ch_G0000074;Parent=HG00642_ch_T0000351;transcript_name=HG00642_ch_T0000351;gene_name=ENSG00000218410;ID=exon:HG00642_ch_T0000351:0;Name=ENSG00000218410;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3544990	3545406	.	-	.	source_gene_common_name=UBE2V1P3;source_gene=ENSG00000229518.1;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;gene_id=HG00642_ch_G0000075;gene_biotype=processed_pseudogene;gene_name=UBE2V1P3;gene_sources=liftoff;ID=HG00642_ch_G0000075;Name=UBE2V1P3
HG00642_chrY	CAT	transcript	3544990	3545406	1000	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG00642_ch_T0000352;gene_id=HG00642_ch_G0000075;Parent=HG00642_ch_G0000075;transcript_name=HG00642_ch_T0000352;gene_name=UBE2V1P3;ID=HG00642_ch_T0000352;Name=UBE2V1P3
HG00642_chrY	CAT	exon	3544990	3545406	.	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG00642_ch_T0000352;gene_id=HG00642_ch_G0000075;Parent=HG00642_ch_T0000352;transcript_name=HG00642_ch_T0000352;gene_name=UBE2V1P3;ID=exon:HG00642_ch_T0000352:0;Name=UBE2V1P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3717271	3781549	.	+	.	source_gene_common_name=ENSG00000229308;source_gene=ENSG00000229308.2;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;gene_id=HG00642_ch_G0000076;gene_biotype=lncRNA;gene_name=ENSG00000229308;gene_sources=liftoff;ID=HG00642_ch_G0000076;Name=ENSG00000229308
HG00642_chrY	CAT	transcript	3717271	3781549	1000	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00642_ch_T0000353;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_G0000076;transcript_name=HG00642_ch_T0000353;gene_name=ENSG00000229308;ID=HG00642_ch_T0000353;Name=ENSG00000229308
HG00642_chrY	CAT	exon	3717271	3717335	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00642_ch_T0000353;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000353;transcript_name=HG00642_ch_T0000353;gene_name=ENSG00000229308;ID=exon:HG00642_ch_T0000353:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3717336	3780915	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00642_ch_T0000353;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000353;transcript_name=HG00642_ch_T0000353;gene_name=ENSG00000229308;ID=intron:HG00642_ch_T0000353:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3780916	3781549	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00642_ch_T0000353;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000353;transcript_name=HG00642_ch_T0000353;gene_name=ENSG00000229308;ID=exon:HG00642_ch_T0000353:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	3717388	3781549	1000	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00642_ch_T0000354;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_G0000076;transcript_name=HG00642_ch_T0000354;gene_name=ENSG00000229308;ID=HG00642_ch_T0000354;Name=ENSG00000229308
HG00642_chrY	CAT	exon	3717388	3717656	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00642_ch_T0000354;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000354;transcript_name=HG00642_ch_T0000354;gene_name=ENSG00000229308;ID=exon:HG00642_ch_T0000354:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	3717657	3780915	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00642_ch_T0000354;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000354;transcript_name=HG00642_ch_T0000354;gene_name=ENSG00000229308;ID=intron:HG00642_ch_T0000354:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	3780916	3781549	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00642_ch_T0000354;gene_id=HG00642_ch_G0000076;Parent=HG00642_ch_T0000354;transcript_name=HG00642_ch_T0000354;gene_name=ENSG00000229308;ID=exon:HG00642_ch_T0000354:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	3855915	3856020	.	-	.	source_gene_common_name=RNU6-303P;source_gene=ENSG00000252900.1;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;gene_id=HG00642_ch_G0000077;gene_biotype=snRNA;gene_name=RNU6-303P;gene_sources=liftoff;ID=HG00642_ch_G0000077;Name=RNU6-303P
HG00642_chrY	CAT	transcript	3855915	3856020	1000	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG00642_ch_T0000355;gene_id=HG00642_ch_G0000077;Parent=HG00642_ch_G0000077;transcript_name=HG00642_ch_T0000355;gene_name=RNU6-303P;ID=HG00642_ch_T0000355;Name=RNU6-303P
HG00642_chrY	CAT	exon	3855915	3856020	.	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG00642_ch_T0000355;gene_id=HG00642_ch_G0000077;Parent=HG00642_ch_T0000355;transcript_name=HG00642_ch_T0000355;gene_name=RNU6-303P;ID=exon:HG00642_ch_T0000355:0;Name=RNU6-303P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	4482630	4483793	.	-	.	source_gene_common_name=SERBP1P2;source_gene=ENSG00000225878.1;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;gene_id=HG00642_ch_G0000078;gene_biotype=processed_pseudogene;gene_name=SERBP1P2;gene_sources=liftoff;ID=HG00642_ch_G0000078;Name=SERBP1P2
HG00642_chrY	CAT	transcript	4482630	4483793	1000	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG00642_ch_T0000356;gene_id=HG00642_ch_G0000078;Parent=HG00642_ch_G0000078;transcript_name=HG00642_ch_T0000356;gene_name=SERBP1P2;ID=HG00642_ch_T0000356;Name=SERBP1P2
HG00642_chrY	CAT	exon	4482630	4483793	.	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG00642_ch_T0000356;gene_id=HG00642_ch_G0000078;Parent=HG00642_ch_T0000356;transcript_name=HG00642_ch_T0000356;gene_name=SERBP1P2;ID=exon:HG00642_ch_T0000356:0;Name=SERBP1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	4674325	4681171	.	-	.	source_gene_common_name=ENSG00000277930;source_gene=ENSG00000277930.2;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;gene_id=HG00642_ch_G0000079;gene_biotype=lncRNA;gene_name=ENSG00000277930;gene_sources=liftoff;ID=HG00642_ch_G0000079;Name=ENSG00000277930
HG00642_chrY	CAT	transcript	4674325	4680603	1000	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_G0000079;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=HG00642_ch_T0000357;Name=ENSG00000277930
HG00642_chrY	CAT	exon	4674325	4675179	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000357;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000357:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4675180	4678457	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000357;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=intron:HG00642_ch_T0000357:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4678458	4678631	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000357;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000357:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4678632	4680339	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000357;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=intron:HG00642_ch_T0000357:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4680340	4680603	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00642_ch_T0000357;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000357;transcript_name=HG00642_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000357:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4674325	4681171	1000	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_G0000079;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=HG00642_ch_T0000358;Name=ENSG00000277930
HG00642_chrY	CAT	exon	4674325	4675179	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000358;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000358:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4675180	4678457	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000358;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=intron:HG00642_ch_T0000358:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4678458	4678631	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000358;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000358:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4678632	4680974	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000358;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=intron:HG00642_ch_T0000358:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4680975	4681171	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00642_ch_T0000358;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000358;transcript_name=HG00642_ch_T0000358;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000358:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4674811	4678670	1000	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00642_ch_T0000359;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_G0000079;transcript_name=HG00642_ch_T0000359;gene_name=ENSG00000277930;ID=HG00642_ch_T0000359;Name=ENSG00000277930
HG00642_chrY	CAT	exon	4674811	4675179	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00642_ch_T0000359;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000359;transcript_name=HG00642_ch_T0000359;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000359:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4675180	4678457	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00642_ch_T0000359;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000359;transcript_name=HG00642_ch_T0000359;gene_name=ENSG00000277930;ID=intron:HG00642_ch_T0000359:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4678458	4678670	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00642_ch_T0000359;gene_id=HG00642_ch_G0000079;Parent=HG00642_ch_T0000359;transcript_name=HG00642_ch_T0000359;gene_name=ENSG00000277930;ID=exon:HG00642_ch_T0000359:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	4681179	5423666	.	+	.	source_gene_common_name=PCDH11Y;source_gene=ENSG00000099715.15;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;gene_id=HG00642_ch_G0000080;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff;ID=HG00642_ch_G0000080;Name=PCDH11Y
HG00642_chrY	CAT	transcript	4681179	4786409	100	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=HG00642_ch_T0000360;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681179	4681558	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4712870	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4712871	4712976	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712977	4713634	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4713635	4713693	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4713662	4713693	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4713662	4713664	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000360;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4713694	4737853	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4737854	4738424	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737854	4738424	.	+	1	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781672	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781672	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4781673	4785308	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000360:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4785309	4786409	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000360:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4785309	4785326	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	4785324	4785326	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00642_ch_T0000360;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000360;transcript_name=HG00642_ch_T0000360;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000360;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4681249	4786424	100	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=HG00642_ch_T0000361;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681249	4681558	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4711863	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4711864	4712032	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712033	4712870	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4712871	4712976	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712977	4713634	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4713635	4713693	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4713662	4713693	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4713662	4713664	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000361;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4713694	4737853	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4737854	4738424	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737854	4738424	.	+	1	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781672	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781672	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4781673	4785308	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000361:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4785309	4786424	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000361:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4785309	4785326	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	4785324	4785326	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00642_ch_T0000361;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000361;transcript_name=HG00642_ch_T0000361;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000361;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4681249	5423666	100	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=HG00642_ch_T0000362;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681249	4681558	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4737853	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4737854	4738424	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4738065	4738424	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4738065	4738067	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000362;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781672	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781672	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4781673	5182047	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5182048	5182246	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5182048	5182246	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5182247	5263220	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000362:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5263221	5263244	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5263221	5263244	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000362:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5263245	5418713	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000362:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5418714	5423666	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000362:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5418714	5419384	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000362:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	5419382	5419384	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00642_ch_T0000362;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000362;transcript_name=HG00642_ch_T0000362;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000362;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4681249	4781230	100	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=HG00642_ch_T0000363;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681249	4681558	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4711863	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4711864	4712032	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712033	4712179	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4712180	4712311	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712312	4712870	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4712871	4712976	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4712977	4713634	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4713635	4713693	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4713662	4713693	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000363:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4713662	4713664	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000363;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4713694	4737853	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4737854	4738424	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737854	4738424	.	+	1	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000363:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000363:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781230	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000363:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781230	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00642_ch_T0000363;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000363;transcript_name=HG00642_ch_T0000363;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000363:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4681343	4712912	1000	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=HG00642_ch_T0000364;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681343	4681558	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000364;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000364:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4683640	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000364;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000364:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4683641	4683711	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000364;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000364:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4683712	4712870	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000364;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000364:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4712871	4712912	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00642_ch_T0000364;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000364;transcript_name=HG00642_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000364:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4681353	4738053	100	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=HG00642_ch_T0000365;Name=PCDH11Y
HG00642_chrY	CAT	exon	4681353	4681558	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000365:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4681559	4683640	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000365:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4683641	4683711	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000365:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4683712	4713634	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000365:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4713635	4713693	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000365:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4713662	4713693	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000365:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4713662	4713664	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000365;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4713694	4737853	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000365:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4737854	4738053	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000365:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737854	4738053	.	+	1	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00642_ch_T0000365;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000365;transcript_name=HG00642_ch_T0000365;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000365:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4737053	4782402	100	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=HG00642_ch_T0000367;Name=PCDH11Y
HG00642_chrY	CAT	exon	4737053	4738424	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737789	4738424	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4737789	4737791	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000367;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4782402	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000367:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781705	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000367:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	4781703	4781705	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00642_ch_T0000367;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000367;transcript_name=HG00642_ch_T0000367;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000367;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4737055	4785665	100	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=HG00642_ch_T0000368;Name=PCDH11Y
HG00642_chrY	CAT	exon	4737055	4738424	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737789	4738424	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4737789	4737791	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781672	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781672	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4781673	4785308	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4785309	4785665	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4785309	4785326	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	4785324	4785326	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00642_ch_T0000368;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000368;transcript_name=HG00642_ch_T0000368;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	4737055	5423666	100	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_G0000080;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=HG00642_ch_T0000369;Name=PCDH11Y
HG00642_chrY	CAT	exon	4737055	4738424	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4737789	4738424	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	4737789	4737791	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=start_codon:HG00642_ch_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4738425	4779179	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	4779180	4781672	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	4779180	4781672	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	4781673	5182047	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5182048	5182246	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5182048	5182246	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5182247	5263220	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5263221	5263244	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5263221	5263244	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5263245	5418713	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=intron:HG00642_ch_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5418714	5423666	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=exon:HG00642_ch_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5418714	5419384	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=CDS:HG00642_ch_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	5419382	5419384	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00642_ch_T0000369;gene_id=HG00642_ch_G0000080;Parent=HG00642_ch_T0000369;transcript_name=HG00642_ch_T0000369;gene_name=PCDH11Y;ID=stop_codon:HG00642_ch_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	4700029	4700219	.	+	.	source_gene_common_name=RNU2-57P;source_gene=ENSG00000252468.1;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;gene_id=HG00642_ch_G0000081;gene_biotype=snRNA;gene_name=RNU2-57P;gene_sources=liftoff;ID=HG00642_ch_G0000081;Name=RNU2-57P
HG00642_chrY	CAT	transcript	4700029	4700219	1000	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG00642_ch_T0000366;gene_id=HG00642_ch_G0000081;Parent=HG00642_ch_G0000081;transcript_name=HG00642_ch_T0000366;gene_name=RNU2-57P;ID=HG00642_ch_T0000366;Name=RNU2-57P
HG00642_chrY	CAT	exon	4700029	4700219	.	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG00642_ch_T0000366;gene_id=HG00642_ch_G0000081;Parent=HG00642_ch_T0000366;transcript_name=HG00642_ch_T0000366;gene_name=RNU2-57P;ID=exon:HG00642_ch_T0000366:0;Name=RNU2-57P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	4888190	4889044	.	-	.	source_gene_common_name=VDAC1P6;source_gene=ENSG00000231341.1;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;gene_id=HG00642_ch_G0000082;gene_biotype=processed_pseudogene;gene_name=VDAC1P6;gene_sources=liftoff;ID=HG00642_ch_G0000082;Name=VDAC1P6
HG00642_chrY	CAT	transcript	4888190	4889044	1000	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG00642_ch_T0000370;gene_id=HG00642_ch_G0000082;Parent=HG00642_ch_G0000082;transcript_name=HG00642_ch_T0000370;gene_name=VDAC1P6;ID=HG00642_ch_T0000370;Name=VDAC1P6
HG00642_chrY	CAT	exon	4888190	4889044	.	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG00642_ch_T0000370;gene_id=HG00642_ch_G0000082;Parent=HG00642_ch_T0000370;transcript_name=HG00642_ch_T0000370;gene_name=VDAC1P6;ID=exon:HG00642_ch_T0000370:0;Name=VDAC1P6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5018728	5019947	.	-	.	source_gene_common_name=EIF4A1P2;source_gene=ENSG00000235001.3;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;gene_id=HG00642_ch_G0000083;gene_biotype=processed_pseudogene;gene_name=EIF4A1P2;gene_sources=liftoff;ID=HG00642_ch_G0000083;Name=EIF4A1P2
HG00642_chrY	CAT	transcript	5018728	5019947	1000	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG00642_ch_T0000371;gene_id=HG00642_ch_G0000083;Parent=HG00642_ch_G0000083;transcript_name=HG00642_ch_T0000371;gene_name=EIF4A1P2;ID=HG00642_ch_T0000371;Name=EIF4A1P2
HG00642_chrY	CAT	exon	5018728	5019947	.	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG00642_ch_T0000371;gene_id=HG00642_ch_G0000083;Parent=HG00642_ch_T0000371;transcript_name=HG00642_ch_T0000371;gene_name=EIF4A1P2;ID=exon:HG00642_ch_T0000371:0;Name=EIF4A1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5254591	5255877	.	+	.	source_gene_common_name=KRT18P10;source_gene=ENSG00000214207.2;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;gene_id=HG00642_ch_G0000084;gene_biotype=processed_pseudogene;gene_name=KRT18P10;gene_sources=liftoff;ID=HG00642_ch_G0000084;Name=KRT18P10
HG00642_chrY	CAT	transcript	5254591	5255877	1000	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG00642_ch_T0000372;gene_id=HG00642_ch_G0000084;Parent=HG00642_ch_G0000084;transcript_name=HG00642_ch_T0000372;gene_name=KRT18P10;ID=HG00642_ch_T0000372;Name=KRT18P10
HG00642_chrY	CAT	exon	5254591	5255877	.	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG00642_ch_T0000372;gene_id=HG00642_ch_G0000084;Parent=HG00642_ch_T0000372;transcript_name=HG00642_ch_T0000372;gene_name=KRT18P10;ID=exon:HG00642_ch_T0000372:0;Name=KRT18P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5315921	5316096	.	-	.	source_gene_common_name=SNX3P1Y;source_gene=ENSG00000278585.1;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;gene_id=HG00642_ch_G0000085;gene_biotype=processed_pseudogene;gene_name=SNX3P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000085;Name=SNX3P1Y
HG00642_chrY	CAT	transcript	5315921	5316096	1000	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG00642_ch_T0000373;gene_id=HG00642_ch_G0000085;Parent=HG00642_ch_G0000085;transcript_name=HG00642_ch_T0000373;gene_name=SNX3P1Y;ID=HG00642_ch_T0000373;Name=SNX3P1Y
HG00642_chrY	CAT	exon	5315921	5316096	.	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG00642_ch_T0000373;gene_id=HG00642_ch_G0000085;Parent=HG00642_ch_T0000373;transcript_name=HG00642_ch_T0000373;gene_name=SNX3P1Y;ID=exon:HG00642_ch_T0000373:0;Name=SNX3P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5474740	5475177	.	-	.	source_gene_common_name=RPL26P37;source_gene=ENSG00000235175.1;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;gene_id=HG00642_ch_G0000086;gene_biotype=processed_pseudogene;gene_name=RPL26P37;gene_sources=liftoff;ID=HG00642_ch_G0000086;Name=RPL26P37
HG00642_chrY	CAT	transcript	5474740	5475177	1000	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG00642_ch_T0000374;gene_id=HG00642_ch_G0000086;Parent=HG00642_ch_G0000086;transcript_name=HG00642_ch_T0000374;gene_name=RPL26P37;ID=HG00642_ch_T0000374;Name=RPL26P37
HG00642_chrY	CAT	exon	5474740	5475177	.	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG00642_ch_T0000374;gene_id=HG00642_ch_G0000086;Parent=HG00642_ch_T0000374;transcript_name=HG00642_ch_T0000374;gene_name=RPL26P37;ID=exon:HG00642_ch_T0000374:0;Name=RPL26P37;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5568945	5570181	.	+	.	source_gene_common_name=TUSC2P1;source_gene=ENSG00000285470.1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;gene_id=HG00642_ch_G0000087;gene_biotype=processed_pseudogene;gene_name=TUSC2P1;gene_sources=liftoff;ID=HG00642_ch_G0000087;Name=TUSC2P1
HG00642_chrY	CAT	transcript	5568945	5570181	1000	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.91899999999998;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG00642_ch_T0000375;gene_id=HG00642_ch_G0000087;Parent=HG00642_ch_G0000087;transcript_name=HG00642_ch_T0000375;gene_name=TUSC2P1;ID=HG00642_ch_T0000375;Name=TUSC2P1
HG00642_chrY	CAT	exon	5568945	5570181	.	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.91899999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG00642_ch_T0000375;gene_id=HG00642_ch_G0000087;Parent=HG00642_ch_T0000375;transcript_name=HG00642_ch_T0000375;gene_name=TUSC2P1;ID=exon:HG00642_ch_T0000375:0;Name=TUSC2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5840239	5840702	.	+	.	source_gene_common_name=DLGAP5P1;source_gene=ENSG00000237195.1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;gene_id=HG00642_ch_G0000088;gene_biotype=processed_pseudogene;gene_name=DLGAP5P1;gene_sources=liftoff;ID=HG00642_ch_G0000088;Name=DLGAP5P1
HG00642_chrY	CAT	transcript	5840239	5840702	1000	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG00642_ch_T0000376;gene_id=HG00642_ch_G0000088;Parent=HG00642_ch_G0000088;transcript_name=HG00642_ch_T0000376;gene_name=DLGAP5P1;ID=HG00642_ch_T0000376;Name=DLGAP5P1
HG00642_chrY	CAT	exon	5840239	5840702	.	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG00642_ch_T0000376;gene_id=HG00642_ch_G0000088;Parent=HG00642_ch_T0000376;transcript_name=HG00642_ch_T0000376;gene_name=DLGAP5P1;ID=exon:HG00642_ch_T0000376:0;Name=DLGAP5P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5922701	5927528	.	-	.	source_gene_common_name=ENSG00000290369;source_gene=ENSG00000290369.2;gene_id=HG00642_ch_G0000089;gene_biotype=lncRNA;gene_name=ENSG00000290369;gene_sources=liftoff;ID=HG00642_ch_G0000089;Name=ENSG00000290369
HG00642_chrY	CAT	transcript	5922701	5927517	1000	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_G0000089;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=HG00642_ch_T0000377;Name=ENSG00000290369
HG00642_chrY	CAT	exon	5922701	5923298	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5923299	5923850	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000377:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5923851	5923958	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5923959	5924731	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000377:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924732	5924877	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924878	5924990	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000377:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924991	5925080	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925081	5925275	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000377:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5925276	5925398	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925399	5927342	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000377:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5927343	5927517	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000377;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000377;transcript_name=HG00642_ch_T0000377;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000377:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5922880	5927506	1000	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_G0000089;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=HG00642_ch_T0000378;Name=ENSG00000290369
HG00642_chrY	CAT	exon	5922880	5923298	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5923299	5923850	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5923851	5923958	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5923959	5924138	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924139	5924191	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924192	5924731	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924732	5924877	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924878	5924990	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924991	5925076	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925077	5925275	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5925276	5925398	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925399	5927342	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000378:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5927343	5927506	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000378;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000378;transcript_name=HG00642_ch_T0000378;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000378:6;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5922880	5927528	1000	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_G0000089;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=HG00642_ch_T0000379;Name=ENSG00000290369
HG00642_chrY	CAT	exon	5922880	5924191	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000379:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924192	5924731	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000379:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924732	5924877	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000379:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924878	5924990	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000379:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924991	5925080	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000379:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925081	5925275	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000379:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5925276	5925398	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000379:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925399	5927342	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=intron:HG00642_ch_T0000379:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5927343	5927528	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00642_ch_T0000379;gene_id=HG00642_ch_G0000089;Parent=HG00642_ch_T0000379;transcript_name=HG00642_ch_T0000379;gene_name=ENSG00000290369;ID=exon:HG00642_ch_T0000379:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5924732	5926720	.	-	.	source_gene_common_name=TTTY23B;source_gene=ENSG00000250204.3;gene_id=HG00642_ch_G0000090;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY23B;gene_sources=liftoff;ID=HG00642_ch_G0000090;Name=TTTY23B
HG00642_chrY	CAT	transcript	5924732	5926720	1000	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_G0000090;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=HG00642_ch_T0000380;Name=TTTY23B
HG00642_chrY	CAT	exon	5924732	5924877	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_T0000380;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=exon:HG00642_ch_T0000380:0;Name=TTTY23B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5924878	5924989	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_T0000380;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=intron:HG00642_ch_T0000380:0;Name=TTTY23B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5924990	5925080	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_T0000380;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=exon:HG00642_ch_T0000380:1;Name=TTTY23B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5925081	5926408	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_T0000380;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=intron:HG00642_ch_T0000380:1;Name=TTTY23B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5926409	5926720	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00642_ch_T0000380;gene_id=HG00642_ch_G0000090;Parent=HG00642_ch_T0000380;transcript_name=HG00642_ch_T0000380;gene_name=TTTY23B;ID=exon:HG00642_ch_T0000380:2;Name=TTTY23B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5927660	5930455	.	+	.	source_gene_common_name=TSPY2;source_gene=ENSG00000168757.13;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;gene_id=HG00642_ch_G0000091;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=HG00642_ch_G0000091;Name=TSPY2
HG00642_chrY	CAT	transcript	5927660	5930455	100	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_G0000091;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=HG00642_ch_T0000381;Name=TSPY2
HG00642_chrY	CAT	exon	5927660	5928191	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5927706	5928191	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	5927706	5927708	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=start_codon:HG00642_ch_T0000381;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928192	5928792	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=intron:HG00642_ch_T0000381:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928793	5928870	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928793	5928870	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928871	5928998	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=intron:HG00642_ch_T0000381:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928999	5929110	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928999	5929110	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929111	5929211	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=intron:HG00642_ch_T0000381:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929212	5929357	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929212	5929357	.	+	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929358	5929463	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=intron:HG00642_ch_T0000381:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929464	5929545	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929464	5929545	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929546	5930239	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=intron:HG00642_ch_T0000381:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5930240	5930455	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=exon:HG00642_ch_T0000381:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5930240	5930262	.	+	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000381:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	5930260	5930262	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=HG00642_ch_T0000381;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000381;transcript_name=HG00642_ch_T0000381;gene_name=TSPY2;ID=stop_codon:HG00642_ch_T0000381;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5927660	5930329	100	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_G0000091;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=HG00642_ch_T0000382;Name=TSPY2
HG00642_chrY	CAT	exon	5927660	5927792	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5927706	5927792	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	5927706	5927708	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=start_codon:HG00642_ch_T0000382;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5927793	5928053	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928054	5928191	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928054	5928191	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928192	5928792	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928793	5928870	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928793	5928870	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928871	5928998	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928999	5929110	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928999	5929110	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929111	5929211	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929212	5929357	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929212	5929357	.	+	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929358	5929463	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929464	5929545	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929464	5929545	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929546	5930239	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=intron:HG00642_ch_T0000382:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5930240	5930329	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=exon:HG00642_ch_T0000382:6;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5930240	5930262	.	+	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000382:6;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	5930260	5930262	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=HG00642_ch_T0000382;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000382;transcript_name=HG00642_ch_T0000382;gene_name=TSPY2;ID=stop_codon:HG00642_ch_T0000382;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5927706	5930449	100	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_G0000091;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=HG00642_ch_T0000383;Name=TSPY2
HG00642_chrY	CAT	exon	5927706	5928191	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5927706	5928191	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000383:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	5927706	5927708	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=start_codon:HG00642_ch_T0000383;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928192	5928792	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=intron:HG00642_ch_T0000383:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928793	5928870	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928793	5928870	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000383:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928871	5928998	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=intron:HG00642_ch_T0000383:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928999	5929110	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5928999	5929110	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000383:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929111	5929211	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=intron:HG00642_ch_T0000383:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929212	5929357	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929212	5929357	.	+	2	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000383:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929358	5929452	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=intron:HG00642_ch_T0000383:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929453	5929545	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	5929453	5929515	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=CDS:HG00642_ch_T0000383:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	5929513	5929515	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=stop_codon:HG00642_ch_T0000383;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929546	5930239	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=intron:HG00642_ch_T0000383:4;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5930240	5930449	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=HG00642_ch_T0000383;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000383;transcript_name=HG00642_ch_T0000383;gene_name=TSPY2;ID=exon:HG00642_ch_T0000383:5;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5927706	5930456	1000	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_G0000091;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=HG00642_ch_T0000384;Name=TSPY2
HG00642_chrY	CAT	exon	5927706	5928191	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=exon:HG00642_ch_T0000384:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928192	5928792	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=intron:HG00642_ch_T0000384:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928793	5928870	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=exon:HG00642_ch_T0000384:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5928871	5928998	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=intron:HG00642_ch_T0000384:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5928999	5929545	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=exon:HG00642_ch_T0000384:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929546	5929672	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=intron:HG00642_ch_T0000384:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929673	5930456	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=HG00642_ch_T0000384;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000384;transcript_name=HG00642_ch_T0000384;gene_name=TSPY2;ID=exon:HG00642_ch_T0000384:3;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5929060	5930441	1000	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_G0000091;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=HG00642_ch_T0000385;Name=TSPY2
HG00642_chrY	CAT	exon	5929060	5929357	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000385;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=exon:HG00642_ch_T0000385:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929358	5929463	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000385;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=intron:HG00642_ch_T0000385:0;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5929464	5929545	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000385;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=exon:HG00642_ch_T0000385:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5929546	5930239	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000385;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=intron:HG00642_ch_T0000385:1;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5930240	5930441	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=HG00642_ch_T0000385;gene_id=HG00642_ch_G0000091;Parent=HG00642_ch_T0000385;transcript_name=HG00642_ch_T0000385;gene_name=TSPY2;ID=exon:HG00642_ch_T0000385:2;Name=TSPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5937704	5945391	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=HG00642_ch_G0000092;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000092;Name=FAM197Y9
HG00642_chrY	CAT	transcript	5937704	5945391	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_G0000092;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=HG00642_ch_T0000386;Name=FAM197Y9
HG00642_chrY	CAT	exon	5937704	5939829	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000386;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000386:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5939830	5943380	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000386;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000386:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5943381	5943466	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000386;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000386:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5943467	5945271	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000386;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000386:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5945272	5945391	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000386;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000386;transcript_name=HG00642_ch_T0000386;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000386:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5939770	5945373	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_G0000092;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=HG00642_ch_T0000387;Name=FAM197Y9
HG00642_chrY	CAT	exon	5939770	5939829	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000387:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5939830	5943380	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000387:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5943381	5943539	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000387:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5943540	5945039	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000387:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5945040	5945185	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000387:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5945186	5945271	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000387:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5945272	5945373	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000387;gene_id=HG00642_ch_G0000092;Parent=HG00642_ch_T0000387;transcript_name=HG00642_ch_T0000387;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000387:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5945040	5947033	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=HG00642_ch_G0000093;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000093;Name=FAM197Y9
HG00642_chrY	CAT	transcript	5945040	5947033	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_G0000093;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=HG00642_ch_T0000388;Name=FAM197Y9
HG00642_chrY	CAT	exon	5945040	5945185	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_T0000388;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000388:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5945186	5945297	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_T0000388;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000388:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5945298	5945381	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_T0000388;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000388:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5945382	5946723	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_T0000388;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000388:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5946724	5947033	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000388;gene_id=HG00642_ch_G0000093;Parent=HG00642_ch_T0000388;transcript_name=HG00642_ch_T0000388;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000388:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5948032	5950714	.	+	.	source_gene_common_name=TSPY11P;source_gene=ENSG00000238235.1;gene_id=HG00642_ch_G0000094;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY11P;gene_sources=liftoff;ID=HG00642_ch_G0000094;Name=TSPY11P
HG00642_chrY	CAT	transcript	5948032	5950714	1000	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_G0000094;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=HG00642_ch_T0000389;Name=TSPY11P
HG00642_chrY	CAT	exon	5948032	5948508	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:0;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5948509	5949114	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=intron:HG00642_ch_T0000389:0;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949115	5949192	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:1;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949193	5949320	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=intron:HG00642_ch_T0000389:1;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949321	5949431	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:2;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949432	5949530	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=intron:HG00642_ch_T0000389:2;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949531	5949673	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:3;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949674	5949780	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=intron:HG00642_ch_T0000389:3;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949781	5949869	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:4;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949870	5950567	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=intron:HG00642_ch_T0000389:4;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5950568	5950714	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00642_ch_T0000389;gene_id=HG00642_ch_G0000094;Parent=HG00642_ch_T0000389;transcript_name=HG00642_ch_T0000389;gene_name=TSPY11P;ID=exon:HG00642_ch_T0000389:5;Name=TSPY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5948041	5956652	.	+	.	source_gene_common_name=ENSG00000296934;source_gene=ENSG00000296934.1;gene_id=HG00642_ch_G0000095;gene_biotype=lncRNA;gene_name=ENSG00000296934;gene_sources=liftoff;ID=HG00642_ch_G0000095;Name=ENSG00000296934
HG00642_chrY	CAT	transcript	5948041	5952373	1000	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_G0000095;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=HG00642_ch_T0000390;Name=ENSG00000296934
HG00642_chrY	CAT	exon	5948041	5949192	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949193	5949320	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000390:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949321	5949431	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949432	5949530	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000390:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949531	5949673	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949674	5949780	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000390:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949781	5949903	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949904	5950556	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000390:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5950557	5950570	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5950571	5951991	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000390:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5951992	5952373	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000390;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000390;transcript_name=HG00642_ch_T0000390;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000390:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5948052	5952541	1000	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_G0000095;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=HG00642_ch_T0000391;Name=ENSG00000296934
HG00642_chrY	CAT	exon	5948052	5948118	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5948119	5948541	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5948542	5948616	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5948617	5949071	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949072	5949192	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949193	5949320	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949321	5949431	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949432	5949780	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949781	5949903	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949904	5950556	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5950557	5950570	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5950571	5951972	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000391:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5951973	5952541	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000391;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000391;transcript_name=HG00642_ch_T0000391;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000391:6;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5948052	5951117	1000	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_G0000095;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=HG00642_ch_T0000392;Name=ENSG00000296934
HG00642_chrY	CAT	exon	5948052	5949192	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000392:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949193	5949320	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000392:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949321	5949431	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000392:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949432	5949530	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000392:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949531	5949673	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000392:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949674	5949780	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000392:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949781	5949903	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000392:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949904	5950556	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000392:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5950557	5951117	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000392;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000392;transcript_name=HG00642_ch_T0000392;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000392:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	5948064	5956652	1000	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_G0000095;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=HG00642_ch_T0000393;Name=ENSG00000296934
HG00642_chrY	CAT	exon	5948064	5948508	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000393:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5948509	5949114	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000393:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949115	5949192	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000393:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949193	5949320	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000393:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5949321	5949431	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000393:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5949432	5956038	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=intron:HG00642_ch_T0000393:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5956039	5956652	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG00642_ch_T0000393;gene_id=HG00642_ch_G0000095;Parent=HG00642_ch_T0000393;transcript_name=HG00642_ch_T0000393;gene_name=ENSG00000296934;ID=exon:HG00642_ch_T0000393:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5955018	5955504	.	-	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;gene_id=HG00642_ch_G0000096;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG00642_ch_G0000096;Name=ENSG00000275352
HG00642_chrY	CAT	transcript	5955018	5955504	1000	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_G0000096;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=HG00642_ch_T0000394;Name=ENSG00000275352
HG00642_chrY	CAT	exon	5955018	5955100	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_T0000394;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000394:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5955101	5955206	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_T0000394;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=intron:HG00642_ch_T0000394:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5955207	5955351	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_T0000394;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000394:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5955352	5955440	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_T0000394;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=intron:HG00642_ch_T0000394:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5955441	5955504	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00642_ch_T0000394;gene_id=HG00642_ch_G0000096;Parent=HG00642_ch_T0000394;transcript_name=HG00642_ch_T0000394;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000394:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5985396	5986513	.	-	.	source_gene_common_name=TSPY19P;source_gene=ENSG00000234583.1;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;gene_id=HG00642_ch_G0000097;gene_biotype=unprocessed_pseudogene;gene_name=TSPY19P;gene_sources=liftoff;ID=HG00642_ch_G0000097;Name=TSPY19P
HG00642_chrY	CAT	transcript	5985396	5986513	1000	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG00642_ch_T0000395;gene_id=HG00642_ch_G0000097;Parent=HG00642_ch_G0000097;transcript_name=HG00642_ch_T0000395;gene_name=TSPY19P;ID=HG00642_ch_T0000395;Name=TSPY19P
HG00642_chrY	CAT	exon	5985396	5985428	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG00642_ch_T0000395;gene_id=HG00642_ch_G0000097;Parent=HG00642_ch_T0000395;transcript_name=HG00642_ch_T0000395;gene_name=TSPY19P;ID=exon:HG00642_ch_T0000395:0;Name=TSPY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5985429	5986037	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG00642_ch_T0000395;gene_id=HG00642_ch_G0000097;Parent=HG00642_ch_T0000395;transcript_name=HG00642_ch_T0000395;gene_name=TSPY19P;ID=intron:HG00642_ch_T0000395:0;Name=TSPY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5986038	5986513	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG00642_ch_T0000395;gene_id=HG00642_ch_G0000097;Parent=HG00642_ch_T0000395;transcript_name=HG00642_ch_T0000395;gene_name=TSPY19P;ID=exon:HG00642_ch_T0000395:1;Name=TSPY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5987481	5989641	.	+	.	source_gene_common_name=ENSG00000235094;source_gene=ENSG00000235094.3;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;gene_id=HG00642_ch_G0000098;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235094;gene_sources=liftoff;ID=HG00642_ch_G0000098;Name=ENSG00000235094
HG00642_chrY	CAT	transcript	5987481	5989641	1000	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_G0000098;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=HG00642_ch_T0000396;Name=ENSG00000235094
HG00642_chrY	CAT	exon	5987481	5987810	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=exon:HG00642_ch_T0000396:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5987811	5988861	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=intron:HG00642_ch_T0000396:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5988862	5988939	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=exon:HG00642_ch_T0000396:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5988940	5989134	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=intron:HG00642_ch_T0000396:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5989135	5989250	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=exon:HG00642_ch_T0000396:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5989251	5989336	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=intron:HG00642_ch_T0000396:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5989337	5989359	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=exon:HG00642_ch_T0000396:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5989360	5989595	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=intron:HG00642_ch_T0000396:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	5989596	5989641	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=HG00642_ch_T0000396;gene_id=HG00642_ch_G0000098;Parent=HG00642_ch_T0000396;transcript_name=HG00642_ch_T0000396;gene_name=ENSG00000235094;ID=exon:HG00642_ch_T0000396:4;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	5997640	6024072	.	+	.	source_gene_common_name=ENSG00000295986;source_gene=ENSG00000295986.1;gene_id=HG00642_ch_G0000099;gene_biotype=lncRNA;gene_name=ENSG00000295986;gene_sources=liftoff;ID=HG00642_ch_G0000099;Name=ENSG00000295986
HG00642_chrY	CAT	transcript	5997640	6024072	1000	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_G0000099;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=HG00642_ch_T0000397;Name=ENSG00000295986
HG00642_chrY	CAT	exon	5997640	5998123	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_T0000397;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=exon:HG00642_ch_T0000397:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	5998124	6020250	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_T0000397;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=intron:HG00642_ch_T0000397:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6020251	6020366	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_T0000397;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=exon:HG00642_ch_T0000397:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6020367	6024002	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_T0000397;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=intron:HG00642_ch_T0000397:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6024003	6024072	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00642_ch_T0000397;gene_id=HG00642_ch_G0000099;Parent=HG00642_ch_T0000397;transcript_name=HG00642_ch_T0000397;gene_name=ENSG00000295986;ID=exon:HG00642_ch_T0000397:2;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6009495	6024795	.	+	.	source_gene_common_name=RBMY2GP;source_gene=ENSG00000223744.1;gene_id=HG00642_ch_G0000100;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2GP;gene_sources=liftoff;ID=HG00642_ch_G0000100;Name=RBMY2GP
HG00642_chrY	CAT	transcript	6009495	6024795	1000	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_G0000100;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=HG00642_ch_T0000398;Name=RBMY2GP
HG00642_chrY	CAT	exon	6009495	6009672	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6009673	6020216	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6020217	6020366	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6020367	6022366	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6022367	6022466	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6022467	6023273	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6023274	6023384	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6023385	6023781	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6023782	6023892	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6023893	6024002	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6024003	6024084	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6024085	6024493	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=intron:HG00642_ch_T0000398:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6024494	6024795	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00642_ch_T0000398;gene_id=HG00642_ch_G0000100;Parent=HG00642_ch_T0000398;transcript_name=HG00642_ch_T0000398;gene_name=RBMY2GP;ID=exon:HG00642_ch_T0000398:6;Name=RBMY2GP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6038692	6051407	.	-	.	source_gene_common_name=LINC00280;source_gene=ENSG00000229643.2;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;gene_id=HG00642_ch_G0000101;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG00642_ch_G0000101;Name=LINC00280
HG00642_chrY	CAT	transcript	6038692	6042898	1000	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_G0000101;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=HG00642_ch_T0000399;Name=LINC00280
HG00642_chrY	CAT	exon	6038692	6038910	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000399;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=exon:HG00642_ch_T0000399:0;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6038911	6040168	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000399;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=intron:HG00642_ch_T0000399:0;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6040169	6040311	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000399;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=exon:HG00642_ch_T0000399:1;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6040312	6042812	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000399;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=intron:HG00642_ch_T0000399:1;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6042813	6042898	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00642_ch_T0000399;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000399;transcript_name=HG00642_ch_T0000399;gene_name=LINC00280;ID=exon:HG00642_ch_T0000399:2;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6042047	6051407	1000	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_G0000101;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=HG00642_ch_T0000400;Name=LINC00280
HG00642_chrY	CAT	exon	6042047	6043906	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=exon:HG00642_ch_T0000400:0;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6043907	6047995	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=intron:HG00642_ch_T0000400:0;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6047996	6048248	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=exon:HG00642_ch_T0000400:1;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6048249	6050789	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=intron:HG00642_ch_T0000400:1;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6050790	6050862	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=exon:HG00642_ch_T0000400:2;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6050863	6051238	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=intron:HG00642_ch_T0000400:2;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6051239	6051407	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00642_ch_T0000400;gene_id=HG00642_ch_G0000101;Parent=HG00642_ch_T0000400;transcript_name=HG00642_ch_T0000400;gene_name=LINC00280;ID=exon:HG00642_ch_T0000400:3;Name=LINC00280;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6056131	6062620	.	-	.	source_gene_common_name=ENSG00000303345;source_gene=ENSG00000303345.1;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;gene_id=HG00642_ch_G0000102;gene_biotype=lncRNA;gene_name=ENSG00000303345;gene_sources=liftoff;ID=HG00642_ch_G0000102;Name=ENSG00000303345
HG00642_chrY	CAT	transcript	6056131	6062620	1000	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_G0000102;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=HG00642_ch_T0000401;Name=ENSG00000303345
HG00642_chrY	CAT	exon	6056131	6056514	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=exon:HG00642_ch_T0000401:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6056515	6058755	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=intron:HG00642_ch_T0000401:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6058756	6058911	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=exon:HG00642_ch_T0000401:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6058912	6062274	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=intron:HG00642_ch_T0000401:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6062275	6062361	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=exon:HG00642_ch_T0000401:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6062362	6062564	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=intron:HG00642_ch_T0000401:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6062565	6062620	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00642_ch_T0000401;gene_id=HG00642_ch_G0000102;Parent=HG00642_ch_T0000401;transcript_name=HG00642_ch_T0000401;gene_name=ENSG00000303345;ID=exon:HG00642_ch_T0000401:3;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6071876	6093050	.	+	.	source_gene_common_name=TTTY1B;source_gene=ENSG00000129816.6;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;gene_id=HG00642_ch_G0000103;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG00642_ch_G0000103;Name=TTTY1B
HG00642_chrY	CAT	transcript	6071876	6087050	1000	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_G0000103;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=HG00642_ch_T0000402;Name=TTTY1B
HG00642_chrY	CAT	exon	6071876	6072161	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000402:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6072162	6075585	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000402:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6075586	6075745	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000402:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6075746	6082608	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000402:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6082609	6082767	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000402:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6082768	6086892	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000402:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6086893	6087050	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=HG00642_ch_T0000402;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000402;transcript_name=HG00642_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000402:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6071904	6093050	1000	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_G0000103;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=HG00642_ch_T0000403;Name=TTTY1B
HG00642_chrY	CAT	exon	6071904	6072161	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6072162	6082608	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000403:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6082609	6082767	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6082768	6084338	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000403:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6084339	6084425	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6084426	6085073	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000403:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6085074	6085211	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6085212	6090318	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000403:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6090319	6090462	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090463	6092792	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000403:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092793	6093050	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=HG00642_ch_T0000403;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000403;transcript_name=HG00642_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000403:5;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6071904	6087057	1000	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_G0000103;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=HG00642_ch_T0000404;Name=TTTY1B
HG00642_chrY	CAT	exon	6071904	6072161	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000404;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000404:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6072162	6082608	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000404;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000404:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6082609	6082767	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000404;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000404:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6082768	6086892	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000404;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000404:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6086893	6087057	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=HG00642_ch_T0000404;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000404;transcript_name=HG00642_ch_T0000404;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000404:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6071917	6093050	1000	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_G0000103;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=HG00642_ch_T0000405;Name=TTTY1B
HG00642_chrY	CAT	exon	6071917	6072161	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000405:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6072162	6075585	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000405:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6075586	6075745	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000405:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6075746	6082608	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000405:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6082609	6082717	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000405:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6082718	6085073	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000405:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6085074	6085211	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000405:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6085212	6092792	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000405:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092793	6093050	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG00642_ch_T0000405;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000405;transcript_name=HG00642_ch_T0000405;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000405:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6071922	6078195	1000	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=HG00642_ch_T0000406;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_G0000103;transcript_name=HG00642_ch_T0000406;gene_name=TTTY1B;ID=HG00642_ch_T0000406;Name=TTTY1B
HG00642_chrY	CAT	exon	6071922	6072161	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=HG00642_ch_T0000406;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000406;transcript_name=HG00642_ch_T0000406;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000406:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6072162	6077947	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=HG00642_ch_T0000406;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000406;transcript_name=HG00642_ch_T0000406;gene_name=TTTY1B;ID=intron:HG00642_ch_T0000406:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6077948	6078195	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=HG00642_ch_T0000406;gene_id=HG00642_ch_G0000103;Parent=HG00642_ch_T0000406;transcript_name=HG00642_ch_T0000406;gene_name=TTTY1B;ID=exon:HG00642_ch_T0000406:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6087545	6129055	.	-	.	source_gene_common_name=TTTY2;source_gene=ENSG00000212855.6;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;gene_id=HG00642_ch_G0000104;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG00642_ch_G0000104;Name=TTTY2
HG00642_chrY	CAT	transcript	6087545	6127133	1000	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=HG00642_ch_T0000407;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093629	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093630	6093857	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6101251	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101252	6101338	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101339	6101689	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101690	6101794	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101795	6103814	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6110417	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6110418	6110628	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6110629	6110802	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6110803	6110890	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:8;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6110891	6126932	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=intron:HG00642_ch_T0000407:8;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126933	6127133	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG00642_ch_T0000407;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000407;transcript_name=HG00642_ch_T0000407;gene_name=TTTY2;ID=exon:HG00642_ch_T0000407:9;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087545	6109938	1000	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=HG00642_ch_T0000408;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6101251	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101252	6101338	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101339	6101689	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101690	6101794	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101795	6103814	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109726	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=intron:HG00642_ch_T0000408:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109727	6109938	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG00642_ch_T0000408;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000408;transcript_name=HG00642_ch_T0000408;gene_name=TTTY2;ID=exon:HG00642_ch_T0000408:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087545	6109937	1000	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=HG00642_ch_T0000409;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=intron:HG00642_ch_T0000409:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=intron:HG00642_ch_T0000409:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=intron:HG00642_ch_T0000409:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=intron:HG00642_ch_T0000409:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109726	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=intron:HG00642_ch_T0000409:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109727	6109937	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG00642_ch_T0000409;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000409;transcript_name=HG00642_ch_T0000409;gene_name=TTTY2;ID=exon:HG00642_ch_T0000409:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087545	6109937	1000	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=HG00642_ch_T0000410;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6091662	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6091663	6091880	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6091881	6092243	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092244	6092338	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6092339	6092859	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093629	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093630	6093857	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109732	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=intron:HG00642_ch_T0000410:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109733	6109937	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG00642_ch_T0000410;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000410;transcript_name=HG00642_ch_T0000410;gene_name=TTTY2;ID=exon:HG00642_ch_T0000410:8;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087545	6109925	1000	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=HG00642_ch_T0000411;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6092859	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6101251	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101252	6101338	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101339	6103814	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109726	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=intron:HG00642_ch_T0000411:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109727	6109925	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG00642_ch_T0000411;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000411;transcript_name=HG00642_ch_T0000411;gene_name=TTTY2;ID=exon:HG00642_ch_T0000411:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087545	6096106	1000	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=HG00642_ch_T0000412;Name=TTTY2
HG00642_chrY	CAT	exon	6087545	6088409	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6091662	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6091663	6091880	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6091881	6092859	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6094149	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6094150	6094236	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6094237	6095969	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=intron:HG00642_ch_T0000412:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6095970	6096106	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00642_ch_T0000412;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000412;transcript_name=HG00642_ch_T0000412;gene_name=TTTY2;ID=exon:HG00642_ch_T0000412:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087730	6105632	1000	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=HG00642_ch_T0000413;Name=TTTY2
HG00642_chrY	CAT	exon	6087730	6088409	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6092859	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6101251	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101252	6101338	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101339	6103814	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=intron:HG00642_ch_T0000413:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6105632	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00642_ch_T0000413;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000413;transcript_name=HG00642_ch_T0000413;gene_name=TTTY2;ID=exon:HG00642_ch_T0000413:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087730	6127149	1000	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=HG00642_ch_T0000414;Name=TTTY2
HG00642_chrY	CAT	exon	6087730	6088409	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6092859	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6110417	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6110418	6110628	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6110629	6126932	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=intron:HG00642_ch_T0000414:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126933	6127149	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG00642_ch_T0000414;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000414;transcript_name=HG00642_ch_T0000414;gene_name=TTTY2;ID=exon:HG00642_ch_T0000414:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087733	6124702	1000	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=HG00642_ch_T0000415;Name=TTTY2
HG00642_chrY	CAT	exon	6087733	6088409	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6110417	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6110418	6110628	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6110629	6110802	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6110803	6110890	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6110891	6124517	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=intron:HG00642_ch_T0000415:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6124518	6124702	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000415;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000415;transcript_name=HG00642_ch_T0000415;gene_name=TTTY2;ID=exon:HG00642_ch_T0000415:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087734	6109925	1000	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=HG00642_ch_T0000416;Name=TTTY2
HG00642_chrY	CAT	exon	6087734	6088409	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=intron:HG00642_ch_T0000416:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=intron:HG00642_ch_T0000416:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093629	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=intron:HG00642_ch_T0000416:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093630	6093857	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=intron:HG00642_ch_T0000416:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109726	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=intron:HG00642_ch_T0000416:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109727	6109925	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG00642_ch_T0000416;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000416;transcript_name=HG00642_ch_T0000416;gene_name=TTTY2;ID=exon:HG00642_ch_T0000416:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087734	6096096	1000	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=HG00642_ch_T0000417;Name=TTTY2
HG00642_chrY	CAT	exon	6087734	6088409	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=exon:HG00642_ch_T0000417:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=intron:HG00642_ch_T0000417:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=exon:HG00642_ch_T0000417:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=intron:HG00642_ch_T0000417:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=exon:HG00642_ch_T0000417:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=intron:HG00642_ch_T0000417:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=exon:HG00642_ch_T0000417:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6095969	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=intron:HG00642_ch_T0000417:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6095970	6096096	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00642_ch_T0000417;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000417;transcript_name=HG00642_ch_T0000417;gene_name=TTTY2;ID=exon:HG00642_ch_T0000417:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6087897	6129055	1000	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=HG00642_ch_T0000418;Name=TTTY2
HG00642_chrY	CAT	exon	6087897	6088409	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6092859	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6103814	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6126932	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126933	6127839	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6127840	6128869	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=intron:HG00642_ch_T0000418:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128870	6129055	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000418;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000418;transcript_name=HG00642_ch_T0000418;gene_name=TTTY2;ID=exon:HG00642_ch_T0000418:7;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6088263	6096103	1000	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=HG00642_ch_T0000419;Name=TTTY2
HG00642_chrY	CAT	exon	6088263	6088409	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6089950	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089951	6090029	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6090030	6092859	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6094149	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6094150	6094236	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6094237	6095975	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=intron:HG00642_ch_T0000419:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6095976	6096103	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000419;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000419;transcript_name=HG00642_ch_T0000419;gene_name=TTTY2;ID=exon:HG00642_ch_T0000419:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6088265	6109916	1000	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=HG00642_ch_T0000420;Name=TTTY2
HG00642_chrY	CAT	exon	6088265	6088409	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6088410	6089632	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6089633	6089830	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6089831	6092859	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6092860	6093016	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093629	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093630	6093857	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6101251	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6101252	6101338	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6101339	6103814	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:4;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6103815	6103892	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6103893	6109726	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=intron:HG00642_ch_T0000420:5;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6109727	6109916	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000420;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000420;transcript_name=HG00642_ch_T0000420;gene_name=TTTY2;ID=exon:HG00642_ch_T0000420:6;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6092769	6096113	1000	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_G0000104;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=HG00642_ch_T0000421;Name=TTTY2
HG00642_chrY	CAT	exon	6092769	6093016	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=exon:HG00642_ch_T0000421:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093017	6093708	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=intron:HG00642_ch_T0000421:0;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6093709	6093857	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=exon:HG00642_ch_T0000421:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6093858	6094149	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=intron:HG00642_ch_T0000421:1;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6094150	6094236	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=exon:HG00642_ch_T0000421:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6094237	6095969	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=intron:HG00642_ch_T0000421:2;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6095970	6096113	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00642_ch_T0000421;gene_id=HG00642_ch_G0000104;Parent=HG00642_ch_T0000421;transcript_name=HG00642_ch_T0000421;gene_name=TTTY2;ID=exon:HG00642_ch_T0000421:3;Name=TTTY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6122353	6139393	.	+	.	source_gene_common_name=TTTY7;source_gene=ENSG00000147753.11;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;gene_id=HG00642_ch_G0000105;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG00642_ch_G0000105;Name=TTTY7
HG00642_chrY	CAT	transcript	6122353	6132175	1000	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=HG00642_ch_T0000422;Name=TTTY7
HG00642_chrY	CAT	exon	6122353	6122605	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000422;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=exon:HG00642_ch_T0000422:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6122606	6126246	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000422;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=intron:HG00642_ch_T0000422:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126404	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000422;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=exon:HG00642_ch_T0000422:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6126405	6132012	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000422;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=intron:HG00642_ch_T0000422:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132175	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG00642_ch_T0000422;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000422;transcript_name=HG00642_ch_T0000422;gene_name=TTTY7;ID=exon:HG00642_ch_T0000422:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124810	6132184	1000	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=HG00642_ch_T0000423;Name=TTTY7
HG00642_chrY	CAT	exon	6124810	6125122	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000423;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=exon:HG00642_ch_T0000423:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6126246	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000423;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=intron:HG00642_ch_T0000423:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126404	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000423;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=exon:HG00642_ch_T0000423:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6126405	6132012	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000423;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=intron:HG00642_ch_T0000423:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132184	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG00642_ch_T0000423;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000423;transcript_name=HG00642_ch_T0000423;gene_name=TTTY7;ID=exon:HG00642_ch_T0000423:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124831	6132183	1000	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG00642_ch_T0000424;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000424;gene_name=TTTY7;ID=HG00642_ch_T0000424;Name=TTTY7
HG00642_chrY	CAT	exon	6124831	6125122	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG00642_ch_T0000424;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000424;transcript_name=HG00642_ch_T0000424;gene_name=TTTY7;ID=exon:HG00642_ch_T0000424:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6132012	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG00642_ch_T0000424;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000424;transcript_name=HG00642_ch_T0000424;gene_name=TTTY7;ID=intron:HG00642_ch_T0000424:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132183	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG00642_ch_T0000424;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000424;transcript_name=HG00642_ch_T0000424;gene_name=TTTY7;ID=exon:HG00642_ch_T0000424:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124832	6139393	1000	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=HG00642_ch_T0000425;Name=TTTY7
HG00642_chrY	CAT	exon	6124832	6125122	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6126246	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=intron:HG00642_ch_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126404	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6126405	6132012	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=intron:HG00642_ch_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132094	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6132095	6134314	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=intron:HG00642_ch_T0000425:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6134315	6134476	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6134477	6137558	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=intron:HG00642_ch_T0000425:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=intron:HG00642_ch_T0000425:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG00642_ch_T0000425;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000425;transcript_name=HG00642_ch_T0000425;gene_name=TTTY7;ID=exon:HG00642_ch_T0000425:5;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124832	6139393	1000	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=HG00642_ch_T0000426;Name=TTTY7
HG00642_chrY	CAT	exon	6124832	6125122	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=exon:HG00642_ch_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6132012	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=intron:HG00642_ch_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132094	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=exon:HG00642_ch_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6132095	6134314	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=intron:HG00642_ch_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6134315	6134476	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=exon:HG00642_ch_T0000426:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6134477	6137558	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=intron:HG00642_ch_T0000426:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=exon:HG00642_ch_T0000426:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=intron:HG00642_ch_T0000426:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG00642_ch_T0000426;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000426;transcript_name=HG00642_ch_T0000426;gene_name=TTTY7;ID=exon:HG00642_ch_T0000426:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124832	6132183	1000	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=HG00642_ch_T0000427;Name=TTTY7
HG00642_chrY	CAT	exon	6124832	6125122	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=exon:HG00642_ch_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6126246	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=intron:HG00642_ch_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126404	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=exon:HG00642_ch_T0000427:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6126405	6128459	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=intron:HG00642_ch_T0000427:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128460	6128593	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=exon:HG00642_ch_T0000427:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6128594	6128989	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=intron:HG00642_ch_T0000427:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128990	6129096	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=exon:HG00642_ch_T0000427:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6129097	6132012	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=intron:HG00642_ch_T0000427:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132183	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG00642_ch_T0000427;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000427;transcript_name=HG00642_ch_T0000427;gene_name=TTTY7;ID=exon:HG00642_ch_T0000427:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124834	6132175	1000	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=HG00642_ch_T0000428;Name=TTTY7
HG00642_chrY	CAT	exon	6124834	6125122	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000428;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=exon:HG00642_ch_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6128989	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000428;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=intron:HG00642_ch_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128990	6129096	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000428;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=exon:HG00642_ch_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6129097	6132012	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000428;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=intron:HG00642_ch_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132175	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG00642_ch_T0000428;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000428;transcript_name=HG00642_ch_T0000428;gene_name=TTTY7;ID=exon:HG00642_ch_T0000428:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124835	6132181	1000	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=HG00642_ch_T0000429;Name=TTTY7
HG00642_chrY	CAT	exon	6124835	6125122	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000429;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=exon:HG00642_ch_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6128459	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000429;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=intron:HG00642_ch_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128460	6128593	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000429;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=exon:HG00642_ch_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6128594	6132012	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000429;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=intron:HG00642_ch_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132181	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG00642_ch_T0000429;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000429;transcript_name=HG00642_ch_T0000429;gene_name=TTTY7;ID=exon:HG00642_ch_T0000429:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124835	6132182	1000	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=HG00642_ch_T0000430;Name=TTTY7
HG00642_chrY	CAT	exon	6124835	6125122	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=exon:HG00642_ch_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6128459	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=intron:HG00642_ch_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128460	6128593	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=exon:HG00642_ch_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6128594	6128989	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=intron:HG00642_ch_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128990	6129096	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=exon:HG00642_ch_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6129097	6132012	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=intron:HG00642_ch_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132182	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG00642_ch_T0000430;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000430;transcript_name=HG00642_ch_T0000430;gene_name=TTTY7;ID=exon:HG00642_ch_T0000430:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124836	6126490	1000	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG00642_ch_T0000431;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000431;gene_name=TTTY7;ID=HG00642_ch_T0000431;Name=TTTY7
HG00642_chrY	CAT	exon	6124836	6125122	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG00642_ch_T0000431;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000431;transcript_name=HG00642_ch_T0000431;gene_name=TTTY7;ID=exon:HG00642_ch_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6126246	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG00642_ch_T0000431;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000431;transcript_name=HG00642_ch_T0000431;gene_name=TTTY7;ID=intron:HG00642_ch_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126490	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG00642_ch_T0000431;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000431;transcript_name=HG00642_ch_T0000431;gene_name=TTTY7;ID=exon:HG00642_ch_T0000431:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124857	6139390	1000	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=HG00642_ch_T0000432;Name=TTTY7
HG00642_chrY	CAT	exon	6124857	6125122	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=exon:HG00642_ch_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6132012	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=intron:HG00642_ch_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132094	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=exon:HG00642_ch_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6132095	6134401	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=intron:HG00642_ch_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6134402	6134476	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=exon:HG00642_ch_T0000432:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6134477	6137558	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=intron:HG00642_ch_T0000432:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=exon:HG00642_ch_T0000432:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=intron:HG00642_ch_T0000432:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139390	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG00642_ch_T0000432;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000432;transcript_name=HG00642_ch_T0000432;gene_name=TTTY7;ID=exon:HG00642_ch_T0000432:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6124857	6132178	1000	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=HG00642_ch_T0000433;Name=TTTY7
HG00642_chrY	CAT	exon	6124857	6125122	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=exon:HG00642_ch_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6125123	6126246	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=intron:HG00642_ch_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6126247	6126404	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=exon:HG00642_ch_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6126405	6128459	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=intron:HG00642_ch_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6128460	6128593	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=exon:HG00642_ch_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6128594	6132012	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=intron:HG00642_ch_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132178	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG00642_ch_T0000433;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000433;transcript_name=HG00642_ch_T0000433;gene_name=TTTY7;ID=exon:HG00642_ch_T0000433:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6127240	6132182	1000	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG00642_ch_T0000434;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000434;gene_name=TTTY7;ID=HG00642_ch_T0000434;Name=TTTY7
HG00642_chrY	CAT	exon	6127240	6127539	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG00642_ch_T0000434;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000434;transcript_name=HG00642_ch_T0000434;gene_name=TTTY7;ID=exon:HG00642_ch_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6127540	6132012	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG00642_ch_T0000434;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000434;transcript_name=HG00642_ch_T0000434;gene_name=TTTY7;ID=intron:HG00642_ch_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6132013	6132182	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG00642_ch_T0000434;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000434;transcript_name=HG00642_ch_T0000434;gene_name=TTTY7;ID=exon:HG00642_ch_T0000434:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6130955	6139393	1000	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=HG00642_ch_T0000435;Name=TTTY7
HG00642_chrY	CAT	exon	6130955	6130991	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6130992	6131932	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6131933	6132094	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6132095	6134401	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6134402	6134476	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6134477	6135164	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6135165	6135641	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6135642	6137558	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6138645	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6138646	6138901	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:5;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6138902	6139147	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=intron:HG00642_ch_T0000435:5;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG00642_ch_T0000435;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000435;transcript_name=HG00642_ch_T0000435;gene_name=TTTY7;ID=exon:HG00642_ch_T0000435:6;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6130955	6139393	1000	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=HG00642_ch_T0000436;Name=TTTY7
HG00642_chrY	CAT	exon	6130955	6130991	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6130992	6131932	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=intron:HG00642_ch_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6131933	6132094	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6132095	6134401	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=intron:HG00642_ch_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6134402	6134476	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6134477	6135164	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=intron:HG00642_ch_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6135165	6135641	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6135642	6137558	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=intron:HG00642_ch_T0000436:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=intron:HG00642_ch_T0000436:4;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG00642_ch_T0000436;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000436;transcript_name=HG00642_ch_T0000436;gene_name=TTTY7;ID=exon:HG00642_ch_T0000436:5;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6135373	6139393	1000	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG00642_ch_T0000437;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000437;gene_name=TTTY7;ID=HG00642_ch_T0000437;Name=TTTY7
HG00642_chrY	CAT	exon	6135373	6135641	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG00642_ch_T0000437;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000437;transcript_name=HG00642_ch_T0000437;gene_name=TTTY7;ID=exon:HG00642_ch_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6135642	6139147	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG00642_ch_T0000437;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000437;transcript_name=HG00642_ch_T0000437;gene_name=TTTY7;ID=intron:HG00642_ch_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG00642_ch_T0000437;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000437;transcript_name=HG00642_ch_T0000437;gene_name=TTTY7;ID=exon:HG00642_ch_T0000437:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6135392	6139393	1000	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=HG00642_ch_T0000438;Name=TTTY7
HG00642_chrY	CAT	exon	6135392	6135641	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000438;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=exon:HG00642_ch_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6135642	6137459	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000438;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=intron:HG00642_ch_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137460	6137672	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000438;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=exon:HG00642_ch_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000438;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=intron:HG00642_ch_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG00642_ch_T0000438;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000438;transcript_name=HG00642_ch_T0000438;gene_name=TTTY7;ID=exon:HG00642_ch_T0000438:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6136555	6139393	1000	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=HG00642_ch_T0000439;Name=TTTY7
HG00642_chrY	CAT	exon	6136555	6136918	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=exon:HG00642_ch_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6136919	6137558	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=intron:HG00642_ch_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=exon:HG00642_ch_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6138645	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=intron:HG00642_ch_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6138646	6138901	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=exon:HG00642_ch_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6138902	6139147	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=intron:HG00642_ch_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139393	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG00642_ch_T0000439;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000439;transcript_name=HG00642_ch_T0000439;gene_name=TTTY7;ID=exon:HG00642_ch_T0000439:3;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6136555	6139383	1000	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_G0000105;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=HG00642_ch_T0000440;Name=TTTY7
HG00642_chrY	CAT	exon	6136555	6136918	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000440;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=exon:HG00642_ch_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6136919	6137558	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000440;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=intron:HG00642_ch_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6137559	6137672	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000440;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=exon:HG00642_ch_T0000440:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6137673	6139147	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000440;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=intron:HG00642_ch_T0000440:1;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6139148	6139383	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG00642_ch_T0000440;gene_id=HG00642_ch_G0000105;Parent=HG00642_ch_T0000440;transcript_name=HG00642_ch_T0000440;gene_name=TTTY7;ID=exon:HG00642_ch_T0000440:2;Name=TTTY7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6143875	6155178	.	-	.	source_gene_common_name=TTTY8B;source_gene=ENSG00000185700.11;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;gene_id=HG00642_ch_G0000106;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG00642_ch_G0000106;Name=TTTY8B
HG00642_chrY	CAT	transcript	6143875	6155164	1000	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_G0000106;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=HG00642_ch_T0000441;Name=TTTY8B
HG00642_chrY	CAT	exon	6143875	6144772	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000441;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000441:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6144773	6154299	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000441;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000441:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154300	6154504	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000441;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000441:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6154505	6154981	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000441;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000441:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154982	6155164	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG00642_ch_T0000441;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000441;transcript_name=HG00642_ch_T0000441;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000441:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6144552	6155178	1000	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_G0000106;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=HG00642_ch_T0000442;Name=TTTY8B
HG00642_chrY	CAT	exon	6144552	6144772	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000442;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000442:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6144773	6154299	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000442;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000442:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154300	6154504	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000442;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000442:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6154505	6155138	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000442;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000442:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6155139	6155178	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG00642_ch_T0000442;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000442;transcript_name=HG00642_ch_T0000442;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000442:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6152260	6155148	1000	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_G0000106;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=HG00642_ch_T0000443;Name=TTTY8B
HG00642_chrY	CAT	exon	6152260	6152436	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000443;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000443:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6152437	6154299	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000443;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000443:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154300	6154504	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000443;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000443:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6154505	6154981	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000443;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000443:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154982	6155148	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG00642_ch_T0000443;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000443;transcript_name=HG00642_ch_T0000443;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000443:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6152518	6155142	1000	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_G0000106;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=HG00642_ch_T0000444;Name=TTTY8B
HG00642_chrY	CAT	exon	6152518	6152707	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000444;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6152708	6154299	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000444;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154300	6154504	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000444;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6154505	6154981	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000444;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154982	6155142	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG00642_ch_T0000444;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000444;transcript_name=HG00642_ch_T0000444;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000444:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6152518	6155178	1000	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_G0000106;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=HG00642_ch_T0000445;Name=TTTY8B
HG00642_chrY	CAT	exon	6152518	6152707	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000445;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6152708	6154299	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000445;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6154300	6154504	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000445;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6154505	6155138	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000445;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=intron:HG00642_ch_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6155139	6155178	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG00642_ch_T0000445;gene_id=HG00642_ch_G0000106;Parent=HG00642_ch_T0000445;transcript_name=HG00642_ch_T0000445;gene_name=TTTY8B;ID=exon:HG00642_ch_T0000445:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6174466	6178247	.	-	.	source_gene_common_name=ENSG00000235895;source_gene=ENSG00000235895.1;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;gene_id=HG00642_ch_G0000107;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235895;gene_sources=liftoff;ID=HG00642_ch_G0000107;Name=ENSG00000235895
HG00642_chrY	CAT	transcript	6174466	6178247	1000	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00642_ch_T0000446;gene_id=HG00642_ch_G0000107;Parent=HG00642_ch_G0000107;transcript_name=HG00642_ch_T0000446;gene_name=ENSG00000235895;ID=HG00642_ch_T0000446;Name=ENSG00000235895
HG00642_chrY	CAT	exon	6174466	6174561	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00642_ch_T0000446;gene_id=HG00642_ch_G0000107;Parent=HG00642_ch_T0000446;transcript_name=HG00642_ch_T0000446;gene_name=ENSG00000235895;ID=exon:HG00642_ch_T0000446:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6174562	6178074	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00642_ch_T0000446;gene_id=HG00642_ch_G0000107;Parent=HG00642_ch_T0000446;transcript_name=HG00642_ch_T0000446;gene_name=ENSG00000235895;ID=intron:HG00642_ch_T0000446:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6178075	6178247	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00642_ch_T0000446;gene_id=HG00642_ch_G0000107;Parent=HG00642_ch_T0000446;transcript_name=HG00642_ch_T0000446;gene_name=ENSG00000235895;ID=exon:HG00642_ch_T0000446:1;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6201953	6202420	.	+	.	source_gene_common_name=TSPY17P;source_gene=ENSG00000232620.1;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;gene_id=HG00642_ch_G0000108;gene_biotype=unprocessed_pseudogene;gene_name=TSPY17P;gene_sources=liftoff;ID=HG00642_ch_G0000108;Name=TSPY17P
HG00642_chrY	CAT	transcript	6201953	6202420	1000	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG00642_ch_T0000447;gene_id=HG00642_ch_G0000108;Parent=HG00642_ch_G0000108;transcript_name=HG00642_ch_T0000447;gene_name=TSPY17P;ID=HG00642_ch_T0000447;Name=TSPY17P
HG00642_chrY	CAT	exon	6201953	6202420	.	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG00642_ch_T0000447;gene_id=HG00642_ch_G0000108;Parent=HG00642_ch_T0000447;transcript_name=HG00642_ch_T0000447;gene_name=TSPY17P;ID=exon:HG00642_ch_T0000447:0;Name=TSPY17P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6400460	6400678	.	-	.	source_gene_common_name=SRIP3;source_gene=ENSG00000224953.1;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;gene_id=HG00642_ch_G0000109;gene_biotype=processed_pseudogene;gene_name=SRIP3;gene_sources=liftoff;ID=HG00642_ch_G0000109;Name=SRIP3
HG00642_chrY	CAT	transcript	6400460	6400678	1000	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG00642_ch_T0000448;gene_id=HG00642_ch_G0000109;Parent=HG00642_ch_G0000109;transcript_name=HG00642_ch_T0000448;gene_name=SRIP3;ID=HG00642_ch_T0000448;Name=SRIP3
HG00642_chrY	CAT	exon	6400460	6400678	.	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG00642_ch_T0000448;gene_id=HG00642_ch_G0000109;Parent=HG00642_ch_T0000448;transcript_name=HG00642_ch_T0000448;gene_name=SRIP3;ID=exon:HG00642_ch_T0000448:0;Name=SRIP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6470652	6470843	.	+	.	source_gene_common_name=ENSG00000274365;source_gene=ENSG00000274365.1;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;gene_id=HG00642_ch_G0000110;gene_biotype=processed_pseudogene;gene_name=ENSG00000274365;gene_sources=liftoff;ID=HG00642_ch_G0000110;Name=ENSG00000274365
HG00642_chrY	CAT	transcript	6470652	6470843	1000	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG00642_ch_T0000449;gene_id=HG00642_ch_G0000110;Parent=HG00642_ch_G0000110;transcript_name=HG00642_ch_T0000449;gene_name=ENSG00000274365;ID=HG00642_ch_T0000449;Name=ENSG00000274365
HG00642_chrY	CAT	exon	6470652	6470843	.	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG00642_ch_T0000449;gene_id=HG00642_ch_G0000110;Parent=HG00642_ch_T0000449;transcript_name=HG00642_ch_T0000449;gene_name=ENSG00000274365;ID=exon:HG00642_ch_T0000449:0;Name=ENSG00000274365;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6519208	6519753	.	+	.	source_gene_common_name=GOT2P5;source_gene=ENSG00000233634.1;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;gene_id=HG00642_ch_G0000111;gene_biotype=processed_pseudogene;gene_name=GOT2P5;gene_sources=liftoff;ID=HG00642_ch_G0000111;Name=GOT2P5
HG00642_chrY	CAT	transcript	6519208	6519753	1000	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG00642_ch_T0000450;gene_id=HG00642_ch_G0000111;Parent=HG00642_ch_G0000111;transcript_name=HG00642_ch_T0000450;gene_name=GOT2P5;ID=HG00642_ch_T0000450;Name=GOT2P5
HG00642_chrY	CAT	exon	6519208	6519753	.	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG00642_ch_T0000450;gene_id=HG00642_ch_G0000111;Parent=HG00642_ch_T0000450;transcript_name=HG00642_ch_T0000450;gene_name=GOT2P5;ID=exon:HG00642_ch_T0000450:0;Name=GOT2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6547419	6593253	.	-	.	source_gene_common_name=AMELY;source_gene=ENSG00000099721.16;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;gene_id=HG00642_ch_G0000112;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff;ID=HG00642_ch_G0000112;Name=AMELY
HG00642_chrY	CAT	transcript	6547419	6593253	100	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_G0000112;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=HG00642_ch_T0000451;Name=AMELY
HG00642_chrY	CAT	exon	6547419	6547579	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6547574	6547579	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=CDS:HG00642_ch_T0000451:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6547574	6547576	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=stop_codon:HG00642_ch_T0000451;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6547580	6549537	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6549538	6549963	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6549538	6549963	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=CDS:HG00642_ch_T0000451:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6549964	6550232	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6550233	6550277	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6550233	6550277	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=CDS:HG00642_ch_T0000451:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6550278	6551506	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6551507	6551554	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6551507	6551554	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=CDS:HG00642_ch_T0000451:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6551555	6554055	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6554056	6554121	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6554056	6554109	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=CDS:HG00642_ch_T0000451:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	6554107	6554109	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=start_codon:HG00642_ch_T0000451;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6554122	6555472	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6555473	6555572	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:5;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6555573	6593173	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=intron:HG00642_ch_T0000451:5;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6593174	6593253	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00642_ch_T0000451;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000451;transcript_name=HG00642_ch_T0000451;gene_name=AMELY;ID=exon:HG00642_ch_T0000451:6;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6547574	6554109	100	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_G0000112;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=HG00642_ch_T0000452;Name=AMELY
HG00642_chrY	CAT	exon	6547574	6547579	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6547574	6547579	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6547574	6547576	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=stop_codon:HG00642_ch_T0000452;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6547580	6549537	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=intron:HG00642_ch_T0000452:0;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6549538	6549963	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6549538	6549963	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6549964	6550232	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=intron:HG00642_ch_T0000452:1;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6550233	6550277	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6550233	6550277	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6550278	6550368	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=intron:HG00642_ch_T0000452:2;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6550369	6550410	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6550369	6550410	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6550411	6551506	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=intron:HG00642_ch_T0000452:3;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6551507	6551554	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6551507	6551554	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6551555	6554055	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=intron:HG00642_ch_T0000452:4;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6554056	6554109	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=exon:HG00642_ch_T0000452:5;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6554056	6554109	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=CDS:HG00642_ch_T0000452:5;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	6554107	6554109	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00642_ch_T0000452;gene_id=HG00642_ch_G0000112;Parent=HG00642_ch_T0000452;transcript_name=HG00642_ch_T0000452;gene_name=AMELY;ID=start_codon:HG00642_ch_T0000452;Name=AMELY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6582254	6582873	.	+	.	source_gene_common_name=ATP5PFP1;source_gene=ENSG00000237701.1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;gene_id=HG00642_ch_G0000113;gene_biotype=processed_pseudogene;gene_name=ATP5PFP1;gene_sources=liftoff;ID=HG00642_ch_G0000113;Name=ATP5PFP1
HG00642_chrY	CAT	transcript	6582254	6582873	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00642_ch_T0000453;gene_id=HG00642_ch_G0000113;Parent=HG00642_ch_G0000113;transcript_name=HG00642_ch_T0000453;gene_name=ATP5PFP1;ID=HG00642_ch_T0000453;Name=ATP5PFP1
HG00642_chrY	CAT	exon	6582254	6582349	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00642_ch_T0000453;gene_id=HG00642_ch_G0000113;Parent=HG00642_ch_T0000453;transcript_name=HG00642_ch_T0000453;gene_name=ATP5PFP1;ID=exon:HG00642_ch_T0000453:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6582350	6582647	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00642_ch_T0000453;gene_id=HG00642_ch_G0000113;Parent=HG00642_ch_T0000453;transcript_name=HG00642_ch_T0000453;gene_name=ATP5PFP1;ID=intron:HG00642_ch_T0000453:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6582648	6582873	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00642_ch_T0000453;gene_id=HG00642_ch_G0000113;Parent=HG00642_ch_T0000453;transcript_name=HG00642_ch_T0000453;gene_name=ATP5PFP1;ID=exon:HG00642_ch_T0000453:1;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6592187	6783465	.	+	.	source_gene_common_name=TBL1Y;source_gene=ENSG00000092377.15;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;gene_id=HG00642_ch_G0000114;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff;ID=HG00642_ch_G0000114;Name=TBL1Y
HG00642_chrY	CAT	transcript	6592187	6773178	100	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_G0000114;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=HG00642_ch_T0000454;Name=TBL1Y
HG00642_chrY	CAT	exon	6592187	6592483	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6592484	6593588	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6593589	6593673	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6593674	6659713	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6659714	6659744	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6659745	6702945	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6702946	6703034	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6703035	6706531	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6706532	6706639	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6706582	6706639	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	6706582	6706584	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=start_codon:HG00642_ch_T0000454;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6706640	6724475	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6724476	6724621	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6724476	6724621	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6724622	6745391	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6745392	6745644	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6745392	6745644	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6745645	6751690	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6751691	6751823	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6751691	6751823	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6751824	6752214	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6752215	6752356	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6752215	6752356	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6752357	6753054	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753055	6753118	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753055	6753118	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753119	6753227	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753228	6753325	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753228	6753325	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753326	6756054	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6756055	6756115	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6756055	6756115	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6756116	6762226	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6762227	6762348	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6762227	6762348	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6762349	6767392	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767393	6767467	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767393	6767467	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767468	6767784	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767785	6767912	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767785	6767912	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767913	6768761	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6768762	6768927	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6768762	6768927	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6768928	6771583	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6771584	6771685	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6771584	6771685	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6771686	6772966	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000454:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6772967	6773178	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000454:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6772967	6772987	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000454:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6772985	6772987	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00642_ch_T0000454;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000454;transcript_name=HG00642_ch_T0000454;gene_name=TBL1Y;ID=stop_codon:HG00642_ch_T0000454;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6592187	6773178	100	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_G0000114;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=HG00642_ch_T0000455;Name=TBL1Y
HG00642_chrY	CAT	exon	6592187	6592483	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6592484	6593588	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6593589	6593673	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6593674	6677300	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6677301	6677395	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6677396	6702945	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6702946	6703034	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6703035	6706531	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6706532	6706639	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6706582	6706639	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	6706582	6706584	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=start_codon:HG00642_ch_T0000455;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6706640	6724475	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6724476	6724621	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6724476	6724621	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6724622	6745391	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6745392	6745644	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6745392	6745644	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6745645	6751690	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6751691	6751823	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6751691	6751823	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6751824	6752214	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6752215	6752356	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6752215	6752356	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6752357	6753054	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753055	6753118	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753055	6753118	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753119	6753227	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753228	6753325	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753228	6753325	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753326	6756054	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6756055	6756115	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6756055	6756115	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6756116	6762226	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6762227	6762348	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6762227	6762348	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6762349	6767392	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767393	6767467	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767393	6767467	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767468	6767784	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767785	6767912	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767785	6767912	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767913	6768761	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6768762	6768927	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6768762	6768927	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6768928	6771583	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6771584	6771685	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6771584	6771685	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6771686	6772966	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000455:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6772967	6773178	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000455:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6772967	6772987	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000455:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6772985	6772987	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00642_ch_T0000455;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000455;transcript_name=HG00642_ch_T0000455;gene_name=TBL1Y;ID=stop_codon:HG00642_ch_T0000455;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6592198	6773178	100	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_G0000114;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=HG00642_ch_T0000456;Name=TBL1Y
HG00642_chrY	CAT	exon	6592198	6592483	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6592484	6593588	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6593589	6593673	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6593674	6659713	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6659714	6659744	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6659745	6677300	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6677301	6677395	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6677396	6702945	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6702946	6703034	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6703035	6706531	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6706532	6706639	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6706582	6706639	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	6706582	6706584	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=start_codon:HG00642_ch_T0000456;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6706640	6724475	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6724476	6724621	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6724476	6724621	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6724622	6745391	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6745392	6745644	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6745392	6745644	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6745645	6751690	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6751691	6751823	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6751691	6751823	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6751824	6752214	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6752215	6752356	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6752215	6752356	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6752357	6753054	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753055	6753118	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753055	6753118	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753119	6753227	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6753228	6753325	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6753228	6753325	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6753326	6756054	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6756055	6756115	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6756055	6756115	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6756116	6762226	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6762227	6762348	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6762227	6762348	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6762349	6767392	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767393	6767467	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767393	6767467	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767468	6767784	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6767785	6767912	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767785	6767912	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767913	6768761	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6768762	6768927	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6768762	6768927	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6768928	6771583	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6771584	6771685	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6771584	6771685	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6771686	6772966	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000456:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6772967	6773178	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000456:18;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6772967	6772987	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000456:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6772985	6772987	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00642_ch_T0000456;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000456;transcript_name=HG00642_ch_T0000456;gene_name=TBL1Y;ID=stop_codon:HG00642_ch_T0000456;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6767876	6783465	100	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_G0000114;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=HG00642_ch_T0000458;Name=TBL1Y
HG00642_chrY	CAT	exon	6767876	6767912	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6767876	6767912	.	+	2	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6767913	6768761	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6768762	6768927	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6768762	6768927	.	+	1	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6768928	6771583	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6771584	6771685	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6771584	6771685	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6771686	6782279	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6782280	6782345	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6782280	6782345	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6782346	6783313	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=intron:HG00642_ch_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6783314	6783465	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=exon:HG00642_ch_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	6783314	6783361	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=CDS:HG00642_ch_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	6783359	6783361	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00642_ch_T0000458;gene_id=HG00642_ch_G0000114;Parent=HG00642_ch_T0000458;transcript_name=HG00642_ch_T0000458;gene_name=TBL1Y;ID=stop_codon:HG00642_ch_T0000458;Name=TBL1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6600183	6602292	.	+	.	source_gene_common_name=ENSG00000273906;source_gene=ENSG00000273906.1;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;gene_id=HG00642_ch_G0000115;gene_biotype=lncRNA;gene_name=ENSG00000273906;gene_sources=liftoff;ID=HG00642_ch_G0000115;Name=ENSG00000273906
HG00642_chrY	CAT	transcript	6600183	6602292	1000	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG00642_ch_T0000457;gene_id=HG00642_ch_G0000115;Parent=HG00642_ch_G0000115;transcript_name=HG00642_ch_T0000457;gene_name=ENSG00000273906;ID=HG00642_ch_T0000457;Name=ENSG00000273906
HG00642_chrY	CAT	exon	6600183	6602292	.	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG00642_ch_T0000457;gene_id=HG00642_ch_G0000115;Parent=HG00642_ch_T0000457;transcript_name=HG00642_ch_T0000457;gene_name=ENSG00000273906;ID=exon:HG00642_ch_T0000457:0;Name=ENSG00000273906;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6781564	6859301	.	-	.	source_gene_common_name=ENSG00000309393;source_gene=ENSG00000309393.1;gene_id=HG00642_ch_G0000116;gene_biotype=lncRNA;gene_name=ENSG00000309393;gene_sources=liftoff;ID=HG00642_ch_G0000116;Name=ENSG00000309393
HG00642_chrY	CAT	transcript	6781564	6859311	1000	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000459;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_G0000116;transcript_name=HG00642_ch_T0000459;gene_name=ENSG00000309393;ID=HG00642_ch_T0000459;Name=ENSG00000309393
HG00642_chrY	CAT	exon	6781564	6782322	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000459;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000459;transcript_name=HG00642_ch_T0000459;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000459:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6782323	6859158	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000459;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000459;transcript_name=HG00642_ch_T0000459;gene_name=ENSG00000309393;ID=intron:HG00642_ch_T0000459:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6859159	6859311	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000459;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000459;transcript_name=HG00642_ch_T0000459;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000459:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6781891	6859301	1000	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000460;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_G0000116;transcript_name=HG00642_ch_T0000460;gene_name=ENSG00000309393;ID=HG00642_ch_T0000460;Name=ENSG00000309393
HG00642_chrY	CAT	exon	6781891	6782322	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000460;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000460;transcript_name=HG00642_ch_T0000460;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000460:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6782323	6859198	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000460;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000460;transcript_name=HG00642_ch_T0000460;gene_name=ENSG00000309393;ID=intron:HG00642_ch_T0000460:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6859199	6859301	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000460;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000460;transcript_name=HG00642_ch_T0000460;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000460:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6781892	6788216	1000	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000461;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_G0000116;transcript_name=HG00642_ch_T0000461;gene_name=ENSG00000309393;ID=HG00642_ch_T0000461;Name=ENSG00000309393
HG00642_chrY	CAT	exon	6781892	6782322	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000461;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000461;transcript_name=HG00642_ch_T0000461;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000461:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6782323	6788051	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000461;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000461;transcript_name=HG00642_ch_T0000461;gene_name=ENSG00000309393;ID=intron:HG00642_ch_T0000461:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6788052	6788216	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00642_ch_T0000461;gene_id=HG00642_ch_G0000116;Parent=HG00642_ch_T0000461;transcript_name=HG00642_ch_T0000461;gene_name=ENSG00000309393;ID=exon:HG00642_ch_T0000461:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6782228	6787997	.	-	.	source_gene_common_name=GPR143YP;source_gene=ENSG00000232583.1;gene_id=HG00642_ch_G0000117;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GPR143YP;gene_sources=liftoff;ID=HG00642_ch_G0000117;Name=GPR143YP
HG00642_chrY	CAT	transcript	6782228	6787997	1000	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00642_ch_T0000462;gene_id=HG00642_ch_G0000117;Parent=HG00642_ch_G0000117;transcript_name=HG00642_ch_T0000462;gene_name=GPR143YP;ID=HG00642_ch_T0000462;Name=GPR143YP
HG00642_chrY	CAT	exon	6782228	6782322	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00642_ch_T0000462;gene_id=HG00642_ch_G0000117;Parent=HG00642_ch_T0000462;transcript_name=HG00642_ch_T0000462;gene_name=GPR143YP;ID=exon:HG00642_ch_T0000462:0;Name=GPR143YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6782323	6787887	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00642_ch_T0000462;gene_id=HG00642_ch_G0000117;Parent=HG00642_ch_T0000462;transcript_name=HG00642_ch_T0000462;gene_name=GPR143YP;ID=intron:HG00642_ch_T0000462:0;Name=GPR143YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6787888	6787997	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00642_ch_T0000462;gene_id=HG00642_ch_G0000117;Parent=HG00642_ch_T0000462;transcript_name=HG00642_ch_T0000462;gene_name=GPR143YP;ID=exon:HG00642_ch_T0000462:1;Name=GPR143YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6955471	7063044	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000293442.2;gene_id=HG00642_ch_G0000118;gene_biotype=lncRNA;gene_name=PRKY;gene_sources=liftoff;ID=HG00642_ch_G0000118;Name=PRKY
HG00642_chrY	CAT	transcript	6955471	7063044	1000	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=HG00642_ch_T0000463;Name=PRKY
HG00642_chrY	CAT	exon	6955471	6955977	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6955978	6985431	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6985432	6985600	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6985601	7007400	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7007401	7007664	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7022609	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7057207	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=intron:HG00642_ch_T0000463:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7057208	7063044	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000463;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000463;transcript_name=HG00642_ch_T0000463;gene_name=PRKY;ID=exon:HG00642_ch_T0000463:7;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6956076	6972256	1000	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000465;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000465;gene_name=PRKY;ID=HG00642_ch_T0000465;Name=PRKY
HG00642_chrY	CAT	exon	6956076	6956564	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000465;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000465;transcript_name=HG00642_ch_T0000465;gene_name=PRKY;ID=exon:HG00642_ch_T0000465:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6956565	6972013	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000465;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000465;transcript_name=HG00642_ch_T0000465;gene_name=PRKY;ID=intron:HG00642_ch_T0000465:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6972014	6972256	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000465;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000465;transcript_name=HG00642_ch_T0000465;gene_name=PRKY;ID=exon:HG00642_ch_T0000465:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6956273	6972256	1000	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=HG00642_ch_T0000466;Name=PRKY
HG00642_chrY	CAT	exon	6956273	6956564	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000466;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=exon:HG00642_ch_T0000466:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6956565	6966526	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000466;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=intron:HG00642_ch_T0000466:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6966527	6966618	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000466;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=exon:HG00642_ch_T0000466:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6966619	6972013	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000466;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=intron:HG00642_ch_T0000466:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6972014	6972256	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000466;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000466;transcript_name=HG00642_ch_T0000466;gene_name=PRKY;ID=exon:HG00642_ch_T0000466:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6956325	7057595	1000	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=HG00642_ch_T0000467;Name=PRKY
HG00642_chrY	CAT	exon	6956325	6956564	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6956565	6985431	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6985432	6985600	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6985601	7007400	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7007401	7007664	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7009521	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7009522	7009643	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7009644	7022609	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:7;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7057207	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=intron:HG00642_ch_T0000467:7;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7057208	7057595	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000467;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000467;transcript_name=HG00642_ch_T0000467;gene_name=PRKY;ID=exon:HG00642_ch_T0000467:8;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6956417	7023710	1000	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=HG00642_ch_T0000468;Name=PRKY
HG00642_chrY	CAT	exon	6956417	6956564	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=exon:HG00642_ch_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6956565	6985431	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=intron:HG00642_ch_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6985432	6985600	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=exon:HG00642_ch_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6985601	7007400	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=intron:HG00642_ch_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7007401	7007664	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=exon:HG00642_ch_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7022609	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=intron:HG00642_ch_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7023710	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000468;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000468;transcript_name=HG00642_ch_T0000468;gene_name=PRKY;ID=exon:HG00642_ch_T0000468:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	6956461	7057923	1000	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=HG00642_ch_T0000469;Name=PRKY
HG00642_chrY	CAT	exon	6956461	6956564	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6956565	6985431	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6985432	6985600	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6985601	7007400	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7007401	7007664	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7037629	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7057207	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=intron:HG00642_ch_T0000469:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7057208	7057923	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000469;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000469;transcript_name=HG00642_ch_T0000469;gene_name=PRKY;ID=exon:HG00642_ch_T0000469:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7007562	7009898	1000	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000471;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000471;gene_name=PRKY;ID=HG00642_ch_T0000471;Name=PRKY
HG00642_chrY	CAT	exon	7007562	7007664	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000471;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000471;transcript_name=HG00642_ch_T0000471;gene_name=PRKY;ID=exon:HG00642_ch_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7009521	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000471;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000471;transcript_name=HG00642_ch_T0000471;gene_name=PRKY;ID=intron:HG00642_ch_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7009522	7009898	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000471;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000471;transcript_name=HG00642_ch_T0000471;gene_name=PRKY;ID=exon:HG00642_ch_T0000471:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7014525	7037718	1000	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=HG00642_ch_T0000472;Name=PRKY
HG00642_chrY	CAT	exon	7014525	7014603	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000472;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=exon:HG00642_ch_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7014604	7022609	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000472;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=intron:HG00642_ch_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000472;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=exon:HG00642_ch_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000472;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=intron:HG00642_ch_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037718	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000472;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000472;transcript_name=HG00642_ch_T0000472;gene_name=PRKY;ID=exon:HG00642_ch_T0000472:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7021455	7057595	1000	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=HG00642_ch_T0000473;Name=PRKY
HG00642_chrY	CAT	exon	7021455	7021517	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7021518	7022609	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=intron:HG00642_ch_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=intron:HG00642_ch_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=intron:HG00642_ch_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=intron:HG00642_ch_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7057207	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=intron:HG00642_ch_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7057208	7057595	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000473;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000473;transcript_name=HG00642_ch_T0000473;gene_name=PRKY;ID=exon:HG00642_ch_T0000473:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7021456	7054611	1000	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=HG00642_ch_T0000474;Name=PRKY
HG00642_chrY	CAT	exon	7021456	7021517	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7021518	7022609	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=intron:HG00642_ch_T0000474:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=intron:HG00642_ch_T0000474:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=intron:HG00642_ch_T0000474:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=intron:HG00642_ch_T0000474:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7054227	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=intron:HG00642_ch_T0000474:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7054228	7054611	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000474;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000474;transcript_name=HG00642_ch_T0000474;gene_name=PRKY;ID=exon:HG00642_ch_T0000474:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7021514	7057596	1000	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_G0000118;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=HG00642_ch_T0000475;Name=PRKY
HG00642_chrY	CAT	exon	7021514	7021659	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7021660	7022609	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=intron:HG00642_ch_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=intron:HG00642_ch_T0000475:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=intron:HG00642_ch_T0000475:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=intron:HG00642_ch_T0000475:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053385	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7053386	7057207	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=intron:HG00642_ch_T0000475:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7057208	7057596	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000475;gene_id=HG00642_ch_G0000118;Parent=HG00642_ch_T0000475;transcript_name=HG00642_ch_T0000475;gene_name=PRKY;ID=exon:HG00642_ch_T0000475:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	6955812	7053364	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000099725.15;gene_id=HG00642_ch_G0000119;gene_biotype=transcribed_unitary_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG00642_ch_G0000119;Name=PRKY
HG00642_chrY	CAT	transcript	6955812	7053364	1000	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_G0000119;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=HG00642_ch_T0000464;Name=PRKY
HG00642_chrY	CAT	exon	6955812	6955977	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6955978	6985431	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:0;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	6985432	6985600	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	6985601	7007400	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:1;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7007401	7007664	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7007665	7022609	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:2;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7022610	7022729	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7022730	7037629	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:3;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7037630	7037725	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7037726	7048850	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:4;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7048851	7048928	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7048929	7053238	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=intron:HG00642_ch_T0000464:5;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7053239	7053364	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00642_ch_T0000464;gene_id=HG00642_ch_G0000119;Parent=HG00642_ch_T0000464;transcript_name=HG00642_ch_T0000464;gene_name=PRKY;ID=exon:HG00642_ch_T0000464:6;Name=PRKY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7005792	7006090	.	-	.	source_gene_common_name=RN7SKP282;source_gene=ENSG00000252633.1;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;gene_id=HG00642_ch_G0000120;gene_biotype=misc_RNA;gene_name=RN7SKP282;gene_sources=liftoff;ID=HG00642_ch_G0000120;Name=RN7SKP282
HG00642_chrY	CAT	transcript	7005792	7006090	1000	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG00642_ch_T0000470;gene_id=HG00642_ch_G0000120;Parent=HG00642_ch_G0000120;transcript_name=HG00642_ch_T0000470;gene_name=RN7SKP282;ID=HG00642_ch_T0000470;Name=RN7SKP282
HG00642_chrY	CAT	exon	7005792	7006090	.	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG00642_ch_T0000470;gene_id=HG00642_ch_G0000120;Parent=HG00642_ch_T0000470;transcript_name=HG00642_ch_T0000470;gene_name=RN7SKP282;ID=exon:HG00642_ch_T0000470:0;Name=RN7SKP282;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7023026	7023137	.	+	.	source_gene_common_name=Y_RNA;source_gene=ENSG00000251996.1;gene_id=HG00642_ch_G0000121;gene_biotype=misc_RNA;gene_name=Y_RNA;gene_sources=liftoff;ID=HG00642_ch_G0000121;Name=Y_RNA
HG00642_chrY	CAT	transcript	7023026	7023137	1000	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG00642_ch_T0000476;gene_id=HG00642_ch_G0000121;Parent=HG00642_ch_G0000121;transcript_name=HG00642_ch_T0000476;gene_name=Y_RNA;ID=HG00642_ch_T0000476;Name=Y_RNA
HG00642_chrY	CAT	exon	7023026	7023137	.	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG00642_ch_T0000476;gene_id=HG00642_ch_G0000121;Parent=HG00642_ch_T0000476;transcript_name=HG00642_ch_T0000476;gene_name=Y_RNA;ID=exon:HG00642_ch_T0000476:0;Name=Y_RNA;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7060168	7060275	.	+	.	source_gene_common_name=RNU6-941P;source_gene=ENSG00000252155.1;gene_id=HG00642_ch_G0000122;gene_biotype=snRNA;gene_name=RNU6-941P;gene_sources=liftoff;ID=HG00642_ch_G0000122;Name=RNU6-941P
HG00642_chrY	CAT	transcript	7060168	7060275	1000	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG00642_ch_T0000477;gene_id=HG00642_ch_G0000122;Parent=HG00642_ch_G0000122;transcript_name=HG00642_ch_T0000477;gene_name=RNU6-941P;ID=HG00642_ch_T0000477;Name=RNU6-941P
HG00642_chrY	CAT	exon	7060168	7060275	.	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG00642_ch_T0000477;gene_id=HG00642_ch_G0000122;Parent=HG00642_ch_T0000477;transcript_name=HG00642_ch_T0000477;gene_name=RNU6-941P;ID=exon:HG00642_ch_T0000477:0;Name=RNU6-941P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7104550	7104654	.	-	.	source_gene_common_name=RNU6-521P;source_gene=ENSG00000252472.1;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;gene_id=HG00642_ch_G0000123;gene_biotype=snRNA;gene_name=RNU6-521P;gene_sources=liftoff;ID=HG00642_ch_G0000123;Name=RNU6-521P
HG00642_chrY	CAT	transcript	7104550	7104654	1000	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG00642_ch_T0000478;gene_id=HG00642_ch_G0000123;Parent=HG00642_ch_G0000123;transcript_name=HG00642_ch_T0000478;gene_name=RNU6-521P;ID=HG00642_ch_T0000478;Name=RNU6-521P
HG00642_chrY	CAT	exon	7104550	7104654	.	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG00642_ch_T0000478;gene_id=HG00642_ch_G0000123;Parent=HG00642_ch_T0000478;transcript_name=HG00642_ch_T0000478;gene_name=RNU6-521P;ID=exon:HG00642_ch_T0000478:0;Name=RNU6-521P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7115984	7202030	.	+	.	source_gene_common_name=ENSG00000295056;source_gene=ENSG00000295056.1;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;gene_id=HG00642_ch_G0000124;gene_biotype=lncRNA;gene_name=ENSG00000295056;gene_sources=liftoff;ID=HG00642_ch_G0000124;Name=ENSG00000295056
HG00642_chrY	CAT	transcript	7115984	7202030	1000	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_G0000124;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=HG00642_ch_T0000479;Name=ENSG00000295056
HG00642_chrY	CAT	exon	7115984	7116073	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=exon:HG00642_ch_T0000479:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7116074	7182497	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=intron:HG00642_ch_T0000479:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7182498	7182656	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=exon:HG00642_ch_T0000479:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7182657	7200428	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=intron:HG00642_ch_T0000479:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7200429	7200537	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=exon:HG00642_ch_T0000479:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7200538	7201569	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=intron:HG00642_ch_T0000479:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7201570	7202030	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00642_ch_T0000479;gene_id=HG00642_ch_G0000124;Parent=HG00642_ch_T0000479;transcript_name=HG00642_ch_T0000479;gene_name=ENSG00000295056;ID=exon:HG00642_ch_T0000479:3;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7339285	7339669	.	+	.	source_gene_common_name=ENSG00000275280;source_gene=ENSG00000275280.1;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;gene_id=HG00642_ch_G0000125;gene_biotype=processed_pseudogene;gene_name=ENSG00000275280;gene_sources=liftoff;ID=HG00642_ch_G0000125;Name=ENSG00000275280
HG00642_chrY	CAT	transcript	7339285	7339669	1000	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG00642_ch_T0000480;gene_id=HG00642_ch_G0000125;Parent=HG00642_ch_G0000125;transcript_name=HG00642_ch_T0000480;gene_name=ENSG00000275280;ID=HG00642_ch_T0000480;Name=ENSG00000275280
HG00642_chrY	CAT	exon	7339285	7339669	.	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG00642_ch_T0000480;gene_id=HG00642_ch_G0000125;Parent=HG00642_ch_T0000480;transcript_name=HG00642_ch_T0000480;gene_name=ENSG00000275280;ID=exon:HG00642_ch_T0000480:0;Name=ENSG00000275280;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7354077	7358358	.	-	.	source_gene_common_name=RBMY2HP;source_gene=ENSG00000238073.1;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;gene_id=HG00642_ch_G0000126;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2HP;gene_sources=liftoff;ID=HG00642_ch_G0000126;Name=RBMY2HP
HG00642_chrY	CAT	transcript	7354077	7358358	1000	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_G0000126;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=HG00642_ch_T0000481;Name=RBMY2HP
HG00642_chrY	CAT	exon	7354077	7354376	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=exon:HG00642_ch_T0000481:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7354377	7354783	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=intron:HG00642_ch_T0000481:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7354784	7354872	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=exon:HG00642_ch_T0000481:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7354873	7354961	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=intron:HG00642_ch_T0000481:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7354962	7355072	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=exon:HG00642_ch_T0000481:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7355073	7357699	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=intron:HG00642_ch_T0000481:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7357700	7357805	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=exon:HG00642_ch_T0000481:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7357806	7358244	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=intron:HG00642_ch_T0000481:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7358245	7358358	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00642_ch_T0000481;gene_id=HG00642_ch_G0000126;Parent=HG00642_ch_T0000481;transcript_name=HG00642_ch_T0000481;gene_name=RBMY2HP;ID=exon:HG00642_ch_T0000481:4;Name=RBMY2HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7361234	7363363	.	+	.	source_gene_common_name=ENSG00000223422;source_gene=ENSG00000223422.1;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;gene_id=HG00642_ch_G0000127;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000223422;gene_sources=liftoff;ID=HG00642_ch_G0000127;Name=ENSG00000223422
HG00642_chrY	CAT	transcript	7361234	7363363	1000	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_G0000127;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=HG00642_ch_T0000482;Name=ENSG00000223422
HG00642_chrY	CAT	exon	7361234	7361545	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=exon:HG00642_ch_T0000482:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7361546	7362601	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=intron:HG00642_ch_T0000482:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7362602	7362667	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=exon:HG00642_ch_T0000482:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7362668	7362862	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=intron:HG00642_ch_T0000482:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7362863	7362955	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=exon:HG00642_ch_T0000482:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7362956	7363054	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=intron:HG00642_ch_T0000482:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7363055	7363199	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=exon:HG00642_ch_T0000482:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7363200	7363317	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=intron:HG00642_ch_T0000482:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7363318	7363363	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00642_ch_T0000482;gene_id=HG00642_ch_G0000127;Parent=HG00642_ch_T0000482;transcript_name=HG00642_ch_T0000482;gene_name=ENSG00000223422;ID=exon:HG00642_ch_T0000482:4;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7370070	7371879	.	-	.	source_gene_common_name=TSPY12P;source_gene=ENSG00000236435.1;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;gene_id=HG00642_ch_G0000128;gene_biotype=unprocessed_pseudogene;gene_name=TSPY12P;gene_sources=liftoff;ID=HG00642_ch_G0000128;Name=TSPY12P
HG00642_chrY	CAT	transcript	7370070	7371879	1000	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_G0000128;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=HG00642_ch_T0000483;Name=TSPY12P
HG00642_chrY	CAT	exon	7370070	7370134	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=exon:HG00642_ch_T0000483:0;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7370135	7370227	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=intron:HG00642_ch_T0000483:0;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7370228	7370373	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=exon:HG00642_ch_T0000483:1;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7370374	7370471	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=intron:HG00642_ch_T0000483:1;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7370472	7370582	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=exon:HG00642_ch_T0000483:2;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7370583	7370713	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=intron:HG00642_ch_T0000483:2;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7370714	7370787	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=exon:HG00642_ch_T0000483:3;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7370788	7371407	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=intron:HG00642_ch_T0000483:3;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7371408	7371879	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00642_ch_T0000483;gene_id=HG00642_ch_G0000128;Parent=HG00642_ch_T0000483;transcript_name=HG00642_ch_T0000483;gene_name=TSPY12P;ID=exon:HG00642_ch_T0000483:4;Name=TSPY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7372842	7375009	.	+	.	source_gene_common_name=ENSG00000236690;source_gene=ENSG00000236690.2;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;gene_id=HG00642_ch_G0000129;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236690;gene_sources=liftoff;ID=HG00642_ch_G0000129;Name=ENSG00000236690
HG00642_chrY	CAT	transcript	7372842	7375009	1000	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_G0000129;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=HG00642_ch_T0000484;Name=ENSG00000236690
HG00642_chrY	CAT	exon	7372842	7373168	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=exon:HG00642_ch_T0000484:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7373169	7374490	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=intron:HG00642_ch_T0000484:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7374491	7374608	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=exon:HG00642_ch_T0000484:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7374609	7374694	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=intron:HG00642_ch_T0000484:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7374695	7374864	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=exon:HG00642_ch_T0000484:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7374865	7374962	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=intron:HG00642_ch_T0000484:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7374963	7375009	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00642_ch_T0000484;gene_id=HG00642_ch_G0000129;Parent=HG00642_ch_T0000484;transcript_name=HG00642_ch_T0000484;gene_name=ENSG00000236690;ID=exon:HG00642_ch_T0000484:3;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7377038	7495959	.	-	.	source_gene_common_name=TTTY16;source_gene=ENSG00000290323.2;gene_id=HG00642_ch_G0000130;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG00642_ch_G0000130;Name=TTTY16
HG00642_chrY	CAT	transcript	7377038	7494921	1000	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=HG00642_ch_T0000485;Name=TTTY16
HG00642_chrY	CAT	exon	7377038	7377448	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7377449	7379410	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7379411	7379605	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7379606	7381517	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7381518	7381818	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7381819	7383518	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7383519	7383595	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7383596	7393502	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7393503	7393651	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7393652	7395200	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7395201	7395429	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:5;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7395430	7462174	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:5;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:6;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7494807	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=intron:HG00642_ch_T0000485:6;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7494808	7494921	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000485;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000485;transcript_name=HG00642_ch_T0000485;gene_name=TTTY16;ID=exon:HG00642_ch_T0000485:7;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7377041	7462881	1000	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=HG00642_ch_T0000486;Name=TTTY16
HG00642_chrY	CAT	exon	7377041	7378115	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7378116	7379410	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7379411	7379605	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7379606	7381517	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7381518	7381818	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7381819	7383518	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7383519	7383595	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7383596	7393502	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7393503	7393651	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7393652	7395200	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7395201	7395429	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:5;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7395430	7455587	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:5;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7455588	7455651	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:6;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7455652	7462174	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:6;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:7;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7462738	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=intron:HG00642_ch_T0000486:7;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462739	7462881	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000486;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000486;transcript_name=HG00642_ch_T0000486;gene_name=TTTY16;ID=exon:HG00642_ch_T0000486:8;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7378891	7489365	1000	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=HG00642_ch_T0000487;Name=TTTY16
HG00642_chrY	CAT	exon	7378891	7379605	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000487;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=exon:HG00642_ch_T0000487:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7379606	7462174	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000487;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=intron:HG00642_ch_T0000487:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462361	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000487;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=exon:HG00642_ch_T0000487:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462362	7489251	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000487;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=intron:HG00642_ch_T0000487:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7489252	7489365	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000487;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000487;transcript_name=HG00642_ch_T0000487;gene_name=TTTY16;ID=exon:HG00642_ch_T0000487:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7387195	7455844	1000	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=HG00642_ch_T0000488;Name=TTTY16
HG00642_chrY	CAT	exon	7387195	7387255	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=exon:HG00642_ch_T0000488:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7387256	7393502	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=intron:HG00642_ch_T0000488:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7393503	7393651	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=exon:HG00642_ch_T0000488:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7393652	7395200	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=intron:HG00642_ch_T0000488:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7395201	7395429	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=exon:HG00642_ch_T0000488:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7395430	7455587	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=intron:HG00642_ch_T0000488:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7455588	7455844	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000488;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000488;transcript_name=HG00642_ch_T0000488;gene_name=TTTY16;ID=exon:HG00642_ch_T0000488:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428241	7494855	1000	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=HG00642_ch_T0000490;Name=TTTY16
HG00642_chrY	CAT	exon	7428241	7428681	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000490;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=exon:HG00642_ch_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000490;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=intron:HG00642_ch_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000490;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=exon:HG00642_ch_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7494807	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000490;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=intron:HG00642_ch_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7494808	7494855	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000490;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000490;transcript_name=HG00642_ch_T0000490;gene_name=TTTY16;ID=exon:HG00642_ch_T0000490:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428241	7489575	1000	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=HG00642_ch_T0000491;Name=TTTY16
HG00642_chrY	CAT	exon	7428241	7428681	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000491;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=exon:HG00642_ch_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000491;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=intron:HG00642_ch_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462361	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000491;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=exon:HG00642_ch_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462362	7489468	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000491;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=intron:HG00642_ch_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7489469	7489575	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000491;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000491;transcript_name=HG00642_ch_T0000491;gene_name=TTTY16;ID=exon:HG00642_ch_T0000491:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428243	7489579	1000	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=HG00642_ch_T0000492;Name=TTTY16
HG00642_chrY	CAT	exon	7428243	7428681	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000492;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=exon:HG00642_ch_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000492;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=intron:HG00642_ch_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000492;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=exon:HG00642_ch_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7489468	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000492;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=intron:HG00642_ch_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7489469	7489579	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000492;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000492;transcript_name=HG00642_ch_T0000492;gene_name=TTTY16;ID=exon:HG00642_ch_T0000492:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428249	7489506	1000	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=HG00642_ch_T0000493;Name=TTTY16
HG00642_chrY	CAT	exon	7428249	7428681	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=exon:HG00642_ch_T0000493:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7455587	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=intron:HG00642_ch_T0000493:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7455588	7455647	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=exon:HG00642_ch_T0000493:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7455648	7462174	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=intron:HG00642_ch_T0000493:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=exon:HG00642_ch_T0000493:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7489468	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=intron:HG00642_ch_T0000493:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7489469	7489506	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000493;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000493;transcript_name=HG00642_ch_T0000493;gene_name=TTTY16;ID=exon:HG00642_ch_T0000493:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428249	7462895	1000	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=HG00642_ch_T0000494;Name=TTTY16
HG00642_chrY	CAT	exon	7428249	7428681	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000494;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=exon:HG00642_ch_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000494;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=intron:HG00642_ch_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000494;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=exon:HG00642_ch_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7462738	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000494;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=intron:HG00642_ch_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462739	7462895	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000494;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000494;transcript_name=HG00642_ch_T0000494;gene_name=TTTY16;ID=exon:HG00642_ch_T0000494:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428249	7455901	1000	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000495;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000495;gene_name=TTTY16;ID=HG00642_ch_T0000495;Name=TTTY16
HG00642_chrY	CAT	exon	7428249	7428681	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000495;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000495;transcript_name=HG00642_ch_T0000495;gene_name=TTTY16;ID=exon:HG00642_ch_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7455587	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000495;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000495;transcript_name=HG00642_ch_T0000495;gene_name=TTTY16;ID=intron:HG00642_ch_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7455588	7455901	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000495;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000495;transcript_name=HG00642_ch_T0000495;gene_name=TTTY16;ID=exon:HG00642_ch_T0000495:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428249	7489463	1000	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=HG00642_ch_T0000496;Name=TTTY16
HG00642_chrY	CAT	exon	7428249	7428681	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000496;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=exon:HG00642_ch_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000496;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=intron:HG00642_ch_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462361	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000496;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=exon:HG00642_ch_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462362	7489251	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000496;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=intron:HG00642_ch_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7489252	7489463	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000496;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000496;transcript_name=HG00642_ch_T0000496;gene_name=TTTY16;ID=exon:HG00642_ch_T0000496:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428249	7494915	1000	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=HG00642_ch_T0000497;Name=TTTY16
HG00642_chrY	CAT	exon	7428249	7428681	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=exon:HG00642_ch_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=intron:HG00642_ch_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462361	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=exon:HG00642_ch_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462362	7462487	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=intron:HG00642_ch_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462488	7462682	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=exon:HG00642_ch_T0000497:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462683	7491148	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=intron:HG00642_ch_T0000497:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7491149	7491258	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=exon:HG00642_ch_T0000497:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7491259	7494807	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=intron:HG00642_ch_T0000497:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7494808	7494915	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000497;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000497;transcript_name=HG00642_ch_T0000497;gene_name=TTTY16;ID=exon:HG00642_ch_T0000497:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7428253	7495959	1000	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_G0000130;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=HG00642_ch_T0000498;Name=TTTY16
HG00642_chrY	CAT	exon	7428253	7428681	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=exon:HG00642_ch_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7428682	7462174	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=intron:HG00642_ch_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462358	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=exon:HG00642_ch_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7462359	7491148	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=intron:HG00642_ch_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7491149	7491258	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=exon:HG00642_ch_T0000498:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7491259	7494807	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=intron:HG00642_ch_T0000498:2;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7494808	7494896	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=exon:HG00642_ch_T0000498:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7494897	7495132	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=intron:HG00642_ch_T0000498:3;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7495133	7495959	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00642_ch_T0000498;gene_id=HG00642_ch_G0000130;Parent=HG00642_ch_T0000498;transcript_name=HG00642_ch_T0000498;gene_name=TTTY16;ID=exon:HG00642_ch_T0000498:4;Name=TTTY16;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7395317	7462361	.	-	.	source_gene_common_name=RFTN1P1;source_gene=ENSG00000234795.11;gene_id=HG00642_ch_G0000131;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RFTN1P1;gene_sources=liftoff;ID=HG00642_ch_G0000131;Name=RFTN1P1
HG00642_chrY	CAT	transcript	7395317	7462361	1000	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_G0000131;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=HG00642_ch_T0000489;Name=RFTN1P1
HG00642_chrY	CAT	exon	7395317	7395429	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=exon:HG00642_ch_T0000489:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7395430	7407513	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=intron:HG00642_ch_T0000489:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7407514	7407716	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=exon:HG00642_ch_T0000489:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7407717	7415114	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=intron:HG00642_ch_T0000489:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7415115	7415498	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=exon:HG00642_ch_T0000489:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7415499	7435016	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=intron:HG00642_ch_T0000489:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7435017	7435125	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=exon:HG00642_ch_T0000489:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7435126	7462174	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=intron:HG00642_ch_T0000489:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7462175	7462361	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00642_ch_T0000489;gene_id=HG00642_ch_G0000131;Parent=HG00642_ch_T0000489;transcript_name=HG00642_ch_T0000489;gene_name=RFTN1P1;ID=exon:HG00642_ch_T0000489:4;Name=RFTN1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7472989	7476680	.	+	.	source_gene_common_name=ENSG00000298447;source_gene=ENSG00000298447.1;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;gene_id=HG00642_ch_G0000132;gene_biotype=lncRNA;gene_name=ENSG00000298447;gene_sources=liftoff;ID=HG00642_ch_G0000132;Name=ENSG00000298447
HG00642_chrY	CAT	transcript	7472989	7476680	1000	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00642_ch_T0000499;gene_id=HG00642_ch_G0000132;Parent=HG00642_ch_G0000132;transcript_name=HG00642_ch_T0000499;gene_name=ENSG00000298447;ID=HG00642_ch_T0000499;Name=ENSG00000298447
HG00642_chrY	CAT	exon	7472989	7473283	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00642_ch_T0000499;gene_id=HG00642_ch_G0000132;Parent=HG00642_ch_T0000499;transcript_name=HG00642_ch_T0000499;gene_name=ENSG00000298447;ID=exon:HG00642_ch_T0000499:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7473284	7475933	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00642_ch_T0000499;gene_id=HG00642_ch_G0000132;Parent=HG00642_ch_T0000499;transcript_name=HG00642_ch_T0000499;gene_name=ENSG00000298447;ID=intron:HG00642_ch_T0000499:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7475934	7476680	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00642_ch_T0000499;gene_id=HG00642_ch_G0000132;Parent=HG00642_ch_T0000499;transcript_name=HG00642_ch_T0000499;gene_name=ENSG00000298447;ID=exon:HG00642_ch_T0000499:1;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7489650	7500338	.	+	.	source_gene_common_name=TTTY12;source_gene=ENSG00000237048.5;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;gene_id=HG00642_ch_G0000133;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG00642_ch_G0000133;Name=TTTY12
HG00642_chrY	CAT	transcript	7489650	7496337	1000	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_G0000133;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=HG00642_ch_T0000500;Name=TTTY12
HG00642_chrY	CAT	exon	7489650	7489716	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000500;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=exon:HG00642_ch_T0000500:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7489717	7490577	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000500;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=intron:HG00642_ch_T0000500:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7490578	7490733	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000500;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=exon:HG00642_ch_T0000500:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7490734	7495514	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000500;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=intron:HG00642_ch_T0000500:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7495515	7496337	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00642_ch_T0000500;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000500;transcript_name=HG00642_ch_T0000500;gene_name=TTTY12;ID=exon:HG00642_ch_T0000500:2;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7489655	7496337	1000	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_G0000133;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=HG00642_ch_T0000501;Name=TTTY12
HG00642_chrY	CAT	exon	7489655	7489716	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=exon:HG00642_ch_T0000501:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7489717	7490577	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=intron:HG00642_ch_T0000501:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7490578	7490733	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=exon:HG00642_ch_T0000501:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7490734	7491197	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=intron:HG00642_ch_T0000501:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7491198	7491279	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=exon:HG00642_ch_T0000501:2;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7491280	7495514	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=intron:HG00642_ch_T0000501:2;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7495515	7496337	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00642_ch_T0000501;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000501;transcript_name=HG00642_ch_T0000501;gene_name=TTTY12;ID=exon:HG00642_ch_T0000501:3;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7489655	7500338	1000	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_G0000133;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=HG00642_ch_T0000502;Name=TTTY12
HG00642_chrY	CAT	exon	7489655	7489716	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000502;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=exon:HG00642_ch_T0000502:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7489717	7490577	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000502;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=intron:HG00642_ch_T0000502:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7490578	7490733	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000502;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=exon:HG00642_ch_T0000502:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7490734	7500232	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000502;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=intron:HG00642_ch_T0000502:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7500233	7500338	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00642_ch_T0000502;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000502;transcript_name=HG00642_ch_T0000502;gene_name=TTTY12;ID=exon:HG00642_ch_T0000502:2;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7490576	7496337	1000	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_G0000133;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=HG00642_ch_T0000503;Name=TTTY12
HG00642_chrY	CAT	exon	7490576	7490733	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000503;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=exon:HG00642_ch_T0000503:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7490734	7491197	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000503;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=intron:HG00642_ch_T0000503:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7491198	7491279	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000503;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=exon:HG00642_ch_T0000503:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7491280	7496185	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000503;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=intron:HG00642_ch_T0000503:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7496186	7496337	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00642_ch_T0000503;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000503;transcript_name=HG00642_ch_T0000503;gene_name=TTTY12;ID=exon:HG00642_ch_T0000503:2;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7493467	7496337	1000	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00642_ch_T0000504;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_G0000133;transcript_name=HG00642_ch_T0000504;gene_name=TTTY12;ID=HG00642_ch_T0000504;Name=TTTY12
HG00642_chrY	CAT	exon	7493467	7493509	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00642_ch_T0000504;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000504;transcript_name=HG00642_ch_T0000504;gene_name=TTTY12;ID=exon:HG00642_ch_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7493510	7495514	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00642_ch_T0000504;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000504;transcript_name=HG00642_ch_T0000504;gene_name=TTTY12;ID=intron:HG00642_ch_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7495515	7496337	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00642_ch_T0000504;gene_id=HG00642_ch_G0000133;Parent=HG00642_ch_T0000504;transcript_name=HG00642_ch_T0000504;gene_name=TTTY12;ID=exon:HG00642_ch_T0000504:1;Name=TTTY12;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7531139	7532108	.	-	.	source_gene_common_name=ENSG00000278854;source_gene=ENSG00000278854.1;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;gene_id=HG00642_ch_G0000134;gene_biotype=processed_pseudogene;gene_name=ENSG00000278854;gene_sources=liftoff;ID=HG00642_ch_G0000134;Name=ENSG00000278854
HG00642_chrY	CAT	transcript	7531139	7532108	1000	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00642_ch_T0000505;gene_id=HG00642_ch_G0000134;Parent=HG00642_ch_G0000134;transcript_name=HG00642_ch_T0000505;gene_name=ENSG00000278854;ID=HG00642_ch_T0000505;Name=ENSG00000278854
HG00642_chrY	CAT	exon	7531139	7531535	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00642_ch_T0000505;gene_id=HG00642_ch_G0000134;Parent=HG00642_ch_T0000505;transcript_name=HG00642_ch_T0000505;gene_name=ENSG00000278854;ID=exon:HG00642_ch_T0000505:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7531536	7531834	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00642_ch_T0000505;gene_id=HG00642_ch_G0000134;Parent=HG00642_ch_T0000505;transcript_name=HG00642_ch_T0000505;gene_name=ENSG00000278854;ID=intron:HG00642_ch_T0000505:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7531835	7532108	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00642_ch_T0000505;gene_id=HG00642_ch_G0000134;Parent=HG00642_ch_T0000505;transcript_name=HG00642_ch_T0000505;gene_name=ENSG00000278854;ID=exon:HG00642_ch_T0000505:1;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7539341	7540531	.	-	.	source_gene_common_name=ZNF92P1Y;source_gene=ENSG00000215603.4;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;gene_id=HG00642_ch_G0000135;gene_biotype=processed_pseudogene;gene_name=ZNF92P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000135;Name=ZNF92P1Y
HG00642_chrY	CAT	transcript	7539341	7540531	1000	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG00642_ch_T0000506;gene_id=HG00642_ch_G0000135;Parent=HG00642_ch_G0000135;transcript_name=HG00642_ch_T0000506;gene_name=ZNF92P1Y;ID=HG00642_ch_T0000506;Name=ZNF92P1Y
HG00642_chrY	CAT	exon	7539341	7540531	.	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG00642_ch_T0000506;gene_id=HG00642_ch_G0000135;Parent=HG00642_ch_T0000506;transcript_name=HG00642_ch_T0000506;gene_name=ZNF92P1Y;ID=exon:HG00642_ch_T0000506:0;Name=ZNF92P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7591190	7592957	.	-	.	source_gene_common_name=ENSG00000273863;source_gene=ENSG00000273863.1;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;gene_id=HG00642_ch_G0000136;gene_biotype=processed_pseudogene;gene_name=ENSG00000273863;gene_sources=liftoff;ID=HG00642_ch_G0000136;Name=ENSG00000273863
HG00642_chrY	CAT	transcript	7591190	7592957	1000	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00642_ch_T0000507;gene_id=HG00642_ch_G0000136;Parent=HG00642_ch_G0000136;transcript_name=HG00642_ch_T0000507;gene_name=ENSG00000273863;ID=HG00642_ch_T0000507;Name=ENSG00000273863
HG00642_chrY	CAT	exon	7591190	7591712	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00642_ch_T0000507;gene_id=HG00642_ch_G0000136;Parent=HG00642_ch_T0000507;transcript_name=HG00642_ch_T0000507;gene_name=ENSG00000273863;ID=exon:HG00642_ch_T0000507:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7591713	7592767	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00642_ch_T0000507;gene_id=HG00642_ch_G0000136;Parent=HG00642_ch_T0000507;transcript_name=HG00642_ch_T0000507;gene_name=ENSG00000273863;ID=intron:HG00642_ch_T0000507:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7592768	7592957	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00642_ch_T0000507;gene_id=HG00642_ch_G0000136;Parent=HG00642_ch_T0000507;transcript_name=HG00642_ch_T0000507;gene_name=ENSG00000273863;ID=exon:HG00642_ch_T0000507:1;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7599076	7599744	.	-	.	source_gene_common_name=ZNF736P8Y;source_gene=ENSG00000244246.1;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;gene_id=HG00642_ch_G0000137;gene_biotype=processed_pseudogene;gene_name=ZNF736P8Y;gene_sources=liftoff;ID=HG00642_ch_G0000137;Name=ZNF736P8Y
HG00642_chrY	CAT	transcript	7599076	7599744	1000	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG00642_ch_T0000508;gene_id=HG00642_ch_G0000137;Parent=HG00642_ch_G0000137;transcript_name=HG00642_ch_T0000508;gene_name=ZNF736P8Y;ID=HG00642_ch_T0000508;Name=ZNF736P8Y
HG00642_chrY	CAT	exon	7599076	7599744	.	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG00642_ch_T0000508;gene_id=HG00642_ch_G0000137;Parent=HG00642_ch_T0000508;transcript_name=HG00642_ch_T0000508;gene_name=ZNF736P8Y;ID=exon:HG00642_ch_T0000508:0;Name=ZNF736P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7618651	7623294	.	-	.	source_gene_common_name=BPY2DP;source_gene=ENSG00000229745.1;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;gene_id=HG00642_ch_G0000138;gene_biotype=unprocessed_pseudogene;gene_name=BPY2DP;gene_sources=liftoff;ID=HG00642_ch_G0000138;Name=BPY2DP
HG00642_chrY	CAT	transcript	7618651	7623294	1000	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_G0000138;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=HG00642_ch_T0000509;Name=BPY2DP
HG00642_chrY	CAT	exon	7618651	7618669	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=exon:HG00642_ch_T0000509:0;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7618670	7619347	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=intron:HG00642_ch_T0000509:0;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7619348	7619453	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=exon:HG00642_ch_T0000509:1;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7619454	7622288	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=intron:HG00642_ch_T0000509:1;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7622289	7622358	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=exon:HG00642_ch_T0000509:2;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7622359	7623224	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=intron:HG00642_ch_T0000509:2;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7623225	7623294	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00642_ch_T0000509;gene_id=HG00642_ch_G0000138;Parent=HG00642_ch_T0000509;transcript_name=HG00642_ch_T0000509;gene_name=BPY2DP;ID=exon:HG00642_ch_T0000509:3;Name=BPY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7676637	7677456	.	-	.	source_gene_common_name=ZNF736P7Y;source_gene=ENSG00000241200.1;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;gene_id=HG00642_ch_G0000139;gene_biotype=processed_pseudogene;gene_name=ZNF736P7Y;gene_sources=liftoff;ID=HG00642_ch_G0000139;Name=ZNF736P7Y
HG00642_chrY	CAT	transcript	7676637	7677456	1000	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG00642_ch_T0000510;gene_id=HG00642_ch_G0000139;Parent=HG00642_ch_G0000139;transcript_name=HG00642_ch_T0000510;gene_name=ZNF736P7Y;ID=HG00642_ch_T0000510;Name=ZNF736P7Y
HG00642_chrY	CAT	exon	7676637	7677456	.	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG00642_ch_T0000510;gene_id=HG00642_ch_G0000139;Parent=HG00642_ch_T0000510;transcript_name=HG00642_ch_T0000510;gene_name=ZNF736P7Y;ID=exon:HG00642_ch_T0000510:0;Name=ZNF736P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7754089	7811937	.	-	.	source_gene_common_name=ENSG00000293305;source_gene=ENSG00000293305.2;gene_id=HG00642_ch_G0000140;gene_biotype=lncRNA;gene_name=ENSG00000293305;gene_sources=liftoff;ID=HG00642_ch_G0000140;Name=ENSG00000293305
HG00642_chrY	CAT	transcript	7754089	7811937	1000	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=HG00642_ch_T0000511;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7754089	7755761	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000511:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762633	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000511:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762634	7762818	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000511:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7797493	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000511:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7797494	7797608	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000511:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7797609	7811727	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000511:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811728	7811937	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000511;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000511;transcript_name=HG00642_ch_T0000511;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000511:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755516	7811936	1000	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=HG00642_ch_T0000513;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755516	7755761	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000513;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000513:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7797493	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000513;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000513:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7797494	7797608	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000513;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000513:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7797609	7811701	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000513;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000513:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811702	7811936	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000513;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000513;transcript_name=HG00642_ch_T0000513;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000513:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755521	7811978	1000	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=HG00642_ch_T0000514;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755521	7755761	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000514:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762633	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000514:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762634	7762818	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000514:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7797493	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000514:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7797494	7797608	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000514:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7797609	7811701	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000514:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811702	7811978	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000514;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000514;transcript_name=HG00642_ch_T0000514;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000514:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755521	7811887	1000	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=HG00642_ch_T0000515;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755521	7755761	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000515;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762633	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000515;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762634	7762818	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000515;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7811701	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000515;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811702	7811887	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000515;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000515;transcript_name=HG00642_ch_T0000515;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000515:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755521	7777715	1000	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=HG00642_ch_T0000516;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755521	7755761	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000516;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000516:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762695	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000516;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000516:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762696	7762818	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000516;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000516:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7777676	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000516;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000516:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7777677	7777715	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000516;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000516;transcript_name=HG00642_ch_T0000516;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000516:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755521	7811925	1000	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000517;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000517;gene_name=ENSG00000293305;ID=HG00642_ch_T0000517;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755521	7755761	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000517;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000517;transcript_name=HG00642_ch_T0000517;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7811701	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000517;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000517;transcript_name=HG00642_ch_T0000517;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811702	7811925	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000517;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000517;transcript_name=HG00642_ch_T0000517;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000517:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755524	7777713	1000	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=HG00642_ch_T0000518;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755524	7755761	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000518;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762633	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000518;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762634	7762818	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000518;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7777676	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000518;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7777677	7777713	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000518;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000518;transcript_name=HG00642_ch_T0000518;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000518:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755525	7811887	1000	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=HG00642_ch_T0000519;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755525	7755761	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000519;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762695	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000519;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762696	7762818	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000519;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000519:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7811701	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000519;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000519:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7811702	7811887	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000519;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000519;transcript_name=HG00642_ch_T0000519;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000519:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7755525	7777769	1000	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_G0000140;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=HG00642_ch_T0000520;Name=ENSG00000293305
HG00642_chrY	CAT	exon	7755525	7755761	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755762	7762633	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7762634	7762818	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7762819	7777241	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7777242	7777392	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000520:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7777393	7777676	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=intron:HG00642_ch_T0000520:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7777677	7777769	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00642_ch_T0000520;gene_id=HG00642_ch_G0000140;Parent=HG00642_ch_T0000520;transcript_name=HG00642_ch_T0000520;gene_name=ENSG00000293305;ID=exon:HG00642_ch_T0000520:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7754540	7756367	.	-	.	source_gene_common_name=ZNF736P9Y;source_gene=ENSG00000239893.4;gene_id=HG00642_ch_G0000141;gene_biotype=transcribed_processed_pseudogene;gene_name=ZNF736P9Y;gene_sources=liftoff;ID=HG00642_ch_G0000141;Name=ZNF736P9Y
HG00642_chrY	CAT	transcript	7754540	7756367	1000	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00642_ch_T0000512;gene_id=HG00642_ch_G0000141;Parent=HG00642_ch_G0000141;transcript_name=HG00642_ch_T0000512;gene_name=ZNF736P9Y;ID=HG00642_ch_T0000512;Name=ZNF736P9Y
HG00642_chrY	CAT	exon	7754540	7755762	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00642_ch_T0000512;gene_id=HG00642_ch_G0000141;Parent=HG00642_ch_T0000512;transcript_name=HG00642_ch_T0000512;gene_name=ZNF736P9Y;ID=exon:HG00642_ch_T0000512:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7755763	7756245	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00642_ch_T0000512;gene_id=HG00642_ch_G0000141;Parent=HG00642_ch_T0000512;transcript_name=HG00642_ch_T0000512;gene_name=ZNF736P9Y;ID=intron:HG00642_ch_T0000512:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7756246	7756367	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00642_ch_T0000512;gene_id=HG00642_ch_G0000141;Parent=HG00642_ch_T0000512;transcript_name=HG00642_ch_T0000512;gene_name=ZNF736P9Y;ID=exon:HG00642_ch_T0000512:1;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7812774	7829847	.	+	.	source_gene_common_name=RBMY2JP;source_gene=ENSG00000227204.1;gene_id=HG00642_ch_G0000142;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2JP;gene_sources=liftoff;ID=HG00642_ch_G0000142;Name=RBMY2JP
HG00642_chrY	CAT	transcript	7812774	7829847	1000	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_G0000142;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=HG00642_ch_T0000521;Name=RBMY2JP
HG00642_chrY	CAT	exon	7812774	7812882	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7812883	7814876	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7814877	7814879	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7814880	7817291	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7817292	7817469	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7817470	7819328	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7819329	7819444	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7819445	7819769	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7819770	7819806	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7819807	7827869	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7827870	7827982	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7827983	7828851	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7828852	7828958	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7828959	7829037	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7829038	7829131	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7829132	7829545	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=intron:HG00642_ch_T0000521:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7829546	7829847	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00642_ch_T0000521;gene_id=HG00642_ch_G0000142;Parent=HG00642_ch_T0000521;transcript_name=HG00642_ch_T0000521;gene_name=RBMY2JP;ID=exon:HG00642_ch_T0000521:8;Name=RBMY2JP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7814083	7829358	.	+	.	source_gene_common_name=ENSG00000299821;source_gene=ENSG00000299821.1;gene_id=HG00642_ch_G0000143;gene_biotype=lncRNA;gene_name=ENSG00000299821;gene_sources=liftoff;ID=HG00642_ch_G0000143;Name=ENSG00000299821
HG00642_chrY	CAT	transcript	7814083	7829358	1000	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_G0000143;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=HG00642_ch_T0000522;Name=ENSG00000299821
HG00642_chrY	CAT	exon	7814083	7814732	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_T0000522;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=exon:HG00642_ch_T0000522:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7814733	7826443	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_T0000522;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=intron:HG00642_ch_T0000522:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7826444	7826604	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_T0000522;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=exon:HG00642_ch_T0000522:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7826605	7829042	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_T0000522;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=intron:HG00642_ch_T0000522:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7829043	7829358	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00642_ch_T0000522;gene_id=HG00642_ch_G0000143;Parent=HG00642_ch_T0000522;transcript_name=HG00642_ch_T0000522;gene_name=ENSG00000299821;ID=exon:HG00642_ch_T0000522:2;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7827825	7837304	.	-	.	source_gene_common_name=ENSG00000299844;source_gene=ENSG00000299844.1;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;gene_id=HG00642_ch_G0000144;gene_biotype=lncRNA;gene_name=ENSG00000299844;gene_sources=liftoff;ID=HG00642_ch_G0000144;Name=ENSG00000299844
HG00642_chrY	CAT	transcript	7827825	7837304	1000	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_G0000144;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=HG00642_ch_T0000523;Name=ENSG00000299844
HG00642_chrY	CAT	exon	7827825	7827972	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_T0000523;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=exon:HG00642_ch_T0000523:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7827973	7829872	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_T0000523;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=intron:HG00642_ch_T0000523:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7829873	7829980	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_T0000523;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=exon:HG00642_ch_T0000523:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7829981	7837239	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_T0000523;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=intron:HG00642_ch_T0000523:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7837240	7837304	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00642_ch_T0000523;gene_id=HG00642_ch_G0000144;Parent=HG00642_ch_T0000523;transcript_name=HG00642_ch_T0000523;gene_name=ENSG00000299844;ID=exon:HG00642_ch_T0000523:2;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7950108	7962847	.	-	.	source_gene_common_name=RBMY2KP;source_gene=ENSG00000225809.1;alternative_source_transcripts=ENST00000418221.1;gene_id=HG00642_ch_G0000145;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2KP;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000145;Name=RBMY2KP
HG00642_chrY	CAT	transcript	7950108	7962847	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_G0000145;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=HG00642_ch_T0000524;Name=RBMY2KP
HG00642_chrY	CAT	exon	7950108	7950424	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7950425	7950833	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000524:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7950834	7951103	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7951104	7951973	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000524:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7951974	7952088	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7952089	7956938	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000524:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7956939	7957088	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7957089	7962212	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000524:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7962213	7962315	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7962316	7962739	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000524:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7962740	7962847	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00642_ch_T0000524;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000524;transcript_name=HG00642_ch_T0000524;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000524:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	7950108	7962847	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_G0000145;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=HG00642_ch_T0000525;Name=RBMY2KP
HG00642_chrY	CAT	exon	7950108	7950424	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7950425	7950833	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7950834	7950921	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7950922	7950992	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7950993	7951103	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7951104	7951973	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7951974	7952088	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7952089	7956938	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7956939	7957088	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7957089	7962212	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7962213	7962315	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7962316	7962739	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=intron:HG00642_ch_T0000525:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7962740	7962847	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00642_ch_T0000525;gene_id=HG00642_ch_G0000145;Parent=HG00642_ch_T0000525;transcript_name=HG00642_ch_T0000525;gene_name=RBMY2KP;ID=exon:HG00642_ch_T0000525:6;Name=RBMY2KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	7965857	7967868	.	+	.	source_gene_common_name=TSPY24P;source_gene=ENSG00000215601.3;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;gene_id=HG00642_ch_G0000146;gene_biotype=unprocessed_pseudogene;gene_name=TSPY24P;gene_sources=liftoff;ID=HG00642_ch_G0000146;Name=TSPY24P
HG00642_chrY	CAT	transcript	7965857	7967868	1000	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_G0000146;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=HG00642_ch_T0000526;Name=TSPY24P
HG00642_chrY	CAT	exon	7965857	7965994	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=exon:HG00642_ch_T0000526:0;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7965995	7967359	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=intron:HG00642_ch_T0000526:0;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7967360	7967469	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=exon:HG00642_ch_T0000526:1;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7967470	7967555	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=intron:HG00642_ch_T0000526:1;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7967556	7967701	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=exon:HG00642_ch_T0000526:2;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	7967702	7967819	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=intron:HG00642_ch_T0000526:2;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	7967820	7967868	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00642_ch_T0000526;gene_id=HG00642_ch_G0000146;Parent=HG00642_ch_T0000526;transcript_name=HG00642_ch_T0000526;gene_name=TSPY24P;ID=exon:HG00642_ch_T0000526:3;Name=TSPY24P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8036565	8037777	.	+	.	source_gene_common_name=ZNF736P6Y;source_gene=ENSG00000224634.1;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;gene_id=HG00642_ch_G0000147;gene_biotype=processed_pseudogene;gene_name=ZNF736P6Y;gene_sources=liftoff;ID=HG00642_ch_G0000147;Name=ZNF736P6Y
HG00642_chrY	CAT	transcript	8036565	8037777	1000	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG00642_ch_T0000527;gene_id=HG00642_ch_G0000147;Parent=HG00642_ch_G0000147;transcript_name=HG00642_ch_T0000527;gene_name=ZNF736P6Y;ID=HG00642_ch_T0000527;Name=ZNF736P6Y
HG00642_chrY	CAT	exon	8036565	8037777	.	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG00642_ch_T0000527;gene_id=HG00642_ch_G0000147;Parent=HG00642_ch_T0000527;transcript_name=HG00642_ch_T0000527;gene_name=ZNF736P6Y;ID=exon:HG00642_ch_T0000527:0;Name=ZNF736P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8049169	8049592	.	-	.	source_gene_common_name=MTND6P1;source_gene=ENSG00000223955.1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;gene_id=HG00642_ch_G0000148;gene_biotype=processed_pseudogene;gene_name=MTND6P1;gene_sources=liftoff;ID=HG00642_ch_G0000148;Name=MTND6P1
HG00642_chrY	CAT	transcript	8049169	8049592	1000	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG00642_ch_T0000528;gene_id=HG00642_ch_G0000148;Parent=HG00642_ch_G0000148;transcript_name=HG00642_ch_T0000528;gene_name=MTND6P1;ID=HG00642_ch_T0000528;Name=MTND6P1
HG00642_chrY	CAT	exon	8049169	8049592	.	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG00642_ch_T0000528;gene_id=HG00642_ch_G0000148;Parent=HG00642_ch_T0000528;transcript_name=HG00642_ch_T0000528;gene_name=MTND6P1;ID=exon:HG00642_ch_T0000528:0;Name=MTND6P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8049665	8050775	.	+	.	source_gene_common_name=MTCYBP1;source_gene=ENSG00000234179.1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;gene_id=HG00642_ch_G0000149;gene_biotype=processed_pseudogene;gene_name=MTCYBP1;gene_sources=liftoff;ID=HG00642_ch_G0000149;Name=MTCYBP1
HG00642_chrY	CAT	transcript	8049665	8050775	1000	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG00642_ch_T0000529;gene_id=HG00642_ch_G0000149;Parent=HG00642_ch_G0000149;transcript_name=HG00642_ch_T0000529;gene_name=MTCYBP1;ID=HG00642_ch_T0000529;Name=MTCYBP1
HG00642_chrY	CAT	exon	8049665	8050775	.	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG00642_ch_T0000529;gene_id=HG00642_ch_G0000149;Parent=HG00642_ch_T0000529;transcript_name=HG00642_ch_T0000529;gene_name=MTCYBP1;ID=exon:HG00642_ch_T0000529:0;Name=MTCYBP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8057288	8057655	.	+	.	source_gene_common_name=MTND1P1;source_gene=ENSG00000226529.1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;gene_id=HG00642_ch_G0000150;gene_biotype=processed_pseudogene;gene_name=MTND1P1;gene_sources=liftoff;ID=HG00642_ch_G0000150;Name=MTND1P1
HG00642_chrY	CAT	transcript	8057288	8057655	1000	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG00642_ch_T0000530;gene_id=HG00642_ch_G0000150;Parent=HG00642_ch_G0000150;transcript_name=HG00642_ch_T0000530;gene_name=MTND1P1;ID=HG00642_ch_T0000530;Name=MTND1P1
HG00642_chrY	CAT	exon	8057288	8057655	.	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG00642_ch_T0000530;gene_id=HG00642_ch_G0000150;Parent=HG00642_ch_T0000530;transcript_name=HG00642_ch_T0000530;gene_name=MTND1P1;ID=exon:HG00642_ch_T0000530:0;Name=MTND1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8057866	8058335	.	+	.	source_gene_common_name=MTND2P3;source_gene=ENSG00000234850.1;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;gene_id=HG00642_ch_G0000151;gene_biotype=processed_pseudogene;gene_name=MTND2P3;gene_sources=liftoff;ID=HG00642_ch_G0000151;Name=MTND2P3
HG00642_chrY	CAT	transcript	8057866	8058335	1000	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG00642_ch_T0000531;gene_id=HG00642_ch_G0000151;Parent=HG00642_ch_G0000151;transcript_name=HG00642_ch_T0000531;gene_name=MTND2P3;ID=HG00642_ch_T0000531;Name=MTND2P3
HG00642_chrY	CAT	exon	8057866	8058335	.	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG00642_ch_T0000531;gene_id=HG00642_ch_G0000151;Parent=HG00642_ch_T0000531;transcript_name=HG00642_ch_T0000531;gene_name=MTND2P3;ID=exon:HG00642_ch_T0000531:0;Name=MTND2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8080666	8093025	.	+	.	source_gene_common_name=ENSG00000303338;source_gene=ENSG00000303338.1;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;gene_id=HG00642_ch_G0000152;gene_biotype=lncRNA;gene_name=ENSG00000303338;gene_sources=liftoff;ID=HG00642_ch_G0000152;Name=ENSG00000303338
HG00642_chrY	CAT	transcript	8080666	8088466	1000	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00642_ch_T0000532;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_G0000152;transcript_name=HG00642_ch_T0000532;gene_name=ENSG00000303338;ID=HG00642_ch_T0000532;Name=ENSG00000303338
HG00642_chrY	CAT	exon	8080666	8080757	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00642_ch_T0000532;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000532;transcript_name=HG00642_ch_T0000532;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000532:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8080758	8088351	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00642_ch_T0000532;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000532;transcript_name=HG00642_ch_T0000532;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000532:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8088352	8088466	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00642_ch_T0000532;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000532;transcript_name=HG00642_ch_T0000532;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000532:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8080666	8085955	1000	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00642_ch_T0000533;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_G0000152;transcript_name=HG00642_ch_T0000533;gene_name=ENSG00000303338;ID=HG00642_ch_T0000533;Name=ENSG00000303338
HG00642_chrY	CAT	exon	8080666	8080757	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00642_ch_T0000533;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000533;transcript_name=HG00642_ch_T0000533;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000533:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8080758	8085698	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00642_ch_T0000533;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000533;transcript_name=HG00642_ch_T0000533;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000533:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8085699	8085955	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00642_ch_T0000533;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000533;transcript_name=HG00642_ch_T0000533;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000533:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8080672	8088461	1000	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_G0000152;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=HG00642_ch_T0000534;Name=ENSG00000303338
HG00642_chrY	CAT	exon	8080672	8080757	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000534;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000534:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8080758	8085698	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000534;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000534:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8085699	8085784	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000534;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000534:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8085785	8088351	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000534;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000534:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8088352	8088461	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00642_ch_T0000534;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000534;transcript_name=HG00642_ch_T0000534;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000534:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8080698	8093025	1000	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_G0000152;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=HG00642_ch_T0000535;Name=ENSG00000303338
HG00642_chrY	CAT	exon	8080698	8080757	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000535:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8080758	8088351	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000535:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8088352	8088605	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000535:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8088606	8089306	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000535:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8089307	8089459	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000535:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8089460	8092751	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=intron:HG00642_ch_T0000535:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8092752	8093025	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00642_ch_T0000535;gene_id=HG00642_ch_G0000152;Parent=HG00642_ch_T0000535;transcript_name=HG00642_ch_T0000535;gene_name=ENSG00000303338;ID=exon:HG00642_ch_T0000535:3;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8098662	8099679	.	-	.	source_gene_common_name=TRIM60P3Y;source_gene=ENSG00000227830.1;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;gene_id=HG00642_ch_G0000153;gene_biotype=processed_pseudogene;gene_name=TRIM60P3Y;gene_sources=liftoff;ID=HG00642_ch_G0000153;Name=TRIM60P3Y
HG00642_chrY	CAT	transcript	8098662	8099679	1000	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00642_ch_T0000536;gene_id=HG00642_ch_G0000153;Parent=HG00642_ch_G0000153;transcript_name=HG00642_ch_T0000536;gene_name=TRIM60P3Y;ID=HG00642_ch_T0000536;Name=TRIM60P3Y
HG00642_chrY	CAT	exon	8098662	8099079	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00642_ch_T0000536;gene_id=HG00642_ch_G0000153;Parent=HG00642_ch_T0000536;transcript_name=HG00642_ch_T0000536;gene_name=TRIM60P3Y;ID=exon:HG00642_ch_T0000536:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8099080	8099424	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00642_ch_T0000536;gene_id=HG00642_ch_G0000153;Parent=HG00642_ch_T0000536;transcript_name=HG00642_ch_T0000536;gene_name=TRIM60P3Y;ID=intron:HG00642_ch_T0000536:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8099425	8099679	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00642_ch_T0000536;gene_id=HG00642_ch_G0000153;Parent=HG00642_ch_T0000536;transcript_name=HG00642_ch_T0000536;gene_name=TRIM60P3Y;ID=exon:HG00642_ch_T0000536:1;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8104416	8105525	.	-	.	source_gene_common_name=ZNF736P10Y;source_gene=ENSG00000216824.2;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;gene_id=HG00642_ch_G0000154;gene_biotype=processed_pseudogene;gene_name=ZNF736P10Y;gene_sources=liftoff;ID=HG00642_ch_G0000154;Name=ZNF736P10Y
HG00642_chrY	CAT	transcript	8104416	8105525	1000	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG00642_ch_T0000537;gene_id=HG00642_ch_G0000154;Parent=HG00642_ch_G0000154;transcript_name=HG00642_ch_T0000537;gene_name=ZNF736P10Y;ID=HG00642_ch_T0000537;Name=ZNF736P10Y
HG00642_chrY	CAT	exon	8104416	8105525	.	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG00642_ch_T0000537;gene_id=HG00642_ch_G0000154;Parent=HG00642_ch_T0000537;transcript_name=HG00642_ch_T0000537;gene_name=ZNF736P10Y;ID=exon:HG00642_ch_T0000537:0;Name=ZNF736P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8202979	8203363	.	-	.	source_gene_common_name=ENSG00000275866;source_gene=ENSG00000275866.1;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;gene_id=HG00642_ch_G0000155;gene_biotype=processed_pseudogene;gene_name=ENSG00000275866;gene_sources=liftoff;ID=HG00642_ch_G0000155;Name=ENSG00000275866
HG00642_chrY	CAT	transcript	8202979	8203363	1000	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG00642_ch_T0000538;gene_id=HG00642_ch_G0000155;Parent=HG00642_ch_G0000155;transcript_name=HG00642_ch_T0000538;gene_name=ENSG00000275866;ID=HG00642_ch_T0000538;Name=ENSG00000275866
HG00642_chrY	CAT	exon	8202979	8203363	.	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG00642_ch_T0000538;gene_id=HG00642_ch_G0000155;Parent=HG00642_ch_T0000538;transcript_name=HG00642_ch_T0000538;gene_name=ENSG00000275866;ID=exon:HG00642_ch_T0000538:0;Name=ENSG00000275866;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8236120	8246548	.	+	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=HG00642_ch_G0000156;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG00642_ch_G0000156;Name=LINC00279
HG00642_chrY	CAT	transcript	8236120	8246548	1000	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_G0000156;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=HG00642_ch_T0000539;Name=LINC00279
HG00642_chrY	CAT	exon	8236120	8236231	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_T0000539;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=exon:HG00642_ch_T0000539:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8236232	8245057	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_T0000539;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=intron:HG00642_ch_T0000539:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8245058	8245165	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_T0000539;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=exon:HG00642_ch_T0000539:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8245166	8246016	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_T0000539;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=intron:HG00642_ch_T0000539:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8246017	8246548	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000539;gene_id=HG00642_ch_G0000156;Parent=HG00642_ch_T0000539;transcript_name=HG00642_ch_T0000539;gene_name=LINC00279;ID=exon:HG00642_ch_T0000539:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8269073	8399534	.	+	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=HG00642_ch_G0000157;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG00642_ch_G0000157;Name=LINC00279
HG00642_chrY	CAT	transcript	8269073	8373168	1000	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=HG00642_ch_T0000540;Name=LINC00279
HG00642_chrY	CAT	exon	8269073	8269325	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=exon:HG00642_ch_T0000540:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269326	8364059	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=intron:HG00642_ch_T0000540:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=exon:HG00642_ch_T0000540:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=intron:HG00642_ch_T0000540:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=exon:HG00642_ch_T0000540:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=intron:HG00642_ch_T0000540:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368211	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=exon:HG00642_ch_T0000540:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8368212	8372920	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=intron:HG00642_ch_T0000540:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373168	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000540;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000540;transcript_name=HG00642_ch_T0000540;gene_name=LINC00279;ID=exon:HG00642_ch_T0000540:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269084	8399534	1000	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=HG00642_ch_T0000541;Name=LINC00279
HG00642_chrY	CAT	exon	8269084	8269325	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269326	8364059	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368211	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8368212	8372920	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373124	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8373125	8375905	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8375906	8376067	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:5;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8376068	8378738	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:5;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8378739	8378934	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:6;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8378935	8383467	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:6;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8383468	8383629	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:7;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8383630	8385782	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:7;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8385783	8385944	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:8;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8385945	8390811	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:8;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8390812	8390973	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:9;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8390974	8395807	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:9;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8395808	8395969	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:10;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8395970	8398962	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=intron:HG00642_ch_T0000541:10;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8398963	8399534	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000541;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000541;transcript_name=HG00642_ch_T0000541;gene_name=LINC00279;ID=exon:HG00642_ch_T0000541:11;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269101	8281685	1000	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000542;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000542;gene_name=LINC00279;ID=HG00642_ch_T0000542;Name=LINC00279
HG00642_chrY	CAT	exon	8269101	8269331	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000542;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000542;transcript_name=HG00642_ch_T0000542;gene_name=LINC00279;ID=exon:HG00642_ch_T0000542:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269332	8280820	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000542;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000542;transcript_name=HG00642_ch_T0000542;gene_name=LINC00279;ID=intron:HG00642_ch_T0000542:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8280821	8281685	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000542;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000542;transcript_name=HG00642_ch_T0000542;gene_name=LINC00279;ID=exon:HG00642_ch_T0000542:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269112	8336199	1000	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=HG00642_ch_T0000543;Name=LINC00279
HG00642_chrY	CAT	exon	8269112	8269331	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000543;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=exon:HG00642_ch_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269332	8335138	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000543;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=intron:HG00642_ch_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8335139	8335288	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000543;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=exon:HG00642_ch_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8335289	8335864	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000543;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=intron:HG00642_ch_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8335865	8336199	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000543;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000543;transcript_name=HG00642_ch_T0000543;gene_name=LINC00279;ID=exon:HG00642_ch_T0000543:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269131	8380547	1000	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=HG00642_ch_T0000544;Name=LINC00279
HG00642_chrY	CAT	exon	8269131	8269325	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269326	8364059	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368211	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8368212	8372920	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373124	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8373125	8375905	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8375906	8376067	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8376068	8378738	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8378739	8379873	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379874	8380098	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=intron:HG00642_ch_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380099	8380547	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000544;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000544;transcript_name=HG00642_ch_T0000544;gene_name=LINC00279;ID=exon:HG00642_ch_T0000544:7;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269131	8351725	1000	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=HG00642_ch_T0000545;Name=LINC00279
HG00642_chrY	CAT	exon	8269131	8269325	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000545;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=exon:HG00642_ch_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269326	8343660	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000545;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=intron:HG00642_ch_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8343661	8343733	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000545;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=exon:HG00642_ch_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8343734	8346202	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000545;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=intron:HG00642_ch_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8346203	8351725	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000545;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000545;transcript_name=HG00642_ch_T0000545;gene_name=LINC00279;ID=exon:HG00642_ch_T0000545:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8269251	8283432	1000	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=HG00642_ch_T0000546;Name=LINC00279
HG00642_chrY	CAT	exon	8269251	8269331	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=exon:HG00642_ch_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8269332	8270833	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=intron:HG00642_ch_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8270834	8270884	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=exon:HG00642_ch_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8270885	8280842	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=intron:HG00642_ch_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8280843	8281082	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=exon:HG00642_ch_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8281083	8283180	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=intron:HG00642_ch_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8283181	8283432	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000546;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000546;transcript_name=HG00642_ch_T0000546;gene_name=LINC00279;ID=exon:HG00642_ch_T0000546:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8318639	8373163	1000	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=HG00642_ch_T0000547;Name=LINC00279
HG00642_chrY	CAT	exon	8318639	8318928	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=exon:HG00642_ch_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8318929	8364059	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=intron:HG00642_ch_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=exon:HG00642_ch_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=intron:HG00642_ch_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=exon:HG00642_ch_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=intron:HG00642_ch_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368211	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=exon:HG00642_ch_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8368212	8372920	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=intron:HG00642_ch_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373163	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000547;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000547;transcript_name=HG00642_ch_T0000547;gene_name=LINC00279;ID=exon:HG00642_ch_T0000547:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8318782	8336108	1000	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=HG00642_ch_T0000548;Name=LINC00279
HG00642_chrY	CAT	exon	8318782	8318928	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=exon:HG00642_ch_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8318929	8325263	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=intron:HG00642_ch_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8325264	8325492	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=exon:HG00642_ch_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8325493	8329835	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=intron:HG00642_ch_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8329836	8330031	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=exon:HG00642_ch_T0000548:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8330032	8335138	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=intron:HG00642_ch_T0000548:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8335139	8335288	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=exon:HG00642_ch_T0000548:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8335289	8335864	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=intron:HG00642_ch_T0000548:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8335865	8336108	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000548;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000548;transcript_name=HG00642_ch_T0000548;gene_name=LINC00279;ID=exon:HG00642_ch_T0000548:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8323998	8330546	1000	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=HG00642_ch_T0000549;Name=LINC00279
HG00642_chrY	CAT	exon	8323998	8324110	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000549;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=exon:HG00642_ch_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8324111	8329835	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000549;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=intron:HG00642_ch_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8329836	8330031	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000549;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=exon:HG00642_ch_T0000549:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8330032	8330382	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000549;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=intron:HG00642_ch_T0000549:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8330383	8330546	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000549;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000549;transcript_name=HG00642_ch_T0000549;gene_name=LINC00279;ID=exon:HG00642_ch_T0000549:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8345676	8346417	1000	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000550;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000550;gene_name=LINC00279;ID=HG00642_ch_T0000550;Name=LINC00279
HG00642_chrY	CAT	exon	8345676	8345867	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000550;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000550;transcript_name=HG00642_ch_T0000550;gene_name=LINC00279;ID=exon:HG00642_ch_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8345868	8346202	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000550;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000550;transcript_name=HG00642_ch_T0000550;gene_name=LINC00279;ID=intron:HG00642_ch_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8346203	8346417	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00642_ch_T0000550;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000550;transcript_name=HG00642_ch_T0000550;gene_name=LINC00279;ID=exon:HG00642_ch_T0000550:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8363424	8368436	1000	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=HG00642_ch_T0000563;Name=LINC00279
HG00642_chrY	CAT	exon	8363424	8363788	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=exon:HG00642_ch_T0000563:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363789	8364059	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=intron:HG00642_ch_T0000563:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=exon:HG00642_ch_T0000563:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=intron:HG00642_ch_T0000563:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=exon:HG00642_ch_T0000563:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=intron:HG00642_ch_T0000563:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368436	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000563;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000563;transcript_name=HG00642_ch_T0000563;gene_name=LINC00279;ID=exon:HG00642_ch_T0000563:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8363431	8364462	1000	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=HG00642_ch_T0000564;Name=LINC00279
HG00642_chrY	CAT	exon	8363431	8363788	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000564;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=exon:HG00642_ch_T0000564:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363789	8364059	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000564;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=intron:HG00642_ch_T0000564:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000564;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=exon:HG00642_ch_T0000564:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8364294	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000564;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=intron:HG00642_ch_T0000564:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364295	8364462	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000564;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000564;transcript_name=HG00642_ch_T0000564;gene_name=LINC00279;ID=exon:HG00642_ch_T0000564:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8363576	8373164	1000	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=HG00642_ch_T0000565;Name=LINC00279
HG00642_chrY	CAT	exon	8363576	8363788	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=exon:HG00642_ch_T0000565:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363789	8364059	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=intron:HG00642_ch_T0000565:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364060	8364134	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=exon:HG00642_ch_T0000565:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8364135	8366458	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=intron:HG00642_ch_T0000565:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8366459	8366618	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=exon:HG00642_ch_T0000565:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8366619	8368049	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=intron:HG00642_ch_T0000565:2;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8368050	8368211	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=exon:HG00642_ch_T0000565:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8368212	8372920	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=intron:HG00642_ch_T0000565:3;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373164	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000565;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000565;transcript_name=HG00642_ch_T0000565;gene_name=LINC00279;ID=exon:HG00642_ch_T0000565:4;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8371553	8373167	1000	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000573;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_G0000157;transcript_name=HG00642_ch_T0000573;gene_name=LINC00279;ID=HG00642_ch_T0000573;Name=LINC00279
HG00642_chrY	CAT	exon	8371553	8371807	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000573;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000573;transcript_name=HG00642_ch_T0000573;gene_name=LINC00279;ID=exon:HG00642_ch_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8371808	8372920	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000573;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000573;transcript_name=HG00642_ch_T0000573;gene_name=LINC00279;ID=intron:HG00642_ch_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372921	8373167	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000573;gene_id=HG00642_ch_G0000157;Parent=HG00642_ch_T0000573;transcript_name=HG00642_ch_T0000573;gene_name=LINC00279;ID=exon:HG00642_ch_T0000573:1;Name=LINC00279;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8353116	8364901	.	-	.	source_gene_common_name=ENSG00000309700;source_gene=ENSG00000309700.1;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;gene_id=HG00642_ch_G0000158;gene_biotype=lncRNA;gene_name=ENSG00000309700;gene_sources=liftoff;ID=HG00642_ch_G0000158;Name=ENSG00000309700
HG00642_chrY	CAT	transcript	8353116	8363437	1000	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=HG00642_ch_T0000551;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353116	8353358	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000551:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8359466	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000551:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000551:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8360593	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000551:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000551:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000551:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363437	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG00642_ch_T0000551;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000551;transcript_name=HG00642_ch_T0000551;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000551:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353116	8359769	1000	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG00642_ch_T0000552;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000552;gene_name=ENSG00000309700;ID=HG00642_ch_T0000552;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353116	8353358	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG00642_ch_T0000552;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000552;transcript_name=HG00642_ch_T0000552;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000552:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8359466	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG00642_ch_T0000552;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000552;transcript_name=HG00642_ch_T0000552;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000552:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359769	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG00642_ch_T0000552;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000552;transcript_name=HG00642_ch_T0000552;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000552:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8364880	1000	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=HG00642_ch_T0000553;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000553:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8359466	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000553:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000553:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8360593	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000553:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000553:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000553:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363197	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000553:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363198	8364689	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000553:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364690	8364880	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00642_ch_T0000553;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000553;transcript_name=HG00642_ch_T0000553;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000553:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8364872	1000	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=HG00642_ch_T0000554;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000554:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8359466	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000554:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000554:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8360593	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000554:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000554:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000554:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363050	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000554:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363051	8364689	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000554:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364690	8364872	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00642_ch_T0000554;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000554;transcript_name=HG00642_ch_T0000554;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000554:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8364786	1000	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=HG00642_ch_T0000555;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000555:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8360593	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000555:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000555:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000555:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363050	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000555:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363051	8364689	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000555:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364690	8364786	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00642_ch_T0000555;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000555;transcript_name=HG00642_ch_T0000555;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000555:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8363349	1000	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=HG00642_ch_T0000556;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000556;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000556:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8359466	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000556;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000556:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000556;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000556:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8362966	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000556;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000556:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363349	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00642_ch_T0000556;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000556;transcript_name=HG00642_ch_T0000556;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000556:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8363303	1000	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=HG00642_ch_T0000557;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000557;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000557:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8360593	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000557;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000557:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000557;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000557:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000557;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000557:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363303	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00642_ch_T0000557;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000557;transcript_name=HG00642_ch_T0000557;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000557:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353117	8363168	1000	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00642_ch_T0000558;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000558;gene_name=ENSG00000309700;ID=HG00642_ch_T0000558;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353117	8353358	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00642_ch_T0000558;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000558;transcript_name=HG00642_ch_T0000558;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000558:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8362966	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00642_ch_T0000558;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000558;transcript_name=HG00642_ch_T0000558;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000558:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363168	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00642_ch_T0000558;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000558;transcript_name=HG00642_ch_T0000558;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000558:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8353118	8359759	1000	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=HG00642_ch_T0000559;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8353118	8353358	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000559;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000559:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8353359	8354953	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000559;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000559:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8354954	8354992	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000559;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000559:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8354993	8359466	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000559;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000559:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359759	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00642_ch_T0000559;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000559;transcript_name=HG00642_ch_T0000559;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000559:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8357848	8364901	1000	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=HG00642_ch_T0000560;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8357848	8358312	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8358313	8359466	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8360593	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363050	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000560:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8363051	8364689	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000560:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8364690	8364901	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00642_ch_T0000560;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000560;transcript_name=HG00642_ch_T0000560;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000560:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8357848	8359765	1000	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00642_ch_T0000561;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000561;gene_name=ENSG00000309700;ID=HG00642_ch_T0000561;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8357848	8358312	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00642_ch_T0000561;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000561;transcript_name=HG00642_ch_T0000561;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8358313	8359466	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00642_ch_T0000561;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000561;transcript_name=HG00642_ch_T0000561;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359765	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00642_ch_T0000561;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000561;transcript_name=HG00642_ch_T0000561;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000561:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8357851	8363136	1000	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_G0000158;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=HG00642_ch_T0000562;Name=ENSG00000309700
HG00642_chrY	CAT	exon	8357851	8358312	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8358313	8359466	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8359467	8359615	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8359616	8360593	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8360594	8360668	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8360669	8362966	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=intron:HG00642_ch_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8362967	8363136	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00642_ch_T0000562;gene_id=HG00642_ch_G0000158;Parent=HG00642_ch_T0000562;transcript_name=HG00642_ch_T0000562;gene_name=ENSG00000309700;ID=exon:HG00642_ch_T0000562:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8368297	8396620	.	-	.	source_gene_common_name=TTTY18;source_gene=ENSG00000233699.3;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;gene_id=HG00642_ch_G0000159;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG00642_ch_G0000159;Name=TTTY18
HG00642_chrY	CAT	transcript	8368297	8386686	1000	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=HG00642_ch_T0000566;Name=TTTY18
HG00642_chrY	CAT	exon	8368297	8369135	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8372385	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8374778	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8379465	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8379466	8379671	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379672	8380155	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380156	8380233	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:5;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8380234	8386526	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=intron:HG00642_ch_T0000566:5;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8386527	8386686	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00642_ch_T0000566;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000566;transcript_name=HG00642_ch_T0000566;gene_name=TTTY18;ID=exon:HG00642_ch_T0000566:6;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368300	8377182	1000	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=HG00642_ch_T0000567;Name=TTTY18
HG00642_chrY	CAT	exon	8368300	8369135	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=exon:HG00642_ch_T0000567:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=intron:HG00642_ch_T0000567:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=exon:HG00642_ch_T0000567:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8372385	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=intron:HG00642_ch_T0000567:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=exon:HG00642_ch_T0000567:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8374778	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=intron:HG00642_ch_T0000567:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=exon:HG00642_ch_T0000567:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8376972	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=intron:HG00642_ch_T0000567:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377182	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00642_ch_T0000567;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000567;transcript_name=HG00642_ch_T0000567;gene_name=TTTY18;ID=exon:HG00642_ch_T0000567:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368822	8377182	1000	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=HG00642_ch_T0000568;Name=TTTY18
HG00642_chrY	CAT	exon	8368822	8369135	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=exon:HG00642_ch_T0000568:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=intron:HG00642_ch_T0000568:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=exon:HG00642_ch_T0000568:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8372385	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=intron:HG00642_ch_T0000568:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=exon:HG00642_ch_T0000568:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8376972	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=intron:HG00642_ch_T0000568:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377182	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00642_ch_T0000568;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000568;transcript_name=HG00642_ch_T0000568;gene_name=TTTY18;ID=exon:HG00642_ch_T0000568:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368826	8377147	1000	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=HG00642_ch_T0000569;Name=TTTY18
HG00642_chrY	CAT	exon	8368826	8369135	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=intron:HG00642_ch_T0000569:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8371224	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=intron:HG00642_ch_T0000569:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8371225	8371360	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8371361	8372385	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=intron:HG00642_ch_T0000569:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8374778	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=intron:HG00642_ch_T0000569:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8376972	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=intron:HG00642_ch_T0000569:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377147	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00642_ch_T0000569;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000569;transcript_name=HG00642_ch_T0000569;gene_name=TTTY18;ID=exon:HG00642_ch_T0000569:5;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368826	8377144	1000	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=HG00642_ch_T0000570;Name=TTTY18
HG00642_chrY	CAT	exon	8368826	8369135	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=exon:HG00642_ch_T0000570:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8372385	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=intron:HG00642_ch_T0000570:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=exon:HG00642_ch_T0000570:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8374778	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=intron:HG00642_ch_T0000570:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=exon:HG00642_ch_T0000570:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8376972	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=intron:HG00642_ch_T0000570:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377144	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00642_ch_T0000570;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000570;transcript_name=HG00642_ch_T0000570;gene_name=TTTY18;ID=exon:HG00642_ch_T0000570:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368828	8396586	1000	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=HG00642_ch_T0000571;Name=TTTY18
HG00642_chrY	CAT	exon	8368828	8369135	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=intron:HG00642_ch_T0000571:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8372385	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=intron:HG00642_ch_T0000571:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8372386	8372440	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8372441	8379465	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=intron:HG00642_ch_T0000571:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8379466	8379671	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379672	8380155	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=intron:HG00642_ch_T0000571:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380156	8380233	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8380234	8396413	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=intron:HG00642_ch_T0000571:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8396414	8396586	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00642_ch_T0000571;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000571;transcript_name=HG00642_ch_T0000571;gene_name=TTTY18;ID=exon:HG00642_ch_T0000571:5;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8368828	8371424	1000	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=HG00642_ch_T0000572;Name=TTTY18
HG00642_chrY	CAT	exon	8368828	8369135	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000572;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=exon:HG00642_ch_T0000572:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369136	8369423	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000572;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=intron:HG00642_ch_T0000572:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8369424	8369642	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000572;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=exon:HG00642_ch_T0000572:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8369643	8371224	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000572;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=intron:HG00642_ch_T0000572:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8371225	8371424	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00642_ch_T0000572;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000572;transcript_name=HG00642_ch_T0000572;gene_name=TTTY18;ID=exon:HG00642_ch_T0000572:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8372888	8377178	1000	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=HG00642_ch_T0000574;Name=TTTY18
HG00642_chrY	CAT	exon	8372888	8373069	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000574;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=exon:HG00642_ch_T0000574:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8373070	8374778	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000574;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=intron:HG00642_ch_T0000574:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000574;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=exon:HG00642_ch_T0000574:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8376972	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000574;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=intron:HG00642_ch_T0000574:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377178	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00642_ch_T0000574;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000574;transcript_name=HG00642_ch_T0000574;gene_name=TTTY18;ID=exon:HG00642_ch_T0000574:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8372889	8377181	1000	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=HG00642_ch_T0000575;Name=TTTY18
HG00642_chrY	CAT	exon	8372889	8373136	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000575;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=exon:HG00642_ch_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8373137	8374778	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000575;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=intron:HG00642_ch_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000575;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=exon:HG00642_ch_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8376972	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000575;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=intron:HG00642_ch_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8376973	8377181	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00642_ch_T0000575;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000575;transcript_name=HG00642_ch_T0000575;gene_name=TTTY18;ID=exon:HG00642_ch_T0000575:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8372891	8381024	1000	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=HG00642_ch_T0000576;Name=TTTY18
HG00642_chrY	CAT	exon	8372891	8373069	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=exon:HG00642_ch_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8373070	8374778	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=intron:HG00642_ch_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8374779	8374863	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=exon:HG00642_ch_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8374864	8379465	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=intron:HG00642_ch_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8379466	8379671	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=exon:HG00642_ch_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379672	8380155	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=intron:HG00642_ch_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380156	8380233	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=exon:HG00642_ch_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8380234	8380814	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=intron:HG00642_ch_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380815	8381024	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00642_ch_T0000576;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000576;transcript_name=HG00642_ch_T0000576;gene_name=TTTY18;ID=exon:HG00642_ch_T0000576:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8379028	8396601	1000	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=HG00642_ch_T0000577;Name=TTTY18
HG00642_chrY	CAT	exon	8379028	8379103	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=exon:HG00642_ch_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379104	8379465	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=intron:HG00642_ch_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8379466	8379671	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=exon:HG00642_ch_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8379672	8380155	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=intron:HG00642_ch_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380156	8380233	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=exon:HG00642_ch_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8380234	8380814	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=intron:HG00642_ch_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8380815	8381031	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=exon:HG00642_ch_T0000577:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8381032	8396413	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=intron:HG00642_ch_T0000577:3;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8396414	8396601	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00642_ch_T0000577;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000577;transcript_name=HG00642_ch_T0000577;gene_name=TTTY18;ID=exon:HG00642_ch_T0000577:4;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8389806	8396620	1000	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00642_ch_T0000578;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_G0000159;transcript_name=HG00642_ch_T0000578;gene_name=TTTY18;ID=HG00642_ch_T0000578;Name=TTTY18
HG00642_chrY	CAT	exon	8389806	8389953	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00642_ch_T0000578;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000578;transcript_name=HG00642_ch_T0000578;gene_name=TTTY18;ID=exon:HG00642_ch_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8389954	8396413	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00642_ch_T0000578;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000578;transcript_name=HG00642_ch_T0000578;gene_name=TTTY18;ID=intron:HG00642_ch_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8396414	8396620	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00642_ch_T0000578;gene_id=HG00642_ch_G0000159;Parent=HG00642_ch_T0000578;transcript_name=HG00642_ch_T0000578;gene_name=TTTY18;ID=exon:HG00642_ch_T0000578:1;Name=TTTY18;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8390181	8390992	.	+	.	source_gene_common_name=TTTY19;source_gene=ENSG00000232419.1;gene_id=HG00642_ch_G0000160;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG00642_ch_G0000160;Name=TTTY19
HG00642_chrY	CAT	transcript	8390181	8390992	1000	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00642_ch_T0000579;gene_id=HG00642_ch_G0000160;Parent=HG00642_ch_G0000160;transcript_name=HG00642_ch_T0000579;gene_name=TTTY19;ID=HG00642_ch_T0000579;Name=TTTY19
HG00642_chrY	CAT	exon	8390181	8390268	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00642_ch_T0000579;gene_id=HG00642_ch_G0000160;Parent=HG00642_ch_T0000579;transcript_name=HG00642_ch_T0000579;gene_name=TTTY19;ID=exon:HG00642_ch_T0000579:0;Name=TTTY19;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8390269	8390811	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00642_ch_T0000579;gene_id=HG00642_ch_G0000160;Parent=HG00642_ch_T0000579;transcript_name=HG00642_ch_T0000579;gene_name=TTTY19;ID=intron:HG00642_ch_T0000579:0;Name=TTTY19;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8390812	8390992	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00642_ch_T0000579;gene_id=HG00642_ch_G0000160;Parent=HG00642_ch_T0000579;transcript_name=HG00642_ch_T0000579;gene_name=TTTY19;ID=exon:HG00642_ch_T0000579:1;Name=TTTY19;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8407473	8424958	.	-	.	source_gene_common_name=ENSG00000309903;source_gene=ENSG00000309903.1;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;gene_id=HG00642_ch_G0000161;gene_biotype=lncRNA;gene_name=ENSG00000309903;gene_sources=liftoff;ID=HG00642_ch_G0000161;Name=ENSG00000309903
HG00642_chrY	CAT	transcript	8407473	8409992	1000	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_G0000161;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=HG00642_ch_T0000580;Name=ENSG00000309903
HG00642_chrY	CAT	exon	8407473	8407789	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000580:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8407790	8407886	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000580:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8407887	8407982	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000580:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8407983	8408072	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000580:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8408073	8408335	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000580:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8408336	8409803	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000580:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8409804	8409992	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00642_ch_T0000580;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000580;transcript_name=HG00642_ch_T0000580;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000580:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8407476	8424958	1000	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_G0000161;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=HG00642_ch_T0000581;Name=ENSG00000309903
HG00642_chrY	CAT	exon	8407476	8407789	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000581:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8407790	8407886	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000581:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8407887	8407982	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000581:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8407983	8408072	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000581:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8408073	8408335	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000581:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8408336	8419070	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000581:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8419071	8419170	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000581:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8419171	8424778	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000581:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8424779	8424958	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00642_ch_T0000581;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000581;transcript_name=HG00642_ch_T0000581;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000581:4;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8408024	8409969	1000	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00642_ch_T0000582;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_G0000161;transcript_name=HG00642_ch_T0000582;gene_name=ENSG00000309903;ID=HG00642_ch_T0000582;Name=ENSG00000309903
HG00642_chrY	CAT	exon	8408024	8408335	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00642_ch_T0000582;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000582;transcript_name=HG00642_ch_T0000582;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000582:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8408336	8409803	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00642_ch_T0000582;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000582;transcript_name=HG00642_ch_T0000582;gene_name=ENSG00000309903;ID=intron:HG00642_ch_T0000582:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8409804	8409969	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00642_ch_T0000582;gene_id=HG00642_ch_G0000161;Parent=HG00642_ch_T0000582;transcript_name=HG00642_ch_T0000582;gene_name=ENSG00000309903;ID=exon:HG00642_ch_T0000582:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8469020	8503172	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000290381.2;gene_id=HG00642_ch_G0000162;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG00642_ch_G0000162;Name=TTTY11
HG00642_chrY	CAT	transcript	8469020	8503091	1000	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_G0000162;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=HG00642_ch_T0000583;Name=TTTY11
HG00642_chrY	CAT	exon	8469020	8469116	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=exon:HG00642_ch_T0000583:0;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8469117	8469597	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=intron:HG00642_ch_T0000583:0;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8469598	8469913	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=exon:HG00642_ch_T0000583:1;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8469914	8474709	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=intron:HG00642_ch_T0000583:1;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8474710	8475012	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=exon:HG00642_ch_T0000583:2;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8475013	8480570	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=intron:HG00642_ch_T0000583:2;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8480571	8480654	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=exon:HG00642_ch_T0000583:3;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8480655	8503054	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=intron:HG00642_ch_T0000583:3;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8503055	8503091	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000583;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000583;transcript_name=HG00642_ch_T0000583;gene_name=TTTY11;ID=exon:HG00642_ch_T0000583:4;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8501185	8503172	1000	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000585;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_G0000162;transcript_name=HG00642_ch_T0000585;gene_name=TTTY11;ID=HG00642_ch_T0000585;Name=TTTY11
HG00642_chrY	CAT	exon	8501185	8501638	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000585;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000585;transcript_name=HG00642_ch_T0000585;gene_name=TTTY11;ID=exon:HG00642_ch_T0000585:0;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8501639	8503054	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000585;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000585;transcript_name=HG00642_ch_T0000585;gene_name=TTTY11;ID=intron:HG00642_ch_T0000585:0;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8503055	8503172	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000585;gene_id=HG00642_ch_G0000162;Parent=HG00642_ch_T0000585;transcript_name=HG00642_ch_T0000585;gene_name=TTTY11;ID=exon:HG00642_ch_T0000585:1;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8474710	8475012	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000180910.9;gene_id=HG00642_ch_G0000163;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY11;gene_sources=liftoff;ID=HG00642_ch_G0000163;Name=TTTY11
HG00642_chrY	CAT	transcript	8474710	8475012	1000	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000584;gene_id=HG00642_ch_G0000163;Parent=HG00642_ch_G0000163;transcript_name=HG00642_ch_T0000584;gene_name=TTTY11;ID=HG00642_ch_T0000584;Name=TTTY11
HG00642_chrY	CAT	exon	8474710	8475012	.	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00642_ch_T0000584;gene_id=HG00642_ch_G0000163;Parent=HG00642_ch_T0000584;transcript_name=HG00642_ch_T0000584;gene_name=TTTY11;ID=exon:HG00642_ch_T0000584:0;Name=TTTY11;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8586932	8589005	.	-	.	source_gene_common_name=ENSG00000228207;source_gene=ENSG00000228207.1;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;gene_id=HG00642_ch_G0000164;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228207;gene_sources=liftoff;ID=HG00642_ch_G0000164;Name=ENSG00000228207
HG00642_chrY	CAT	transcript	8586932	8589005	1000	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_G0000164;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=HG00642_ch_T0000586;Name=ENSG00000228207
HG00642_chrY	CAT	exon	8586932	8586987	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=exon:HG00642_ch_T0000586:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8586988	8587098	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=intron:HG00642_ch_T0000586:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8587099	8587242	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=exon:HG00642_ch_T0000586:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8587243	8587329	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=intron:HG00642_ch_T0000586:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8587330	8587468	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=exon:HG00642_ch_T0000586:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8587469	8588719	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=intron:HG00642_ch_T0000586:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8588720	8589005	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00642_ch_T0000586;gene_id=HG00642_ch_G0000164;Parent=HG00642_ch_T0000586;transcript_name=HG00642_ch_T0000586;gene_name=ENSG00000228207;ID=exon:HG00642_ch_T0000586:3;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8591953	8601802	.	+	.	source_gene_common_name=ENSG00000173357;source_gene=ENSG00000173357.13;gene_id=HG00642_ch_G0000165;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000173357;gene_sources=liftoff;ID=HG00642_ch_G0000165;Name=ENSG00000173357
HG00642_chrY	CAT	transcript	8591953	8601802	1000	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_G0000165;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=HG00642_ch_T0000587;Name=ENSG00000173357
HG00642_chrY	CAT	exon	8591953	8592061	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8592062	8592822	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8592823	8592926	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8592927	8595611	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8595612	8595789	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8595790	8597674	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8597675	8597827	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8597828	8599821	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8599822	8599933	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8599934	8600812	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8600813	8600923	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8600924	8601004	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8601005	8601093	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8601094	8601499	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=intron:HG00642_ch_T0000587:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8601500	8601802	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00642_ch_T0000587;gene_id=HG00642_ch_G0000165;Parent=HG00642_ch_T0000587;transcript_name=HG00642_ch_T0000587;gene_name=ENSG00000173357;ID=exon:HG00642_ch_T0000587:7;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8595677	8599884	.	+	.	source_gene_common_name=ENSG00000290342;source_gene=ENSG00000290342.1;gene_id=HG00642_ch_G0000166;gene_biotype=lncRNA;gene_name=ENSG00000290342;gene_sources=liftoff;ID=HG00642_ch_G0000166;Name=ENSG00000290342
HG00642_chrY	CAT	transcript	8595677	8599884	1000	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_G0000166;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=HG00642_ch_T0000588;Name=ENSG00000290342
HG00642_chrY	CAT	exon	8595677	8595789	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_T0000588;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=exon:HG00642_ch_T0000588:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8595790	8597674	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_T0000588;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=intron:HG00642_ch_T0000588:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8597675	8597827	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_T0000588;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=exon:HG00642_ch_T0000588:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8597828	8599821	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_T0000588;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=intron:HG00642_ch_T0000588:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8599822	8599884	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00642_ch_T0000588;gene_id=HG00642_ch_G0000166;Parent=HG00642_ch_T0000588;transcript_name=HG00642_ch_T0000588;gene_name=ENSG00000290342;ID=exon:HG00642_ch_T0000588:2;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8601000	8608432	.	-	.	source_gene_common_name=ENSG00000301122;source_gene=ENSG00000301122.1;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;gene_id=HG00642_ch_G0000167;gene_biotype=lncRNA;gene_name=ENSG00000301122;gene_sources=liftoff;ID=HG00642_ch_G0000167;Name=ENSG00000301122
HG00642_chrY	CAT	transcript	8601000	8604540	1000	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00642_ch_T0000589;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_G0000167;transcript_name=HG00642_ch_T0000589;gene_name=ENSG00000301122;ID=HG00642_ch_T0000589;Name=ENSG00000301122
HG00642_chrY	CAT	exon	8601000	8601772	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00642_ch_T0000589;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000589;transcript_name=HG00642_ch_T0000589;gene_name=ENSG00000301122;ID=exon:HG00642_ch_T0000589:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8601773	8604014	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00642_ch_T0000589;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000589;transcript_name=HG00642_ch_T0000589;gene_name=ENSG00000301122;ID=intron:HG00642_ch_T0000589:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8604015	8604540	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00642_ch_T0000589;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000589;transcript_name=HG00642_ch_T0000589;gene_name=ENSG00000301122;ID=exon:HG00642_ch_T0000589:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8601406	8608432	1000	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_G0000167;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=HG00642_ch_T0000590;Name=ENSG00000301122
HG00642_chrY	CAT	exon	8601406	8601772	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000590;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=exon:HG00642_ch_T0000590:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8601773	8604014	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000590;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=intron:HG00642_ch_T0000590:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8604015	8604592	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000590;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=exon:HG00642_ch_T0000590:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8604593	8608316	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000590;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=intron:HG00642_ch_T0000590:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8608317	8608432	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00642_ch_T0000590;gene_id=HG00642_ch_G0000167;Parent=HG00642_ch_T0000590;transcript_name=HG00642_ch_T0000590;gene_name=ENSG00000301122;ID=exon:HG00642_ch_T0000590:2;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8616798	8617183	.	-	.	source_gene_common_name=ENSG00000273731;source_gene=ENSG00000273731.1;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;gene_id=HG00642_ch_G0000168;gene_biotype=processed_pseudogene;gene_name=ENSG00000273731;gene_sources=liftoff;ID=HG00642_ch_G0000168;Name=ENSG00000273731
HG00642_chrY	CAT	transcript	8616798	8617183	1000	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG00642_ch_T0000591;gene_id=HG00642_ch_G0000168;Parent=HG00642_ch_G0000168;transcript_name=HG00642_ch_T0000591;gene_name=ENSG00000273731;ID=HG00642_ch_T0000591;Name=ENSG00000273731
HG00642_chrY	CAT	exon	8616798	8617183	.	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG00642_ch_T0000591;gene_id=HG00642_ch_G0000168;Parent=HG00642_ch_T0000591;transcript_name=HG00642_ch_T0000591;gene_name=ENSG00000273731;ID=exon:HG00642_ch_T0000591:0;Name=ENSG00000273731;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8657486	8659830	.	-	.	source_gene_common_name=ENSG00000230025;source_gene=ENSG00000230025.1;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;gene_id=HG00642_ch_G0000169;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230025;gene_sources=liftoff;ID=HG00642_ch_G0000169;Name=ENSG00000230025
HG00642_chrY	CAT	transcript	8657486	8659830	1000	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_G0000169;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=HG00642_ch_T0000592;Name=ENSG00000230025
HG00642_chrY	CAT	exon	8657486	8657629	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_T0000592;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=exon:HG00642_ch_T0000592:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8657630	8657721	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_T0000592;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=intron:HG00642_ch_T0000592:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8657722	8657766	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_T0000592;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=exon:HG00642_ch_T0000592:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8657767	8659461	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_T0000592;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=intron:HG00642_ch_T0000592:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8659462	8659830	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00642_ch_T0000592;gene_id=HG00642_ch_G0000169;Parent=HG00642_ch_T0000592;transcript_name=HG00642_ch_T0000592;gene_name=ENSG00000230025;ID=exon:HG00642_ch_T0000592:2;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8716328	8725722	.	+	.	source_gene_common_name=OFD1P3Y;source_gene=ENSG00000231988.1;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;gene_id=HG00642_ch_G0000170;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P3Y;gene_sources=liftoff;ID=HG00642_ch_G0000170;Name=OFD1P3Y
HG00642_chrY	CAT	transcript	8716328	8725722	1000	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_G0000170;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=HG00642_ch_T0000593;Name=OFD1P3Y
HG00642_chrY	CAT	exon	8716328	8716464	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8716465	8716788	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=intron:HG00642_ch_T0000593:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8716789	8716963	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8716964	8720406	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=intron:HG00642_ch_T0000593:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8720407	8720522	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8720523	8722190	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=intron:HG00642_ch_T0000593:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8722191	8722264	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8722265	8723409	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=intron:HG00642_ch_T0000593:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8723410	8723501	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8723502	8725533	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=intron:HG00642_ch_T0000593:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8725534	8725722	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00642_ch_T0000593;gene_id=HG00642_ch_G0000170;Parent=HG00642_ch_T0000593;transcript_name=HG00642_ch_T0000593;gene_name=OFD1P3Y;ID=exon:HG00642_ch_T0000593:5;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8801847	8803464	.	-	.	source_gene_common_name=CDY3P;source_gene=ENSG00000232235.1;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;gene_id=HG00642_ch_G0000171;gene_biotype=processed_pseudogene;gene_name=CDY3P;gene_sources=liftoff;ID=HG00642_ch_G0000171;Name=CDY3P
HG00642_chrY	CAT	transcript	8801847	8803464	1000	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG00642_ch_T0000594;gene_id=HG00642_ch_G0000171;Parent=HG00642_ch_G0000171;transcript_name=HG00642_ch_T0000594;gene_name=CDY3P;ID=HG00642_ch_T0000594;Name=CDY3P
HG00642_chrY	CAT	exon	8801847	8803464	.	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG00642_ch_T0000594;gene_id=HG00642_ch_G0000171;Parent=HG00642_ch_T0000594;transcript_name=HG00642_ch_T0000594;gene_name=CDY3P;ID=exon:HG00642_ch_T0000594:0;Name=CDY3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8819456	8821565	.	+	.	source_gene_common_name=USP9YP22;source_gene=ENSG00000224408.1;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;gene_id=HG00642_ch_G0000172;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP22;gene_sources=liftoff;ID=HG00642_ch_G0000172;Name=USP9YP22
HG00642_chrY	CAT	transcript	8819456	8821565	1000	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00642_ch_T0000595;gene_id=HG00642_ch_G0000172;Parent=HG00642_ch_G0000172;transcript_name=HG00642_ch_T0000595;gene_name=USP9YP22;ID=HG00642_ch_T0000595;Name=USP9YP22
HG00642_chrY	CAT	exon	8819456	8819547	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00642_ch_T0000595;gene_id=HG00642_ch_G0000172;Parent=HG00642_ch_T0000595;transcript_name=HG00642_ch_T0000595;gene_name=USP9YP22;ID=exon:HG00642_ch_T0000595:0;Name=USP9YP22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8819548	8821363	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00642_ch_T0000595;gene_id=HG00642_ch_G0000172;Parent=HG00642_ch_T0000595;transcript_name=HG00642_ch_T0000595;gene_name=USP9YP22;ID=intron:HG00642_ch_T0000595:0;Name=USP9YP22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8821364	8821565	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00642_ch_T0000595;gene_id=HG00642_ch_G0000172;Parent=HG00642_ch_T0000595;transcript_name=HG00642_ch_T0000595;gene_name=USP9YP22;ID=exon:HG00642_ch_T0000595:1;Name=USP9YP22;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8825391	8840392	.	-	.	source_gene_common_name=USP9YP4;source_gene=ENSG00000238154.1;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;gene_id=HG00642_ch_G0000173;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP4;gene_sources=liftoff;ID=HG00642_ch_G0000173;Name=USP9YP4
HG00642_chrY	CAT	transcript	8825391	8840392	1000	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_G0000173;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=HG00642_ch_T0000596;Name=USP9YP4
HG00642_chrY	CAT	exon	8825391	8825514	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:0;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8825515	8825949	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=intron:HG00642_ch_T0000596:0;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8825950	8826834	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:1;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8826835	8829363	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=intron:HG00642_ch_T0000596:1;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8829364	8829487	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:2;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8829488	8834863	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=intron:HG00642_ch_T0000596:2;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8834864	8835053	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:3;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8835054	8837165	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=intron:HG00642_ch_T0000596:3;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8837166	8837372	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:4;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8837373	8840177	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=intron:HG00642_ch_T0000596:4;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8840178	8840392	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00642_ch_T0000596;gene_id=HG00642_ch_G0000173;Parent=HG00642_ch_T0000596;transcript_name=HG00642_ch_T0000596;gene_name=USP9YP4;ID=exon:HG00642_ch_T0000596:5;Name=USP9YP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8866696	8867028	.	+	.	source_gene_common_name=ELOCP4;source_gene=ENSG00000232924.1;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;gene_id=HG00642_ch_G0000174;gene_biotype=processed_pseudogene;gene_name=ELOCP4;gene_sources=liftoff;ID=HG00642_ch_G0000174;Name=ELOCP4
HG00642_chrY	CAT	transcript	8866696	8867028	1000	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG00642_ch_T0000597;gene_id=HG00642_ch_G0000174;Parent=HG00642_ch_G0000174;transcript_name=HG00642_ch_T0000597;gene_name=ELOCP4;ID=HG00642_ch_T0000597;Name=ELOCP4
HG00642_chrY	CAT	exon	8866696	8867028	.	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG00642_ch_T0000597;gene_id=HG00642_ch_G0000174;Parent=HG00642_ch_T0000597;transcript_name=HG00642_ch_T0000597;gene_name=ELOCP4;ID=exon:HG00642_ch_T0000597:0;Name=ELOCP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8928031	8947299	.	+	.	source_gene_common_name=ENSG00000299745;source_gene=ENSG00000299745.1;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;gene_id=HG00642_ch_G0000175;gene_biotype=lncRNA;gene_name=ENSG00000299745;gene_sources=liftoff;ID=HG00642_ch_G0000175;Name=ENSG00000299745
HG00642_chrY	CAT	transcript	8928031	8947299	1000	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_G0000175;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=HG00642_ch_T0000598;Name=ENSG00000299745
HG00642_chrY	CAT	exon	8928031	8928343	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=exon:HG00642_ch_T0000598:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8928344	8929588	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=intron:HG00642_ch_T0000598:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8929589	8929663	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=exon:HG00642_ch_T0000598:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8929664	8940329	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=intron:HG00642_ch_T0000598:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8940330	8940442	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=exon:HG00642_ch_T0000598:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8940443	8944031	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=intron:HG00642_ch_T0000598:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8944032	8944199	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=exon:HG00642_ch_T0000598:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8944200	8946932	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=intron:HG00642_ch_T0000598:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8946933	8947299	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00642_ch_T0000598;gene_id=HG00642_ch_G0000175;Parent=HG00642_ch_T0000598;transcript_name=HG00642_ch_T0000598;gene_name=ENSG00000299745;ID=exon:HG00642_ch_T0000598:4;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8944404	8960670	.	-	.	source_gene_common_name=ENSG00000299768;source_gene=ENSG00000299768.1;gene_id=HG00642_ch_G0000176;gene_biotype=lncRNA;gene_name=ENSG00000299768;gene_sources=liftoff;ID=HG00642_ch_G0000176;Name=ENSG00000299768
HG00642_chrY	CAT	transcript	8944404	8960670	1000	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=HG00642_ch_T0000599;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8944404	8944621	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8944622	8947628	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947629	8947717	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947718	8949496	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8949497	8949607	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949608	8950562	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8950563	8950677	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8950678	8952725	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000599:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960670	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000599;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000599;transcript_name=HG00642_ch_T0000599;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000599:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8944406	8960590	1000	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=HG00642_ch_T0000600;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8944406	8944621	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8944622	8947628	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947629	8947717	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947718	8947802	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947803	8947913	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947914	8949496	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8949497	8949607	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949608	8950562	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8950563	8950677	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8950678	8952725	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960461	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000600:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960462	8960590	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000600;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000600;transcript_name=HG00642_ch_T0000600;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000600:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8944406	8960628	1000	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=HG00642_ch_T0000601;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8944406	8944621	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8944622	8947628	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947629	8947717	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947718	8949496	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8949497	8949607	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949608	8952725	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000601:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960628	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000601;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000601;transcript_name=HG00642_ch_T0000601;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000601:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8944406	8960628	1000	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=HG00642_ch_T0000602;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8944406	8944621	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8944622	8947628	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947629	8947717	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947718	8947802	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947803	8947913	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947914	8949496	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8949497	8949607	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949608	8950562	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8950563	8950677	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8950678	8952725	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000602:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960628	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000602;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000602;transcript_name=HG00642_ch_T0000602;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000602:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8949248	8960653	1000	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=HG00642_ch_T0000604;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8949248	8950677	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8950678	8952725	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000604:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000604:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000604:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000604:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000604:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960653	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000604;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000604;transcript_name=HG00642_ch_T0000604;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000604:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8954041	8960653	1000	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=HG00642_ch_T0000605;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8954041	8954956	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000605:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000605:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000605:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000605:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000605:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000605:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960653	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000605;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000605;transcript_name=HG00642_ch_T0000605;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000605:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8957460	8960627	1000	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_G0000176;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=HG00642_ch_T0000606;Name=ENSG00000299768
HG00642_chrY	CAT	exon	8957460	8958075	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000606;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000606:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000606;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000606:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958660	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000606;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000606:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958661	8960515	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000606;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=intron:HG00642_ch_T0000606:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8960516	8960627	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00642_ch_T0000606;gene_id=HG00642_ch_G0000176;Parent=HG00642_ch_T0000606;transcript_name=HG00642_ch_T0000606;gene_name=ENSG00000299768;ID=exon:HG00642_ch_T0000606:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8946917	8958656	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=ENSG00000197038.6;gene_id=HG00642_ch_G0000177;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG00642_ch_G0000177;Name=RBMY1A3P
HG00642_chrY	CAT	transcript	8946917	8958656	1000	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_G0000177;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=HG00642_ch_T0000603;Name=RBMY1A3P
HG00642_chrY	CAT	exon	8946917	8947218	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947219	8947802	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8947803	8947913	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8947914	8948411	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8948412	8948522	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8948523	8948959	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8948960	8949069	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949070	8949496	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8949497	8949607	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8949608	8950562	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8950563	8950677	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8950678	8952725	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8952726	8952878	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8952879	8954778	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8954779	8954956	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8954957	8957971	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8957972	8958075	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8958076	8958547	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=intron:HG00642_ch_T0000603:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8958548	8958656	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00642_ch_T0000603;gene_id=HG00642_ch_G0000177;Parent=HG00642_ch_T0000603;transcript_name=HG00642_ch_T0000603;gene_name=RBMY1A3P;ID=exon:HG00642_ch_T0000603:9;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8961586	8961834	.	+	.	source_gene_common_name=ENSG00000275310;source_gene=ENSG00000275310.1;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;gene_id=HG00642_ch_G0000178;gene_biotype=processed_pseudogene;gene_name=ENSG00000275310;gene_sources=liftoff;ID=HG00642_ch_G0000178;Name=ENSG00000275310
HG00642_chrY	CAT	transcript	8961586	8961834	1000	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG00642_ch_T0000607;gene_id=HG00642_ch_G0000178;Parent=HG00642_ch_G0000178;transcript_name=HG00642_ch_T0000607;gene_name=ENSG00000275310;ID=HG00642_ch_T0000607;Name=ENSG00000275310
HG00642_chrY	CAT	exon	8961586	8961834	.	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG00642_ch_T0000607;gene_id=HG00642_ch_G0000178;Parent=HG00642_ch_T0000607;transcript_name=HG00642_ch_T0000607;gene_name=ENSG00000275310;ID=exon:HG00642_ch_T0000607:0;Name=ENSG00000275310;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8965667	8970619	.	-	.	source_gene_common_name=TTTY20;source_gene=ENSG00000232808.1;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;gene_id=HG00642_ch_G0000179;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG00642_ch_G0000179;Name=TTTY20
HG00642_chrY	CAT	transcript	8965667	8970619	1000	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00642_ch_T0000608;gene_id=HG00642_ch_G0000179;Parent=HG00642_ch_G0000179;transcript_name=HG00642_ch_T0000608;gene_name=TTTY20;ID=HG00642_ch_T0000608;Name=TTTY20
HG00642_chrY	CAT	exon	8965667	8965843	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00642_ch_T0000608;gene_id=HG00642_ch_G0000179;Parent=HG00642_ch_T0000608;transcript_name=HG00642_ch_T0000608;gene_name=TTTY20;ID=exon:HG00642_ch_T0000608:0;Name=TTTY20;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8965844	8970537	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00642_ch_T0000608;gene_id=HG00642_ch_G0000179;Parent=HG00642_ch_T0000608;transcript_name=HG00642_ch_T0000608;gene_name=TTTY20;ID=intron:HG00642_ch_T0000608:0;Name=TTTY20;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8970538	8970619	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00642_ch_T0000608;gene_id=HG00642_ch_G0000179;Parent=HG00642_ch_T0000608;transcript_name=HG00642_ch_T0000608;gene_name=TTTY20;ID=exon:HG00642_ch_T0000608:1;Name=TTTY20;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8973251	8976047	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000426950.6;gene_id=HG00642_ch_G0000180;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=HG00642_ch_G0000180;Name=TSPY8
HG00642_chrY	CAT	transcript	8973251	8976047	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_G0000180;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=HG00642_ch_T0000609;Name=TSPY8
HG00642_chrY	CAT	exon	8973251	8973782	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8973297	8973782	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	8973297	8973299	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=start_codon:HG00642_ch_T0000609;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8973783	8974389	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=intron:HG00642_ch_T0000609:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974390	8974467	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974390	8974467	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974468	8974595	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=intron:HG00642_ch_T0000609:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974596	8974707	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974596	8974707	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974708	8974808	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=intron:HG00642_ch_T0000609:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974809	8974954	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974809	8974954	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974955	8975060	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=intron:HG00642_ch_T0000609:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975061	8975142	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8975061	8975142	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8975143	8975836	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=intron:HG00642_ch_T0000609:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975837	8976047	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=exon:HG00642_ch_T0000609:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8975837	8975859	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000609:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	8975857	8975859	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6;transcript_id=HG00642_ch_T0000609;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000609;transcript_name=HG00642_ch_T0000609;gene_name=TSPY8;ID=stop_codon:HG00642_ch_T0000609;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8973251	8976046	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_G0000180;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=HG00642_ch_T0000610;Name=TSPY8
HG00642_chrY	CAT	exon	8973251	8973383	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8973297	8973383	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	8973297	8973299	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=start_codon:HG00642_ch_T0000610;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8973384	8973644	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8973645	8973782	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8973645	8973782	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8973783	8974389	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974390	8974467	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974390	8974467	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974468	8974595	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974596	8974707	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974596	8974707	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974708	8974808	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974809	8974954	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974809	8974954	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974955	8975049	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975050	8975142	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8975050	8975112	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000610:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	8975110	8975112	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=stop_codon:HG00642_ch_T0000610;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8975143	8975836	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=intron:HG00642_ch_T0000610:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975837	8976046	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000610;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000610;transcript_name=HG00642_ch_T0000610;gene_name=TSPY8;ID=exon:HG00642_ch_T0000610:6;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8973297	8976046	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_G0000180;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=HG00642_ch_T0000611;Name=TSPY8
HG00642_chrY	CAT	exon	8973297	8973782	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8973297	8973782	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000611:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	8973297	8973299	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=start_codon:HG00642_ch_T0000611;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8973783	8974389	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=intron:HG00642_ch_T0000611:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974390	8974467	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974390	8974467	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000611:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974468	8974595	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=intron:HG00642_ch_T0000611:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974596	8974707	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974596	8974707	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000611:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974708	8974808	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=intron:HG00642_ch_T0000611:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974809	8974954	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8974809	8974954	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000611:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974955	8975049	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=intron:HG00642_ch_T0000611:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975050	8975142	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8975050	8975112	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=CDS:HG00642_ch_T0000611:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	8975110	8975112	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=stop_codon:HG00642_ch_T0000611;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8975143	8975836	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=intron:HG00642_ch_T0000611:4;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975837	8976046	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1;transcript_id=HG00642_ch_T0000611;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000611;transcript_name=HG00642_ch_T0000611;gene_name=TSPY8;ID=exon:HG00642_ch_T0000611:5;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8973297	8976053	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_G0000180;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=HG00642_ch_T0000612;Name=TSPY8
HG00642_chrY	CAT	exon	8973297	8973782	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=exon:HG00642_ch_T0000612:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8973783	8974389	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=intron:HG00642_ch_T0000612:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974390	8974467	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=exon:HG00642_ch_T0000612:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974468	8974595	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=intron:HG00642_ch_T0000612:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8974596	8975142	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=exon:HG00642_ch_T0000612:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8975143	8975269	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=intron:HG00642_ch_T0000612:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975270	8976053	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1;transcript_id=HG00642_ch_T0000612;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000612;transcript_name=HG00642_ch_T0000612;gene_name=TSPY8;ID=exon:HG00642_ch_T0000612:3;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8974657	8976038	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_G0000180;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=HG00642_ch_T0000613;Name=TSPY8
HG00642_chrY	CAT	exon	8974657	8974954	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000613;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=exon:HG00642_ch_T0000613:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8974955	8975060	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000613;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=intron:HG00642_ch_T0000613:0;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975061	8975142	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000613;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=exon:HG00642_ch_T0000613:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8975143	8975836	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000613;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=intron:HG00642_ch_T0000613:1;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8975837	8976038	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00642_ch_T0000613;gene_id=HG00642_ch_G0000180;Parent=HG00642_ch_T0000613;transcript_name=HG00642_ch_T0000613;gene_name=TSPY8;ID=exon:HG00642_ch_T0000613:2;Name=TSPY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8983268	8990966	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_3;gene_id=HG00642_ch_G0000181;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000181;Name=FAM197Y9
HG00642_chrY	CAT	transcript	8983268	8990966	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_G0000181;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=HG00642_ch_T0000614;Name=FAM197Y9
HG00642_chrY	CAT	exon	8983268	8985395	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000614;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000614:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8985396	8988945	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000614;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000614:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8988946	8989031	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000614;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000614:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8989032	8990846	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000614;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000614:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8990847	8990966	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000614;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000614;transcript_name=HG00642_ch_T0000614;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000614:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8985336	8990948	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_G0000181;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=HG00642_ch_T0000615;Name=FAM197Y9
HG00642_chrY	CAT	exon	8985336	8985395	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000615:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8985396	8988945	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000615:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8988946	8989104	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000615:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8989105	8990614	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000615:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8990615	8990760	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000615:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8990761	8990846	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000615:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8990847	8990948	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000615;gene_id=HG00642_ch_G0000181;Parent=HG00642_ch_T0000615;transcript_name=HG00642_ch_T0000615;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000615:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8990615	8992610	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_3;gene_id=HG00642_ch_G0000182;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000182;Name=FAM197Y9
HG00642_chrY	CAT	transcript	8990615	8992610	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_G0000182;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=HG00642_ch_T0000616;Name=FAM197Y9
HG00642_chrY	CAT	exon	8990615	8990760	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_T0000616;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000616:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8990761	8990872	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_T0000616;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000616:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8990873	8990956	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_T0000616;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000616:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8990957	8992300	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_T0000616;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000616:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8992301	8992610	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000616;gene_id=HG00642_ch_G0000182;Parent=HG00642_ch_T0000616;transcript_name=HG00642_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000616:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	8993563	8996359	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00642_ch_G0000183;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00642_ch_G0000183;Name=TSPY10
HG00642_chrY	CAT	transcript	8993563	8996359	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_G0000183;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=HG00642_ch_T0000617;Name=TSPY10
HG00642_chrY	CAT	exon	8993563	8994094	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8993609	8994094	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	8993609	8993611	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000617;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994095	8994701	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=intron:HG00642_ch_T0000617:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994702	8994779	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8994702	8994779	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994780	8994907	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=intron:HG00642_ch_T0000617:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994908	8995019	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8994908	8995019	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995020	8995120	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=intron:HG00642_ch_T0000617:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995121	8995266	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8995121	8995266	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995267	8995372	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=intron:HG00642_ch_T0000617:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995373	8995454	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8995373	8995454	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995455	8996148	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=intron:HG00642_ch_T0000617:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8996149	8996359	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=exon:HG00642_ch_T0000617:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8996149	8996171	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000617:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	8996169	8996171	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000617;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000617;transcript_name=HG00642_ch_T0000617;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000617;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8993609	8996358	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_G0000183;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=HG00642_ch_T0000618;Name=TSPY10
HG00642_chrY	CAT	exon	8993609	8994094	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8993609	8994094	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000618:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	8993609	8993611	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000618;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994095	8994701	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=intron:HG00642_ch_T0000618:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994702	8994779	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8994702	8994779	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000618:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994780	8994907	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=intron:HG00642_ch_T0000618:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994908	8995019	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8994908	8995019	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000618:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995020	8995120	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=intron:HG00642_ch_T0000618:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995121	8995266	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8995121	8995266	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000618:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995267	8995361	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=intron:HG00642_ch_T0000618:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995362	8995454	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	8995362	8995424	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000618:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	8995422	8995424	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000618;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995455	8996148	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=intron:HG00642_ch_T0000618:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8996149	8996358	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000618;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000618;transcript_name=HG00642_ch_T0000618;gene_name=TSPY10;ID=exon:HG00642_ch_T0000618:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8993609	8996365	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_G0000183;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=HG00642_ch_T0000619;Name=TSPY10
HG00642_chrY	CAT	exon	8993609	8994094	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=exon:HG00642_ch_T0000619:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994095	8994701	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=intron:HG00642_ch_T0000619:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994702	8994779	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=exon:HG00642_ch_T0000619:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8994780	8994907	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=intron:HG00642_ch_T0000619:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8994908	8995454	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=exon:HG00642_ch_T0000619:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995455	8995581	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=intron:HG00642_ch_T0000619:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995582	8996365	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000619;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000619;transcript_name=HG00642_ch_T0000619;gene_name=TSPY10;ID=exon:HG00642_ch_T0000619:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	8994969	8996350	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_G0000183;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=HG00642_ch_T0000620;Name=TSPY10
HG00642_chrY	CAT	exon	8994969	8995266	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000620;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=exon:HG00642_ch_T0000620:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995267	8995372	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000620;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=intron:HG00642_ch_T0000620:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8995373	8995454	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000620;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=exon:HG00642_ch_T0000620:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	8995455	8996148	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000620;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=intron:HG00642_ch_T0000620:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	8996149	8996350	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000620;gene_id=HG00642_ch_G0000183;Parent=HG00642_ch_T0000620;transcript_name=HG00642_ch_T0000620;gene_name=TSPY10;ID=exon:HG00642_ch_T0000620:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9003584	9011481	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1_1;gene_id=HG00642_ch_G0000184;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00642_ch_G0000184;Name=FAM197Y8
HG00642_chrY	CAT	transcript	9003584	9011481	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_G0000184;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=HG00642_ch_T0000621;Name=FAM197Y8
HG00642_chrY	CAT	exon	9003584	9005711	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000621:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9005712	9009261	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000621:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9009262	9009347	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000621:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9009348	9011160	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000621:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9011161	9011270	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000621:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9011271	9011466	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000621:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9011467	9011481	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000621;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000621;transcript_name=HG00642_ch_T0000621;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000621:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9005651	9011262	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_G0000184;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=HG00642_ch_T0000622;Name=FAM197Y8
HG00642_chrY	CAT	exon	9005651	9005711	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000622:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9005712	9009261	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000622:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9009262	9009420	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000622:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9009421	9010928	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000622:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9010929	9011074	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000622:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9011075	9011160	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000622:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9011161	9011262	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000622;gene_id=HG00642_ch_G0000184;Parent=HG00642_ch_T0000622;transcript_name=HG00642_ch_T0000622;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000622:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9010926	9012894	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=HG00642_ch_G0000185;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00642_ch_G0000185;Name=FAM197Y8
HG00642_chrY	CAT	transcript	9010926	9012894	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_G0000185;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=HG00642_ch_T0000623;Name=FAM197Y8
HG00642_chrY	CAT	exon	9010926	9011074	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_T0000623;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000623:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9011075	9011160	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_T0000623;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000623:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9011161	9011270	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_T0000623;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000623:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9011271	9012593	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_T0000623;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000623:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9012594	9012894	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000623;gene_id=HG00642_ch_G0000185;Parent=HG00642_ch_T0000623;transcript_name=HG00642_ch_T0000623;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000623:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9013877	9016691	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;alternative_source_transcripts=ENST00000287721.13;gene_id=HG00642_ch_G0000186;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG00642_ch_G0000186;Name=TSPY4
HG00642_chrY	CAT	transcript	9013877	9016691	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_G0000186;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=HG00642_ch_T0000624;Name=TSPY4
HG00642_chrY	CAT	exon	9013877	9014426	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9013923	9014426	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9013923	9013925	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000624;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9014427	9015033	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=intron:HG00642_ch_T0000624:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015034	9015111	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015034	9015111	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015112	9015239	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=intron:HG00642_ch_T0000624:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015240	9015351	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015240	9015351	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015352	9015452	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=intron:HG00642_ch_T0000624:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015453	9015598	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015453	9015598	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015599	9015704	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=intron:HG00642_ch_T0000624:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015705	9015786	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015705	9015786	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015787	9016480	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=intron:HG00642_ch_T0000624:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9016481	9016691	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=exon:HG00642_ch_T0000624:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9016481	9016503	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000624:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9016501	9016503	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00642_ch_T0000624;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000624;transcript_name=HG00642_ch_T0000624;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000624;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9013877	9016570	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_G0000186;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=HG00642_ch_T0000625;Name=TSPY4
HG00642_chrY	CAT	exon	9013877	9014009	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9013923	9014009	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9013923	9013925	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000625;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9014010	9014288	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9014289	9014426	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9014289	9014426	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9014427	9015033	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015034	9015111	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015034	9015111	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015112	9015239	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015240	9015351	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015240	9015351	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015352	9015452	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015453	9015598	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015453	9015598	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015599	9015704	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015705	9015786	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015705	9015786	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015787	9016480	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=intron:HG00642_ch_T0000625:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9016481	9016570	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=exon:HG00642_ch_T0000625:6;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9016481	9016503	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000625:6;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9016501	9016503	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000625;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000625;transcript_name=HG00642_ch_T0000625;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000625;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9013923	9016690	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_G0000186;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=HG00642_ch_T0000626;Name=TSPY4
HG00642_chrY	CAT	exon	9013923	9014426	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9013923	9014426	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000626:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9013923	9013925	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000626;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9014427	9015033	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=intron:HG00642_ch_T0000626:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015034	9015111	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015034	9015111	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000626:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015112	9015239	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=intron:HG00642_ch_T0000626:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015240	9015351	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015240	9015351	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000626:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015352	9015452	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=intron:HG00642_ch_T0000626:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015453	9015598	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015453	9015598	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000626:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015599	9015693	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=intron:HG00642_ch_T0000626:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015694	9015786	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9015694	9015756	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000626:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9015754	9015756	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000626;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015787	9016480	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=intron:HG00642_ch_T0000626:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9016481	9016690	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00642_ch_T0000626;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000626;transcript_name=HG00642_ch_T0000626;gene_name=TSPY4;ID=exon:HG00642_ch_T0000626:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9013923	9016697	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_G0000186;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=HG00642_ch_T0000627;Name=TSPY4
HG00642_chrY	CAT	exon	9013923	9014426	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=exon:HG00642_ch_T0000627:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9014427	9015033	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=intron:HG00642_ch_T0000627:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015034	9015111	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=exon:HG00642_ch_T0000627:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015112	9015239	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=intron:HG00642_ch_T0000627:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015240	9015786	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=exon:HG00642_ch_T0000627:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015787	9015913	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=intron:HG00642_ch_T0000627:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015914	9016697	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00642_ch_T0000627;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000627;transcript_name=HG00642_ch_T0000627;gene_name=TSPY4;ID=exon:HG00642_ch_T0000627:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9015301	9016682	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_G0000186;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=HG00642_ch_T0000628;Name=TSPY4
HG00642_chrY	CAT	exon	9015301	9015598	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000628;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=exon:HG00642_ch_T0000628:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015599	9015693	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000628;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=intron:HG00642_ch_T0000628:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9015694	9015786	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000628;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=exon:HG00642_ch_T0000628:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9015787	9016480	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000628;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=intron:HG00642_ch_T0000628:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9016481	9016682	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000628;gene_id=HG00642_ch_G0000186;Parent=HG00642_ch_T0000628;transcript_name=HG00642_ch_T0000628;gene_name=TSPY4;ID=exon:HG00642_ch_T0000628:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9023890	9031769	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=HG00642_ch_G0000187;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00642_ch_G0000187;Name=FAM197Y8
HG00642_chrY	CAT	transcript	9023890	9031769	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_G0000187;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=HG00642_ch_T0000629;Name=FAM197Y8
HG00642_chrY	CAT	exon	9023890	9026018	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000629:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9026019	9029568	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000629:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9029569	9029654	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000629:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9029655	9031448	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000629:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9031449	9031558	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000629:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9031559	9031754	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000629:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9031755	9031769	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000629;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000629;transcript_name=HG00642_ch_T0000629;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000629:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9025958	9031550	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_G0000187;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=HG00642_ch_T0000630;Name=FAM197Y8
HG00642_chrY	CAT	exon	9025958	9026018	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000630:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9026019	9029568	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000630:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9029569	9029727	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000630:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9029728	9031216	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000630:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9031217	9031362	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000630:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9031363	9031448	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000630:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9031449	9031550	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000630;gene_id=HG00642_ch_G0000187;Parent=HG00642_ch_T0000630;transcript_name=HG00642_ch_T0000630;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000630:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9031214	9033180	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=HG00642_ch_G0000188;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00642_ch_G0000188;Name=FAM197Y8
HG00642_chrY	CAT	transcript	9031214	9033180	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_G0000188;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=HG00642_ch_T0000631;Name=FAM197Y8
HG00642_chrY	CAT	exon	9031214	9031362	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_T0000631;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9031363	9031448	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_T0000631;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9031449	9031558	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_T0000631;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9031559	9032879	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_T0000631;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=intron:HG00642_ch_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9032880	9033180	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00642_ch_T0000631;gene_id=HG00642_ch_G0000188;Parent=HG00642_ch_T0000631;transcript_name=HG00642_ch_T0000631;gene_name=FAM197Y8;ID=exon:HG00642_ch_T0000631:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9034167	9036972	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_1;gene_id=HG00642_ch_G0000189;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00642_ch_G0000189;Name=ENSG00000301844
HG00642_chrY	CAT	transcript	9034167	9036972	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=HG00642_ch_T0000632;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034167	9034695	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000632:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000632:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035620	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035621	9035721	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000632:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035722	9035867	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035973	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000632:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035974	9036055	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000632:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036972	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000632;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000632;transcript_name=HG00642_ch_T0000632;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000632:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034176	9036967	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=HG00642_ch_T0000633;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034176	9034695	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000633:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000633:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035620	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035621	9035728	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000633:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035729	9035867	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035973	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000633:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035974	9036055	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000633:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036967	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000633;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000633;transcript_name=HG00642_ch_T0000633;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000633:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034198	9036962	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=HG00642_ch_T0000634;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034198	9034695	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000634:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000634:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000634:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000634:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035620	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000634:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035621	9035721	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000634:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035722	9036055	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000634:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000634:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036962	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000634;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000634;transcript_name=HG00642_ch_T0000634;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000634:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034208	9036967	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=HG00642_ch_T0000635;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034208	9034695	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000635:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000635:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000635:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000635:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035867	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000635:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035973	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000635:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035974	9036055	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000635:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000635:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036967	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000635;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000635;transcript_name=HG00642_ch_T0000635;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000635:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034210	9036960	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=HG00642_ch_T0000636;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034210	9034695	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000636:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000636:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000636:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000636:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9036055	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000636:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000636:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036960	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000636;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000636;transcript_name=HG00642_ch_T0000636;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000636:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034210	9036967	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=HG00642_ch_T0000637;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034210	9034695	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000637:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000637:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035620	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035621	9035721	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000637:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035722	9035867	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035962	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000637:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035963	9036055	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000637:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036967	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000637;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000637;transcript_name=HG00642_ch_T0000637;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000637:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9034230	9036967	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_G0000189;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=HG00642_ch_T0000639;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9034230	9034695	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000639:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000639:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000639:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000639:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035867	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000639:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035962	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000639:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035963	9036055	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000639:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000639:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036967	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000639;gene_id=HG00642_ch_G0000189;Parent=HG00642_ch_T0000639;transcript_name=HG00642_ch_T0000639;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000639:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9034210	9036960	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_1;gene_id=HG00642_ch_G0000190;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00642_ch_G0000190;Name=TSPY7P
HG00642_chrY	CAT	transcript	9034210	9036960	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_G0000190;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=HG00642_ch_T0000638;Name=TSPY7P
HG00642_chrY	CAT	exon	9034210	9034695	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9034696	9035302	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000638:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035303	9035380	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035381	9035508	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000638:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035509	9035620	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035621	9035721	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000638:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035722	9035867	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9035868	9035973	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000638:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9035974	9036055	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9036056	9036749	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000638:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9036750	9036960	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000638;gene_id=HG00642_ch_G0000190;Parent=HG00642_ch_T0000638;transcript_name=HG00642_ch_T0000638;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000638:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9044199	9052079	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG00642_ch_G0000191;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00642_ch_G0000191;Name=FAM197Y7
HG00642_chrY	CAT	transcript	9044199	9052079	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_G0000191;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=HG00642_ch_T0000640;Name=FAM197Y7
HG00642_chrY	CAT	exon	9044199	9046312	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000640:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9046313	9049861	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000640:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9049862	9049947	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000640:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9049948	9051758	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000640:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9051759	9051868	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000640:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9051869	9052064	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000640:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9052065	9052079	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000640;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000640;transcript_name=HG00642_ch_T0000640;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000640:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9046253	9051860	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_G0000191;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=HG00642_ch_T0000641;Name=FAM197Y7
HG00642_chrY	CAT	exon	9046253	9046312	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000641:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9046313	9049861	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000641:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9049862	9050020	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000641:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9050021	9051526	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000641:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9051527	9051672	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000641:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9051673	9051758	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000641:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9051759	9051860	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000641;gene_id=HG00642_ch_G0000191;Parent=HG00642_ch_T0000641;transcript_name=HG00642_ch_T0000641;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000641:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9051527	9053519	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_2;gene_id=HG00642_ch_G0000192;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00642_ch_G0000192;Name=ENSG00000286120
HG00642_chrY	CAT	transcript	9051527	9053519	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000642;gene_id=HG00642_ch_G0000192;Parent=HG00642_ch_G0000192;transcript_name=HG00642_ch_T0000642;gene_name=ENSG00000286120;ID=HG00642_ch_T0000642;Name=ENSG00000286120
HG00642_chrY	CAT	exon	9051527	9051672	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000642;gene_id=HG00642_ch_G0000192;Parent=HG00642_ch_T0000642;transcript_name=HG00642_ch_T0000642;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000642:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9051673	9053208	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000642;gene_id=HG00642_ch_G0000192;Parent=HG00642_ch_T0000642;transcript_name=HG00642_ch_T0000642;gene_name=ENSG00000286120;ID=intron:HG00642_ch_T0000642:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9053209	9053519	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000642;gene_id=HG00642_ch_G0000192;Parent=HG00642_ch_T0000642;transcript_name=HG00642_ch_T0000642;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000642:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9066452	9072194	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_6;gene_id=HG00642_ch_G0000193;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000193;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9066452	9072194	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_G0000193;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=HG00642_ch_T0000643;Name=FAM197Y5
HG00642_chrY	CAT	exon	9066452	9066641	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000643;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000643:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9066642	9070191	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000643;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000643:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9070192	9070277	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000643;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000643:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9070278	9072080	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000643;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000643:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9072081	9072194	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000643;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000643;transcript_name=HG00642_ch_T0000643;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000643:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9066582	9072182	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_G0000193;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=HG00642_ch_T0000644;Name=FAM197Y5
HG00642_chrY	CAT	exon	9066582	9066641	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000644:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9066642	9070191	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000644:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9070192	9070350	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000644:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9070351	9071848	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000644:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9071849	9071994	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000644:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9071995	9072080	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000644:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9072081	9072182	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000644;gene_id=HG00642_ch_G0000193;Parent=HG00642_ch_T0000644;transcript_name=HG00642_ch_T0000644;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000644:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9071849	9073841	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_2;gene_id=HG00642_ch_G0000194;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000194;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9071849	9073841	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000645;gene_id=HG00642_ch_G0000194;Parent=HG00642_ch_G0000194;transcript_name=HG00642_ch_T0000645;gene_name=FAM197Y5;ID=HG00642_ch_T0000645;Name=FAM197Y5
HG00642_chrY	CAT	exon	9071849	9071994	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000645;gene_id=HG00642_ch_G0000194;Parent=HG00642_ch_T0000645;transcript_name=HG00642_ch_T0000645;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000645:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9071995	9073530	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000645;gene_id=HG00642_ch_G0000194;Parent=HG00642_ch_T0000645;transcript_name=HG00642_ch_T0000645;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000645:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9073531	9073841	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000645;gene_id=HG00642_ch_G0000194;Parent=HG00642_ch_T0000645;transcript_name=HG00642_ch_T0000645;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000645:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9074799	9077604	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG00642_ch_G0000195;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00642_ch_G0000195;Name=ENSG00000301844
HG00642_chrY	CAT	transcript	9074799	9077604	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=HG00642_ch_T0000646;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074799	9075327	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076252	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076253	9076353	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076354	9076499	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076605	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076606	9076687	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077604	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000646;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000646;transcript_name=HG00642_ch_T0000646;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000646:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074808	9077599	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=HG00642_ch_T0000647;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074808	9075327	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076252	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076253	9076360	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076361	9076499	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076605	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076606	9076687	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077599	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000647;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000647;transcript_name=HG00642_ch_T0000647;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000647:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074830	9077594	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=HG00642_ch_T0000648;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074830	9075327	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076252	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076253	9076353	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076354	9076687	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077594	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000648;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000648;transcript_name=HG00642_ch_T0000648;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000648:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074840	9077599	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=HG00642_ch_T0000649;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074840	9075327	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076499	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076605	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076606	9076687	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077599	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000649;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000649;transcript_name=HG00642_ch_T0000649;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000649:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074842	9077592	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=HG00642_ch_T0000650;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074842	9075327	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076687	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077592	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000650;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000650;transcript_name=HG00642_ch_T0000650;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000650:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074842	9077599	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=HG00642_ch_T0000651;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074842	9075327	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076252	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076253	9076353	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076354	9076499	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076594	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000651:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076595	9076687	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000651:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077599	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000651;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000651;transcript_name=HG00642_ch_T0000651;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000651:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9074862	9077599	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_G0000195;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=HG00642_ch_T0000653;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9074862	9075327	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076499	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076594	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076595	9076687	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077599	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000653;gene_id=HG00642_ch_G0000195;Parent=HG00642_ch_T0000653;transcript_name=HG00642_ch_T0000653;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000653:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9074842	9077592	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG00642_ch_G0000196;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00642_ch_G0000196;Name=TSPY7P
HG00642_chrY	CAT	transcript	9074842	9077592	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_G0000196;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=HG00642_ch_T0000652;Name=TSPY7P
HG00642_chrY	CAT	exon	9074842	9075327	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9075328	9075934	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9075935	9076012	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076013	9076140	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076141	9076252	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076253	9076353	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076354	9076499	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076500	9076605	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9076606	9076687	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9076688	9077381	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9077382	9077592	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000652;gene_id=HG00642_ch_G0000196;Parent=HG00642_ch_T0000652;transcript_name=HG00642_ch_T0000652;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000652:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9084827	9092696	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_1;gene_id=HG00642_ch_G0000197;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00642_ch_G0000197;Name=FAM197Y7
HG00642_chrY	CAT	transcript	9084827	9092696	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_G0000197;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=HG00642_ch_T0000654;Name=FAM197Y7
HG00642_chrY	CAT	exon	9084827	9086940	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9086941	9090484	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9090485	9090570	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9090571	9092375	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9092376	9092485	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9092486	9092681	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9092682	9092696	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000654;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000654;transcript_name=HG00642_ch_T0000654;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000654:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9086881	9092477	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_G0000197;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=HG00642_ch_T0000655;Name=FAM197Y7
HG00642_chrY	CAT	exon	9086881	9086940	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9086941	9090484	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9090485	9090643	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9090644	9092143	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9092144	9092289	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9092290	9092375	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9092376	9092477	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000655;gene_id=HG00642_ch_G0000197;Parent=HG00642_ch_T0000655;transcript_name=HG00642_ch_T0000655;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000655:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9092144	9094136	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=HG00642_ch_G0000198;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00642_ch_G0000198;Name=ENSG00000286120
HG00642_chrY	CAT	transcript	9092144	9094136	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000656;gene_id=HG00642_ch_G0000198;Parent=HG00642_ch_G0000198;transcript_name=HG00642_ch_T0000656;gene_name=ENSG00000286120;ID=HG00642_ch_T0000656;Name=ENSG00000286120
HG00642_chrY	CAT	exon	9092144	9092289	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000656;gene_id=HG00642_ch_G0000198;Parent=HG00642_ch_T0000656;transcript_name=HG00642_ch_T0000656;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9092290	9093825	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000656;gene_id=HG00642_ch_G0000198;Parent=HG00642_ch_T0000656;transcript_name=HG00642_ch_T0000656;gene_name=ENSG00000286120;ID=intron:HG00642_ch_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9093826	9094136	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000656;gene_id=HG00642_ch_G0000198;Parent=HG00642_ch_T0000656;transcript_name=HG00642_ch_T0000656;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000656:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9095090	9097886	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=HG00642_ch_G0000199;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00642_ch_G0000199;Name=TSPY3
HG00642_chrY	CAT	transcript	9095090	9097886	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_G0000199;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=HG00642_ch_T0000657;Name=TSPY3
HG00642_chrY	CAT	exon	9095090	9095621	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9095136	9095621	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9095136	9095138	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000657;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9095622	9096228	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=intron:HG00642_ch_T0000657:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096229	9096306	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096229	9096306	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096307	9096434	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=intron:HG00642_ch_T0000657:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096435	9096546	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096435	9096546	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096547	9096647	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=intron:HG00642_ch_T0000657:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096648	9096793	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096648	9096793	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096794	9096899	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=intron:HG00642_ch_T0000657:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096900	9096981	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096900	9096981	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096982	9097675	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=intron:HG00642_ch_T0000657:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9097676	9097886	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=exon:HG00642_ch_T0000657:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9097676	9097698	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000657:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9097696	9097698	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00642_ch_T0000657;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000657;transcript_name=HG00642_ch_T0000657;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000657;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9095136	9097885	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_G0000199;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=HG00642_ch_T0000658;Name=TSPY3
HG00642_chrY	CAT	exon	9095136	9095621	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9095136	9095621	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000658:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9095136	9095138	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000658;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9095622	9096228	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=intron:HG00642_ch_T0000658:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096229	9096306	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096229	9096306	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000658:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096307	9096434	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=intron:HG00642_ch_T0000658:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096435	9096546	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096435	9096546	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000658:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096547	9096647	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=intron:HG00642_ch_T0000658:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096648	9096793	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096648	9096793	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000658:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096794	9096888	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=intron:HG00642_ch_T0000658:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096889	9096981	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096889	9096951	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000658:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9096949	9096951	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000658;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096982	9097675	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=intron:HG00642_ch_T0000658:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9097676	9097885	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00642_ch_T0000658;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000658;transcript_name=HG00642_ch_T0000658;gene_name=TSPY3;ID=exon:HG00642_ch_T0000658:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9095136	9097698	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_G0000199;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=HG00642_ch_T0000659;Name=TSPY3
HG00642_chrY	CAT	exon	9095136	9095222	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9095136	9095222	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9095136	9095138	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000659;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9095223	9095483	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9095484	9095621	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9095484	9095621	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9095622	9096228	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096229	9096306	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096229	9096306	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096307	9096434	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096435	9096546	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096435	9096546	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096547	9096647	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096648	9096793	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096648	9096793	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096794	9096899	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096900	9096981	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9096900	9096981	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096982	9097675	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=intron:HG00642_ch_T0000659:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9097676	9097698	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=exon:HG00642_ch_T0000659:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9097676	9097698	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000659:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9097696	9097698	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00642_ch_T0000659;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000659;transcript_name=HG00642_ch_T0000659;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000659;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9095136	9097892	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_G0000199;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=HG00642_ch_T0000660;Name=TSPY3
HG00642_chrY	CAT	exon	9095136	9095621	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=exon:HG00642_ch_T0000660:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9095622	9096228	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=intron:HG00642_ch_T0000660:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096229	9096306	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=exon:HG00642_ch_T0000660:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096307	9096434	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=intron:HG00642_ch_T0000660:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096435	9096981	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=exon:HG00642_ch_T0000660:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096982	9097108	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=intron:HG00642_ch_T0000660:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9097109	9097892	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00642_ch_T0000660;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000660;transcript_name=HG00642_ch_T0000660;gene_name=TSPY3;ID=exon:HG00642_ch_T0000660:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9096496	9097877	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_G0000199;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=HG00642_ch_T0000661;Name=TSPY3
HG00642_chrY	CAT	exon	9096496	9096793	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000661;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=exon:HG00642_ch_T0000661:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096794	9096888	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000661;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=intron:HG00642_ch_T0000661:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9096889	9096981	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000661;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=exon:HG00642_ch_T0000661:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9096982	9097675	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000661;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=intron:HG00642_ch_T0000661:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9097676	9097877	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00642_ch_T0000661;gene_id=HG00642_ch_G0000199;Parent=HG00642_ch_T0000661;transcript_name=HG00642_ch_T0000661;gene_name=TSPY3;ID=exon:HG00642_ch_T0000661:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9105087	9112979	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG00642_ch_G0000200;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00642_ch_G0000200;Name=FAM197Y7
HG00642_chrY	CAT	transcript	9105087	9112979	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_G0000200;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=HG00642_ch_T0000662;Name=FAM197Y7
HG00642_chrY	CAT	exon	9105087	9107210	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000662:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9107211	9110761	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000662:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9110762	9110847	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000662:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9110848	9112658	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000662:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9112659	9112768	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000662:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9112769	9112964	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000662:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9112965	9112979	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000662;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000662;transcript_name=HG00642_ch_T0000662;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000662:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9107151	9112760	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_G0000200;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=HG00642_ch_T0000663;Name=FAM197Y7
HG00642_chrY	CAT	exon	9107151	9107210	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000663:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9107211	9110761	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000663:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9110762	9110920	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000663:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9110921	9112426	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000663:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9112427	9112572	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000663:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9112573	9112658	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=intron:HG00642_ch_T0000663:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9112659	9112760	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00642_ch_T0000663;gene_id=HG00642_ch_G0000200;Parent=HG00642_ch_T0000663;transcript_name=HG00642_ch_T0000663;gene_name=FAM197Y7;ID=exon:HG00642_ch_T0000663:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9112427	9114419	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=HG00642_ch_G0000201;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00642_ch_G0000201;Name=ENSG00000286120
HG00642_chrY	CAT	transcript	9112427	9114419	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000664;gene_id=HG00642_ch_G0000201;Parent=HG00642_ch_G0000201;transcript_name=HG00642_ch_T0000664;gene_name=ENSG00000286120;ID=HG00642_ch_T0000664;Name=ENSG00000286120
HG00642_chrY	CAT	exon	9112427	9112572	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000664;gene_id=HG00642_ch_G0000201;Parent=HG00642_ch_T0000664;transcript_name=HG00642_ch_T0000664;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000664:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9112573	9114108	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000664;gene_id=HG00642_ch_G0000201;Parent=HG00642_ch_T0000664;transcript_name=HG00642_ch_T0000664;gene_name=ENSG00000286120;ID=intron:HG00642_ch_T0000664:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9114109	9114419	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00642_ch_T0000664;gene_id=HG00642_ch_G0000201;Parent=HG00642_ch_T0000664;transcript_name=HG00642_ch_T0000664;gene_name=ENSG00000286120;ID=exon:HG00642_ch_T0000664:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9115414	9118182	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_2;gene_id=HG00642_ch_G0000202;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG00642_ch_G0000202;Name=ENSG00000293749
HG00642_chrY	CAT	transcript	9115414	9118182	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=HG00642_ch_T0000665;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115414	9115506	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115507	9115767	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9115768	9115905	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116931	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116932	9117077	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000665:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118182	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000665;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000665;transcript_name=HG00642_ch_T0000665;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000665:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9115426	9118170	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=HG00642_ch_T0000667;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115426	9115506	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115507	9115767	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9115768	9115905	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116938	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116939	9117077	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000667:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118170	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000667;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000667;transcript_name=HG00642_ch_T0000667;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000667:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9115435	9118177	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=HG00642_ch_T0000668;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115435	9115506	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115507	9115767	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9115768	9115905	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116931	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116932	9117077	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117172	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117173	9117265	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000668:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118177	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000668;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000668;transcript_name=HG00642_ch_T0000668;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000668:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9115637	9118175	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=HG00642_ch_T0000669;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115637	9115905	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000669:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000669:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116931	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000669:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116932	9117077	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000669:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000669:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118175	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000669;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000669;transcript_name=HG00642_ch_T0000669;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000669:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9115733	9118170	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=HG00642_ch_T0000670;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115733	9115905	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000670:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000670:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116938	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000670:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116939	9117077	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000670:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000670:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118170	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000670;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000670;transcript_name=HG00642_ch_T0000670;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000670:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9115859	9118181	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=HG00642_ch_T0000671;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9115859	9115961	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115962	9116530	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000671:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116531	9116590	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000671:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116931	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000671:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116932	9117077	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000671:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000671:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118181	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000671;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000671;transcript_name=HG00642_ch_T0000671;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000671:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9116560	9118168	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=HG00642_ch_T0000672;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9116560	9116590	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000672:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000672:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9117077	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000672:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000672:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000672:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000672:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118168	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000672;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000672;transcript_name=HG00642_ch_T0000672;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000672:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9117105	9118177	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000673;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_G0000202;transcript_name=HG00642_ch_T0000673;gene_name=ENSG00000293749;ID=HG00642_ch_T0000673;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9117105	9117265	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000673;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000673;transcript_name=HG00642_ch_T0000673;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000673:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000673;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000673;transcript_name=HG00642_ch_T0000673;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000673:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9118177	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000673;gene_id=HG00642_ch_G0000202;Parent=HG00642_ch_T0000673;transcript_name=HG00642_ch_T0000673;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000673:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9115420	9117982	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_1;gene_id=HG00642_ch_G0000203;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG00642_ch_G0000203;Name=TSPY6P
HG00642_chrY	CAT	transcript	9115420	9117982	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_G0000203;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=HG00642_ch_T0000666;Name=TSPY6P
HG00642_chrY	CAT	exon	9115420	9115630	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115631	9115638	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9115639	9115905	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9115906	9116512	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116513	9116590	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116591	9116718	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116719	9116830	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9116831	9116931	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9116932	9117077	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117078	9117183	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117184	9117265	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9117266	9117959	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000666:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9117960	9117982	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000666;gene_id=HG00642_ch_G0000203;Parent=HG00642_ch_T0000666;transcript_name=HG00642_ch_T0000666;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000666:6;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9125374	9133062	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_2;gene_id=HG00642_ch_G0000204;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000204;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9125374	9133062	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_G0000204;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=HG00642_ch_T0000674;Name=FAM197Y9
HG00642_chrY	CAT	exon	9125374	9127501	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000674;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000674:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9127502	9131049	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000674;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000674:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9131050	9131135	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000674;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000674:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9131136	9132942	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000674;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000674:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9132943	9133062	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000674;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000674;transcript_name=HG00642_ch_T0000674;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000674:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9127442	9133044	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_G0000204;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=HG00642_ch_T0000675;Name=FAM197Y9
HG00642_chrY	CAT	exon	9127442	9127501	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000675:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9127502	9131049	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000675:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9131050	9131208	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000675:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9131209	9132710	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000675:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9132711	9132856	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000675:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9132857	9132942	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000675:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9132943	9133044	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000675;gene_id=HG00642_ch_G0000204;Parent=HG00642_ch_T0000675;transcript_name=HG00642_ch_T0000675;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000675:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9132711	9134704	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_5;gene_id=HG00642_ch_G0000205;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000205;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9132711	9134704	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_G0000205;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=HG00642_ch_T0000676;Name=FAM197Y9
HG00642_chrY	CAT	exon	9132711	9132856	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_T0000676;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000676:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9132857	9132968	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_T0000676;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000676:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9132969	9133052	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_T0000676;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000676:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9133053	9134394	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_T0000676;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000676:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9134395	9134704	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000676;gene_id=HG00642_ch_G0000205;Parent=HG00642_ch_T0000676;transcript_name=HG00642_ch_T0000676;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000676:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9135653	9138449	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00642_ch_G0000206;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00642_ch_G0000206;Name=TSPY10
HG00642_chrY	CAT	transcript	9135653	9138449	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_G0000206;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=HG00642_ch_T0000677;Name=TSPY10
HG00642_chrY	CAT	exon	9135653	9136184	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9135699	9136184	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9135699	9135701	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000677;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136185	9136791	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=intron:HG00642_ch_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136792	9136869	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9136792	9136869	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136870	9136997	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=intron:HG00642_ch_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136998	9137109	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9136998	9137109	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137110	9137210	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=intron:HG00642_ch_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137211	9137356	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9137211	9137356	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137357	9137462	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=intron:HG00642_ch_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137463	9137544	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9137463	9137544	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137545	9138238	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=intron:HG00642_ch_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9138239	9138449	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=exon:HG00642_ch_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9138239	9138261	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9138259	9138261	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000677;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000677;transcript_name=HG00642_ch_T0000677;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000677;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9135699	9138448	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_G0000206;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=HG00642_ch_T0000678;Name=TSPY10
HG00642_chrY	CAT	exon	9135699	9136184	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9135699	9136184	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9135699	9135701	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000678;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136185	9136791	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=intron:HG00642_ch_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136792	9136869	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9136792	9136869	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136870	9136997	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=intron:HG00642_ch_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136998	9137109	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9136998	9137109	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137110	9137210	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=intron:HG00642_ch_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137211	9137356	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9137211	9137356	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137357	9137451	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=intron:HG00642_ch_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137452	9137544	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9137452	9137514	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9137512	9137514	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000678;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137545	9138238	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=intron:HG00642_ch_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9138239	9138448	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000678;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000678;transcript_name=HG00642_ch_T0000678;gene_name=TSPY10;ID=exon:HG00642_ch_T0000678:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9135699	9138455	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_G0000206;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=HG00642_ch_T0000679;Name=TSPY10
HG00642_chrY	CAT	exon	9135699	9136184	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=exon:HG00642_ch_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136185	9136791	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=intron:HG00642_ch_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136792	9136869	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=exon:HG00642_ch_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9136870	9136997	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=intron:HG00642_ch_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9136998	9137544	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=exon:HG00642_ch_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137545	9137671	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=intron:HG00642_ch_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137672	9138455	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000679;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000679;transcript_name=HG00642_ch_T0000679;gene_name=TSPY10;ID=exon:HG00642_ch_T0000679:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9137059	9138440	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_G0000206;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=HG00642_ch_T0000680;Name=TSPY10
HG00642_chrY	CAT	exon	9137059	9137356	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000680;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=exon:HG00642_ch_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137357	9137462	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000680;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=intron:HG00642_ch_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9137463	9137544	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000680;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=exon:HG00642_ch_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9137545	9138238	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000680;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=intron:HG00642_ch_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9138239	9138440	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000680;gene_id=HG00642_ch_G0000206;Parent=HG00642_ch_T0000680;transcript_name=HG00642_ch_T0000680;gene_name=TSPY10;ID=exon:HG00642_ch_T0000680:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9145657	9153347	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_1;gene_id=HG00642_ch_G0000207;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000207;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9145657	9153347	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_G0000207;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=HG00642_ch_T0000681;Name=FAM197Y9
HG00642_chrY	CAT	exon	9145657	9147784	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000681;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000681:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9147785	9151334	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000681;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000681:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9151335	9151420	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000681;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000681:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9151421	9153227	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000681;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000681:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9153228	9153347	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000681;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000681;transcript_name=HG00642_ch_T0000681;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000681:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9147725	9153329	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_G0000207;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=HG00642_ch_T0000682;Name=FAM197Y9
HG00642_chrY	CAT	exon	9147725	9147784	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000682:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9147785	9151334	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000682:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9151335	9151493	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000682:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9151494	9152995	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000682:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9152996	9153141	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000682:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9153142	9153227	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000682:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9153228	9153329	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000682;gene_id=HG00642_ch_G0000207;Parent=HG00642_ch_T0000682;transcript_name=HG00642_ch_T0000682;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000682:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9152996	9154989	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_4;gene_id=HG00642_ch_G0000208;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000208;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9152996	9154989	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_G0000208;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=HG00642_ch_T0000683;Name=FAM197Y9
HG00642_chrY	CAT	exon	9152996	9153141	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_T0000683;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000683:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9153142	9153253	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_T0000683;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000683:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9153254	9153337	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_T0000683;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000683:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9153338	9154679	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_T0000683;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000683:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9154680	9154989	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000683;gene_id=HG00642_ch_G0000208;Parent=HG00642_ch_T0000683;transcript_name=HG00642_ch_T0000683;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000683:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9155942	9158738	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00642_ch_G0000209;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00642_ch_G0000209;Name=TSPY10
HG00642_chrY	CAT	transcript	9155942	9158738	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_G0000209;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=HG00642_ch_T0000684;Name=TSPY10
HG00642_chrY	CAT	exon	9155942	9156473	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9155988	9156473	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9155988	9155990	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000684;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9156474	9157080	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=intron:HG00642_ch_T0000684:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157081	9157158	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157081	9157158	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157159	9157286	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=intron:HG00642_ch_T0000684:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157287	9157398	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157287	9157398	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157399	9157499	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=intron:HG00642_ch_T0000684:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157500	9157645	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157500	9157645	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157646	9157751	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=intron:HG00642_ch_T0000684:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157752	9157833	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157752	9157833	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157834	9158527	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=intron:HG00642_ch_T0000684:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9158528	9158738	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=exon:HG00642_ch_T0000684:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9158528	9158550	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000684:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9158548	9158550	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000684;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000684;transcript_name=HG00642_ch_T0000684;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000684;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9155988	9158737	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_G0000209;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=HG00642_ch_T0000685;Name=TSPY10
HG00642_chrY	CAT	exon	9155988	9156473	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9155988	9156473	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000685:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9155988	9155990	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000685;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9156474	9157080	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=intron:HG00642_ch_T0000685:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157081	9157158	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157081	9157158	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000685:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157159	9157286	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=intron:HG00642_ch_T0000685:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157287	9157398	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157287	9157398	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000685:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157399	9157499	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=intron:HG00642_ch_T0000685:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157500	9157645	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157500	9157645	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000685:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157646	9157740	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=intron:HG00642_ch_T0000685:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157741	9157833	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9157741	9157803	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000685:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9157801	9157803	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000685;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157834	9158527	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=intron:HG00642_ch_T0000685:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9158528	9158737	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000685;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000685;transcript_name=HG00642_ch_T0000685;gene_name=TSPY10;ID=exon:HG00642_ch_T0000685:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9155988	9158744	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_G0000209;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=HG00642_ch_T0000686;Name=TSPY10
HG00642_chrY	CAT	exon	9155988	9156473	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=exon:HG00642_ch_T0000686:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9156474	9157080	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=intron:HG00642_ch_T0000686:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157081	9157158	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=exon:HG00642_ch_T0000686:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157159	9157286	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=intron:HG00642_ch_T0000686:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157287	9157833	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=exon:HG00642_ch_T0000686:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157834	9157960	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=intron:HG00642_ch_T0000686:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157961	9158744	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000686;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000686;transcript_name=HG00642_ch_T0000686;gene_name=TSPY10;ID=exon:HG00642_ch_T0000686:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9157348	9158729	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_G0000209;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=HG00642_ch_T0000687;Name=TSPY10
HG00642_chrY	CAT	exon	9157348	9157645	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000687;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=exon:HG00642_ch_T0000687:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157646	9157751	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000687;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=intron:HG00642_ch_T0000687:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9157752	9157833	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000687;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=exon:HG00642_ch_T0000687:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9157834	9158527	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000687;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=intron:HG00642_ch_T0000687:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9158528	9158729	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000687;gene_id=HG00642_ch_G0000209;Parent=HG00642_ch_T0000687;transcript_name=HG00642_ch_T0000687;gene_name=TSPY10;ID=exon:HG00642_ch_T0000687:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9167869	9173604	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG00642_ch_G0000210;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000210;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9167869	9173604	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_G0000210;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=HG00642_ch_T0000688;Name=FAM197Y5
HG00642_chrY	CAT	exon	9167869	9168058	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000688;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000688:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9168059	9171607	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000688;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000688:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9171608	9171693	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000688;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000688:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9171694	9173490	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000688;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000688:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9173491	9173604	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000688;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000688;transcript_name=HG00642_ch_T0000688;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000688:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9167999	9173592	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_G0000210;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=HG00642_ch_T0000689;Name=FAM197Y5
HG00642_chrY	CAT	exon	9167999	9168058	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000689:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9168059	9171607	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000689:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9171608	9171766	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000689:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9171767	9173258	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000689:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9173259	9173404	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000689:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9173405	9173490	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000689:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9173491	9173592	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000689;gene_id=HG00642_ch_G0000210;Parent=HG00642_ch_T0000689;transcript_name=HG00642_ch_T0000689;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000689:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9173259	9175251	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=HG00642_ch_G0000211;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000211;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9173259	9175251	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000690;gene_id=HG00642_ch_G0000211;Parent=HG00642_ch_G0000211;transcript_name=HG00642_ch_T0000690;gene_name=FAM197Y5;ID=HG00642_ch_T0000690;Name=FAM197Y5
HG00642_chrY	CAT	exon	9173259	9173404	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000690;gene_id=HG00642_ch_G0000211;Parent=HG00642_ch_T0000690;transcript_name=HG00642_ch_T0000690;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000690:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9173405	9174940	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000690;gene_id=HG00642_ch_G0000211;Parent=HG00642_ch_T0000690;transcript_name=HG00642_ch_T0000690;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000690:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9174941	9175251	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000690;gene_id=HG00642_ch_G0000211;Parent=HG00642_ch_T0000690;transcript_name=HG00642_ch_T0000690;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000690:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9176205	9179019	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG00642_ch_G0000212;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG00642_ch_G0000212;Name=TSPY4
HG00642_chrY	CAT	transcript	9176205	9179019	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_G0000212;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=HG00642_ch_T0000691;Name=TSPY4
HG00642_chrY	CAT	exon	9176205	9176754	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9176251	9176754	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9176251	9176253	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000691;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9176755	9177361	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=intron:HG00642_ch_T0000691:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177362	9177439	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177362	9177439	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177440	9177567	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=intron:HG00642_ch_T0000691:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177568	9177679	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177568	9177679	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177680	9177780	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=intron:HG00642_ch_T0000691:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177781	9177926	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177781	9177926	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177927	9178032	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=intron:HG00642_ch_T0000691:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178033	9178114	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9178033	9178114	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9178115	9178808	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=intron:HG00642_ch_T0000691:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178809	9179019	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=exon:HG00642_ch_T0000691:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9178809	9178831	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000691:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9178829	9178831	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000691;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000691;transcript_name=HG00642_ch_T0000691;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000691;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9176205	9178898	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_G0000212;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=HG00642_ch_T0000692;Name=TSPY4
HG00642_chrY	CAT	exon	9176205	9176337	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9176251	9176337	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9176251	9176253	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000692;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9176338	9176616	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9176617	9176754	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9176617	9176754	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9176755	9177361	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177362	9177439	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177362	9177439	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177440	9177567	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177568	9177679	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177568	9177679	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177680	9177780	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177781	9177926	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177781	9177926	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177927	9178032	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178033	9178114	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9178033	9178114	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9178115	9178808	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=intron:HG00642_ch_T0000692:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178809	9178898	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=exon:HG00642_ch_T0000692:6;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9178809	9178831	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000692:6;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9178829	9178831	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000692;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000692;transcript_name=HG00642_ch_T0000692;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000692;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9176251	9179018	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_G0000212;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=HG00642_ch_T0000693;Name=TSPY4
HG00642_chrY	CAT	exon	9176251	9176754	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9176251	9176754	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000693:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9176251	9176253	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=start_codon:HG00642_ch_T0000693;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9176755	9177361	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=intron:HG00642_ch_T0000693:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177362	9177439	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177362	9177439	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000693:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177440	9177567	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=intron:HG00642_ch_T0000693:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177568	9177679	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177568	9177679	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000693:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177680	9177780	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=intron:HG00642_ch_T0000693:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177781	9177926	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9177781	9177926	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000693:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177927	9178021	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=intron:HG00642_ch_T0000693:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178022	9178114	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9178022	9178084	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=CDS:HG00642_ch_T0000693:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9178082	9178084	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=stop_codon:HG00642_ch_T0000693;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9178115	9178808	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=intron:HG00642_ch_T0000693:4;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178809	9179018	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000693;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000693;transcript_name=HG00642_ch_T0000693;gene_name=TSPY4;ID=exon:HG00642_ch_T0000693:5;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9176251	9179025	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_G0000212;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=HG00642_ch_T0000694;Name=TSPY4
HG00642_chrY	CAT	exon	9176251	9176754	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=exon:HG00642_ch_T0000694:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9176755	9177361	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=intron:HG00642_ch_T0000694:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177362	9177439	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=exon:HG00642_ch_T0000694:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177440	9177567	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=intron:HG00642_ch_T0000694:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9177568	9178114	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=exon:HG00642_ch_T0000694:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9178115	9178241	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=intron:HG00642_ch_T0000694:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178242	9179025	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000694;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000694;transcript_name=HG00642_ch_T0000694;gene_name=TSPY4;ID=exon:HG00642_ch_T0000694:3;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9177629	9179010	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_G0000212;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=HG00642_ch_T0000695;Name=TSPY4
HG00642_chrY	CAT	exon	9177629	9177926	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000695;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=exon:HG00642_ch_T0000695:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9177927	9178021	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000695;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=intron:HG00642_ch_T0000695:0;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178022	9178114	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000695;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=exon:HG00642_ch_T0000695:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9178115	9178808	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000695;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=intron:HG00642_ch_T0000695:1;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9178809	9179010	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00642_ch_T0000695;gene_id=HG00642_ch_G0000212;Parent=HG00642_ch_T0000695;transcript_name=HG00642_ch_T0000695;gene_name=TSPY4;ID=exon:HG00642_ch_T0000695:2;Name=TSPY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9188165	9193908	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_7;gene_id=HG00642_ch_G0000213;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000213;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9188165	9193908	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_G0000213;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=HG00642_ch_T0000696;Name=FAM197Y5
HG00642_chrY	CAT	exon	9188165	9188354	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000696;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000696:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9188355	9191903	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000696;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000696:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9191904	9191989	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000696;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000696:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9191990	9193794	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000696;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000696:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9193795	9193908	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000696;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000696;transcript_name=HG00642_ch_T0000696;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000696:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9188295	9193896	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_G0000213;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=HG00642_ch_T0000697;Name=FAM197Y5
HG00642_chrY	CAT	exon	9188295	9188354	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9188355	9191903	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9191904	9192062	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9192063	9193562	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9193563	9193708	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000697:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9193709	9193794	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000697:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9193795	9193896	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000697;gene_id=HG00642_ch_G0000213;Parent=HG00642_ch_T0000697;transcript_name=HG00642_ch_T0000697;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000697:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9193563	9195555	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_6;gene_id=HG00642_ch_G0000214;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000214;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9193563	9195555	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000698;gene_id=HG00642_ch_G0000214;Parent=HG00642_ch_G0000214;transcript_name=HG00642_ch_T0000698;gene_name=FAM197Y5;ID=HG00642_ch_T0000698;Name=FAM197Y5
HG00642_chrY	CAT	exon	9193563	9193708	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000698;gene_id=HG00642_ch_G0000214;Parent=HG00642_ch_T0000698;transcript_name=HG00642_ch_T0000698;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9193709	9195244	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000698;gene_id=HG00642_ch_G0000214;Parent=HG00642_ch_T0000698;transcript_name=HG00642_ch_T0000698;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9195245	9195555	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000698;gene_id=HG00642_ch_G0000214;Parent=HG00642_ch_T0000698;transcript_name=HG00642_ch_T0000698;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000698:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9196509	9199323	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00642_ch_G0000215;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00642_ch_G0000215;Name=TSPY9
HG00642_chrY	CAT	transcript	9196509	9199323	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_G0000215;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=HG00642_ch_T0000699;Name=TSPY9
HG00642_chrY	CAT	exon	9196509	9197058	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9196555	9197058	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9196555	9196557	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=start_codon:HG00642_ch_T0000699;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9197059	9197665	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=intron:HG00642_ch_T0000699:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9197666	9197743	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9197666	9197743	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9197744	9197871	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=intron:HG00642_ch_T0000699:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9197872	9197983	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9197872	9197983	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9197984	9198084	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=intron:HG00642_ch_T0000699:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9198085	9198230	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9198085	9198230	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9198231	9198336	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=intron:HG00642_ch_T0000699:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9198337	9198418	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9198337	9198418	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9198419	9199112	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=intron:HG00642_ch_T0000699:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9199113	9199323	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=exon:HG00642_ch_T0000699:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9199113	9199135	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000699:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9199133	9199135	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000699;gene_id=HG00642_ch_G0000215;Parent=HG00642_ch_T0000699;transcript_name=HG00642_ch_T0000699;gene_name=TSPY9;ID=stop_codon:HG00642_ch_T0000699;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9208526	9214274	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_5;gene_id=HG00642_ch_G0000216;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000216;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9208526	9214274	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_G0000216;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=HG00642_ch_T0000700;Name=FAM197Y5
HG00642_chrY	CAT	exon	9208526	9208715	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000700;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000700:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9208716	9212269	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000700;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000700:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9212270	9212355	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000700;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000700:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9212356	9214160	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000700;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000700:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9214161	9214274	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000700;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000700;transcript_name=HG00642_ch_T0000700;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000700:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9208656	9214262	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_G0000216;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=HG00642_ch_T0000701;Name=FAM197Y5
HG00642_chrY	CAT	exon	9208656	9208715	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000701:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9208716	9212269	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000701:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9212270	9212428	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000701:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9212429	9213928	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000701:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9213929	9214074	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000701:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9214075	9214160	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000701:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9214161	9214262	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000701;gene_id=HG00642_ch_G0000216;Parent=HG00642_ch_T0000701;transcript_name=HG00642_ch_T0000701;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000701:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9213929	9215921	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_1;gene_id=HG00642_ch_G0000217;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000217;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9213929	9215921	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000702;gene_id=HG00642_ch_G0000217;Parent=HG00642_ch_G0000217;transcript_name=HG00642_ch_T0000702;gene_name=FAM197Y5;ID=HG00642_ch_T0000702;Name=FAM197Y5
HG00642_chrY	CAT	exon	9213929	9214074	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000702;gene_id=HG00642_ch_G0000217;Parent=HG00642_ch_T0000702;transcript_name=HG00642_ch_T0000702;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000702:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9214075	9215610	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000702;gene_id=HG00642_ch_G0000217;Parent=HG00642_ch_T0000702;transcript_name=HG00642_ch_T0000702;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000702:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9215611	9215921	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000702;gene_id=HG00642_ch_G0000217;Parent=HG00642_ch_T0000702;transcript_name=HG00642_ch_T0000702;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000702:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9216878	9219683	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG00642_ch_G0000218;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00642_ch_G0000218;Name=ENSG00000301844
HG00642_chrY	CAT	transcript	9216878	9219683	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=HG00642_ch_T0000703;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216878	9217406	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000703:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000703:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218331	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218332	9218432	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000703:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218433	9218578	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218684	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000703:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218685	9218766	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000703:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219683	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000703;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000703;transcript_name=HG00642_ch_T0000703;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000703:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216887	9219678	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=HG00642_ch_T0000704;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216887	9217406	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000704:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000704:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218331	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218332	9218439	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000704:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218440	9218578	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218684	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000704:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218685	9218766	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000704:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219678	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000704;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000704;transcript_name=HG00642_ch_T0000704;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000704:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216909	9219673	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=HG00642_ch_T0000705;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216909	9217406	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000705:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000705:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000705:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000705:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218331	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000705:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218332	9218432	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000705:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218433	9218766	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000705:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000705:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219673	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000705;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000705;transcript_name=HG00642_ch_T0000705;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000705:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216919	9219678	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=HG00642_ch_T0000706;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216919	9217406	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000706:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000706:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000706:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000706:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218578	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000706:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218684	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000706:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218685	9218766	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000706:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000706:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219678	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000706;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000706;transcript_name=HG00642_ch_T0000706;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000706:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216921	9219671	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=HG00642_ch_T0000707;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216921	9217406	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000707:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000707:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000707:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000707:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218766	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000707:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000707:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219671	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000707;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000707;transcript_name=HG00642_ch_T0000707;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000707:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216921	9219678	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=HG00642_ch_T0000708;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216921	9217406	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000708:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000708:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218331	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218332	9218432	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000708:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218433	9218578	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218673	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000708:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218674	9218766	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000708:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219678	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000708;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000708;transcript_name=HG00642_ch_T0000708;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000708:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9216941	9219678	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_G0000218;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=HG00642_ch_T0000710;Name=ENSG00000301844
HG00642_chrY	CAT	exon	9216941	9217406	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000710:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000710:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000710:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000710:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218578	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000710:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218673	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000710:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218674	9218766	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000710:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=intron:HG00642_ch_T0000710:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219678	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00642_ch_T0000710;gene_id=HG00642_ch_G0000218;Parent=HG00642_ch_T0000710;transcript_name=HG00642_ch_T0000710;gene_name=ENSG00000301844;ID=exon:HG00642_ch_T0000710:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9216921	9219671	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG00642_ch_G0000219;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00642_ch_G0000219;Name=TSPY7P
HG00642_chrY	CAT	transcript	9216921	9219671	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_G0000219;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=HG00642_ch_T0000709;Name=TSPY7P
HG00642_chrY	CAT	exon	9216921	9217406	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9217407	9218013	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000709:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218014	9218091	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218092	9218219	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000709:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218220	9218331	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218332	9218432	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000709:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218433	9218578	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218579	9218684	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000709:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9218685	9218766	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9218767	9219460	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=intron:HG00642_ch_T0000709:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9219461	9219671	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00642_ch_T0000709;gene_id=HG00642_ch_G0000219;Parent=HG00642_ch_T0000709;transcript_name=HG00642_ch_T0000709;gene_name=TSPY7P;ID=exon:HG00642_ch_T0000709:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9226883	9234580	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_5;gene_id=HG00642_ch_G0000220;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000220;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9226883	9234580	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_G0000220;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=HG00642_ch_T0000711;Name=FAM197Y9
HG00642_chrY	CAT	exon	9226883	9229010	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000711;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000711:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9229011	9232561	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000711;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000711:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9232562	9232647	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000711;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000711:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9232648	9234460	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000711;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000711:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9234461	9234580	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000711;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000711;transcript_name=HG00642_ch_T0000711;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000711:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9228951	9234562	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_G0000220;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=HG00642_ch_T0000712;Name=FAM197Y9
HG00642_chrY	CAT	exon	9228951	9229010	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000712:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9229011	9232561	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000712:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9232562	9232720	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000712:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9232721	9234228	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000712:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9234229	9234374	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000712:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9234375	9234460	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000712:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9234461	9234562	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000712;gene_id=HG00642_ch_G0000220;Parent=HG00642_ch_T0000712;transcript_name=HG00642_ch_T0000712;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000712:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9234229	9236222	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_1;gene_id=HG00642_ch_G0000221;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000221;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9234229	9236222	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_G0000221;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=HG00642_ch_T0000713;Name=FAM197Y9
HG00642_chrY	CAT	exon	9234229	9234374	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_T0000713;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000713:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9234375	9234486	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_T0000713;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000713:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9234487	9234570	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_T0000713;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000713:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9234571	9235912	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_T0000713;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000713:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9235913	9236222	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000713;gene_id=HG00642_ch_G0000221;Parent=HG00642_ch_T0000713;transcript_name=HG00642_ch_T0000713;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000713:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9237215	9239983	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_3;gene_id=HG00642_ch_G0000222;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG00642_ch_G0000222;Name=ENSG00000293749
HG00642_chrY	CAT	transcript	9237215	9239983	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=HG00642_ch_T0000714;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237215	9237307	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237308	9237568	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9237569	9237706	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238732	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238733	9238878	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000714:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239983	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000714;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000714;transcript_name=HG00642_ch_T0000714;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000714:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9237227	9239971	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=HG00642_ch_T0000716;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237227	9237307	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237308	9237568	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9237569	9237706	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238739	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238740	9238878	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000716:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239971	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000716;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000716;transcript_name=HG00642_ch_T0000716;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000716:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9237236	9239978	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=HG00642_ch_T0000717;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237236	9237307	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237308	9237568	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9237569	9237706	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238732	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238733	9238878	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238973	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238974	9239066	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000717:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239978	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000717;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000717;transcript_name=HG00642_ch_T0000717;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000717:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9237438	9239976	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=HG00642_ch_T0000718;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237438	9237706	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000718:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000718:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238732	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000718:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238733	9238878	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000718:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000718:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239976	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000718;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000718;transcript_name=HG00642_ch_T0000718;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000718:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9237534	9239971	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=HG00642_ch_T0000719;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237534	9237706	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000719:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000719:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238739	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000719:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238740	9238878	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000719:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000719:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239971	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000719;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000719;transcript_name=HG00642_ch_T0000719;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000719:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9237660	9239982	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=HG00642_ch_T0000720;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9237660	9237762	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237763	9238331	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000720:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238332	9238391	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000720:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238732	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000720:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238733	9238878	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000720:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000720:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239982	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000720;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000720;transcript_name=HG00642_ch_T0000720;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000720:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9238361	9239969	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=HG00642_ch_T0000721;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9238361	9238391	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000721:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000721:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238878	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000721:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000721:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000721:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000721:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239969	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000721;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000721;transcript_name=HG00642_ch_T0000721;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000721:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9238906	9239978	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000722;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_G0000222;transcript_name=HG00642_ch_T0000722;gene_name=ENSG00000293749;ID=HG00642_ch_T0000722;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9238906	9239066	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000722;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000722;transcript_name=HG00642_ch_T0000722;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000722:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000722;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000722;transcript_name=HG00642_ch_T0000722;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000722:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239978	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000722;gene_id=HG00642_ch_G0000222;Parent=HG00642_ch_T0000722;transcript_name=HG00642_ch_T0000722;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000722:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9237221	9239783	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_3;gene_id=HG00642_ch_G0000223;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG00642_ch_G0000223;Name=TSPY6P
HG00642_chrY	CAT	transcript	9237221	9239783	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_G0000223;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=HG00642_ch_T0000715;Name=TSPY6P
HG00642_chrY	CAT	exon	9237221	9237431	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237432	9237439	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9237440	9237706	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9237707	9238313	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238314	9238391	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238392	9238519	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238520	9238631	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238632	9238732	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238733	9238878	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9238879	9238984	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9238985	9239066	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9239067	9239760	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000715:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9239761	9239783	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000715;gene_id=HG00642_ch_G0000223;Parent=HG00642_ch_T0000715;transcript_name=HG00642_ch_T0000715;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000715:6;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9249112	9254864	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_1;gene_id=HG00642_ch_G0000224;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000224;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9249112	9254864	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_G0000224;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=HG00642_ch_T0000723;Name=FAM197Y5
HG00642_chrY	CAT	exon	9249112	9249301	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000723;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000723:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9249302	9252851	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000723;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000723:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9252852	9252937	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000723;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000723:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9252938	9254750	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000723;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000723:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9254751	9254864	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000723;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000723;transcript_name=HG00642_ch_T0000723;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000723:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9249242	9254852	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_G0000224;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=HG00642_ch_T0000724;Name=FAM197Y5
HG00642_chrY	CAT	exon	9249242	9249301	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000724:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9249302	9252851	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000724:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9252852	9253010	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000724:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9253011	9254518	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000724:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9254519	9254664	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000724:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9254665	9254750	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000724:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9254751	9254852	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000724;gene_id=HG00642_ch_G0000224;Parent=HG00642_ch_T0000724;transcript_name=HG00642_ch_T0000724;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000724:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9254519	9256511	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_4;gene_id=HG00642_ch_G0000225;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000225;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9254519	9256511	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000725;gene_id=HG00642_ch_G0000225;Parent=HG00642_ch_G0000225;transcript_name=HG00642_ch_T0000725;gene_name=FAM197Y5;ID=HG00642_ch_T0000725;Name=FAM197Y5
HG00642_chrY	CAT	exon	9254519	9254664	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000725;gene_id=HG00642_ch_G0000225;Parent=HG00642_ch_T0000725;transcript_name=HG00642_ch_T0000725;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000725:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9254665	9256200	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000725;gene_id=HG00642_ch_G0000225;Parent=HG00642_ch_T0000725;transcript_name=HG00642_ch_T0000725;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000725:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9256201	9256511	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000725;gene_id=HG00642_ch_G0000225;Parent=HG00642_ch_T0000725;transcript_name=HG00642_ch_T0000725;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000725:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9257465	9260261	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;gene_id=HG00642_ch_G0000226;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00642_ch_G0000226;Name=TSPY10
HG00642_chrY	CAT	transcript	9257465	9260261	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_G0000226;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=HG00642_ch_T0000726;Name=TSPY10
HG00642_chrY	CAT	exon	9257465	9257996	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9257511	9257996	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9257511	9257513	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000726;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9257997	9258603	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=intron:HG00642_ch_T0000726:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258604	9258681	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9258604	9258681	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9258682	9258809	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=intron:HG00642_ch_T0000726:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258810	9258921	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9258810	9258921	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9258922	9259022	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=intron:HG00642_ch_T0000726:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259023	9259168	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9259023	9259168	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259169	9259274	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=intron:HG00642_ch_T0000726:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259275	9259356	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9259275	9259356	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259357	9260050	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=intron:HG00642_ch_T0000726:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9260051	9260261	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=exon:HG00642_ch_T0000726:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9260051	9260073	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000726:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9260071	9260073	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6,ENST00000440215.5;transcript_id=HG00642_ch_T0000726;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000726;transcript_name=HG00642_ch_T0000726;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000726;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9257511	9260260	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_G0000226;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=HG00642_ch_T0000727;Name=TSPY10
HG00642_chrY	CAT	exon	9257511	9257996	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9257511	9257996	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000727:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9257511	9257513	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000727;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9257997	9258603	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=intron:HG00642_ch_T0000727:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258604	9258681	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9258604	9258681	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000727:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9258682	9258809	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=intron:HG00642_ch_T0000727:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258810	9258921	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9258810	9258921	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000727:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9258922	9259022	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=intron:HG00642_ch_T0000727:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259023	9259168	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9259023	9259168	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000727:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259169	9259263	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=intron:HG00642_ch_T0000727:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259264	9259356	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9259264	9259326	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000727:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9259324	9259326	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000727;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259357	9260050	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=intron:HG00642_ch_T0000727:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9260051	9260260	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000727;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000727;transcript_name=HG00642_ch_T0000727;gene_name=TSPY10;ID=exon:HG00642_ch_T0000727:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9257511	9260267	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_G0000226;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=HG00642_ch_T0000728;Name=TSPY10
HG00642_chrY	CAT	exon	9257511	9257996	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=exon:HG00642_ch_T0000728:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9257997	9258603	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=intron:HG00642_ch_T0000728:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258604	9258681	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=exon:HG00642_ch_T0000728:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9258682	9258809	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=intron:HG00642_ch_T0000728:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9258810	9259356	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=exon:HG00642_ch_T0000728:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259357	9259483	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=intron:HG00642_ch_T0000728:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259484	9260267	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000728;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000728;transcript_name=HG00642_ch_T0000728;gene_name=TSPY10;ID=exon:HG00642_ch_T0000728:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9258871	9260252	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_G0000226;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=HG00642_ch_T0000729;Name=TSPY10
HG00642_chrY	CAT	exon	9258871	9259168	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000729;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=exon:HG00642_ch_T0000729:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259169	9259274	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000729;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=intron:HG00642_ch_T0000729:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9259275	9259356	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000729;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=exon:HG00642_ch_T0000729:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9259357	9260050	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000729;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=intron:HG00642_ch_T0000729:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9260051	9260252	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000729;gene_id=HG00642_ch_G0000226;Parent=HG00642_ch_T0000729;transcript_name=HG00642_ch_T0000729;gene_name=TSPY10;ID=exon:HG00642_ch_T0000729:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9269418	9275166	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_4;gene_id=HG00642_ch_G0000227;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000227;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9269418	9275166	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_G0000227;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=HG00642_ch_T0000730;Name=FAM197Y5
HG00642_chrY	CAT	exon	9269418	9269607	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000730;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000730:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9269608	9273161	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000730;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000730:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9273162	9273247	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000730;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000730:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9273248	9275052	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000730;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000730:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9275053	9275166	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000730;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000730;transcript_name=HG00642_ch_T0000730;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000730:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9269548	9275154	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_G0000227;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=HG00642_ch_T0000731;Name=FAM197Y5
HG00642_chrY	CAT	exon	9269548	9269607	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000731:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9269608	9273161	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000731:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9273162	9273320	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000731:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9273321	9274820	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000731:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9274821	9274966	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000731:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9274967	9275052	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000731:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9275053	9275154	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000731;gene_id=HG00642_ch_G0000227;Parent=HG00642_ch_T0000731;transcript_name=HG00642_ch_T0000731;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000731:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9274821	9276813	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_3;gene_id=HG00642_ch_G0000228;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000228;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9274821	9276813	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000732;gene_id=HG00642_ch_G0000228;Parent=HG00642_ch_G0000228;transcript_name=HG00642_ch_T0000732;gene_name=FAM197Y5;ID=HG00642_ch_T0000732;Name=FAM197Y5
HG00642_chrY	CAT	exon	9274821	9274966	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000732;gene_id=HG00642_ch_G0000228;Parent=HG00642_ch_T0000732;transcript_name=HG00642_ch_T0000732;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000732:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9274967	9276502	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000732;gene_id=HG00642_ch_G0000228;Parent=HG00642_ch_T0000732;transcript_name=HG00642_ch_T0000732;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000732:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9276503	9276813	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000732;gene_id=HG00642_ch_G0000228;Parent=HG00642_ch_T0000732;transcript_name=HG00642_ch_T0000732;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000732:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9277767	9280581	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;alternative_source_transcripts=ENST00000440215.5;gene_id=HG00642_ch_G0000229;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00642_ch_G0000229;Name=TSPY9
HG00642_chrY	CAT	transcript	9277767	9280581	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_G0000229;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=HG00642_ch_T0000733;Name=TSPY9
HG00642_chrY	CAT	exon	9277767	9278316	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9277813	9278316	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9277813	9277815	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=start_codon:HG00642_ch_T0000733;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9278317	9278923	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=intron:HG00642_ch_T0000733:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9278924	9279001	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9278924	9279001	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9279002	9279129	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=intron:HG00642_ch_T0000733:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9279130	9279241	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9279130	9279241	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9279242	9279342	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=intron:HG00642_ch_T0000733:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9279343	9279488	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9279343	9279488	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9279489	9279594	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=intron:HG00642_ch_T0000733:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9279595	9279676	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9279595	9279676	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9279677	9280370	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=intron:HG00642_ch_T0000733:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9280371	9280581	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=exon:HG00642_ch_T0000733:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9280371	9280393	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000733:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9280391	9280393	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00642_ch_T0000733;gene_id=HG00642_ch_G0000229;Parent=HG00642_ch_T0000733;transcript_name=HG00642_ch_T0000733;gene_name=TSPY9;ID=stop_codon:HG00642_ch_T0000733;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9287783	9295482	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=HG00642_ch_G0000230;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000230;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9287783	9295482	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_G0000230;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=HG00642_ch_T0000734;Name=FAM197Y9
HG00642_chrY	CAT	exon	9287783	9289912	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000734;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000734:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9289913	9293463	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000734;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000734:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9293464	9293549	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000734;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000734:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9293550	9295362	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000734;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000734:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9295363	9295482	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000734;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000734;transcript_name=HG00642_ch_T0000734;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000734:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9289853	9295464	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_G0000230;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=HG00642_ch_T0000735;Name=FAM197Y9
HG00642_chrY	CAT	exon	9289853	9289912	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000735:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9289913	9293463	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000735:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9293464	9293622	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000735:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9293623	9295130	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000735:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9295131	9295276	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000735:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9295277	9295362	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000735:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9295363	9295464	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000735;gene_id=HG00642_ch_G0000230;Parent=HG00642_ch_T0000735;transcript_name=HG00642_ch_T0000735;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000735:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9295131	9297124	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=HG00642_ch_G0000231;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00642_ch_G0000231;Name=FAM197Y9
HG00642_chrY	CAT	transcript	9295131	9297124	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_G0000231;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=HG00642_ch_T0000736;Name=FAM197Y9
HG00642_chrY	CAT	exon	9295131	9295276	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_T0000736;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000736:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9295277	9295388	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_T0000736;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000736:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9295389	9295472	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_T0000736;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000736:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9295473	9296814	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_T0000736;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=intron:HG00642_ch_T0000736:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9296815	9297124	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00642_ch_T0000736;gene_id=HG00642_ch_G0000231;Parent=HG00642_ch_T0000736;transcript_name=HG00642_ch_T0000736;gene_name=FAM197Y9;ID=exon:HG00642_ch_T0000736:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9298077	9300873	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00642_ch_G0000232;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00642_ch_G0000232;Name=TSPY10
HG00642_chrY	CAT	transcript	9298077	9300873	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_G0000232;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=HG00642_ch_T0000737;Name=TSPY10
HG00642_chrY	CAT	exon	9298077	9298608	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9298123	9298608	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9298123	9298125	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000737;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9298609	9299215	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=intron:HG00642_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299216	9299293	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299216	9299293	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299294	9299421	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=intron:HG00642_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299422	9299533	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299422	9299533	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299534	9299634	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=intron:HG00642_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299635	9299780	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299635	9299780	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299781	9299886	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=intron:HG00642_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299887	9299968	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299887	9299968	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299969	9300662	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=intron:HG00642_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9300663	9300873	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=exon:HG00642_ch_T0000737:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9300663	9300685	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000737:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9300683	9300685	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000737;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000737;transcript_name=HG00642_ch_T0000737;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000737;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9298123	9300872	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_G0000232;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=HG00642_ch_T0000738;Name=TSPY10
HG00642_chrY	CAT	exon	9298123	9298608	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9298123	9298608	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000738:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9298123	9298125	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=start_codon:HG00642_ch_T0000738;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9298609	9299215	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=intron:HG00642_ch_T0000738:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299216	9299293	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299216	9299293	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000738:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299294	9299421	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=intron:HG00642_ch_T0000738:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299422	9299533	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299422	9299533	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000738:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299534	9299634	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=intron:HG00642_ch_T0000738:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299635	9299780	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299635	9299780	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000738:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299781	9299875	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=intron:HG00642_ch_T0000738:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299876	9299968	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9299876	9299938	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=CDS:HG00642_ch_T0000738:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9299936	9299938	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=stop_codon:HG00642_ch_T0000738;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299969	9300662	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=intron:HG00642_ch_T0000738:4;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9300663	9300872	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000738;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000738;transcript_name=HG00642_ch_T0000738;gene_name=TSPY10;ID=exon:HG00642_ch_T0000738:5;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9298123	9300879	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_G0000232;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=HG00642_ch_T0000739;Name=TSPY10
HG00642_chrY	CAT	exon	9298123	9298608	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=exon:HG00642_ch_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9298609	9299215	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=intron:HG00642_ch_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299216	9299293	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=exon:HG00642_ch_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299294	9299421	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=intron:HG00642_ch_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299422	9299968	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=exon:HG00642_ch_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299969	9300095	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=intron:HG00642_ch_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9300096	9300879	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000739;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000739;transcript_name=HG00642_ch_T0000739;gene_name=TSPY10;ID=exon:HG00642_ch_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9299483	9300864	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_G0000232;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=HG00642_ch_T0000740;Name=TSPY10
HG00642_chrY	CAT	exon	9299483	9299780	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000740;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=exon:HG00642_ch_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299781	9299886	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000740;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=intron:HG00642_ch_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9299887	9299968	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000740;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=exon:HG00642_ch_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9299969	9300662	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000740;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=intron:HG00642_ch_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9300663	9300864	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00642_ch_T0000740;gene_id=HG00642_ch_G0000232;Parent=HG00642_ch_T0000740;transcript_name=HG00642_ch_T0000740;gene_name=TSPY10;ID=exon:HG00642_ch_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9310142	9315743	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1_1;gene_id=HG00642_ch_G0000233;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00642_ch_G0000233;Name=FAM197Y4
HG00642_chrY	CAT	transcript	9310142	9315743	1000	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_G0000233;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=HG00642_ch_T0000741;Name=FAM197Y4
HG00642_chrY	CAT	exon	9310142	9310201	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000741:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9310202	9313752	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000741:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9313753	9313911	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000741:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9313912	9315409	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000741:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9315410	9315555	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000741:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9315556	9315641	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000741:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9315642	9315743	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000741;gene_id=HG00642_ch_G0000233;Parent=HG00642_ch_T0000741;transcript_name=HG00642_ch_T0000741;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000741:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9315410	9317402	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=HG00642_ch_G0000234;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00642_ch_G0000234;Name=FAM197Y4
HG00642_chrY	CAT	transcript	9315410	9317402	1000	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000742;gene_id=HG00642_ch_G0000234;Parent=HG00642_ch_G0000234;transcript_name=HG00642_ch_T0000742;gene_name=FAM197Y4;ID=HG00642_ch_T0000742;Name=FAM197Y4
HG00642_chrY	CAT	exon	9315410	9315555	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000742;gene_id=HG00642_ch_G0000234;Parent=HG00642_ch_T0000742;transcript_name=HG00642_ch_T0000742;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000742:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9315556	9317091	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000742;gene_id=HG00642_ch_G0000234;Parent=HG00642_ch_T0000742;transcript_name=HG00642_ch_T0000742;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000742:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9317092	9317402	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000742;gene_id=HG00642_ch_G0000234;Parent=HG00642_ch_T0000742;transcript_name=HG00642_ch_T0000742;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000742:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9318356	9321153	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000428845.6;gene_id=HG00642_ch_G0000235;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00642_ch_G0000235;Name=TSPY3
HG00642_chrY	CAT	transcript	9318356	9321153	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_G0000235;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=HG00642_ch_T0000743;Name=TSPY3
HG00642_chrY	CAT	exon	9318356	9318887	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9318402	9318887	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9318402	9318404	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000743;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9318888	9319494	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=intron:HG00642_ch_T0000743:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319495	9319572	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319495	9319572	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319573	9319700	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=intron:HG00642_ch_T0000743:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319701	9319812	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319701	9319812	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319813	9319913	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=intron:HG00642_ch_T0000743:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319914	9320059	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319914	9320059	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320060	9320165	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=intron:HG00642_ch_T0000743:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320166	9320247	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9320166	9320247	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320248	9320941	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=intron:HG00642_ch_T0000743:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320942	9321153	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=exon:HG00642_ch_T0000743:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9320942	9320964	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000743:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9320962	9320964	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000743;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000743;transcript_name=HG00642_ch_T0000743;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000743;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9318402	9321152	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_G0000235;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=HG00642_ch_T0000744;Name=TSPY3
HG00642_chrY	CAT	exon	9318402	9318887	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9318402	9318887	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000744:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9318402	9318404	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000744;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9318888	9319494	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=intron:HG00642_ch_T0000744:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319495	9319572	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319495	9319572	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000744:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319573	9319700	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=intron:HG00642_ch_T0000744:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319701	9319812	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319701	9319812	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000744:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319813	9319913	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=intron:HG00642_ch_T0000744:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319914	9320059	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319914	9320059	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000744:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320060	9320154	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=intron:HG00642_ch_T0000744:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320155	9320247	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9320155	9320217	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000744:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9320215	9320217	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000744;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320248	9320941	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=intron:HG00642_ch_T0000744:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320942	9321152	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00642_ch_T0000744;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000744;transcript_name=HG00642_ch_T0000744;gene_name=TSPY3;ID=exon:HG00642_ch_T0000744:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9318402	9320964	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_G0000235;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=HG00642_ch_T0000745;Name=TSPY3
HG00642_chrY	CAT	exon	9318402	9318488	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9318402	9318488	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9318402	9318404	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000745;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9318489	9318749	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9318750	9318887	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9318750	9318887	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9318888	9319494	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319495	9319572	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319495	9319572	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319573	9319700	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319701	9319812	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319701	9319812	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319813	9319913	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319914	9320059	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9319914	9320059	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320060	9320165	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320166	9320247	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9320166	9320247	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320248	9320941	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=intron:HG00642_ch_T0000745:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320942	9320964	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=exon:HG00642_ch_T0000745:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9320942	9320964	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000745:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9320962	9320964	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000745;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000745;transcript_name=HG00642_ch_T0000745;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000745;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9318402	9321159	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_G0000235;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=HG00642_ch_T0000746;Name=TSPY3
HG00642_chrY	CAT	exon	9318402	9318887	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=exon:HG00642_ch_T0000746:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9318888	9319494	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=intron:HG00642_ch_T0000746:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319495	9319572	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=exon:HG00642_ch_T0000746:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9319573	9319700	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=intron:HG00642_ch_T0000746:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9319701	9320247	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=exon:HG00642_ch_T0000746:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320248	9320374	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=intron:HG00642_ch_T0000746:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320375	9321159	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00642_ch_T0000746;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000746;transcript_name=HG00642_ch_T0000746;gene_name=TSPY3;ID=exon:HG00642_ch_T0000746:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9319762	9321144	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_G0000235;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=HG00642_ch_T0000747;Name=TSPY3
HG00642_chrY	CAT	exon	9319762	9320059	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000747;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=exon:HG00642_ch_T0000747:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320060	9320154	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000747;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=intron:HG00642_ch_T0000747:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320155	9320247	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000747;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=exon:HG00642_ch_T0000747:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9320248	9320941	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000747;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=intron:HG00642_ch_T0000747:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9320942	9321144	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000747;gene_id=HG00642_ch_G0000235;Parent=HG00642_ch_T0000747;transcript_name=HG00642_ch_T0000747;gene_name=TSPY3;ID=exon:HG00642_ch_T0000747:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9328386	9336269	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=HG00642_ch_G0000236;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG00642_ch_G0000236;Name=FAM197Y6
HG00642_chrY	CAT	transcript	9328386	9336269	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_G0000236;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=HG00642_ch_T0000748;Name=FAM197Y6
HG00642_chrY	CAT	exon	9328386	9330514	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000748:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9330515	9334061	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000748:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9334062	9334147	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000748:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9334148	9335948	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000748:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9335949	9336058	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000748:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9336059	9336254	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000748:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9336255	9336269	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000748;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000748;transcript_name=HG00642_ch_T0000748;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000748:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9330455	9336050	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_G0000236;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=HG00642_ch_T0000749;Name=FAM197Y6
HG00642_chrY	CAT	exon	9330455	9330514	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000749:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9330515	9334061	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000749:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9334062	9334220	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000749:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9334221	9335716	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000749:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9335717	9335862	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000749:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9335863	9335948	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000749:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9335949	9336050	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000749;gene_id=HG00642_ch_G0000236;Parent=HG00642_ch_T0000749;transcript_name=HG00642_ch_T0000749;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000749:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9335717	9337709	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=HG00642_ch_G0000237;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=HG00642_ch_G0000237;Name=ENSG00000286173
HG00642_chrY	CAT	transcript	9335717	9337709	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000750;gene_id=HG00642_ch_G0000237;Parent=HG00642_ch_G0000237;transcript_name=HG00642_ch_T0000750;gene_name=ENSG00000286173;ID=HG00642_ch_T0000750;Name=ENSG00000286173
HG00642_chrY	CAT	exon	9335717	9335862	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000750;gene_id=HG00642_ch_G0000237;Parent=HG00642_ch_T0000750;transcript_name=HG00642_ch_T0000750;gene_name=ENSG00000286173;ID=exon:HG00642_ch_T0000750:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9335863	9337398	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000750;gene_id=HG00642_ch_G0000237;Parent=HG00642_ch_T0000750;transcript_name=HG00642_ch_T0000750;gene_name=ENSG00000286173;ID=intron:HG00642_ch_T0000750:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9337399	9337709	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000750;gene_id=HG00642_ch_G0000237;Parent=HG00642_ch_T0000750;transcript_name=HG00642_ch_T0000750;gene_name=ENSG00000286173;ID=exon:HG00642_ch_T0000750:1;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9338663	9341460	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00642_ch_G0000238;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00642_ch_G0000238;Name=TSPY3
HG00642_chrY	CAT	transcript	9338663	9341460	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_G0000238;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=HG00642_ch_T0000751;Name=TSPY3
HG00642_chrY	CAT	exon	9338663	9339194	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9338709	9339194	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9338709	9338711	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000751;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339195	9339801	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=intron:HG00642_ch_T0000751:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9339802	9339879	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9339802	9339879	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339880	9340007	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=intron:HG00642_ch_T0000751:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340008	9340119	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340008	9340119	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340120	9340220	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=intron:HG00642_ch_T0000751:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340221	9340366	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340221	9340366	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340367	9340472	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=intron:HG00642_ch_T0000751:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340473	9340554	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340473	9340554	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340555	9341248	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=intron:HG00642_ch_T0000751:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9341249	9341460	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=exon:HG00642_ch_T0000751:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9341249	9341271	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000751:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9341269	9341271	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000751;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000751;transcript_name=HG00642_ch_T0000751;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000751;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9338709	9341459	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_G0000238;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=HG00642_ch_T0000752;Name=TSPY3
HG00642_chrY	CAT	exon	9338709	9339194	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9338709	9339194	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000752:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9338709	9338711	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000752;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339195	9339801	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=intron:HG00642_ch_T0000752:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9339802	9339879	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9339802	9339879	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000752:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339880	9340007	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=intron:HG00642_ch_T0000752:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340008	9340119	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340008	9340119	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000752:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340120	9340220	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=intron:HG00642_ch_T0000752:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340221	9340366	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340221	9340366	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000752:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340367	9340461	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=intron:HG00642_ch_T0000752:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340462	9340554	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340462	9340524	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000752:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9340522	9340524	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000752;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340555	9341248	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=intron:HG00642_ch_T0000752:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9341249	9341459	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000752;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000752;transcript_name=HG00642_ch_T0000752;gene_name=TSPY3;ID=exon:HG00642_ch_T0000752:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9338709	9341271	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_G0000238;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=HG00642_ch_T0000753;Name=TSPY3
HG00642_chrY	CAT	exon	9338709	9338795	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9338709	9338795	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9338709	9338711	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=start_codon:HG00642_ch_T0000753;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9338796	9339056	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9339057	9339194	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9339057	9339194	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339195	9339801	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9339802	9339879	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9339802	9339879	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339880	9340007	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340008	9340119	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340008	9340119	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340120	9340220	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340221	9340366	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340221	9340366	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340367	9340472	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:4;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340473	9340554	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9340473	9340554	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340555	9341248	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=intron:HG00642_ch_T0000753:5;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9341249	9341271	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=exon:HG00642_ch_T0000753:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9341249	9341271	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=CDS:HG00642_ch_T0000753:6;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9341269	9341271	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000753;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000753;transcript_name=HG00642_ch_T0000753;gene_name=TSPY3;ID=stop_codon:HG00642_ch_T0000753;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9338709	9341466	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_G0000238;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=HG00642_ch_T0000754;Name=TSPY3
HG00642_chrY	CAT	exon	9338709	9339194	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=exon:HG00642_ch_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339195	9339801	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=intron:HG00642_ch_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9339802	9339879	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=exon:HG00642_ch_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9339880	9340007	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=intron:HG00642_ch_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340008	9340554	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=exon:HG00642_ch_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340555	9340681	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=intron:HG00642_ch_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340682	9341466	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000754;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000754;transcript_name=HG00642_ch_T0000754;gene_name=TSPY3;ID=exon:HG00642_ch_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9340069	9341451	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_G0000238;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=HG00642_ch_T0000755;Name=TSPY3
HG00642_chrY	CAT	exon	9340069	9340366	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000755;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=exon:HG00642_ch_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340367	9340461	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000755;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=intron:HG00642_ch_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9340462	9340554	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000755;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=exon:HG00642_ch_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9340555	9341248	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000755;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=intron:HG00642_ch_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9341249	9341451	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00642_ch_T0000755;gene_id=HG00642_ch_G0000238;Parent=HG00642_ch_T0000755;transcript_name=HG00642_ch_T0000755;gene_name=TSPY3;ID=exon:HG00642_ch_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9350634	9356375	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_3;gene_id=HG00642_ch_G0000239;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000239;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9350634	9356375	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_G0000239;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=HG00642_ch_T0000756;Name=FAM197Y5
HG00642_chrY	CAT	exon	9350634	9350823	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000756;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000756:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9350824	9354374	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000756;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000756:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9354375	9354460	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000756;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000756:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9354461	9356261	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000756;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000756:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9356262	9356375	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000756;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000756;transcript_name=HG00642_ch_T0000756;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000756:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9350764	9356363	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_G0000239;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=HG00642_ch_T0000757;Name=FAM197Y5
HG00642_chrY	CAT	exon	9350764	9350823	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000757:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9350824	9354374	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000757:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9354375	9354533	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000757:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9354534	9356029	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000757:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9356030	9356175	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000757:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9356176	9356261	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000757:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9356262	9356363	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000757;gene_id=HG00642_ch_G0000239;Parent=HG00642_ch_T0000757;transcript_name=HG00642_ch_T0000757;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000757:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9356030	9358022	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_7;gene_id=HG00642_ch_G0000240;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000240;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9356030	9358022	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000758;gene_id=HG00642_ch_G0000240;Parent=HG00642_ch_G0000240;transcript_name=HG00642_ch_T0000758;gene_name=FAM197Y5;ID=HG00642_ch_T0000758;Name=FAM197Y5
HG00642_chrY	CAT	exon	9356030	9356175	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000758;gene_id=HG00642_ch_G0000240;Parent=HG00642_ch_T0000758;transcript_name=HG00642_ch_T0000758;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000758:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9356176	9357711	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000758;gene_id=HG00642_ch_G0000240;Parent=HG00642_ch_T0000758;transcript_name=HG00642_ch_T0000758;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000758:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9357712	9358022	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000758;gene_id=HG00642_ch_G0000240;Parent=HG00642_ch_T0000758;transcript_name=HG00642_ch_T0000758;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000758:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9358977	9361773	.	+	.	source_gene_common_name=TSPY1;source_gene=ENSG00000258992.7;gene_id=HG00642_ch_G0000241;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG00642_ch_G0000241;Name=TSPY1
HG00642_chrY	CAT	transcript	9358977	9361772	100	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_G0000241;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=HG00642_ch_T0000759;Name=TSPY1
HG00642_chrY	CAT	exon	9358977	9359508	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9359023	9359508	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000759:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9359023	9359025	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=start_codon:HG00642_ch_T0000759;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9359509	9360115	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=intron:HG00642_ch_T0000759:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360116	9360193	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360116	9360193	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000759:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360194	9360321	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=intron:HG00642_ch_T0000759:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360322	9360433	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360322	9360433	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000759:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360434	9360534	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=intron:HG00642_ch_T0000759:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360535	9360680	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360535	9360680	.	+	2	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000759:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360681	9360775	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=intron:HG00642_ch_T0000759:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360776	9360868	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360776	9360838	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000759:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9360836	9360838	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=stop_codon:HG00642_ch_T0000759;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360869	9361562	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=intron:HG00642_ch_T0000759:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9361563	9361772	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000759;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000759;transcript_name=HG00642_ch_T0000759;gene_name=TSPY1;ID=exon:HG00642_ch_T0000759:5;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9358977	9361773	100	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_G0000241;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=HG00642_ch_T0000760;Name=TSPY1
HG00642_chrY	CAT	exon	9358977	9359508	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9359023	9359508	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9359023	9359025	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=start_codon:HG00642_ch_T0000760;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9359509	9360115	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=intron:HG00642_ch_T0000760:0;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360116	9360193	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360116	9360193	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360194	9360321	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=intron:HG00642_ch_T0000760:1;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360322	9360433	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360322	9360433	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360434	9360534	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=intron:HG00642_ch_T0000760:2;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360535	9360680	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360535	9360680	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360681	9360786	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=intron:HG00642_ch_T0000760:3;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9360787	9360868	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9360787	9360868	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9360869	9361562	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=intron:HG00642_ch_T0000760:4;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9361563	9361773	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=exon:HG00642_ch_T0000760:5;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9361563	9361585	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=CDS:HG00642_ch_T0000760:5;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9361583	9361585	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00642_ch_T0000760;gene_id=HG00642_ch_G0000241;Parent=HG00642_ch_T0000760;transcript_name=HG00642_ch_T0000760;gene_name=TSPY1;ID=stop_codon:HG00642_ch_T0000760;Name=TSPY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9369014	9376884	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=HG00642_ch_G0000242;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG00642_ch_G0000242;Name=FAM197Y6
HG00642_chrY	CAT	transcript	9369014	9376884	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_G0000242;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=HG00642_ch_T0000761;Name=FAM197Y6
HG00642_chrY	CAT	exon	9369014	9371127	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000761:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9371128	9374676	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000761:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9374677	9374762	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000761:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9374763	9376563	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000761:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9376564	9376673	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000761:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9376674	9376869	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000761:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9376870	9376884	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000761;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000761;transcript_name=HG00642_ch_T0000761;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000761:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9371068	9376665	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_G0000242;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=HG00642_ch_T0000762;Name=FAM197Y6
HG00642_chrY	CAT	exon	9371068	9371127	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000762:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9371128	9374676	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000762:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9374677	9374835	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000762:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9374836	9376331	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000762:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9376332	9376477	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000762:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9376478	9376563	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=intron:HG00642_ch_T0000762:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9376564	9376665	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00642_ch_T0000762;gene_id=HG00642_ch_G0000242;Parent=HG00642_ch_T0000762;transcript_name=HG00642_ch_T0000762;gene_name=FAM197Y6;ID=exon:HG00642_ch_T0000762:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9376332	9378324	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=HG00642_ch_G0000243;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=HG00642_ch_G0000243;Name=ENSG00000286173
HG00642_chrY	CAT	transcript	9376332	9378324	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000763;gene_id=HG00642_ch_G0000243;Parent=HG00642_ch_G0000243;transcript_name=HG00642_ch_T0000763;gene_name=ENSG00000286173;ID=HG00642_ch_T0000763;Name=ENSG00000286173
HG00642_chrY	CAT	exon	9376332	9376477	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000763;gene_id=HG00642_ch_G0000243;Parent=HG00642_ch_T0000763;transcript_name=HG00642_ch_T0000763;gene_name=ENSG00000286173;ID=exon:HG00642_ch_T0000763:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9376478	9378013	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000763;gene_id=HG00642_ch_G0000243;Parent=HG00642_ch_T0000763;transcript_name=HG00642_ch_T0000763;gene_name=ENSG00000286173;ID=intron:HG00642_ch_T0000763:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9378014	9378324	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00642_ch_T0000763;gene_id=HG00642_ch_G0000243;Parent=HG00642_ch_T0000763;transcript_name=HG00642_ch_T0000763;gene_name=ENSG00000286173;ID=exon:HG00642_ch_T0000763:1;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9379278	9382092	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00642_ch_G0000244;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00642_ch_G0000244;Name=TSPY9
HG00642_chrY	CAT	transcript	9379278	9382092	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_G0000244;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=HG00642_ch_T0000764;Name=TSPY9
HG00642_chrY	CAT	exon	9379278	9379827	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9379324	9379827	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9379324	9379326	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=start_codon:HG00642_ch_T0000764;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9379828	9380434	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=intron:HG00642_ch_T0000764:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9380435	9380512	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9380435	9380512	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9380513	9380640	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=intron:HG00642_ch_T0000764:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9380641	9380752	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9380641	9380752	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9380753	9380853	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=intron:HG00642_ch_T0000764:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9380854	9380999	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9380854	9380999	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9381000	9381105	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=intron:HG00642_ch_T0000764:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9381106	9381187	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9381106	9381187	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9381188	9381881	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=intron:HG00642_ch_T0000764:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9381882	9382092	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=exon:HG00642_ch_T0000764:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9381882	9381904	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000764:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9381902	9381904	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000764;gene_id=HG00642_ch_G0000244;Parent=HG00642_ch_T0000764;transcript_name=HG00642_ch_T0000764;gene_name=TSPY9;ID=stop_codon:HG00642_ch_T0000764;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9391372	9396962	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1;gene_id=HG00642_ch_G0000245;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00642_ch_G0000245;Name=FAM197Y4
HG00642_chrY	CAT	transcript	9391372	9396962	1000	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_G0000245;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=HG00642_ch_T0000765;Name=FAM197Y4
HG00642_chrY	CAT	exon	9391372	9391431	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000765:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9391432	9394980	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000765:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9394981	9395139	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000765:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9395140	9396628	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000765:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9396629	9396774	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000765:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9396775	9396860	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000765:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9396861	9396962	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000765;gene_id=HG00642_ch_G0000245;Parent=HG00642_ch_T0000765;transcript_name=HG00642_ch_T0000765;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000765:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9396629	9398621	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=HG00642_ch_G0000246;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00642_ch_G0000246;Name=FAM197Y4
HG00642_chrY	CAT	transcript	9396629	9398621	1000	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000766;gene_id=HG00642_ch_G0000246;Parent=HG00642_ch_G0000246;transcript_name=HG00642_ch_T0000766;gene_name=FAM197Y4;ID=HG00642_ch_T0000766;Name=FAM197Y4
HG00642_chrY	CAT	exon	9396629	9396774	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000766;gene_id=HG00642_ch_G0000246;Parent=HG00642_ch_T0000766;transcript_name=HG00642_ch_T0000766;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000766:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9396775	9398310	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000766;gene_id=HG00642_ch_G0000246;Parent=HG00642_ch_T0000766;transcript_name=HG00642_ch_T0000766;gene_name=FAM197Y4;ID=intron:HG00642_ch_T0000766:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9398311	9398621	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00642_ch_T0000766;gene_id=HG00642_ch_G0000246;Parent=HG00642_ch_T0000766;transcript_name=HG00642_ch_T0000766;gene_name=FAM197Y4;ID=exon:HG00642_ch_T0000766:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9399575	9402389	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00642_ch_G0000247;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00642_ch_G0000247;Name=TSPY9
HG00642_chrY	CAT	transcript	9399575	9402389	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_G0000247;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=HG00642_ch_T0000767;Name=TSPY9
HG00642_chrY	CAT	exon	9399575	9400124	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9399621	9400124	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9399621	9399623	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=start_codon:HG00642_ch_T0000767;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9400125	9400731	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=intron:HG00642_ch_T0000767:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9400732	9400809	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9400732	9400809	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9400810	9400937	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=intron:HG00642_ch_T0000767:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9400938	9401049	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9400938	9401049	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9401050	9401150	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=intron:HG00642_ch_T0000767:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9401151	9401296	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9401151	9401296	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9401297	9401402	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=intron:HG00642_ch_T0000767:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9401403	9401484	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9401403	9401484	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9401485	9402178	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=intron:HG00642_ch_T0000767:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9402179	9402389	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=exon:HG00642_ch_T0000767:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9402179	9402201	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000767:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9402199	9402201	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00642_ch_T0000767;gene_id=HG00642_ch_G0000247;Parent=HG00642_ch_T0000767;transcript_name=HG00642_ch_T0000767;gene_name=TSPY9;ID=stop_codon:HG00642_ch_T0000767;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9409593	9417454	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=HG00642_ch_G0000248;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00642_ch_G0000248;Name=FAM197Y3
HG00642_chrY	CAT	transcript	9409593	9417454	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_G0000248;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=HG00642_ch_T0000768;Name=FAM197Y3
HG00642_chrY	CAT	exon	9409593	9411706	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000768:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9411707	9415255	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000768:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9415256	9415341	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000768:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9415342	9417133	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000768:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9417134	9417243	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000768:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9417244	9417439	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000768:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9417440	9417454	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000768;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000768;transcript_name=HG00642_ch_T0000768;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000768:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9411647	9417235	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_G0000248;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=HG00642_ch_T0000769;Name=FAM197Y3
HG00642_chrY	CAT	exon	9411647	9411706	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000769:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9411707	9415255	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000769:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9415256	9415414	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000769:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9415415	9416901	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000769:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9416902	9417047	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000769:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9417048	9417133	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000769:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9417134	9417235	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000769;gene_id=HG00642_ch_G0000248;Parent=HG00642_ch_T0000769;transcript_name=HG00642_ch_T0000769;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000769:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9416902	9418894	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7;gene_id=HG00642_ch_G0000249;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00642_ch_G0000249;Name=FAM197Y3
HG00642_chrY	CAT	transcript	9416902	9418894	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000770;gene_id=HG00642_ch_G0000249;Parent=HG00642_ch_G0000249;transcript_name=HG00642_ch_T0000770;gene_name=FAM197Y3;ID=HG00642_ch_T0000770;Name=FAM197Y3
HG00642_chrY	CAT	exon	9416902	9417047	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000770;gene_id=HG00642_ch_G0000249;Parent=HG00642_ch_T0000770;transcript_name=HG00642_ch_T0000770;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000770:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9417048	9418583	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000770;gene_id=HG00642_ch_G0000249;Parent=HG00642_ch_T0000770;transcript_name=HG00642_ch_T0000770;gene_name=FAM197Y3;ID=intron:HG00642_ch_T0000770:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9418584	9418894	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00642_ch_T0000770;gene_id=HG00642_ch_G0000249;Parent=HG00642_ch_T0000770;transcript_name=HG00642_ch_T0000770;gene_name=FAM197Y3;ID=exon:HG00642_ch_T0000770:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9419888	9422674	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_1;gene_id=HG00642_ch_G0000250;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG00642_ch_G0000250;Name=ENSG00000293749
HG00642_chrY	CAT	transcript	9419888	9422674	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=HG00642_ch_T0000771;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9419888	9419980	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9419981	9420259	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9420260	9420397	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421423	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421424	9421569	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000771:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422674	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000771;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000771;transcript_name=HG00642_ch_T0000771;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000771:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9419900	9422662	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=HG00642_ch_T0000773;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9419900	9419980	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9419981	9420259	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9420260	9420397	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421430	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421431	9421569	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000773:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422662	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000773;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000773;transcript_name=HG00642_ch_T0000773;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000773:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9419909	9422669	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=HG00642_ch_T0000774;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9419909	9419980	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9419981	9420259	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9420260	9420397	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421423	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421424	9421569	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421664	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421665	9421757	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000774:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422669	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000774;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000774;transcript_name=HG00642_ch_T0000774;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000774:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9420129	9422667	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=HG00642_ch_T0000775;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9420129	9420397	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000775:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000775:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421423	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000775:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421424	9421569	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000775:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000775:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422667	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000775;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000775;transcript_name=HG00642_ch_T0000775;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000775:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9420225	9422662	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=HG00642_ch_T0000776;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9420225	9420397	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000776:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000776:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421430	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000776:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421431	9421569	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000776:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000776:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422662	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000776;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000776;transcript_name=HG00642_ch_T0000776;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000776:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9420351	9422673	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=HG00642_ch_T0000777;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9420351	9420453	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420454	9421022	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000777:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421023	9421082	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000777:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421423	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000777:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421424	9421569	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000777:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000777:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422673	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000777;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000777;transcript_name=HG00642_ch_T0000777;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000777:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9421052	9422660	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=HG00642_ch_T0000778;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9421052	9421082	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000778:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000778:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421569	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000778:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000778:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000778:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000778:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422660	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000778;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000778;transcript_name=HG00642_ch_T0000778;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000778:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9421597	9422669	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000779;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_G0000250;transcript_name=HG00642_ch_T0000779;gene_name=ENSG00000293749;ID=HG00642_ch_T0000779;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9421597	9421757	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000779;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000779;transcript_name=HG00642_ch_T0000779;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000779:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000779;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000779;transcript_name=HG00642_ch_T0000779;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000779:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422669	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000779;gene_id=HG00642_ch_G0000250;Parent=HG00642_ch_T0000779;transcript_name=HG00642_ch_T0000779;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000779:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9419894	9422474	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=HG00642_ch_G0000251;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG00642_ch_G0000251;Name=TSPY6P
HG00642_chrY	CAT	transcript	9419894	9422474	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_G0000251;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=HG00642_ch_T0000772;Name=TSPY6P
HG00642_chrY	CAT	exon	9419894	9420112	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420113	9420130	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9420131	9420397	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9420398	9421004	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421005	9421082	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421083	9421210	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421211	9421322	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421323	9421423	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421424	9421569	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421570	9421675	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9421676	9421757	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9421758	9422451	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000772:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9422452	9422474	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000772;gene_id=HG00642_ch_G0000251;Parent=HG00642_ch_T0000772;transcript_name=HG00642_ch_T0000772;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000772:6;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9429865	9437761	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1;gene_id=HG00642_ch_G0000252;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=HG00642_ch_G0000252;Name=ENSG00000290332
HG00642_chrY	CAT	transcript	9429865	9437761	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_G0000252;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=HG00642_ch_T0000780;Name=ENSG00000290332
HG00642_chrY	CAT	exon	9429865	9431991	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000780:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9431992	9435543	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000780:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9435544	9435629	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000780:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9435630	9437440	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000780:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9437441	9437550	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000780:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9437551	9437746	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000780:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9437747	9437761	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000780;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000780;transcript_name=HG00642_ch_T0000780;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000780:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9431932	9437542	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_G0000252;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=HG00642_ch_T0000781;Name=ENSG00000290332
HG00642_chrY	CAT	exon	9431932	9431991	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000781:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9431992	9435543	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000781:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9435544	9435702	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000781:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9435703	9437208	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000781:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9437209	9437354	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000781:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9437355	9437440	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=intron:HG00642_ch_T0000781:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9437441	9437542	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00642_ch_T0000781;gene_id=HG00642_ch_G0000252;Parent=HG00642_ch_T0000781;transcript_name=HG00642_ch_T0000781;gene_name=ENSG00000290332;ID=exon:HG00642_ch_T0000781:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9437209	9439201	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;alternative_source_transcripts=ENST00000618346.2;gene_id=HG00642_ch_G0000253;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG00642_ch_G0000253;Name=FAM197Y2
HG00642_chrY	CAT	transcript	9437209	9439201	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=ENST00000618346.2;transcript_id=HG00642_ch_T0000782;gene_id=HG00642_ch_G0000253;Parent=HG00642_ch_G0000253;transcript_name=HG00642_ch_T0000782;gene_name=FAM197Y2;ID=HG00642_ch_T0000782;Name=FAM197Y2
HG00642_chrY	CAT	exon	9437209	9437354	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=ENST00000618346.2;transcript_id=HG00642_ch_T0000782;gene_id=HG00642_ch_G0000253;Parent=HG00642_ch_T0000782;transcript_name=HG00642_ch_T0000782;gene_name=FAM197Y2;ID=exon:HG00642_ch_T0000782:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9437355	9438890	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=ENST00000618346.2;transcript_id=HG00642_ch_T0000782;gene_id=HG00642_ch_G0000253;Parent=HG00642_ch_T0000782;transcript_name=HG00642_ch_T0000782;gene_name=FAM197Y2;ID=intron:HG00642_ch_T0000782:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9438891	9439201	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=ENST00000618346.2;transcript_id=HG00642_ch_T0000782;gene_id=HG00642_ch_G0000253;Parent=HG00642_ch_T0000782;transcript_name=HG00642_ch_T0000782;gene_name=FAM197Y2;ID=exon:HG00642_ch_T0000782:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9440191	9442959	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG00642_ch_G0000254;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG00642_ch_G0000254;Name=ENSG00000293749
HG00642_chrY	CAT	transcript	9440191	9442959	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=HG00642_ch_T0000783;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440191	9440283	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440284	9440544	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9440545	9440682	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441708	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441709	9441854	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000783:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442959	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000783;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000783;transcript_name=HG00642_ch_T0000783;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000783:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9440203	9442947	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=HG00642_ch_T0000785;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440203	9440283	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440284	9440544	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9440545	9440682	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441715	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441716	9441854	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000785:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442947	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000785;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000785;transcript_name=HG00642_ch_T0000785;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000785:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9440212	9442954	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=HG00642_ch_T0000786;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440212	9440283	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440284	9440544	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9440545	9440682	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441708	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441709	9441854	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441949	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441950	9442042	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000786:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442954	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000786;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000786;transcript_name=HG00642_ch_T0000786;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000786:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9440414	9442952	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=HG00642_ch_T0000787;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440414	9440682	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000787:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000787:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441708	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000787:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441709	9441854	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000787:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000787:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442952	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000787;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000787;transcript_name=HG00642_ch_T0000787;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000787:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9440510	9442947	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=HG00642_ch_T0000788;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440510	9440682	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000788:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000788:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441715	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000788:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441716	9441854	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000788:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000788:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442947	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000788;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000788;transcript_name=HG00642_ch_T0000788;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000788:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9440636	9442958	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=HG00642_ch_T0000789;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9440636	9440738	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440739	9441307	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000789:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441308	9441367	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000789:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441708	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000789:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441709	9441854	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000789:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000789:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442958	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000789;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000789;transcript_name=HG00642_ch_T0000789;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000789:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9441337	9442945	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=HG00642_ch_T0000790;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9441337	9441367	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000790:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000790:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441854	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000790:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000790:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000790:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000790:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442945	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000790;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000790;transcript_name=HG00642_ch_T0000790;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000790:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9441882	9442954	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000791;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_G0000254;transcript_name=HG00642_ch_T0000791;gene_name=ENSG00000293749;ID=HG00642_ch_T0000791;Name=ENSG00000293749
HG00642_chrY	CAT	exon	9441882	9442042	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000791;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000791;transcript_name=HG00642_ch_T0000791;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000791:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000791;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000791;transcript_name=HG00642_ch_T0000791;gene_name=ENSG00000293749;ID=intron:HG00642_ch_T0000791:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442954	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00642_ch_T0000791;gene_id=HG00642_ch_G0000254;Parent=HG00642_ch_T0000791;transcript_name=HG00642_ch_T0000791;gene_name=ENSG00000293749;ID=exon:HG00642_ch_T0000791:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9440197	9442759	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=HG00642_ch_G0000255;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG00642_ch_G0000255;Name=TSPY6P
HG00642_chrY	CAT	transcript	9440197	9442759	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_G0000255;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=HG00642_ch_T0000784;Name=TSPY6P
HG00642_chrY	CAT	exon	9440197	9440407	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440408	9440415	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9440416	9440682	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9440683	9441289	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441290	9441367	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441368	9441495	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441496	9441607	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441608	9441708	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441709	9441854	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9441855	9441960	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9441961	9442042	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9442043	9442736	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=intron:HG00642_ch_T0000784:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9442737	9442759	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00642_ch_T0000784;gene_id=HG00642_ch_G0000255;Parent=HG00642_ch_T0000784;transcript_name=HG00642_ch_T0000784;gene_name=TSPY6P;ID=exon:HG00642_ch_T0000784:6;Name=TSPY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9452084	9457830	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG00642_ch_G0000256;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000256;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9452084	9457830	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_G0000256;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=HG00642_ch_T0000792;Name=FAM197Y5
HG00642_chrY	CAT	exon	9452084	9452273	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000792;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9452274	9455823	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000792;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9455824	9455909	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000792;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000792:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9455910	9457716	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000792;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000792:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9457717	9457830	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000792;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000792;transcript_name=HG00642_ch_T0000792;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000792:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9452214	9457818	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_G0000256;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=HG00642_ch_T0000793;Name=FAM197Y5
HG00642_chrY	CAT	exon	9452214	9452273	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000793:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9452274	9455823	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000793:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9455824	9455982	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000793:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9455983	9457484	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000793:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9457485	9457630	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000793:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9457631	9457716	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000793:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9457717	9457818	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000793;gene_id=HG00642_ch_G0000256;Parent=HG00642_ch_T0000793;transcript_name=HG00642_ch_T0000793;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000793:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9457485	9459477	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=HG00642_ch_G0000257;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00642_ch_G0000257;Name=FAM197Y5
HG00642_chrY	CAT	transcript	9457485	9459477	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000794;gene_id=HG00642_ch_G0000257;Parent=HG00642_ch_G0000257;transcript_name=HG00642_ch_T0000794;gene_name=FAM197Y5;ID=HG00642_ch_T0000794;Name=FAM197Y5
HG00642_chrY	CAT	exon	9457485	9457630	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000794;gene_id=HG00642_ch_G0000257;Parent=HG00642_ch_T0000794;transcript_name=HG00642_ch_T0000794;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000794:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9457631	9459166	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000794;gene_id=HG00642_ch_G0000257;Parent=HG00642_ch_T0000794;transcript_name=HG00642_ch_T0000794;gene_name=FAM197Y5;ID=intron:HG00642_ch_T0000794:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9459167	9459477	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00642_ch_T0000794;gene_id=HG00642_ch_G0000257;Parent=HG00642_ch_T0000794;transcript_name=HG00642_ch_T0000794;gene_name=FAM197Y5;ID=exon:HG00642_ch_T0000794:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9460431	9463243	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;alternative_source_transcripts=ENST00000428845.6;gene_id=HG00642_ch_G0000258;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00642_ch_G0000258;Name=TSPY9
HG00642_chrY	CAT	transcript	9460431	9463243	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_G0000258;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=HG00642_ch_T0000795;Name=TSPY9
HG00642_chrY	CAT	exon	9460431	9460980	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9460477	9460980	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	9460477	9460479	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=start_codon:HG00642_ch_T0000795;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9460981	9461587	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=intron:HG00642_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9461588	9461665	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9461588	9461665	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9461666	9461793	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=intron:HG00642_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9461794	9461905	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9461794	9461905	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9461906	9462006	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=intron:HG00642_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9462007	9462152	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9462007	9462152	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9462153	9462258	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=intron:HG00642_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9462259	9462340	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9462259	9462340	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9462341	9463032	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=intron:HG00642_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9463033	9463243	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=exon:HG00642_ch_T0000795:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	9463033	9463055	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=CDS:HG00642_ch_T0000795:5;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	9463053	9463055	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00642_ch_T0000795;gene_id=HG00642_ch_G0000258;Parent=HG00642_ch_T0000795;transcript_name=HG00642_ch_T0000795;gene_name=TSPY9;ID=stop_codon:HG00642_ch_T0000795;Name=TSPY9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9477493	9479723	.	-	.	source_gene_common_name=FAM197Y1;source_gene=ENSG00000224336.2;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;gene_id=HG00642_ch_G0000259;gene_biotype=unprocessed_pseudogene;gene_name=FAM197Y1;gene_sources=liftoff;ID=HG00642_ch_G0000259;Name=FAM197Y1
HG00642_chrY	CAT	transcript	9477493	9479723	1000	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_G0000259;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=HG00642_ch_T0000796;Name=FAM197Y1
HG00642_chrY	CAT	exon	9477493	9477582	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=exon:HG00642_ch_T0000796:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9477583	9477700	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=intron:HG00642_ch_T0000796:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9477701	9477846	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=exon:HG00642_ch_T0000796:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9477847	9477932	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=intron:HG00642_ch_T0000796:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9477933	9478042	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=exon:HG00642_ch_T0000796:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9478043	9478238	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=intron:HG00642_ch_T0000796:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9478239	9478300	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=exon:HG00642_ch_T0000796:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9478301	9479367	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=intron:HG00642_ch_T0000796:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9479368	9479723	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00642_ch_T0000796;gene_id=HG00642_ch_G0000259;Parent=HG00642_ch_T0000796;transcript_name=HG00642_ch_T0000796;gene_name=FAM197Y1;ID=exon:HG00642_ch_T0000796:4;Name=FAM197Y1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9480684	9483256	.	+	.	source_gene_common_name=TSPY15P;source_gene=ENSG00000236786.1;gene_id=HG00642_ch_G0000260;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY15P;gene_sources=liftoff;ID=HG00642_ch_G0000260;Name=TSPY15P
HG00642_chrY	CAT	transcript	9480684	9483256	1000	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_G0000260;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=HG00642_ch_T0000797;Name=TSPY15P
HG00642_chrY	CAT	exon	9480684	9481155	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:0;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9481156	9481762	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=intron:HG00642_ch_T0000797:0;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9481763	9481840	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:1;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9481841	9481968	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=intron:HG00642_ch_T0000797:1;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9481969	9482080	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:2;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482081	9482181	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=intron:HG00642_ch_T0000797:2;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9482182	9482326	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:3;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482327	9482421	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=intron:HG00642_ch_T0000797:3;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9482422	9482514	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:4;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482515	9483234	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=intron:HG00642_ch_T0000797:4;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9483235	9483256	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00642_ch_T0000797;gene_id=HG00642_ch_G0000260;Parent=HG00642_ch_T0000797;transcript_name=HG00642_ch_T0000797;gene_name=TSPY15P;ID=exon:HG00642_ch_T0000797:5;Name=TSPY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9480688	9483455	.	+	.	source_gene_common_name=ENSG00000308528;source_gene=ENSG00000308528.1;gene_id=HG00642_ch_G0000261;gene_biotype=lncRNA;gene_name=ENSG00000308528;gene_sources=liftoff;ID=HG00642_ch_G0000261;Name=ENSG00000308528
HG00642_chrY	CAT	transcript	9480688	9483455	1000	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_G0000261;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=HG00642_ch_T0000798;Name=ENSG00000308528
HG00642_chrY	CAT	exon	9480688	9481155	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9481156	9481762	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000798:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9481763	9481840	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9481841	9481968	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000798:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9481969	9482080	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482081	9482181	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000798:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9482182	9482326	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482327	9482432	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000798:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9482433	9482514	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482515	9483210	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000798:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9483211	9483455	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000798;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000798;transcript_name=HG00642_ch_T0000798;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000798:5;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9482441	9483448	1000	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000799;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_G0000261;transcript_name=HG00642_ch_T0000799;gene_name=ENSG00000308528;ID=HG00642_ch_T0000799;Name=ENSG00000308528
HG00642_chrY	CAT	exon	9482441	9482514	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000799;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000799;transcript_name=HG00642_ch_T0000799;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000799:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9482515	9483210	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000799;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000799;transcript_name=HG00642_ch_T0000799;gene_name=ENSG00000308528;ID=intron:HG00642_ch_T0000799:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9483211	9483448	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00642_ch_T0000799;gene_id=HG00642_ch_G0000261;Parent=HG00642_ch_T0000799;transcript_name=HG00642_ch_T0000799;gene_name=ENSG00000308528;ID=exon:HG00642_ch_T0000799:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9542528	9564918	.	-	.	source_gene_common_name=ENSG00000309329;source_gene=ENSG00000309329.1;gene_id=HG00642_ch_G0000262;gene_biotype=lncRNA;gene_name=ENSG00000309329;gene_sources=liftoff;ID=HG00642_ch_G0000262;Name=ENSG00000309329
HG00642_chrY	CAT	transcript	9542528	9555888	1000	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=HG00642_ch_T0000800;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542528	9543443	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000800:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9547353	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000800:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000800:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9547661	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000800:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547765	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000800:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547766	9553198	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000800:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000800:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000800:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555888	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000800;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000800;transcript_name=HG00642_ch_T0000800;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000800:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542530	9555888	1000	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=HG00642_ch_T0000801;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542530	9543443	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9544992	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000801:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544993	9545106	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9545107	9547353	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000801:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9547661	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000801:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547765	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547766	9553198	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000801:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000801:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555888	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000801;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000801;transcript_name=HG00642_ch_T0000801;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000801:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542531	9555888	1000	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=HG00642_ch_T0000802;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542531	9543443	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000802:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9547353	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000802:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000802:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9553198	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000802:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000802:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000802:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555888	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000802;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000802;transcript_name=HG00642_ch_T0000802;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000802:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542863	9555872	1000	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=HG00642_ch_T0000803;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542863	9543443	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9544992	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000803:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544993	9545106	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9545107	9547353	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000803:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9547661	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000803:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547774	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547775	9553198	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000803:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000803:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555872	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000803;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000803;transcript_name=HG00642_ch_T0000803;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000803:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542863	9555888	1000	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=HG00642_ch_T0000804;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542863	9543443	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000804:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9544992	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000804:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544993	9545106	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000804:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9545107	9547353	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000804:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000804:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9553198	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000804:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000804:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000804:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555888	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000804;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000804;transcript_name=HG00642_ch_T0000804;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000804:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542870	9555877	1000	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=HG00642_ch_T0000805;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542870	9543443	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000805;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000805:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9553198	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000805;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000805:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000805;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000805:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000805;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000805:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555877	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000805;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000805;transcript_name=HG00642_ch_T0000805;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000805:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9542877	9555882	1000	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=HG00642_ch_T0000806;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9542877	9543443	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000806:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9547353	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000806:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000806:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9547661	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000806:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547774	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000806:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547775	9553198	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000806:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000806:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000806:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555882	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000806;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000806;transcript_name=HG00642_ch_T0000806;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000806:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9543125	9564918	1000	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=HG00642_ch_T0000807;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9543125	9543443	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9544992	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000807:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544993	9545106	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9545107	9547353	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000807:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547354	9547455	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547456	9547661	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000807:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547774	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547775	9553198	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000807:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9564880	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000807:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9564881	9564918	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000807;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000807;transcript_name=HG00642_ch_T0000807;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000807:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9552452	9555872	1000	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_G0000262;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=HG00642_ch_T0000809;Name=ENSG00000309329
HG00642_chrY	CAT	exon	9552452	9552968	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000809;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000809:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9552969	9553198	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000809;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000809:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553288	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000809;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000809:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553289	9555726	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000809;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=intron:HG00642_ch_T0000809:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9555727	9555872	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00642_ch_T0000809;gene_id=HG00642_ch_G0000262;Parent=HG00642_ch_T0000809;transcript_name=HG00642_ch_T0000809;gene_name=ENSG00000309329;ID=exon:HG00642_ch_T0000809:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9543143	9553848	.	-	.	source_gene_common_name=RBMY3AP;source_gene=ENSG00000231436.1;gene_id=HG00642_ch_G0000263;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG00642_ch_G0000263;Name=RBMY3AP
HG00642_chrY	CAT	transcript	9543143	9553848	1000	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_G0000263;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=HG00642_ch_T0000808;Name=RBMY3AP
HG00642_chrY	CAT	exon	9543143	9543443	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543444	9543855	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9543856	9543939	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9543940	9544024	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544025	9544135	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9544136	9544992	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9544993	9545106	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9545107	9547661	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9547662	9547808	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9547809	9549724	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9549725	9549899	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9549900	9553198	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553199	9553302	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9553303	9553739	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=intron:HG00642_ch_T0000808:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9553740	9553848	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00642_ch_T0000808;gene_id=HG00642_ch_G0000263;Parent=HG00642_ch_T0000808;transcript_name=HG00642_ch_T0000808;gene_name=RBMY3AP;ID=exon:HG00642_ch_T0000808:7;Name=RBMY3AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9556755	9558924	.	+	.	source_gene_common_name=TSPY25P;source_gene=ENSG00000234110.1;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;gene_id=HG00642_ch_G0000264;gene_biotype=unprocessed_pseudogene;gene_name=TSPY25P;gene_sources=liftoff;ID=HG00642_ch_G0000264;Name=TSPY25P
HG00642_chrY	CAT	transcript	9556755	9558924	1000	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_G0000264;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=HG00642_ch_T0000810;Name=TSPY25P
HG00642_chrY	CAT	exon	9556755	9557117	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=exon:HG00642_ch_T0000810:0;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9557118	9558141	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=intron:HG00642_ch_T0000810:0;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9558142	9558228	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=exon:HG00642_ch_T0000810:1;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9558229	9558433	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=intron:HG00642_ch_T0000810:1;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9558434	9558546	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=exon:HG00642_ch_T0000810:2;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9558547	9558632	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=intron:HG00642_ch_T0000810:2;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9558633	9558773	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=exon:HG00642_ch_T0000810:3;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9558774	9558883	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=intron:HG00642_ch_T0000810:3;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9558884	9558924	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG00642_ch_T0000810;gene_id=HG00642_ch_G0000264;Parent=HG00642_ch_T0000810;transcript_name=HG00642_ch_T0000810;gene_name=TSPY25P;ID=exon:HG00642_ch_T0000810:4;Name=TSPY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9572821	9573288	.	-	.	source_gene_common_name=TSPY16P;source_gene=ENSG00000226223.1;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;gene_id=HG00642_ch_G0000265;gene_biotype=unprocessed_pseudogene;gene_name=TSPY16P;gene_sources=liftoff;ID=HG00642_ch_G0000265;Name=TSPY16P
HG00642_chrY	CAT	transcript	9572821	9573288	1000	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=199.573;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=HG00642_ch_T0000811;gene_id=HG00642_ch_G0000265;Parent=HG00642_ch_G0000265;transcript_name=HG00642_ch_T0000811;gene_name=TSPY16P;ID=HG00642_ch_T0000811;Name=TSPY16P
HG00642_chrY	CAT	exon	9572821	9573288	.	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=199.573;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=HG00642_ch_T0000811;gene_id=HG00642_ch_G0000265;Parent=HG00642_ch_T0000811;transcript_name=HG00642_ch_T0000811;gene_name=TSPY16P;ID=exon:HG00642_ch_T0000811:0;Name=TSPY16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9597801	9601582	.	+	.	source_gene_common_name=ENSG00000232617;source_gene=ENSG00000232617.1;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;gene_id=HG00642_ch_G0000266;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000232617;gene_sources=liftoff;ID=HG00642_ch_G0000266;Name=ENSG00000232617
HG00642_chrY	CAT	transcript	9597801	9601582	1000	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG00642_ch_T0000812;gene_id=HG00642_ch_G0000266;Parent=HG00642_ch_G0000266;transcript_name=HG00642_ch_T0000812;gene_name=ENSG00000232617;ID=HG00642_ch_T0000812;Name=ENSG00000232617
HG00642_chrY	CAT	exon	9597801	9597973	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG00642_ch_T0000812;gene_id=HG00642_ch_G0000266;Parent=HG00642_ch_T0000812;transcript_name=HG00642_ch_T0000812;gene_name=ENSG00000232617;ID=exon:HG00642_ch_T0000812:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9597974	9601494	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG00642_ch_T0000812;gene_id=HG00642_ch_G0000266;Parent=HG00642_ch_T0000812;transcript_name=HG00642_ch_T0000812;gene_name=ENSG00000232617;ID=intron:HG00642_ch_T0000812:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9601495	9601582	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG00642_ch_T0000812;gene_id=HG00642_ch_G0000266;Parent=HG00642_ch_T0000812;transcript_name=HG00642_ch_T0000812;gene_name=ENSG00000232617;ID=exon:HG00642_ch_T0000812:1;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9623605	9634259	.	+	.	source_gene_common_name=TTTY8;source_gene=ENSG00000183385.10;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;gene_id=HG00642_ch_G0000267;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG00642_ch_G0000267;Name=TTTY8
HG00642_chrY	CAT	transcript	9623605	9626263	1000	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=HG00642_ch_T0000813;Name=TTTY8
HG00642_chrY	CAT	exon	9623605	9623644	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000813;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=exon:HG00642_ch_T0000813:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623645	9624278	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000813;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=intron:HG00642_ch_T0000813:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624279	9624483	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000813;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=exon:HG00642_ch_T0000813:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9626075	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000813;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=intron:HG00642_ch_T0000813:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9626076	9626263	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG00642_ch_T0000813;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000813;transcript_name=HG00642_ch_T0000813;gene_name=TTTY8;ID=exon:HG00642_ch_T0000813:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9623609	9634259	1000	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=HG00642_ch_T0000814;Name=TTTY8
HG00642_chrY	CAT	exon	9623609	9623801	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000814;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=exon:HG00642_ch_T0000814:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623802	9624278	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000814;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=intron:HG00642_ch_T0000814:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624279	9624483	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000814;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=exon:HG00642_ch_T0000814:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9634008	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000814;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=intron:HG00642_ch_T0000814:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9634009	9634259	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG00642_ch_T0000814;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000814;transcript_name=HG00642_ch_T0000814;gene_name=TTTY8;ID=exon:HG00642_ch_T0000814:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9623621	9634231	1000	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=HG00642_ch_T0000815;Name=TTTY8
HG00642_chrY	CAT	exon	9623621	9623644	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000815;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=exon:HG00642_ch_T0000815:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623645	9624278	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000815;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=intron:HG00642_ch_T0000815:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624279	9624483	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000815;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=exon:HG00642_ch_T0000815:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9634008	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000815;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=intron:HG00642_ch_T0000815:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9634009	9634231	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG00642_ch_T0000815;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000815;transcript_name=HG00642_ch_T0000815;gene_name=TTTY8;ID=exon:HG00642_ch_T0000815:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9623635	9626263	1000	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=HG00642_ch_T0000816;Name=TTTY8
HG00642_chrY	CAT	exon	9623635	9623801	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000816;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=exon:HG00642_ch_T0000816:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623802	9624278	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000816;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=intron:HG00642_ch_T0000816:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624279	9624483	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000816;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=exon:HG00642_ch_T0000816:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9626075	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000816;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=intron:HG00642_ch_T0000816:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9626076	9626263	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=299.288;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG00642_ch_T0000816;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000816;transcript_name=HG00642_ch_T0000816;gene_name=TTTY8;ID=exon:HG00642_ch_T0000816:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9623641	9626521	1000	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=HG00642_ch_T0000817;Name=TTTY8
HG00642_chrY	CAT	exon	9623641	9623801	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000817;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=exon:HG00642_ch_T0000817:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623802	9624278	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000817;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=intron:HG00642_ch_T0000817:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624279	9624483	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000817;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=exon:HG00642_ch_T0000817:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9626344	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000817;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=intron:HG00642_ch_T0000817:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9626345	9626521	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG00642_ch_T0000817;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000817;transcript_name=HG00642_ch_T0000817;gene_name=TTTY8;ID=exon:HG00642_ch_T0000817:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9623666	9626509	1000	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_G0000267;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=HG00642_ch_T0000818;Name=TTTY8
HG00642_chrY	CAT	exon	9623666	9623801	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000818;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=exon:HG00642_ch_T0000818:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9623802	9624282	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000818;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=intron:HG00642_ch_T0000818:0;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9624283	9624483	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000818;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=exon:HG00642_ch_T0000818:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9624484	9626344	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000818;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=intron:HG00642_ch_T0000818:1;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9626345	9626509	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG00642_ch_T0000818;gene_id=HG00642_ch_G0000267;Parent=HG00642_ch_T0000818;transcript_name=HG00642_ch_T0000818;gene_name=TTTY8;ID=exon:HG00642_ch_T0000818:2;Name=TTTY8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9635203	9691236	.	+	.	source_gene_common_name=TTTY2B;source_gene=ENSG00000212856.7;gene_id=HG00642_ch_G0000268;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG00642_ch_G0000268;Name=TTTY2B
HG00642_chrY	CAT	transcript	9635203	9691048	1000	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=HG00642_ch_T0000819;Name=TTTY2B
HG00642_chrY	CAT	exon	9635203	9635969	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9635970	9641207	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641208	9641346	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641347	9645292	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9645293	9645474	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9645475	9646633	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646634	9646801	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646802	9647736	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9647737	9647957	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9647958	9650941	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9650942	9651848	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9651849	9667891	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9667892	9667979	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9667980	9668153	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9668154	9668364	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9668365	9674888	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:10;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:10;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:11;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000819:11;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691048	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=299.975;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000819;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000819;transcript_name=HG00642_ch_T0000819;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000819:12;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9644882	9686013	1000	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=HG00642_ch_T0000827;Name=TTTY2B
HG00642_chrY	CAT	exon	9644882	9644944	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000827:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644945	9645292	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000827:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9645293	9645474	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000827:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9645475	9684923	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000827:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000827:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000827:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9686013	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000827;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000827;transcript_name=HG00642_ch_T0000827;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000827:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9651632	9691051	1000	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=HG00642_ch_T0000839;Name=TTTY2B
HG00642_chrY	CAT	exon	9651632	9651848	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9651849	9668153	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9668154	9668364	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9668365	9674888	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688751	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000839:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691051	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG00642_ch_T0000839;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000839;transcript_name=HG00642_ch_T0000839;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000839:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9651648	9691236	1000	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=HG00642_ch_T0000840;Name=TTTY2B
HG00642_chrY	CAT	exon	9651648	9651848	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9651849	9667891	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9667892	9667979	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9667980	9668153	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9668154	9668364	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9668365	9674888	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9676986	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9676987	9677091	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677092	9677442	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9677443	9677529	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677530	9684923	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685151	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685152	9685764	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000840:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG00642_ch_T0000840;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000840;transcript_name=HG00642_ch_T0000840;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000840:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668844	9691236	1000	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=HG00642_ch_T0000841;Name=TTTY2B
HG00642_chrY	CAT	exon	9668844	9669055	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669056	9674888	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9676986	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9676987	9677091	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677092	9677442	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9677443	9677529	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677530	9684923	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000841:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=299.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG00642_ch_T0000841;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000841;transcript_name=HG00642_ch_T0000841;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000841:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668845	9691236	1000	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=HG00642_ch_T0000842;Name=TTTY2B
HG00642_chrY	CAT	exon	9668845	9669049	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669050	9674888	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685151	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685152	9685764	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9686442	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9686443	9686537	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9686538	9686900	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9686901	9687118	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9687119	9688751	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000842:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=299.953;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG00642_ch_T0000842;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000842;transcript_name=HG00642_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000842:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668845	9691236	1000	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=HG00642_ch_T0000843;Name=TTTY2B
HG00642_chrY	CAT	exon	9668845	9669055	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669056	9674888	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000843:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000843:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000843:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000843:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000843:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG00642_ch_T0000843;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000843;transcript_name=HG00642_ch_T0000843;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000843:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668857	9691236	1000	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=HG00642_ch_T0000844;Name=TTTY2B
HG00642_chrY	CAT	exon	9668857	9669055	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669056	9674888	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9677442	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9677443	9677529	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677530	9684923	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688751	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000844:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=299.945;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG00642_ch_T0000844;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000844;transcript_name=HG00642_ch_T0000844;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000844:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668857	9691047	1000	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=HG00642_ch_T0000845;Name=TTTY2B
HG00642_chrY	CAT	exon	9668857	9669055	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669056	9674888	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000845:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000845:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685151	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685152	9685764	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000845:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000845:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000845:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691047	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG00642_ch_T0000845;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000845;transcript_name=HG00642_ch_T0000845;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000845:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9668881	9690515	1000	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=HG00642_ch_T0000846;Name=TTTY2B
HG00642_chrY	CAT	exon	9668881	9669055	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9669056	9674888	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9674889	9674966	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9684923	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688751	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000846:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9690515	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=299.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000846;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000846;transcript_name=HG00642_ch_T0000846;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000846:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9673149	9691051	1000	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=HG00642_ch_T0000847;Name=TTTY2B
HG00642_chrY	CAT	exon	9673149	9674966	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9674967	9677442	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9677443	9677529	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9677530	9684923	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688751	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000847:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691051	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=299.968;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG00642_ch_T0000847;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000847;transcript_name=HG00642_ch_T0000847;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000847:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9682670	9691051	1000	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=HG00642_ch_T0000848;Name=TTTY2B
HG00642_chrY	CAT	exon	9682670	9682805	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9682806	9684544	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000848:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684545	9684631	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9684632	9684923	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000848:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000848:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000848:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000848:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691051	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;transcript_id=HG00642_ch_T0000848;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000848;transcript_name=HG00642_ch_T0000848;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000848:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9682675	9691236	1000	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=HG00642_ch_T0000849;Name=TTTY2B
HG00642_chrY	CAT	exon	9682675	9682811	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9682812	9684544	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684545	9684631	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9684632	9684923	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9686900	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9686901	9687118	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9687119	9688751	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688752	9688830	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9688831	9688950	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000849:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691236	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG00642_ch_T0000849;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000849;transcript_name=HG00642_ch_T0000849;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000849:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9682685	9691047	1000	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_G0000268;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=HG00642_ch_T0000850;Name=TTTY2B
HG00642_chrY	CAT	exon	9682685	9682811	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000850:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9682812	9684923	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000850:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9684924	9685072	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000850:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685073	9685764	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000850:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9685765	9685921	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000850:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685922	9688950	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000850:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9688951	9689148	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000850:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9689149	9690371	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=intron:HG00642_ch_T0000850:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9690372	9691047	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG00642_ch_T0000850;gene_id=HG00642_ch_G0000268;Parent=HG00642_ch_T0000850;transcript_name=HG00642_ch_T0000850;gene_name=TTTY2B;ID=exon:HG00642_ch_T0000850:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9639388	9656428	.	-	.	source_gene_common_name=TTTY7B;source_gene=ENSG00000147761.10;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;gene_id=HG00642_ch_G0000269;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG00642_ch_G0000269;Name=TTTY7B
HG00642_chrY	CAT	transcript	9639388	9647826	1000	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=HG00642_ch_T0000820;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9639879	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9639880	9640135	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9640136	9641108	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641222	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641223	9643139	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9643140	9643616	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9643617	9644304	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9644305	9644379	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644380	9646686	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646687	9646848	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646849	9647789	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000820:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9647790	9647826	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG00642_ch_T0000820;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000820;transcript_name=HG00642_ch_T0000820;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000820:6;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639388	9647826	1000	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=HG00642_ch_T0000821;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9641108	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000821:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641222	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641223	9643139	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000821:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9643140	9643616	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9643617	9644304	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000821:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9644305	9644379	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644380	9646686	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000821:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646687	9646848	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646849	9647789	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000821:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9647790	9647826	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG00642_ch_T0000821;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000821;transcript_name=HG00642_ch_T0000821;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000821:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639388	9643389	1000	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=HG00642_ch_T0000822;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000822;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000822:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9641108	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000822;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000822:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641321	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000822;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000822:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641322	9643139	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000822;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000822:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9643140	9643389	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG00642_ch_T0000822;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000822;transcript_name=HG00642_ch_T0000822;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000822:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639388	9653950	1000	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=HG00642_ch_T0000823;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000823:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9641108	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000823:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641222	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000823:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641223	9644304	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000823:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9644305	9644379	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000823:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644380	9646686	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000823:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646687	9646768	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000823:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9653658	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000823:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653950	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG00642_ch_T0000823;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000823;transcript_name=HG00642_ch_T0000823;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000823:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639388	9653950	1000	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=HG00642_ch_T0000824;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9641108	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000824:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641222	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641223	9644304	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000824:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9644305	9644379	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644380	9646686	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000824:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646687	9646768	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9652376	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000824:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9652377	9652534	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9652535	9653658	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000824:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653950	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG00642_ch_T0000824;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000824;transcript_name=HG00642_ch_T0000824;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000824:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639388	9643441	1000	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG00642_ch_T0000825;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000825;gene_name=TTTY7B;ID=HG00642_ch_T0000825;Name=TTTY7B
HG00642_chrY	CAT	exon	9639388	9639633	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG00642_ch_T0000825;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000825;transcript_name=HG00642_ch_T0000825;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000825:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9643139	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG00642_ch_T0000825;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000825;transcript_name=HG00642_ch_T0000825;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000825:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9643140	9643441	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG00642_ch_T0000825;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000825;transcript_name=HG00642_ch_T0000825;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000825:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9639392	9651535	1000	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=HG00642_ch_T0000826;Name=TTTY7B
HG00642_chrY	CAT	exon	9639392	9639633	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000826:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9639634	9641108	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000826:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9641109	9641222	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000826:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9641223	9644304	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000826:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9644305	9644379	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000826:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9644380	9646686	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000826:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9646687	9646768	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000826:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9651241	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000826:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9651242	9651535	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG00642_ch_T0000826;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000826;transcript_name=HG00642_ch_T0000826;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000826:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646593	9653971	1000	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=HG00642_ch_T0000828;Name=TTTY7B
HG00642_chrY	CAT	exon	9646593	9646768	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000828;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000828:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9652376	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000828;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000828:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9652377	9652534	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000828;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000828:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9652535	9653658	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000828;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000828:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653971	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG00642_ch_T0000828;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000828;transcript_name=HG00642_ch_T0000828;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000828:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646594	9653978	1000	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG00642_ch_T0000829;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000829;gene_name=TTTY7B;ID=HG00642_ch_T0000829;Name=TTTY7B
HG00642_chrY	CAT	exon	9646594	9646768	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG00642_ch_T0000829;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000829;transcript_name=HG00642_ch_T0000829;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000829:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9653658	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG00642_ch_T0000829;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000829;transcript_name=HG00642_ch_T0000829;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000829:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653978	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG00642_ch_T0000829;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000829;transcript_name=HG00642_ch_T0000829;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000829:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646598	9653945	1000	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=HG00642_ch_T0000830;Name=TTTY7B
HG00642_chrY	CAT	exon	9646598	9646768	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000830:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9649684	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000830:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9649685	9649791	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000830:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9649792	9650187	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000830:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9650188	9650321	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000830:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9650322	9653658	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000830:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653945	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG00642_ch_T0000830;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000830;transcript_name=HG00642_ch_T0000830;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000830:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646599	9653949	1000	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=HG00642_ch_T0000831;Name=TTTY7B
HG00642_chrY	CAT	exon	9646599	9646768	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000831:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9649684	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000831:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9649685	9649791	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000831:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9649792	9650187	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000831:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9650188	9650321	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000831:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9650322	9652376	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000831:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9652377	9652534	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000831:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9652535	9653658	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000831:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653949	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG00642_ch_T0000831;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000831;transcript_name=HG00642_ch_T0000831;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000831:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646600	9653958	1000	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=HG00642_ch_T0000832;Name=TTTY7B
HG00642_chrY	CAT	exon	9646600	9646768	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000832;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000832:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9650187	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000832;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000832:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9650188	9650321	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000832;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000832:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9650322	9653658	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000832;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000832:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653958	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG00642_ch_T0000832;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000832;transcript_name=HG00642_ch_T0000832;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000832:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646603	9653924	1000	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=HG00642_ch_T0000833;Name=TTTY7B
HG00642_chrY	CAT	exon	9646603	9646768	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000833:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9650187	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000833:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9650188	9650321	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000833:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9650322	9652376	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000833:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9652377	9652534	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000833:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9652535	9653658	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000833:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653924	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG00642_ch_T0000833;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000833;transcript_name=HG00642_ch_T0000833;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000833:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646605	9653945	1000	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=HG00642_ch_T0000834;Name=TTTY7B
HG00642_chrY	CAT	exon	9646605	9646768	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000834;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000834:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9649684	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000834;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000834:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9649685	9649791	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000834;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000834:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9649792	9653658	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000834;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000834:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653945	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG00642_ch_T0000834;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000834;transcript_name=HG00642_ch_T0000834;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000834:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646606	9656428	1000	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=HG00642_ch_T0000835;Name=TTTY7B
HG00642_chrY	CAT	exon	9646606	9646768	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000835;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000835:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9652376	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000835;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000835:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9652377	9652534	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000835;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000835:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9652535	9656175	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000835;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000835:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9656176	9656428	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG00642_ch_T0000835;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000835;transcript_name=HG00642_ch_T0000835;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000835:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646606	9651543	1000	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG00642_ch_T0000836;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000836;gene_name=TTTY7B;ID=HG00642_ch_T0000836;Name=TTTY7B
HG00642_chrY	CAT	exon	9646606	9646768	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG00642_ch_T0000836;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000836;transcript_name=HG00642_ch_T0000836;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000836:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9651241	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG00642_ch_T0000836;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000836;transcript_name=HG00642_ch_T0000836;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000836:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9651242	9651543	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG00642_ch_T0000836;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000836;transcript_name=HG00642_ch_T0000836;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000836:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9646606	9648284	1000	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG00642_ch_T0000837;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000837;gene_name=TTTY7B;ID=HG00642_ch_T0000837;Name=TTTY7B
HG00642_chrY	CAT	exon	9646606	9646768	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG00642_ch_T0000837;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000837;transcript_name=HG00642_ch_T0000837;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000837:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9646769	9647343	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG00642_ch_T0000837;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000837;transcript_name=HG00642_ch_T0000837;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000837:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9647344	9648284	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG00642_ch_T0000837;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000837;transcript_name=HG00642_ch_T0000837;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000837:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9650151	9653924	1000	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG00642_ch_T0000838;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_G0000269;transcript_name=HG00642_ch_T0000838;gene_name=TTTY7B;ID=HG00642_ch_T0000838;Name=TTTY7B
HG00642_chrY	CAT	exon	9650151	9650321	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG00642_ch_T0000838;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000838;transcript_name=HG00642_ch_T0000838;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000838:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9650322	9653658	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG00642_ch_T0000838;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000838;transcript_name=HG00642_ch_T0000838;gene_name=TTTY7B;ID=intron:HG00642_ch_T0000838:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9653659	9653924	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG00642_ch_T0000838;gene_id=HG00642_ch_G0000269;Parent=HG00642_ch_T0000838;transcript_name=HG00642_ch_T0000838;gene_name=TTTY7B;ID=exon:HG00642_ch_T0000838:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9685731	9706904	.	-	.	source_gene_common_name=TTTY1;source_gene=ENSG00000129845.6;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;gene_id=HG00642_ch_G0000270;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG00642_ch_G0000270;Name=TTTY1
HG00642_chrY	CAT	transcript	9685731	9706864	1000	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_G0000270;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=HG00642_ch_T0000851;Name=TTTY1
HG00642_chrY	CAT	exon	9685731	9685988	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=exon:HG00642_ch_T0000851:0;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9685989	9693569	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=intron:HG00642_ch_T0000851:0;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9693570	9693707	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=exon:HG00642_ch_T0000851:1;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9693708	9696063	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=intron:HG00642_ch_T0000851:1;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9696064	9696172	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=exon:HG00642_ch_T0000851:2;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9696173	9703035	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=intron:HG00642_ch_T0000851:2;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9703036	9703195	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=exon:HG00642_ch_T0000851:3;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9703196	9706619	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=intron:HG00642_ch_T0000851:3;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9706620	9706864	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG00642_ch_T0000851;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000851;transcript_name=HG00642_ch_T0000851;gene_name=TTTY1;ID=exon:HG00642_ch_T0000851:4;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9691727	9706904	1000	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_G0000270;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=HG00642_ch_T0000852;Name=TTTY1
HG00642_chrY	CAT	exon	9691727	9691888	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000852;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=exon:HG00642_ch_T0000852:0;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9691889	9696013	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000852;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=intron:HG00642_ch_T0000852:0;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9696014	9696172	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000852;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=exon:HG00642_ch_T0000852:1;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9696173	9706619	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000852;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=intron:HG00642_ch_T0000852:1;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9706620	9706904	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=HG00642_ch_T0000852;gene_id=HG00642_ch_G0000270;Parent=HG00642_ch_T0000852;transcript_name=HG00642_ch_T0000852;gene_name=TTTY1;ID=exon:HG00642_ch_T0000852:2;Name=TTTY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9716947	9766468	.	+	.	source_gene_common_name=TTTY22;source_gene=ENSG00000224075.2;gene_id=HG00642_ch_G0000271;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG00642_ch_G0000271;Name=TTTY22
HG00642_chrY	CAT	transcript	9716947	9766468	1000	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_G0000271;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=HG00642_ch_T0000853;Name=TTTY22
HG00642_chrY	CAT	exon	9716947	9717152	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:0;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9717153	9719870	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:0;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9719871	9720026	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:1;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9720027	9727462	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:1;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9727463	9727543	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:2;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9727544	9727919	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:2;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9727920	9727992	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:3;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9727993	9730533	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:3;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9730534	9730786	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:4;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9730787	9737346	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:4;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9737347	9737458	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:5;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9737459	9741883	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:5;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9741884	9741958	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:6;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9741959	9742643	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:6;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9742644	9742682	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:7;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9742683	9745858	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:7;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9745859	9745973	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:8;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9745974	9759566	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:8;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9759567	9759735	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:9;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9759736	9764006	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:9;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9764007	9764179	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:10;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9764180	9766329	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=intron:HG00642_ch_T0000853:10;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9766330	9766468	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000853;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000853;transcript_name=HG00642_ch_T0000853;gene_name=TTTY22;ID=exon:HG00642_ch_T0000853:11;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9733728	9745818	1000	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_G0000271;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=HG00642_ch_T0000854;Name=TTTY22
HG00642_chrY	CAT	exon	9733728	9733882	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=exon:HG00642_ch_T0000854:0;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9733883	9737346	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=intron:HG00642_ch_T0000854:0;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9737347	9737458	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=exon:HG00642_ch_T0000854:1;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9737459	9741883	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=intron:HG00642_ch_T0000854:1;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9741884	9741958	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=exon:HG00642_ch_T0000854:2;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9741959	9742643	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=intron:HG00642_ch_T0000854:2;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9742644	9742682	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=exon:HG00642_ch_T0000854:3;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9742683	9745772	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=intron:HG00642_ch_T0000854:3;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9745773	9745818	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00642_ch_T0000854;gene_id=HG00642_ch_G0000271;Parent=HG00642_ch_T0000854;transcript_name=HG00642_ch_T0000854;gene_name=TTTY22;ID=exon:HG00642_ch_T0000854:4;Name=TTTY22;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9745888	9750086	.	+	.	source_gene_common_name=ENSG00000228379;source_gene=ENSG00000228379.1;gene_id=HG00642_ch_G0000272;gene_biotype=lncRNA;gene_name=ENSG00000228379;gene_sources=liftoff;ID=HG00642_ch_G0000272;Name=ENSG00000228379
HG00642_chrY	CAT	transcript	9745888	9750086	1000	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_G0000272;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=HG00642_ch_T0000855;Name=ENSG00000228379
HG00642_chrY	CAT	exon	9745888	9745973	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_T0000855;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=exon:HG00642_ch_T0000855:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9745974	9748474	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_T0000855;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=intron:HG00642_ch_T0000855:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9748475	9748617	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_T0000855;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=exon:HG00642_ch_T0000855:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9748618	9749867	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_T0000855;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=intron:HG00642_ch_T0000855:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9749868	9750086	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00642_ch_T0000855;gene_id=HG00642_ch_G0000272;Parent=HG00642_ch_T0000855;transcript_name=HG00642_ch_T0000855;gene_name=ENSG00000228379;ID=exon:HG00642_ch_T0000855:2;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9763651	9791120	.	-	.	source_gene_common_name=ENSG00000310196;source_gene=ENSG00000310196.1;gene_id=HG00642_ch_G0000273;gene_biotype=lncRNA;gene_name=ENSG00000310196;gene_sources=liftoff;ID=HG00642_ch_G0000273;Name=ENSG00000310196
HG00642_chrY	CAT	transcript	9763651	9791120	1000	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_G0000273;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=HG00642_ch_T0000856;Name=ENSG00000310196
HG00642_chrY	CAT	exon	9763651	9764292	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=exon:HG00642_ch_T0000856:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9764293	9764701	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=intron:HG00642_ch_T0000856:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9764702	9764783	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=exon:HG00642_ch_T0000856:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9764784	9768419	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=intron:HG00642_ch_T0000856:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9768420	9768569	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=exon:HG00642_ch_T0000856:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9768570	9790641	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=intron:HG00642_ch_T0000856:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9790642	9791120	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG00642_ch_T0000856;gene_id=HG00642_ch_G0000273;Parent=HG00642_ch_T0000856;transcript_name=HG00642_ch_T0000856;gene_name=ENSG00000310196;ID=exon:HG00642_ch_T0000856:3;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9763991	9779269	.	-	.	source_gene_common_name=RBMY2NP;source_gene=ENSG00000229208.1;gene_id=HG00642_ch_G0000274;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2NP;gene_sources=liftoff;ID=HG00642_ch_G0000274;Name=RBMY2NP
HG00642_chrY	CAT	transcript	9763991	9779269	1000	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_G0000274;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=HG00642_ch_T0000857;Name=RBMY2NP
HG00642_chrY	CAT	exon	9763991	9764292	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9764293	9764707	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9764708	9764783	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9764784	9764893	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9764894	9765004	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9765005	9765401	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9765402	9765512	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9765513	9766319	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9766320	9766419	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9766420	9768419	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9768420	9768569	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9768570	9779091	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=intron:HG00642_ch_T0000857:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9779092	9779269	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00642_ch_T0000857;gene_id=HG00642_ch_G0000274;Parent=HG00642_ch_T0000857;transcript_name=HG00642_ch_T0000857;gene_name=RBMY2NP;ID=exon:HG00642_ch_T0000857:6;Name=RBMY2NP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9801037	9801277	.	-	.	source_gene_common_name=ENSG00000274445;source_gene=ENSG00000274445.1;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;gene_id=HG00642_ch_G0000275;gene_biotype=processed_pseudogene;gene_name=ENSG00000274445;gene_sources=liftoff;ID=HG00642_ch_G0000275;Name=ENSG00000274445
HG00642_chrY	CAT	transcript	9801037	9801277	1000	-	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;transcript_id=HG00642_ch_T0000858;gene_id=HG00642_ch_G0000275;Parent=HG00642_ch_G0000275;transcript_name=HG00642_ch_T0000858;gene_name=ENSG00000274445;ID=HG00642_ch_T0000858;Name=ENSG00000274445
HG00642_chrY	CAT	exon	9801037	9801277	.	-	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;transcript_id=HG00642_ch_T0000858;gene_id=HG00642_ch_G0000275;Parent=HG00642_ch_T0000858;transcript_name=HG00642_ch_T0000858;gene_name=ENSG00000274445;ID=exon:HG00642_ch_T0000858:0;Name=ENSG00000274445;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9802239	9803356	.	+	.	source_gene_common_name=TSPY18P;source_gene=ENSG00000231874.3;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;gene_id=HG00642_ch_G0000276;gene_biotype=unprocessed_pseudogene;gene_name=TSPY18P;gene_sources=liftoff;ID=HG00642_ch_G0000276;Name=TSPY18P
HG00642_chrY	CAT	transcript	9802239	9803356	1000	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG00642_ch_T0000859;gene_id=HG00642_ch_G0000276;Parent=HG00642_ch_G0000276;transcript_name=HG00642_ch_T0000859;gene_name=TSPY18P;ID=HG00642_ch_T0000859;Name=TSPY18P
HG00642_chrY	CAT	exon	9802239	9802714	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG00642_ch_T0000859;gene_id=HG00642_ch_G0000276;Parent=HG00642_ch_T0000859;transcript_name=HG00642_ch_T0000859;gene_name=TSPY18P;ID=exon:HG00642_ch_T0000859:0;Name=TSPY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9802715	9803323	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG00642_ch_T0000859;gene_id=HG00642_ch_G0000276;Parent=HG00642_ch_T0000859;transcript_name=HG00642_ch_T0000859;gene_name=TSPY18P;ID=intron:HG00642_ch_T0000859:0;Name=TSPY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9803324	9803356	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG00642_ch_T0000859;gene_id=HG00642_ch_G0000276;Parent=HG00642_ch_T0000859;transcript_name=HG00642_ch_T0000859;gene_name=TSPY18P;ID=exon:HG00642_ch_T0000859:1;Name=TSPY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9831357	9840708	.	-	.	source_gene_common_name=ENSG00000309435;source_gene=ENSG00000309435.1;gene_id=HG00642_ch_G0000277;gene_biotype=lncRNA;gene_name=ENSG00000309435;gene_sources=liftoff;ID=HG00642_ch_G0000277;Name=ENSG00000309435
HG00642_chrY	CAT	transcript	9831357	9840701	1000	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=HG00642_ch_T0000860;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9831357	9832695	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9836653	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9836654	9836749	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836750	9838171	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839627	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839628	9840233	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000860:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840234	9840701	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000860;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000860;transcript_name=HG00642_ch_T0000860;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000860:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832067	9840682	1000	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=HG00642_ch_T0000861;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832067	9832695	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9836653	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9836654	9836749	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836750	9838171	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839670	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839671	9839957	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000861:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840682	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000861;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000861;transcript_name=HG00642_ch_T0000861;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000861:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840701	1000	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=HG00642_ch_T0000862;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000862:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9839310	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000862:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000862:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839957	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000862:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000862:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000862:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840701	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000862;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000862;transcript_name=HG00642_ch_T0000862;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000862:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840080	1000	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=HG00642_ch_T0000863;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000863:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9839310	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000863:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000863:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000863:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839609	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000863:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839610	9839957	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000863:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840080	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000863;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000863;transcript_name=HG00642_ch_T0000863;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000863:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840661	1000	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=HG00642_ch_T0000864;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000864:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9839310	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000864:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000864:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000864:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839627	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000864:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839628	9840233	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000864:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840234	9840661	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000864;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000864;transcript_name=HG00642_ch_T0000864;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000864:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840682	1000	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=HG00642_ch_T0000865;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9836653	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9836654	9836749	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836750	9838171	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839957	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000865:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840682	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000865;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000865;transcript_name=HG00642_ch_T0000865;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000865:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840693	1000	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=HG00642_ch_T0000866;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9836514	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9836515	9836768	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836769	9838171	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839609	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839610	9839957	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000866:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840693	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000866;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000866;transcript_name=HG00642_ch_T0000866;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000866:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9832080	9840708	1000	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=HG00642_ch_T0000867;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9832080	9832695	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9832696	9836653	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9836654	9836749	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836750	9838171	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839609	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839610	9839957	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000867:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840708	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000867;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000867;transcript_name=HG00642_ch_T0000867;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000867:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9836198	9840675	1000	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=HG00642_ch_T0000869;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9836198	9836749	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9836750	9838171	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838172	9838185	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838838	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838839	9838961	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838962	9839310	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839609	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839610	9839957	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000869:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840675	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000869;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000869;transcript_name=HG00642_ch_T0000869;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000869:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9837633	9840699	1000	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=HG00642_ch_T0000870;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9837633	9838185	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000870:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9839310	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000870:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000870:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000870:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839609	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000870:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839610	9839957	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000870:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000870:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000870:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840699	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000870;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000870;transcript_name=HG00642_ch_T0000870;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000870:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9837634	9840684	1000	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_G0000277;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=HG00642_ch_T0000871;Name=ENSG00000309435
HG00642_chrY	CAT	exon	9837634	9838185	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000871:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9839310	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000871:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000871:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839957	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000871:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839958	9840200	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000871:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9840201	9840623	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=intron:HG00642_ch_T0000871:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840624	9840684	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00642_ch_T0000871;gene_id=HG00642_ch_G0000277;Parent=HG00642_ch_T0000871;transcript_name=HG00642_ch_T0000871;gene_name=ENSG00000309435;ID=exon:HG00642_ch_T0000871:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9833230	9833716	.	+	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;gene_id=HG00642_ch_G0000278;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG00642_ch_G0000278;Name=ENSG00000275352
HG00642_chrY	CAT	transcript	9833230	9833716	1000	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_G0000278;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=HG00642_ch_T0000868;Name=ENSG00000275352
HG00642_chrY	CAT	exon	9833230	9833293	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_T0000868;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000868:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9833294	9833382	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_T0000868;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=intron:HG00642_ch_T0000868:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9833383	9833527	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_T0000868;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000868:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9833528	9833633	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_T0000868;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=intron:HG00642_ch_T0000868:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9833634	9833716	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00642_ch_T0000868;gene_id=HG00642_ch_G0000278;Parent=HG00642_ch_T0000868;transcript_name=HG00642_ch_T0000868;gene_name=ENSG00000275352;ID=exon:HG00642_ch_T0000868:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9838166	9840710	.	-	.	source_gene_common_name=TSPY13P;source_gene=ENSG00000187657.6;gene_id=HG00642_ch_G0000279;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY13P;gene_sources=liftoff;ID=HG00642_ch_G0000279;Name=TSPY13P
HG00642_chrY	CAT	transcript	9838166	9840710	1000	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_G0000279;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=HG00642_ch_T0000872;Name=TSPY13P
HG00642_chrY	CAT	exon	9838166	9838185	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:0;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838186	9838874	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=intron:HG00642_ch_T0000872:0;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9838875	9838959	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:1;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9838960	9839068	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=intron:HG00642_ch_T0000872:1;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839069	9839211	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:2;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839212	9839310	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=intron:HG00642_ch_T0000872:2;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839311	9839421	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:3;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839422	9839549	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=intron:HG00642_ch_T0000872:3;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9839550	9839627	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:4;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9839628	9840233	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=intron:HG00642_ch_T0000872:4;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9840234	9840710	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00642_ch_T0000872;gene_id=HG00642_ch_G0000279;Parent=HG00642_ch_T0000872;transcript_name=HG00642_ch_T0000872;gene_name=TSPY13P;ID=exon:HG00642_ch_T0000872:5;Name=TSPY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9840892	9845713	.	+	.	source_gene_common_name=TTTY23;source_gene=ENSG00000239225.2;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;gene_id=HG00642_ch_G0000280;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG00642_ch_G0000280;Name=TTTY23
HG00642_chrY	CAT	transcript	9840892	9845713	1000	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_G0000280;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=HG00642_ch_T0000873;Name=TTTY23
HG00642_chrY	CAT	exon	9840892	9841073	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9841074	9843017	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843018	9843140	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843141	9843335	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843336	9843425	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843426	9843538	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843539	9843684	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843685	9844224	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9844225	9844277	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:4;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9844278	9844457	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:4;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9844458	9844565	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:5;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9844566	9845117	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=intron:HG00642_ch_T0000873:5;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9845118	9845713	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=HG00642_ch_T0000873;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000873;transcript_name=HG00642_ch_T0000873;gene_name=TTTY23;ID=exon:HG00642_ch_T0000873:6;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9840910	9845536	1000	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_G0000280;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=HG00642_ch_T0000874;Name=TTTY23
HG00642_chrY	CAT	exon	9840910	9841073	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9841074	9843017	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=intron:HG00642_ch_T0000874:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843018	9843140	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843141	9843335	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=intron:HG00642_ch_T0000874:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843336	9843425	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843426	9843538	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=intron:HG00642_ch_T0000874:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843539	9843684	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843685	9844457	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=intron:HG00642_ch_T0000874:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9844458	9844565	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:4;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9844566	9845117	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=intron:HG00642_ch_T0000874:4;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9845118	9845536	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=HG00642_ch_T0000874;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000874;transcript_name=HG00642_ch_T0000874;gene_name=TTTY23;ID=exon:HG00642_ch_T0000874:5;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9840910	9845536	1000	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_G0000280;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=HG00642_ch_T0000875;Name=TTTY23
HG00642_chrY	CAT	exon	9840910	9841073	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=exon:HG00642_ch_T0000875:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9841074	9843335	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=intron:HG00642_ch_T0000875:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843336	9843425	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=exon:HG00642_ch_T0000875:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843426	9843538	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=intron:HG00642_ch_T0000875:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843539	9843684	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=exon:HG00642_ch_T0000875:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843685	9844457	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=intron:HG00642_ch_T0000875:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9844458	9844565	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=exon:HG00642_ch_T0000875:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9844566	9845117	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=intron:HG00642_ch_T0000875:3;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9845118	9845536	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=HG00642_ch_T0000875;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000875;transcript_name=HG00642_ch_T0000875;gene_name=TTTY23;ID=exon:HG00642_ch_T0000875:4;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9843369	9844533	1000	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_G0000280;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=HG00642_ch_T0000876;Name=TTTY23
HG00642_chrY	CAT	exon	9843369	9843425	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000876;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=exon:HG00642_ch_T0000876:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843426	9843538	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000876;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=intron:HG00642_ch_T0000876:0;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9843539	9843684	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000876;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=exon:HG00642_ch_T0000876:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9843685	9844224	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000876;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=intron:HG00642_ch_T0000876:1;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9844225	9844533	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=HG00642_ch_T0000876;gene_id=HG00642_ch_G0000280;Parent=HG00642_ch_T0000876;transcript_name=HG00642_ch_T0000876;gene_name=TTTY23;ID=exon:HG00642_ch_T0000876:2;Name=TTTY23;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9884124	9891992	.	+	.	source_gene_common_name=RBMY2OP;source_gene=ENSG00000234950.1;alternative_source_transcripts=ENST00000447105.1;gene_id=HG00642_ch_G0000281;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2OP;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000281;Name=RBMY2OP
HG00642_chrY	CAT	transcript	9884124	9891992	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_G0000281;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=HG00642_ch_T0000877;Name=RBMY2OP
HG00642_chrY	CAT	exon	9884124	9884232	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000877:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9884233	9884691	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000877:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9884692	9884767	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000877:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9884768	9890008	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000877:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9890009	9890121	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000877:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9890122	9890987	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000877:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9890988	9891267	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000877:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9891268	9891680	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000877:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9891681	9891992	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG00642_ch_T0000877;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000877;transcript_name=HG00642_ch_T0000877;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000877:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9884124	9891992	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_G0000281;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=HG00642_ch_T0000878;Name=RBMY2OP
HG00642_chrY	CAT	exon	9884124	9884232	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9884233	9884691	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000878:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9884692	9884767	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9884768	9890008	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000878:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9890009	9890121	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9890122	9890987	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000878:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9890988	9891098	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9891099	9891178	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000878:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9891179	9891267	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9891268	9891680	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=intron:HG00642_ch_T0000878:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9891681	9891992	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00642_ch_T0000878;gene_id=HG00642_ch_G0000281;Parent=HG00642_ch_T0000878;transcript_name=HG00642_ch_T0000878;gene_name=RBMY2OP;ID=exon:HG00642_ch_T0000878:5;Name=RBMY2OP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9887101	9967881	.	-	.	source_gene_common_name=ENSG00000290344;source_gene=ENSG00000290344.2;gene_id=HG00642_ch_G0000282;gene_biotype=lncRNA;gene_name=ENSG00000290344;gene_sources=liftoff;ID=HG00642_ch_G0000282;Name=ENSG00000290344
HG00642_chrY	CAT	transcript	9887101	9967878	1000	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=HG00642_ch_T0000879;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9887101	9887261	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9887262	9921759	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9921760	9921809	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9921810	9928167	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9928168	9928286	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9928287	9955773	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000879:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967878	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000879;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000879;transcript_name=HG00642_ch_T0000879;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000879:9;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9887101	9967844	1000	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=HG00642_ch_T0000880;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9887101	9887261	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000880:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9887262	9955773	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000880:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000880:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000880:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000880:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000880:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000880:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9967732	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000880:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967844	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000880;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000880;transcript_name=HG00642_ch_T0000880;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000880:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9924200	9967844	1000	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=HG00642_ch_T0000881;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9924200	9924781	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9924782	9928167	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9928168	9928286	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9928287	9955773	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9966666	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000881:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967844	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000881;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000881;transcript_name=HG00642_ch_T0000881;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000881:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9928712	9967842	1000	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=HG00642_ch_T0000882;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9928712	9929039	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9929040	9955773	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000882:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000882:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000882:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000882:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9967701	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000882:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967842	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000882;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000882;transcript_name=HG00642_ch_T0000882;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000882:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9928712	9967844	1000	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=HG00642_ch_T0000883;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9928712	9929039	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9929040	9955773	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000883:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967844	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000883;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000883;transcript_name=HG00642_ch_T0000883;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000883:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9928715	9967860	1000	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=HG00642_ch_T0000884;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9928715	9929039	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000884:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9929040	9955773	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000884:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000884:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000884:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000884:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000884:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000884:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9967701	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000884:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967860	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000884;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000884;transcript_name=HG00642_ch_T0000884;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000884:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9928726	9967844	1000	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=HG00642_ch_T0000885;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9928726	9929039	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9929040	9955773	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966666	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000885:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967844	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000885;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000885;transcript_name=HG00642_ch_T0000885;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000885:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9928726	9967881	1000	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=HG00642_ch_T0000886;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9928726	9929039	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000886:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9929040	9955773	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000886:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000886:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000886:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000886:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000886:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000886:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9967732	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000886:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967881	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000886;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000886;transcript_name=HG00642_ch_T0000886;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000886:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9937169	9967884	1000	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=HG00642_ch_T0000887;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9937169	9937755	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9937756	9955773	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000887:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967884	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000887;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000887;transcript_name=HG00642_ch_T0000887;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000887:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9937545	9967910	1000	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=HG00642_ch_T0000888;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9937545	9937755	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9937756	9955773	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966666	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000888:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967910	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000888;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000888;transcript_name=HG00642_ch_T0000888;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000888:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9945657	9967858	1000	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=HG00642_ch_T0000889;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9945657	9945921	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9945922	9955773	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000889:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967858	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000889;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000889;transcript_name=HG00642_ch_T0000889;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000889:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954783	9967858	1000	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=HG00642_ch_T0000890;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954783	9955172	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966666	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000890:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967858	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000890;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000890;transcript_name=HG00642_ch_T0000890;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000890:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954785	9967881	1000	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=HG00642_ch_T0000891;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954785	9955172	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000891:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000891:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000891:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000891:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000891:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000891:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000891:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9967732	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000891:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967881	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000891;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000891;transcript_name=HG00642_ch_T0000891;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000891:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954785	9967863	1000	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=HG00642_ch_T0000892;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954785	9955172	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000892:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000892:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000892:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000892:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9967701	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000892:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967863	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000892;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000892;transcript_name=HG00642_ch_T0000892;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000892:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954785	9967881	1000	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=HG00642_ch_T0000893;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954785	9955172	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966666	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000893:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967881	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000893;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000893;transcript_name=HG00642_ch_T0000893;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000893:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954785	9967859	1000	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=HG00642_ch_T0000894;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954785	9955172	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000894:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967859	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000894;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000894;transcript_name=HG00642_ch_T0000894;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000894:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954785	9967863	1000	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=HG00642_ch_T0000895;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954785	9955172	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000895:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000895:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000895:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9966666	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000895:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000895:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967863	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000895;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000895;transcript_name=HG00642_ch_T0000895;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000895:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9954966	9967842	1000	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=HG00642_ch_T0000896;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9954966	9955172	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955173	9955773	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000896:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000896:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000896:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9966666	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000896:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000896:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967842	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000896;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000896;transcript_name=HG00642_ch_T0000896;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000896:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9955550	9967863	1000	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=HG00642_ch_T0000898;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9955550	9955862	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9959088	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959197	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959198	9962967	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967732	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000898:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967733	9967863	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000898;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000898;transcript_name=HG00642_ch_T0000898;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000898:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9961907	9967856	1000	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=HG00642_ch_T0000899;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9961907	9962094	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000899:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9962095	9962967	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000899:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000899:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000899:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000899:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000899:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000899:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000899:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967856	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000899;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000899;transcript_name=HG00642_ch_T0000899;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000899:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	9962434	9967846	1000	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_G0000282;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=HG00642_ch_T0000900;Name=ENSG00000290344
HG00642_chrY	CAT	exon	9962434	9963145	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000900;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000900:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966666	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000900;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000900:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000900;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000900:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966767	9967701	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000900;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=intron:HG00642_ch_T0000900:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9967702	9967846	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00642_ch_T0000900;gene_id=HG00642_ch_G0000282;Parent=HG00642_ch_T0000900;transcript_name=HG00642_ch_T0000900;gene_name=ENSG00000290344;ID=exon:HG00642_ch_T0000900:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9955068	9966766	.	-	.	source_gene_common_name=RBMY2QP;source_gene=ENSG00000236718.5;gene_id=HG00642_ch_G0000283;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2QP;gene_sources=liftoff;ID=HG00642_ch_G0000283;Name=RBMY2QP
HG00642_chrY	CAT	transcript	9955068	9966766	1000	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_G0000283;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=HG00642_ch_T0000897;Name=RBMY2QP
HG00642_chrY	CAT	exon	9955068	9955368	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955369	9955773	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955774	9955862	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9955863	9955948	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9955949	9956059	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9956060	9956935	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9956936	9957050	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9957051	9959088	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9959089	9959240	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9959241	9962967	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9962968	9963145	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9963146	9966133	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966134	9966234	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9966235	9966666	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=intron:HG00642_ch_T0000897:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9966667	9966766	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00642_ch_T0000897;gene_id=HG00642_ch_G0000283;Parent=HG00642_ch_T0000897;transcript_name=HG00642_ch_T0000897;gene_name=RBMY2QP;ID=exon:HG00642_ch_T0000897:7;Name=RBMY2QP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9968774	9970954	.	+	.	source_gene_common_name=TSPY20P;source_gene=ENSG00000243643.1;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;gene_id=HG00642_ch_G0000284;gene_biotype=unprocessed_pseudogene;gene_name=TSPY20P;gene_sources=liftoff;ID=HG00642_ch_G0000284;Name=TSPY20P
HG00642_chrY	CAT	transcript	9968774	9970954	1000	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_G0000284;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=HG00642_ch_T0000901;Name=TSPY20P
HG00642_chrY	CAT	exon	9968774	9969131	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=exon:HG00642_ch_T0000901:0;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9969132	9970477	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=intron:HG00642_ch_T0000901:0;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9970478	9970546	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=exon:HG00642_ch_T0000901:1;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9970547	9970641	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=intron:HG00642_ch_T0000901:1;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9970642	9970787	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=exon:HG00642_ch_T0000901:2;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9970788	9970897	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=intron:HG00642_ch_T0000901:2;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9970898	9970954	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG00642_ch_T0000901;gene_id=HG00642_ch_G0000284;Parent=HG00642_ch_T0000901;transcript_name=HG00642_ch_T0000901;gene_name=TSPY20P;ID=exon:HG00642_ch_T0000901:3;Name=TSPY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9999135	9999967	.	-	.	source_gene_common_name=ENSG00000290378;source_gene=ENSG00000290378.1;gene_id=HG00642_ch_G0000285;gene_biotype=lncRNA;gene_name=ENSG00000290378;gene_sources=liftoff;ID=HG00642_ch_G0000285;Name=ENSG00000290378
HG00642_chrY	CAT	transcript	9999135	9999967	1000	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00642_ch_T0000902;gene_id=HG00642_ch_G0000285;Parent=HG00642_ch_G0000285;transcript_name=HG00642_ch_T0000902;gene_name=ENSG00000290378;ID=HG00642_ch_T0000902;Name=ENSG00000290378
HG00642_chrY	CAT	exon	9999135	9999190	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00642_ch_T0000902;gene_id=HG00642_ch_G0000285;Parent=HG00642_ch_T0000902;transcript_name=HG00642_ch_T0000902;gene_name=ENSG00000290378;ID=exon:HG00642_ch_T0000902:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9999191	9999881	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00642_ch_T0000902;gene_id=HG00642_ch_G0000285;Parent=HG00642_ch_T0000902;transcript_name=HG00642_ch_T0000902;gene_name=ENSG00000290378;ID=intron:HG00642_ch_T0000902:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9999882	9999967	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00642_ch_T0000902;gene_id=HG00642_ch_G0000285;Parent=HG00642_ch_T0000902;transcript_name=HG00642_ch_T0000902;gene_name=ENSG00000290378;ID=exon:HG00642_ch_T0000902:1;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	9999168	10001732	.	-	.	source_gene_common_name=TSPY5P;source_gene=ENSG00000225685.2;gene_id=HG00642_ch_G0000286;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY5P;gene_sources=liftoff;ID=HG00642_ch_G0000286;Name=TSPY5P
HG00642_chrY	CAT	transcript	9999168	10001732	1000	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_G0000286;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=HG00642_ch_T0000903;Name=TSPY5P
HG00642_chrY	CAT	exon	9999168	9999190	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:0;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9999191	9999881	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=intron:HG00642_ch_T0000903:0;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	9999882	9999963	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:1;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	9999964	10000069	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=intron:HG00642_ch_T0000903:1;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	10000070	10000215	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:2;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	10000216	10000312	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=intron:HG00642_ch_T0000903:2;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	10000313	10000424	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:3;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	10000425	10000552	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=intron:HG00642_ch_T0000903:3;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	10000553	10000630	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:4;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	10000631	10001237	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=intron:HG00642_ch_T0000903:4;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	10001238	10001732	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00642_ch_T0000903;gene_id=HG00642_ch_G0000286;Parent=HG00642_ch_T0000903;transcript_name=HG00642_ch_T0000903;gene_name=TSPY5P;ID=exon:HG00642_ch_T0000903:5;Name=TSPY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10002712	10002990	.	+	.	source_gene_common_name=ENSG00000278478;source_gene=ENSG00000278478.1;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;gene_id=HG00642_ch_G0000287;gene_biotype=processed_pseudogene;gene_name=ENSG00000278478;gene_sources=liftoff;ID=HG00642_ch_G0000287;Name=ENSG00000278478
HG00642_chrY	CAT	transcript	10002712	10002990	1000	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=HG00642_ch_T0000904;gene_id=HG00642_ch_G0000287;Parent=HG00642_ch_G0000287;transcript_name=HG00642_ch_T0000904;gene_name=ENSG00000278478;ID=HG00642_ch_T0000904;Name=ENSG00000278478
HG00642_chrY	CAT	exon	10002712	10002990	.	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=HG00642_ch_T0000904;gene_id=HG00642_ch_G0000287;Parent=HG00642_ch_T0000904;transcript_name=HG00642_ch_T0000904;gene_name=ENSG00000278478;ID=exon:HG00642_ch_T0000904:0;Name=ENSG00000278478;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10022991	10023109	.	-	.	source_gene_common_name=RNA5SP518;source_gene=ENSG00000251766.1;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;gene_id=HG00642_ch_G0000288;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP518;gene_sources=liftoff;ID=HG00642_ch_G0000288;Name=RNA5SP518
HG00642_chrY	CAT	transcript	10022991	10023109	1000	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=HG00642_ch_T0000905;gene_id=HG00642_ch_G0000288;Parent=HG00642_ch_G0000288;transcript_name=HG00642_ch_T0000905;gene_name=RNA5SP518;ID=HG00642_ch_T0000905;Name=RNA5SP518
HG00642_chrY	CAT	exon	10022991	10023109	.	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=HG00642_ch_T0000905;gene_id=HG00642_ch_G0000288;Parent=HG00642_ch_T0000905;transcript_name=HG00642_ch_T0000905;gene_name=RNA5SP518;ID=exon:HG00642_ch_T0000905:0;Name=RNA5SP518;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10025456	10025574	.	-	.	source_gene_common_name=RNA5SP519;source_gene=ENSG00000252289.1;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;gene_id=HG00642_ch_G0000289;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP519;gene_sources=liftoff;ID=HG00642_ch_G0000289;Name=RNA5SP519
HG00642_chrY	CAT	transcript	10025456	10025574	1000	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=HG00642_ch_T0000906;gene_id=HG00642_ch_G0000289;Parent=HG00642_ch_G0000289;transcript_name=HG00642_ch_T0000906;gene_name=RNA5SP519;ID=HG00642_ch_T0000906;Name=RNA5SP519
HG00642_chrY	CAT	exon	10025456	10025574	.	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=HG00642_ch_T0000906;gene_id=HG00642_ch_G0000289;Parent=HG00642_ch_T0000906;transcript_name=HG00642_ch_T0000906;gene_name=RNA5SP519;ID=exon:HG00642_ch_T0000906:0;Name=RNA5SP519;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10104171	10105306	.	-	.	source_gene_common_name=DUX4L31;source_gene=ENSG00000231411.1;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;gene_id=HG00642_ch_G0000290;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L31;gene_sources=liftoff;ID=HG00642_ch_G0000290;Name=DUX4L31
HG00642_chrY	CAT	transcript	10104171	10105306	1000	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=HG00642_ch_T0000907;gene_id=HG00642_ch_G0000290;Parent=HG00642_ch_G0000290;transcript_name=HG00642_ch_T0000907;gene_name=DUX4L31;ID=HG00642_ch_T0000907;Name=DUX4L31
HG00642_chrY	CAT	exon	10104171	10105306	.	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=HG00642_ch_T0000907;gene_id=HG00642_ch_G0000290;Parent=HG00642_ch_T0000907;transcript_name=HG00642_ch_T0000907;gene_name=DUX4L31;ID=exon:HG00642_ch_T0000907:0;Name=DUX4L31;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10106434	10106788	.	+	.	source_gene_common_name=PCMTD1P1;source_gene=ENSG00000226061.1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;gene_id=HG00642_ch_G0000291;gene_biotype=unprocessed_pseudogene;gene_name=PCMTD1P1;gene_sources=liftoff;ID=HG00642_ch_G0000291;Name=PCMTD1P1
HG00642_chrY	CAT	transcript	10106434	10106788	1000	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=HG00642_ch_T0000908;gene_id=HG00642_ch_G0000291;Parent=HG00642_ch_G0000291;transcript_name=HG00642_ch_T0000908;gene_name=PCMTD1P1;ID=HG00642_ch_T0000908;Name=PCMTD1P1
HG00642_chrY	CAT	exon	10106434	10106788	.	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=HG00642_ch_T0000908;gene_id=HG00642_ch_G0000291;Parent=HG00642_ch_T0000908;transcript_name=HG00642_ch_T0000908;gene_name=PCMTD1P1;ID=exon:HG00642_ch_T0000908:0;Name=PCMTD1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10122965	10124886	.	-	.	source_gene_common_name=CDC27P2;source_gene=ENSG00000237447.1;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;gene_id=HG00642_ch_G0000292;gene_biotype=processed_pseudogene;gene_name=CDC27P2;gene_sources=liftoff;ID=HG00642_ch_G0000292;Name=CDC27P2
HG00642_chrY	CAT	transcript	10122965	10124886	1000	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=HG00642_ch_T0000909;gene_id=HG00642_ch_G0000292;Parent=HG00642_ch_G0000292;transcript_name=HG00642_ch_T0000909;gene_name=CDC27P2;ID=HG00642_ch_T0000909;Name=CDC27P2
HG00642_chrY	CAT	exon	10122965	10124886	.	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=HG00642_ch_T0000909;gene_id=HG00642_ch_G0000292;Parent=HG00642_ch_T0000909;transcript_name=HG00642_ch_T0000909;gene_name=CDC27P2;ID=exon:HG00642_ch_T0000909:0;Name=CDC27P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10129844	10131691	.	-	.	source_gene_common_name=ENSG00000225840;source_gene=ENSG00000225840.2;alternative_source_transcripts=ENST00000445125.2;gene_id=HG00642_ch_G0000293;gene_biotype=processed_pseudogene;gene_name=ENSG00000225840;gene_sources=liftoff;ID=HG00642_ch_G0000293;Name=ENSG00000225840
HG00642_chrY	CAT	transcript	10129844	10131691	1000	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG00642_ch_T0000910;gene_id=HG00642_ch_G0000293;Parent=HG00642_ch_G0000293;transcript_name=HG00642_ch_T0000910;gene_name=ENSG00000225840;ID=HG00642_ch_T0000910;Name=ENSG00000225840
HG00642_chrY	CAT	exon	10129844	10131691	.	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG00642_ch_T0000910;gene_id=HG00642_ch_G0000293;Parent=HG00642_ch_T0000910;transcript_name=HG00642_ch_T0000910;gene_name=ENSG00000225840;ID=exon:HG00642_ch_T0000910:0;Name=ENSG00000225840;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10132743	10132894	.	+	.	source_gene_common_name=RNA5-8SP6;source_gene=ENSG00000251705.1;alternative_source_transcripts=ENST00000515896.1;gene_id=HG00642_ch_G0000294;gene_biotype=rRNA_pseudogene;gene_name=RNA5-8SP6;gene_sources=liftoff;ID=HG00642_ch_G0000294;Name=RNA5-8SP6
HG00642_chrY	CAT	transcript	10132743	10132894	1000	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG00642_ch_T0000911;gene_id=HG00642_ch_G0000294;Parent=HG00642_ch_G0000294;transcript_name=HG00642_ch_T0000911;gene_name=RNA5-8SP6;ID=HG00642_ch_T0000911;Name=RNA5-8SP6
HG00642_chrY	CAT	exon	10132743	10132894	.	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG00642_ch_T0000911;gene_id=HG00642_ch_G0000294;Parent=HG00642_ch_T0000911;transcript_name=HG00642_ch_T0000911;gene_name=RNA5-8SP6;ID=exon:HG00642_ch_T0000911:0;Name=RNA5-8SP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10952642	10952863	.	-	.	source_gene_common_name=ENSG00000273858;source_gene=ENSG00000273858.1;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;gene_id=HG00642_ch_G0000295;gene_biotype=processed_pseudogene;gene_name=ENSG00000273858;gene_sources=liftoff;ID=HG00642_ch_G0000295;Name=ENSG00000273858
HG00642_chrY	CAT	transcript	10952642	10952863	1000	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG00642_ch_T0000912;gene_id=HG00642_ch_G0000295;Parent=HG00642_ch_G0000295;transcript_name=HG00642_ch_T0000912;gene_name=ENSG00000273858;ID=HG00642_ch_T0000912;Name=ENSG00000273858
HG00642_chrY	CAT	exon	10952642	10952863	.	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG00642_ch_T0000912;gene_id=HG00642_ch_G0000295;Parent=HG00642_ch_T0000912;transcript_name=HG00642_ch_T0000912;gene_name=ENSG00000273858;ID=exon:HG00642_ch_T0000912:0;Name=ENSG00000273858;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	10995798	10996383	.	-	.	source_gene_common_name=CDRT15P10;source_gene=ENSG00000273693.1;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;gene_id=HG00642_ch_G0000296;gene_biotype=processed_pseudogene;gene_name=CDRT15P10;gene_sources=liftoff;ID=HG00642_ch_G0000296;Name=CDRT15P10
HG00642_chrY	CAT	transcript	10995798	10996383	1000	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=199.829;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG00642_ch_T0000913;gene_id=HG00642_ch_G0000296;Parent=HG00642_ch_G0000296;transcript_name=HG00642_ch_T0000913;gene_name=CDRT15P10;ID=HG00642_ch_T0000913;Name=CDRT15P10
HG00642_chrY	CAT	exon	10995798	10996383	.	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=199.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG00642_ch_T0000913;gene_id=HG00642_ch_G0000296;Parent=HG00642_ch_T0000913;transcript_name=HG00642_ch_T0000913;gene_name=CDRT15P10;ID=exon:HG00642_ch_T0000913:0;Name=CDRT15P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11017385	11017583	.	-	.	source_gene_common_name=ENSG00000271365;source_gene=ENSG00000271365.1;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;gene_id=HG00642_ch_G0000297;gene_biotype=processed_pseudogene;gene_name=ENSG00000271365;gene_sources=liftoff;ID=HG00642_ch_G0000297;Name=ENSG00000271365
HG00642_chrY	CAT	transcript	11017385	11017583	1000	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG00642_ch_T0000914;gene_id=HG00642_ch_G0000297;Parent=HG00642_ch_G0000297;transcript_name=HG00642_ch_T0000914;gene_name=ENSG00000271365;ID=HG00642_ch_T0000914;Name=ENSG00000271365
HG00642_chrY	CAT	exon	11017385	11017583	.	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG00642_ch_T0000914;gene_id=HG00642_ch_G0000297;Parent=HG00642_ch_T0000914;transcript_name=HG00642_ch_T0000914;gene_name=ENSG00000271365;ID=exon:HG00642_ch_T0000914:0;Name=ENSG00000271365;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11017709	11017916	.	-	.	source_gene_common_name=ENSG00000271309;source_gene=ENSG00000271309.1;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;gene_id=HG00642_ch_G0000298;gene_biotype=processed_pseudogene;gene_name=ENSG00000271309;gene_sources=liftoff;ID=HG00642_ch_G0000298;Name=ENSG00000271309
HG00642_chrY	CAT	transcript	11017709	11017916	1000	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG00642_ch_T0000915;gene_id=HG00642_ch_G0000298;Parent=HG00642_ch_G0000298;transcript_name=HG00642_ch_T0000915;gene_name=ENSG00000271309;ID=HG00642_ch_T0000915;Name=ENSG00000271309
HG00642_chrY	CAT	exon	11017709	11017916	.	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG00642_ch_T0000915;gene_id=HG00642_ch_G0000298;Parent=HG00642_ch_T0000915;transcript_name=HG00642_ch_T0000915;gene_name=ENSG00000271309;ID=exon:HG00642_ch_T0000915:0;Name=ENSG00000271309;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11018039	11018207	.	-	.	source_gene_common_name=ENSG00000270570;source_gene=ENSG00000270570.1;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;gene_id=HG00642_ch_G0000299;gene_biotype=processed_pseudogene;gene_name=ENSG00000270570;gene_sources=liftoff;ID=HG00642_ch_G0000299;Name=ENSG00000270570
HG00642_chrY	CAT	transcript	11018039	11018207	1000	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG00642_ch_T0000916;gene_id=HG00642_ch_G0000299;Parent=HG00642_ch_G0000299;transcript_name=HG00642_ch_T0000916;gene_name=ENSG00000270570;ID=HG00642_ch_T0000916;Name=ENSG00000270570
HG00642_chrY	CAT	exon	11018039	11018207	.	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG00642_ch_T0000916;gene_id=HG00642_ch_G0000299;Parent=HG00642_ch_T0000916;transcript_name=HG00642_ch_T0000916;gene_name=ENSG00000270570;ID=exon:HG00642_ch_T0000916:0;Name=ENSG00000270570;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11026606	11125314	.	-	.	source_gene_common_name=ENSG00000291032;source_gene=ENSG00000291032.2;gene_id=HG00642_ch_G0000300;gene_biotype=lncRNA;gene_name=ENSG00000291032;gene_sources=liftoff;ID=HG00642_ch_G0000300;Name=ENSG00000291032
HG00642_chrY	CAT	transcript	11026606	11125313	1000	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=HG00642_ch_T0000917;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11026606	11026755	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000917:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11026756	11053630	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000917:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11053631	11053665	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000917:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11053666	11123033	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000917:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000917:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000917:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000917;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000917;transcript_name=HG00642_ch_T0000917;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000917:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11034516	11125317	1000	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=HG00642_ch_T0000918;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11034516	11034639	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000918;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000918:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11034640	11123033	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000918;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000918:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000918;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000918:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000918;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000918:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125317	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000918;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000918;transcript_name=HG00642_ch_T0000918;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000918:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11037438	11125313	1000	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=HG00642_ch_T0000919;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11037438	11037696	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000919;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000919:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11037697	11123033	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000919;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000919:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000919;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000919:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000919;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000919:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000919;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000919;transcript_name=HG00642_ch_T0000919;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000919:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11037443	11123092	1000	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=HG00642_ch_T0000920;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11037443	11037696	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000920;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000920:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11037697	11053630	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000920;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000920:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11053631	11053665	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000920;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000920:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11053666	11123033	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000920;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000920:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000920;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000920;transcript_name=HG00642_ch_T0000920;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000920:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064089	11125316	1000	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=HG00642_ch_T0000922;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064089	11064397	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000922:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064398	11065950	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000922:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000922:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000922:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000922:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000922:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125316	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000922;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000922;transcript_name=HG00642_ch_T0000922;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000922:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064089	11125313	1000	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=HG00642_ch_T0000923;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064089	11064367	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000923:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064368	11064891	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000923:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11064892	11064912	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000923:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064913	11065950	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000923:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000923:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000923:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000923:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000923:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000923;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000923;transcript_name=HG00642_ch_T0000923;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000923:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064094	11125266	1000	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=HG00642_ch_T0000924;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064094	11064397	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000924;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000924:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064398	11123033	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000924;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000924:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000924;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000924:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000924;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000924:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125266	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000924;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000924;transcript_name=HG00642_ch_T0000924;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000924:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064094	11125289	1000	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=HG00642_ch_T0000925;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064094	11064397	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064398	11064891	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000925:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11064892	11065079	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11065080	11065182	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000925:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065183	11065460	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11065461	11065950	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000925:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000925:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000925:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125289	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000925;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000925;transcript_name=HG00642_ch_T0000925;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000925:5;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064094	11125308	1000	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=HG00642_ch_T0000926;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064094	11064367	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000926:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064368	11065950	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000926:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000926:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000926:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000926:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000926:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000926;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000926;transcript_name=HG00642_ch_T0000926;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000926:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064097	11125266	1000	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=HG00642_ch_T0000927;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064097	11065079	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000927:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11065080	11065950	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000927:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000927:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000927:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000927:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000927:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125266	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000927;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000927;transcript_name=HG00642_ch_T0000927;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000927:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11064098	11125308	1000	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=HG00642_ch_T0000928;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11064098	11064397	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000928:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064398	11065182	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000928:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065183	11065337	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000928:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11065338	11065950	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000928:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000928:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000928:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000928:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000928:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000928;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000928;transcript_name=HG00642_ch_T0000928;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000928:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11065786	11125295	1000	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=HG00642_ch_T0000930;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11065786	11066181	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000930;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000930:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11123033	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000930;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000930:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000930;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000930:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000930;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000930:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125295	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000930;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000930;transcript_name=HG00642_ch_T0000930;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000930:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11071939	11125411	1000	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=HG00642_ch_T0000931;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11071939	11073434	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000931;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000931:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000931;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000931:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000931;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000931:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000931;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000931:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125411	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000931;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000931;transcript_name=HG00642_ch_T0000931;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000931:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11071946	11125497	1000	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=HG00642_ch_T0000932;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11071946	11073423	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000932;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000932:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073424	11123033	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000932;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000932:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000932;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000932:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000932;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000932:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125497	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000932;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000932;transcript_name=HG00642_ch_T0000932;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000932:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072044	11125329	1000	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=HG00642_ch_T0000933;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072044	11072836	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000933:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11072837	11073205	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000933:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11073206	11073434	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000933:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000933:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000933:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000933:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125329	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000933;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000933;transcript_name=HG00642_ch_T0000933;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000933:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125314	1000	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=HG00642_ch_T0000934;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073434	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000934;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000934:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000934;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000934:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000934;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000934:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125231	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000934;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000934:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125232	11125314	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000934;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000934;transcript_name=HG00642_ch_T0000934;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000934:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125241	1000	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=HG00642_ch_T0000935;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073434	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000935;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000935:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000935;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000935:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000935;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000935:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125020	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000935;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000935:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125021	11125241	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000935;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000935;transcript_name=HG00642_ch_T0000935;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000935:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125308	1000	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=HG00642_ch_T0000936;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073434	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000936:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000936:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000936:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124366	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000936:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124367	11124454	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000936:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124455	11125227	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000936:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000936;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000936;transcript_name=HG00642_ch_T0000936;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000936:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125277	1000	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=HG00642_ch_T0000937;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073423	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000937:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073424	11123033	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000937:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000937:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000937:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124745	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000937:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124746	11125227	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000937:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125277	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000937;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000937;transcript_name=HG00642_ch_T0000937;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000937:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125308	1000	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=HG00642_ch_T0000938;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073434	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000938:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000938:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000938:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000938:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124745	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000938:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124746	11125227	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000938:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000938;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000938;transcript_name=HG00642_ch_T0000938;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000938:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072142	11125095	1000	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=HG00642_ch_T0000939;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072142	11073434	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000939;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000939:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000939;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000939:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000939;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000939:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124504	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000939;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000939:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124505	11125095	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000939;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000939;transcript_name=HG00642_ch_T0000939;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000939:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072680	11125270	1000	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=HG00642_ch_T0000940;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072680	11072836	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000940:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11072837	11073205	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000940:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11073206	11073434	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000940:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11119975	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000940:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11119976	11120035	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000940:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11120036	11123033	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000940:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000940:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000940:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125270	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000940;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000940;transcript_name=HG00642_ch_T0000940;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000940:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11072680	11125314	1000	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=HG00642_ch_T0000941;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11072680	11072836	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000941:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11072837	11073205	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000941:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11073206	11073259	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000941:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073260	11073372	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000941:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11073373	11073434	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000941:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000941:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000941:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000941:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125314	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000941;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000941;transcript_name=HG00642_ch_T0000941;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000941:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073114	11125287	1000	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=HG00642_ch_T0000942;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073114	11073434	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11119975	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11119976	11120035	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11120036	11123033	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125287	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000942;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000942;transcript_name=HG00642_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000942:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073114	11125308	1000	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=HG00642_ch_T0000943;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073114	11073259	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073260	11073372	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11073373	11073434	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000943:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000943:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000943;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000943;transcript_name=HG00642_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000943:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073114	11124782	1000	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=HG00642_ch_T0000944;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073114	11073434	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000944;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000944;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000944;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000944;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124782	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000944;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000944;transcript_name=HG00642_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000944:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073151	11125308	1000	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=HG00642_ch_T0000945;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073151	11073434	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11089118	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11089119	11089321	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11089322	11123033	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000945:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000945:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000945;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000945;transcript_name=HG00642_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000945:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073151	11125273	1000	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=HG00642_ch_T0000946;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073151	11073434	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000946:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000946:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000946:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124504	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000946:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124505	11124745	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000946:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124746	11125227	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000946:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125273	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000946;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000946;transcript_name=HG00642_ch_T0000946;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000946:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11073151	11125295	1000	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=HG00642_ch_T0000947;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11073151	11073434	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11073435	11123033	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124504	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124505	11124524	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000947:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124525	11125227	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000947:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125295	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000947;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000947;transcript_name=HG00642_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000947:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11076248	11125317	1000	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=HG00642_ch_T0000948;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11076248	11077514	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000948;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11077515	11123033	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000948;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000948;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000948;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125317	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000948;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000948;transcript_name=HG00642_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000948:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11077271	11124745	1000	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=HG00642_ch_T0000949;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11077271	11077514	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000949;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11077515	11123033	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000949;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000949;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000949;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124745	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000949;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000949;transcript_name=HG00642_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000949:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11077273	11124745	1000	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=HG00642_ch_T0000950;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11077273	11077514	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11077515	11119975	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11119976	11120035	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11120036	11123033	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124745	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000950;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000950;transcript_name=HG00642_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000950:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11077602	11125268	1000	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=HG00642_ch_T0000951;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11077602	11077941	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000951;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11077942	11123033	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000951;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000951;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000951;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125268	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000951;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000951;transcript_name=HG00642_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000951:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11079875	11125313	1000	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=HG00642_ch_T0000952;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11079875	11080679	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000952;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11080680	11123033	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000952;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000952;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000952;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000952;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000952;transcript_name=HG00642_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000952:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11083448	11125314	1000	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=HG00642_ch_T0000953;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11083448	11083674	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000953;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11083675	11123033	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000953;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000953;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000953;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125314	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000953;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000953;transcript_name=HG00642_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000953:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11088843	11125295	1000	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=HG00642_ch_T0000956;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11088843	11089321	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000956;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11089322	11123033	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000956;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000956;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000956;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125295	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000956;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000956;transcript_name=HG00642_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000956:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11113616	11125313	1000	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=HG00642_ch_T0000957;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11113616	11113816	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11113817	11119975	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11119976	11120035	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11120036	11123033	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000957:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000957:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000957;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000957;transcript_name=HG00642_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000957:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11116692	11125313	1000	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=HG00642_ch_T0000958;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11116692	11116971	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000958;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11116972	11123033	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000958;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000958;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000958;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000958;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000958;transcript_name=HG00642_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000958:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11119827	11125308	1000	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=HG00642_ch_T0000959;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11119827	11120035	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000959;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000959:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11120036	11123033	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000959;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000959:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11123034	11123092	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000959;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000959:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000959;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000959:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125308	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000959;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000959;transcript_name=HG00642_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000959:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11121922	11125313	1000	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000960;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000960;gene_name=ENSG00000291032;ID=HG00642_ch_T0000960;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11121922	11123092	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000960;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000960;transcript_name=HG00642_ch_T0000960;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000960:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11125227	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000960;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000960;transcript_name=HG00642_ch_T0000960;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000960:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125313	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000960;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000960;transcript_name=HG00642_ch_T0000960;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000960:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11121922	11125268	1000	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=HG00642_ch_T0000961;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11121922	11123092	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000961;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124635	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000961;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124636	11124745	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000961;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11124746	11125227	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000961;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11125228	11125268	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000961;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000961;transcript_name=HG00642_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000961:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	11123057	11125241	1000	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000962;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_G0000300;transcript_name=HG00642_ch_T0000962;gene_name=ENSG00000291032;ID=HG00642_ch_T0000962;Name=ENSG00000291032
HG00642_chrY	CAT	exon	11123057	11123092	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000962;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000962;transcript_name=HG00642_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11123093	11124366	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000962;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000962;transcript_name=HG00642_ch_T0000962;gene_name=ENSG00000291032;ID=intron:HG00642_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11124367	11125241	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00642_ch_T0000962;gene_id=HG00642_ch_G0000300;Parent=HG00642_ch_T0000962;transcript_name=HG00642_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00642_ch_T0000962:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11054546	11054788	.	+	.	source_gene_common_name=ENSG00000274231;source_gene=ENSG00000274231.1;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;gene_id=HG00642_ch_G0000301;gene_biotype=processed_pseudogene;gene_name=ENSG00000274231;gene_sources=liftoff;ID=HG00642_ch_G0000301;Name=ENSG00000274231
HG00642_chrY	CAT	transcript	11054546	11054788	1000	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG00642_ch_T0000921;gene_id=HG00642_ch_G0000301;Parent=HG00642_ch_G0000301;transcript_name=HG00642_ch_T0000921;gene_name=ENSG00000274231;ID=HG00642_ch_T0000921;Name=ENSG00000274231
HG00642_chrY	CAT	exon	11054546	11054788	.	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG00642_ch_T0000921;gene_id=HG00642_ch_G0000301;Parent=HG00642_ch_T0000921;transcript_name=HG00642_ch_T0000921;gene_name=ENSG00000274231;ID=exon:HG00642_ch_T0000921:0;Name=ENSG00000274231;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11064155	11069310	.	-	.	source_gene_common_name=ENSG00000278212;source_gene=ENSG00000278212.5;gene_id=HG00642_ch_G0000302;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000278212;gene_sources=liftoff;ID=HG00642_ch_G0000302;Name=ENSG00000278212
HG00642_chrY	CAT	transcript	11064155	11069310	1000	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_G0000302;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=HG00642_ch_T0000929;Name=ENSG00000278212
HG00642_chrY	CAT	exon	11064155	11064367	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11064368	11065182	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=intron:HG00642_ch_T0000929:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065183	11065337	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11065338	11065950	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=intron:HG00642_ch_T0000929:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11065951	11066181	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066182	11066864	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=intron:HG00642_ch_T0000929:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11066865	11066985	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11066986	11067349	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=intron:HG00642_ch_T0000929:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11067350	11067420	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11067421	11068833	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=intron:HG00642_ch_T0000929:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11068834	11069310	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00642_ch_T0000929;gene_id=HG00642_ch_G0000302;Parent=HG00642_ch_T0000929;transcript_name=HG00642_ch_T0000929;gene_name=ENSG00000278212;ID=exon:HG00642_ch_T0000929:5;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11083915	11084118	.	+	.	source_gene_common_name=ANKRD20A6P;source_gene=ENSG00000274502.1;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;gene_id=HG00642_ch_G0000303;gene_biotype=processed_pseudogene;gene_name=ANKRD20A6P;gene_sources=liftoff;ID=HG00642_ch_G0000303;Name=ANKRD20A6P
HG00642_chrY	CAT	transcript	11083915	11084118	1000	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG00642_ch_T0000954;gene_id=HG00642_ch_G0000303;Parent=HG00642_ch_G0000303;transcript_name=HG00642_ch_T0000954;gene_name=ANKRD20A6P;ID=HG00642_ch_T0000954;Name=ANKRD20A6P
HG00642_chrY	CAT	exon	11083915	11084118	.	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG00642_ch_T0000954;gene_id=HG00642_ch_G0000303;Parent=HG00642_ch_T0000954;transcript_name=HG00642_ch_T0000954;gene_name=ANKRD20A6P;ID=exon:HG00642_ch_T0000954:0;Name=ANKRD20A6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11088597	11089107	.	+	.	source_gene_common_name=SNX18P1Y;source_gene=ENSG00000274162.1;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;gene_id=HG00642_ch_G0000304;gene_biotype=processed_pseudogene;gene_name=SNX18P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000304;Name=SNX18P1Y
HG00642_chrY	CAT	transcript	11088597	11089107	1000	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG00642_ch_T0000955;gene_id=HG00642_ch_G0000304;Parent=HG00642_ch_G0000304;transcript_name=HG00642_ch_T0000955;gene_name=SNX18P1Y;ID=HG00642_ch_T0000955;Name=SNX18P1Y
HG00642_chrY	CAT	exon	11088597	11089107	.	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG00642_ch_T0000955;gene_id=HG00642_ch_G0000304;Parent=HG00642_ch_T0000955;transcript_name=HG00642_ch_T0000955;gene_name=SNX18P1Y;ID=exon:HG00642_ch_T0000955:0;Name=SNX18P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11217210	11218473	.	+	.	source_gene_common_name=DUX4L16;source_gene=ENSG00000258567.1;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;gene_id=HG00642_ch_G0000305;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L16;gene_sources=liftoff;ID=HG00642_ch_G0000305;Name=DUX4L16
HG00642_chrY	CAT	transcript	11217210	11218473	1000	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG00642_ch_T0000963;gene_id=HG00642_ch_G0000305;Parent=HG00642_ch_G0000305;transcript_name=HG00642_ch_T0000963;gene_name=DUX4L16;ID=HG00642_ch_T0000963;Name=DUX4L16
HG00642_chrY	CAT	exon	11217210	11218473	.	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG00642_ch_T0000963;gene_id=HG00642_ch_G0000305;Parent=HG00642_ch_T0000963;transcript_name=HG00642_ch_T0000963;gene_name=DUX4L16;ID=exon:HG00642_ch_T0000963:0;Name=DUX4L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11225213	11226479	.	+	.	source_gene_common_name=DUX4L17;source_gene=ENSG00000259154.1;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;gene_id=HG00642_ch_G0000306;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L17;gene_sources=liftoff;ID=HG00642_ch_G0000306;Name=DUX4L17
HG00642_chrY	CAT	transcript	11225213	11226479	1000	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG00642_ch_T0000964;gene_id=HG00642_ch_G0000306;Parent=HG00642_ch_G0000306;transcript_name=HG00642_ch_T0000964;gene_name=DUX4L17;ID=HG00642_ch_T0000964;Name=DUX4L17
HG00642_chrY	CAT	exon	11225213	11226479	.	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG00642_ch_T0000964;gene_id=HG00642_ch_G0000306;Parent=HG00642_ch_T0000964;transcript_name=HG00642_ch_T0000964;gene_name=DUX4L17;ID=exon:HG00642_ch_T0000964:0;Name=DUX4L17;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11231849	11233115	.	+	.	source_gene_common_name=DUX4L18;source_gene=ENSG00000259029.1;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;gene_id=HG00642_ch_G0000307;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L18;gene_sources=liftoff;ID=HG00642_ch_G0000307;Name=DUX4L18
HG00642_chrY	CAT	transcript	11231849	11233115	1000	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG00642_ch_T0000965;gene_id=HG00642_ch_G0000307;Parent=HG00642_ch_G0000307;transcript_name=HG00642_ch_T0000965;gene_name=DUX4L18;ID=HG00642_ch_T0000965;Name=DUX4L18
HG00642_chrY	CAT	exon	11231849	11233115	.	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG00642_ch_T0000965;gene_id=HG00642_ch_G0000307;Parent=HG00642_ch_T0000965;transcript_name=HG00642_ch_T0000965;gene_name=DUX4L18;ID=exon:HG00642_ch_T0000965:0;Name=DUX4L18;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11242621	11243887	.	+	.	source_gene_common_name=DUX4L19;source_gene=ENSG00000258991.1;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;gene_id=HG00642_ch_G0000308;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L19;gene_sources=liftoff;ID=HG00642_ch_G0000308;Name=DUX4L19
HG00642_chrY	CAT	transcript	11242621	11243887	1000	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG00642_ch_T0000966;gene_id=HG00642_ch_G0000308;Parent=HG00642_ch_G0000308;transcript_name=HG00642_ch_T0000966;gene_name=DUX4L19;ID=HG00642_ch_T0000966;Name=DUX4L19
HG00642_chrY	CAT	exon	11242621	11243887	.	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG00642_ch_T0000966;gene_id=HG00642_ch_G0000308;Parent=HG00642_ch_T0000966;transcript_name=HG00642_ch_T0000966;gene_name=DUX4L19;ID=exon:HG00642_ch_T0000966:0;Name=DUX4L19;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11245919	11247985	.	+	.	source_gene_common_name=PABPC1P5;source_gene=ENSG00000270455.1;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;gene_id=HG00642_ch_G0000309;gene_biotype=processed_pseudogene;gene_name=PABPC1P5;gene_sources=liftoff;ID=HG00642_ch_G0000309;Name=PABPC1P5
HG00642_chrY	CAT	transcript	11245919	11247985	1000	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00642_ch_T0000967;gene_id=HG00642_ch_G0000309;Parent=HG00642_ch_G0000309;transcript_name=HG00642_ch_T0000967;gene_name=PABPC1P5;ID=HG00642_ch_T0000967;Name=PABPC1P5
HG00642_chrY	CAT	exon	11245919	11246087	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00642_ch_T0000967;gene_id=HG00642_ch_G0000309;Parent=HG00642_ch_T0000967;transcript_name=HG00642_ch_T0000967;gene_name=PABPC1P5;ID=exon:HG00642_ch_T0000967:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11246088	11246478	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00642_ch_T0000967;gene_id=HG00642_ch_G0000309;Parent=HG00642_ch_T0000967;transcript_name=HG00642_ch_T0000967;gene_name=PABPC1P5;ID=intron:HG00642_ch_T0000967:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11246479	11247985	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00642_ch_T0000967;gene_id=HG00642_ch_G0000309;Parent=HG00642_ch_T0000967;transcript_name=HG00642_ch_T0000967;gene_name=PABPC1P5;ID=exon:HG00642_ch_T0000967:1;Name=PABPC1P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11250871	11295977	.	-	.	source_gene_common_name=SLC9B1P1;source_gene=ENSG00000183704.7;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;gene_id=HG00642_ch_G0000310;gene_biotype=unprocessed_pseudogene;gene_name=SLC9B1P1;gene_sources=liftoff;ID=HG00642_ch_G0000310;Name=SLC9B1P1
HG00642_chrY	CAT	transcript	11250871	11295977	1000	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_G0000310;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=HG00642_ch_T0000968;Name=SLC9B1P1
HG00642_chrY	CAT	exon	11250871	11251086	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11251087	11255259	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11255260	11255396	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11255397	11256283	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11256284	11256392	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11256393	11260176	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11260177	11260326	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11260327	11261168	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11261169	11261275	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11261276	11279158	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11279159	11279334	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11279335	11291917	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11291918	11292045	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11292046	11293159	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11293160	11293302	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11293303	11295806	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=intron:HG00642_ch_T0000968:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11295807	11295977	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00642_ch_T0000968;gene_id=HG00642_ch_G0000310;Parent=HG00642_ch_T0000968;transcript_name=HG00642_ch_T0000968;gene_name=SLC9B1P1;ID=exon:HG00642_ch_T0000968:8;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11305993	11307370	.	+	.	source_gene_common_name=ACTR3BP1;source_gene=ENSG00000270242.1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;gene_id=HG00642_ch_G0000311;gene_biotype=processed_pseudogene;gene_name=ACTR3BP1;gene_sources=liftoff;ID=HG00642_ch_G0000311;Name=ACTR3BP1
HG00642_chrY	CAT	transcript	11305993	11307370	1000	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00642_ch_T0000969;gene_id=HG00642_ch_G0000311;Parent=HG00642_ch_G0000311;transcript_name=HG00642_ch_T0000969;gene_name=ACTR3BP1;ID=HG00642_ch_T0000969;Name=ACTR3BP1
HG00642_chrY	CAT	exon	11305993	11306033	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00642_ch_T0000969;gene_id=HG00642_ch_G0000311;Parent=HG00642_ch_T0000969;transcript_name=HG00642_ch_T0000969;gene_name=ACTR3BP1;ID=exon:HG00642_ch_T0000969:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11306034	11306164	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00642_ch_T0000969;gene_id=HG00642_ch_G0000311;Parent=HG00642_ch_T0000969;transcript_name=HG00642_ch_T0000969;gene_name=ACTR3BP1;ID=intron:HG00642_ch_T0000969:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11306165	11307370	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00642_ch_T0000969;gene_id=HG00642_ch_G0000311;Parent=HG00642_ch_T0000969;transcript_name=HG00642_ch_T0000969;gene_name=ACTR3BP1;ID=exon:HG00642_ch_T0000969:1;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11322842	11329010	.	+	.	source_gene_common_name=CHEK2P1;source_gene=ENSG00000275828.1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;gene_id=HG00642_ch_G0000312;gene_biotype=unprocessed_pseudogene;gene_name=CHEK2P1;gene_sources=liftoff;ID=HG00642_ch_G0000312;Name=CHEK2P1
HG00642_chrY	CAT	transcript	11322842	11329010	1000	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_G0000312;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=HG00642_ch_T0000970;Name=CHEK2P1
HG00642_chrY	CAT	exon	11322842	11322927	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_T0000970;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=exon:HG00642_ch_T0000970:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11322928	11327690	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_T0000970;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=intron:HG00642_ch_T0000970:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11327691	11327771	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_T0000970;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=exon:HG00642_ch_T0000970:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11327772	11328923	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_T0000970;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=intron:HG00642_ch_T0000970:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11328924	11329010	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00642_ch_T0000970;gene_id=HG00642_ch_G0000312;Parent=HG00642_ch_T0000970;transcript_name=HG00642_ch_T0000970;gene_name=CHEK2P1;ID=exon:HG00642_ch_T0000970:2;Name=CHEK2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11355714	11355860	.	-	.	source_gene_common_name=MTND1P12;source_gene=ENSG00000225433.3;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;gene_id=HG00642_ch_G0000313;gene_biotype=unprocessed_pseudogene;gene_name=MTND1P12;gene_sources=liftoff;ID=HG00642_ch_G0000313;Name=MTND1P12
HG00642_chrY	CAT	transcript	11355714	11355860	1000	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG00642_ch_T0000971;gene_id=HG00642_ch_G0000313;Parent=HG00642_ch_G0000313;transcript_name=HG00642_ch_T0000971;gene_name=MTND1P12;ID=HG00642_ch_T0000971;Name=MTND1P12
HG00642_chrY	CAT	exon	11355714	11355860	.	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG00642_ch_T0000971;gene_id=HG00642_ch_G0000313;Parent=HG00642_ch_T0000971;transcript_name=HG00642_ch_T0000971;gene_name=MTND1P12;ID=exon:HG00642_ch_T0000971:0;Name=MTND1P12;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11356004	11356397	.	-	.	source_gene_common_name=ENSG00000224567;source_gene=ENSG00000224567.2;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;gene_id=HG00642_ch_G0000314;gene_biotype=processed_pseudogene;gene_name=ENSG00000224567;gene_sources=liftoff;ID=HG00642_ch_G0000314;Name=ENSG00000224567
HG00642_chrY	CAT	transcript	11356004	11356397	1000	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG00642_ch_T0000972;gene_id=HG00642_ch_G0000314;Parent=HG00642_ch_G0000314;transcript_name=HG00642_ch_T0000972;gene_name=ENSG00000224567;ID=HG00642_ch_T0000972;Name=ENSG00000224567
HG00642_chrY	CAT	exon	11356004	11356397	.	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG00642_ch_T0000972;gene_id=HG00642_ch_G0000314;Parent=HG00642_ch_T0000972;transcript_name=HG00642_ch_T0000972;gene_name=ENSG00000224567;ID=exon:HG00642_ch_T0000972:0;Name=ENSG00000224567;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	11384025	11384535	.	-	.	source_gene_common_name=ENSG00000271375;source_gene=ENSG00000271375.1;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;gene_id=HG00642_ch_G0000315;gene_biotype=processed_pseudogene;gene_name=ENSG00000271375;gene_sources=liftoff;ID=HG00642_ch_G0000315;Name=ENSG00000271375
HG00642_chrY	CAT	transcript	11384025	11384535	1000	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00642_ch_T0000973;gene_id=HG00642_ch_G0000315;Parent=HG00642_ch_G0000315;transcript_name=HG00642_ch_T0000973;gene_name=ENSG00000271375;ID=HG00642_ch_T0000973;Name=ENSG00000271375
HG00642_chrY	CAT	exon	11384025	11384355	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00642_ch_T0000973;gene_id=HG00642_ch_G0000315;Parent=HG00642_ch_T0000973;transcript_name=HG00642_ch_T0000973;gene_name=ENSG00000271375;ID=exon:HG00642_ch_T0000973:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	11384356	11384477	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00642_ch_T0000973;gene_id=HG00642_ch_G0000315;Parent=HG00642_ch_T0000973;transcript_name=HG00642_ch_T0000973;gene_name=ENSG00000271375;ID=intron:HG00642_ch_T0000973:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	11384478	11384535	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00642_ch_T0000973;gene_id=HG00642_ch_G0000315;Parent=HG00642_ch_T0000973;transcript_name=HG00642_ch_T0000973;gene_name=ENSG00000271375;ID=exon:HG00642_ch_T0000973:1;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12479591	12481066	.	-	.	source_gene_common_name=RCC2P1;source_gene=ENSG00000234385.1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;gene_id=HG00642_ch_G0000316;gene_biotype=processed_pseudogene;gene_name=RCC2P1;gene_sources=liftoff;ID=HG00642_ch_G0000316;Name=RCC2P1
HG00642_chrY	CAT	transcript	12479591	12481066	1000	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG00642_ch_T0000974;gene_id=HG00642_ch_G0000316;Parent=HG00642_ch_G0000316;transcript_name=HG00642_ch_T0000974;gene_name=RCC2P1;ID=HG00642_ch_T0000974;Name=RCC2P1
HG00642_chrY	CAT	exon	12479591	12481066	.	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG00642_ch_T0000974;gene_id=HG00642_ch_G0000316;Parent=HG00642_ch_T0000974;transcript_name=HG00642_ch_T0000974;gene_name=RCC2P1;ID=exon:HG00642_ch_T0000974:0;Name=RCC2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12621067	12622300	.	-	.	source_gene_common_name=ASS1P6;source_gene=ENSG00000215583.3;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;gene_id=HG00642_ch_G0000317;gene_biotype=processed_pseudogene;gene_name=ASS1P6;gene_sources=liftoff;ID=HG00642_ch_G0000317;Name=ASS1P6
HG00642_chrY	CAT	transcript	12621067	12622300	1000	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG00642_ch_T0000975;gene_id=HG00642_ch_G0000317;Parent=HG00642_ch_G0000317;transcript_name=HG00642_ch_T0000975;gene_name=ASS1P6;ID=HG00642_ch_T0000975;Name=ASS1P6
HG00642_chrY	CAT	exon	12621067	12622300	.	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG00642_ch_T0000975;gene_id=HG00642_ch_G0000317;Parent=HG00642_ch_T0000975;transcript_name=HG00642_ch_T0000975;gene_name=ASS1P6;ID=exon:HG00642_ch_T0000975:0;Name=ASS1P6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12655712	12685912	.	+	.	source_gene_common_name=MXRA5Y;source_gene=ENSG00000235649.2;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;gene_id=HG00642_ch_G0000318;gene_biotype=unprocessed_pseudogene;gene_name=MXRA5Y;gene_sources=liftoff;ID=HG00642_ch_G0000318;Name=MXRA5Y
HG00642_chrY	CAT	transcript	12655712	12685912	1000	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_G0000318;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=HG00642_ch_T0000976;Name=MXRA5Y
HG00642_chrY	CAT	exon	12655712	12655903	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=exon:HG00642_ch_T0000976:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12655904	12666587	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=intron:HG00642_ch_T0000976:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12666588	12671545	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=exon:HG00642_ch_T0000976:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12671546	12677418	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=intron:HG00642_ch_T0000976:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12677419	12678383	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=exon:HG00642_ch_T0000976:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12678384	12684006	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=intron:HG00642_ch_T0000976:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12684007	12685912	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00642_ch_T0000976;gene_id=HG00642_ch_G0000318;Parent=HG00642_ch_T0000976;transcript_name=HG00642_ch_T0000976;gene_name=MXRA5Y;ID=exon:HG00642_ch_T0000976:3;Name=MXRA5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12904724	13120833	.	-	.	source_gene_common_name=ENSG00000291034;source_gene=ENSG00000291034.2;gene_id=HG00642_ch_G0000319;gene_biotype=lncRNA;gene_name=ENSG00000291034;gene_sources=liftoff;ID=HG00642_ch_G0000319;Name=ENSG00000291034
HG00642_chrY	CAT	transcript	12904724	13120798	1000	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=HG00642_ch_T0000977;Name=ENSG00000291034
HG00642_chrY	CAT	exon	12904724	12905591	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12905592	12940378	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12940379	12940416	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12940417	12952993	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12952994	12953115	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12953116	12956889	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12956890	12957039	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12957040	13106006	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000977:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120798	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000977;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000977;transcript_name=HG00642_ch_T0000977;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000977:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13025402	13120809	1000	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=HG00642_ch_T0000982;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13025402	13025685	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000982:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13025686	13106006	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000982:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000982:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000982:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000982:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000982:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120809	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000982;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000982;transcript_name=HG00642_ch_T0000982;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000982:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13038758	13120795	1000	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=HG00642_ch_T0000986;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13038758	13038965	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000986:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13038966	13106006	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000986:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000986:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000986:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000986:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000986:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120795	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000986;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000986;transcript_name=HG00642_ch_T0000986;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000986:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13053431	13120795	1000	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=HG00642_ch_T0000990;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13053431	13053790	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000990:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13053791	13106006	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000990:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000990:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000990:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000990:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000990:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120795	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000990;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000990;transcript_name=HG00642_ch_T0000990;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000990:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13053435	13119667	1000	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=HG00642_ch_T0000991;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13053435	13053790	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000991;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000991:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13053791	13106006	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000991;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000991:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000991;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000991:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000991;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000991:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119667	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000991;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000991;transcript_name=HG00642_ch_T0000991;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000991:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077737	13120833	1000	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=HG00642_ch_T0000992;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077737	13077965	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000992:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13106006	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000992:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000992:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000992:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000992:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000992:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120833	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000992;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000992;transcript_name=HG00642_ch_T0000992;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000992:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077737	13120540	1000	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=HG00642_ch_T0000993;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077737	13077965	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000993:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13106006	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000993:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000993:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000993:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000993:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120421	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000993:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120422	13120540	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000993;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000993;transcript_name=HG00642_ch_T0000993;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000993:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077737	13120770	1000	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=HG00642_ch_T0000994;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077737	13077965	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000994:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13106006	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000994:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000994:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000994:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000994:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120650	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000994:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120651	13120770	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000994;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000994;transcript_name=HG00642_ch_T0000994;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000994:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077737	13120773	1000	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=HG00642_ch_T0000995;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077737	13077965	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000995:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13081394	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000995:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13081395	13081543	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000995:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13081544	13106006	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000995:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000995:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000995:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000995:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120650	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000995:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120651	13120773	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000995;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000995;transcript_name=HG00642_ch_T0000995;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000995:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077750	13120788	1000	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=HG00642_ch_T0000996;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077750	13077965	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000996:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13097894	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000996:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13097895	13098032	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000996:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13098033	13106006	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000996:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000996:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000996:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000996:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000996:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120788	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000996;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000996;transcript_name=HG00642_ch_T0000996;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000996:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13077753	13120334	1000	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=HG00642_ch_T0000997;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13077753	13077965	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000997:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077966	13106006	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000997:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000997:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000997:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000997:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120278	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000997:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120279	13120334	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000997;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000997;transcript_name=HG00642_ch_T0000997;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000997:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13101203	13120795	1000	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=HG00642_ch_T0000998;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13101203	13101805	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000998:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13101806	13106006	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000998:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000998:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000998:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000998:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120760	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000998:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120761	13120795	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000998;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000998;transcript_name=HG00642_ch_T0000998;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000998:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13105329	13120585	1000	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=HG00642_ch_T0000999;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13105329	13105711	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000999:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13105712	13106006	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000999:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000999:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000999:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119665	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000999:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13119666	13120537	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0000999:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13120538	13120585	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0000999;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0000999;transcript_name=HG00642_ch_T0000999;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0000999:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13105334	13119583	1000	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_G0000319;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=HG00642_ch_T0001000;Name=ENSG00000291034
HG00642_chrY	CAT	exon	13105334	13105711	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0001000:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13105712	13106006	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0001000:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0001000:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13106403	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0001000:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13106404	13106520	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0001000:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106521	13119526	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=intron:HG00642_ch_T0001000:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119583	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001000;gene_id=HG00642_ch_G0000319;Parent=HG00642_ch_T0001000;transcript_name=HG00642_ch_T0001000;gene_name=ENSG00000291034;ID=exon:HG00642_ch_T0001000:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12943760	12944465	.	+	.	source_gene_common_name=RPS24P1;source_gene=ENSG00000236477.1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;gene_id=HG00642_ch_G0000320;gene_biotype=processed_pseudogene;gene_name=RPS24P1;gene_sources=liftoff;ID=HG00642_ch_G0000320;Name=RPS24P1
HG00642_chrY	CAT	transcript	12943760	12944465	1000	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00642_ch_T0000978;gene_id=HG00642_ch_G0000320;Parent=HG00642_ch_G0000320;transcript_name=HG00642_ch_T0000978;gene_name=RPS24P1;ID=HG00642_ch_T0000978;Name=RPS24P1
HG00642_chrY	CAT	exon	12943760	12943885	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00642_ch_T0000978;gene_id=HG00642_ch_G0000320;Parent=HG00642_ch_T0000978;transcript_name=HG00642_ch_T0000978;gene_name=RPS24P1;ID=exon:HG00642_ch_T0000978:0;Name=RPS24P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12943886	12944220	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00642_ch_T0000978;gene_id=HG00642_ch_G0000320;Parent=HG00642_ch_T0000978;transcript_name=HG00642_ch_T0000978;gene_name=RPS24P1;ID=intron:HG00642_ch_T0000978:0;Name=RPS24P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12944221	12944465	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00642_ch_T0000978;gene_id=HG00642_ch_G0000320;Parent=HG00642_ch_T0000978;transcript_name=HG00642_ch_T0000978;gene_name=RPS24P1;ID=exon:HG00642_ch_T0000978:1;Name=RPS24P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12951329	12957041	.	-	.	source_gene_common_name=ARSFP1;source_gene=ENSG00000232226.2;gene_id=HG00642_ch_G0000321;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSFP1;gene_sources=liftoff;ID=HG00642_ch_G0000321;Name=ARSFP1
HG00642_chrY	CAT	transcript	12951329	12957041	1000	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_G0000321;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=HG00642_ch_T0000979;Name=ARSFP1
HG00642_chrY	CAT	exon	12951329	12951526	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_T0000979;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=exon:HG00642_ch_T0000979:0;Name=ARSFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12951527	12952988	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_T0000979;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=intron:HG00642_ch_T0000979:0;Name=ARSFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12952989	12953115	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_T0000979;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=exon:HG00642_ch_T0000979:1;Name=ARSFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	12953116	12956889	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_T0000979;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=intron:HG00642_ch_T0000979:1;Name=ARSFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	12956890	12957041	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00642_ch_T0000979;gene_id=HG00642_ch_G0000321;Parent=HG00642_ch_T0000979;transcript_name=HG00642_ch_T0000979;gene_name=ARSFP1;ID=exon:HG00642_ch_T0000979:2;Name=ARSFP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	12972485	12972776	.	+	.	source_gene_common_name=RN7SL702P;source_gene=ENSG00000243980.3;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;gene_id=HG00642_ch_G0000322;gene_biotype=misc_RNA;gene_name=RN7SL702P;gene_sources=liftoff;ID=HG00642_ch_G0000322;Name=RN7SL702P
HG00642_chrY	CAT	transcript	12972485	12972776	1000	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG00642_ch_T0000980;gene_id=HG00642_ch_G0000322;Parent=HG00642_ch_G0000322;transcript_name=HG00642_ch_T0000980;gene_name=RN7SL702P;ID=HG00642_ch_T0000980;Name=RN7SL702P
HG00642_chrY	CAT	exon	12972485	12972776	.	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG00642_ch_T0000980;gene_id=HG00642_ch_G0000322;Parent=HG00642_ch_T0000980;transcript_name=HG00642_ch_T0000980;gene_name=RN7SL702P;ID=exon:HG00642_ch_T0000980:0;Name=RN7SL702P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13020642	13021854	.	+	.	source_gene_common_name=FAM8A4P;source_gene=ENSG00000232730.1;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;gene_id=HG00642_ch_G0000323;gene_biotype=processed_pseudogene;gene_name=FAM8A4P;gene_sources=liftoff;ID=HG00642_ch_G0000323;Name=FAM8A4P
HG00642_chrY	CAT	transcript	13020642	13021854	1000	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG00642_ch_T0000981;gene_id=HG00642_ch_G0000323;Parent=HG00642_ch_G0000323;transcript_name=HG00642_ch_T0000981;gene_name=FAM8A4P;ID=HG00642_ch_T0000981;Name=FAM8A4P
HG00642_chrY	CAT	exon	13020642	13021854	.	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG00642_ch_T0000981;gene_id=HG00642_ch_G0000323;Parent=HG00642_ch_T0000981;transcript_name=HG00642_ch_T0000981;gene_name=FAM8A4P;ID=exon:HG00642_ch_T0000981:0;Name=FAM8A4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13026661	13046701	.	+	.	source_gene_common_name=ENSG00000290435;source_gene=ENSG00000290435.2;gene_id=HG00642_ch_G0000324;gene_biotype=lncRNA;gene_name=ENSG00000290435;gene_sources=liftoff;ID=HG00642_ch_G0000324;Name=ENSG00000290435
HG00642_chrY	CAT	transcript	13026661	13046534	1000	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000983;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_G0000324;transcript_name=HG00642_ch_T0000983;gene_name=ENSG00000290435;ID=HG00642_ch_T0000983;Name=ENSG00000290435
HG00642_chrY	CAT	exon	13026661	13027062	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000983;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000983;transcript_name=HG00642_ch_T0000983;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000983:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13027063	13046154	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000983;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000983;transcript_name=HG00642_ch_T0000983;gene_name=ENSG00000290435;ID=intron:HG00642_ch_T0000983:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13046155	13046534	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000983;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000983;transcript_name=HG00642_ch_T0000983;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000983:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13026948	13038934	1000	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000984;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_G0000324;transcript_name=HG00642_ch_T0000984;gene_name=ENSG00000290435;ID=HG00642_ch_T0000984;Name=ENSG00000290435
HG00642_chrY	CAT	exon	13026948	13027062	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000984;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000984;transcript_name=HG00642_ch_T0000984;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000984:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13027063	13038831	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000984;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000984;transcript_name=HG00642_ch_T0000984;gene_name=ENSG00000290435;ID=intron:HG00642_ch_T0000984:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13038832	13038934	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000984;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000984;transcript_name=HG00642_ch_T0000984;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000984:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13031092	13046701	1000	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000985;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_G0000324;transcript_name=HG00642_ch_T0000985;gene_name=ENSG00000290435;ID=HG00642_ch_T0000985;Name=ENSG00000290435
HG00642_chrY	CAT	exon	13031092	13031311	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000985;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000985;transcript_name=HG00642_ch_T0000985;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000985:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13031312	13046154	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000985;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000985;transcript_name=HG00642_ch_T0000985;gene_name=ENSG00000290435;ID=intron:HG00642_ch_T0000985:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13046155	13046701	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000985;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000985;transcript_name=HG00642_ch_T0000985;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000985:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13044096	13046514	1000	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000988;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_G0000324;transcript_name=HG00642_ch_T0000988;gene_name=ENSG00000290435;ID=HG00642_ch_T0000988;Name=ENSG00000290435
HG00642_chrY	CAT	exon	13044096	13044234	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000988;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000988;transcript_name=HG00642_ch_T0000988;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000988:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13044235	13046154	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000988;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000988;transcript_name=HG00642_ch_T0000988;gene_name=ENSG00000290435;ID=intron:HG00642_ch_T0000988:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13046155	13046514	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00642_ch_T0000988;gene_id=HG00642_ch_G0000324;Parent=HG00642_ch_T0000988;transcript_name=HG00642_ch_T0000988;gene_name=ENSG00000290435;ID=exon:HG00642_ch_T0000988:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13038832	13046506	.	+	.	source_gene_common_name=ARSLP1;source_gene=ENSG00000224060.4;gene_id=HG00642_ch_G0000325;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSLP1;gene_sources=liftoff;ID=HG00642_ch_G0000325;Name=ARSLP1
HG00642_chrY	CAT	transcript	13038832	13046506	1000	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_G0000325;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=HG00642_ch_T0000987;Name=ARSLP1
HG00642_chrY	CAT	exon	13038832	13038994	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_T0000987;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=exon:HG00642_ch_T0000987:0;Name=ARSLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13038995	13040194	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_T0000987;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=intron:HG00642_ch_T0000987:0;Name=ARSLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13040195	13040314	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_T0000987;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=exon:HG00642_ch_T0000987:1;Name=ARSLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13040315	13046154	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_T0000987;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=intron:HG00642_ch_T0000987:1;Name=ARSLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13046155	13046506	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00642_ch_T0000987;gene_id=HG00642_ch_G0000325;Parent=HG00642_ch_T0000987;transcript_name=HG00642_ch_T0000987;gene_name=ARSLP1;ID=exon:HG00642_ch_T0000987:2;Name=ARSLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13053115	13086543	.	+	.	source_gene_common_name=ARSDP1;source_gene=ENSG00000225117.2;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;gene_id=HG00642_ch_G0000326;gene_biotype=unprocessed_pseudogene;gene_name=ARSDP1;gene_sources=liftoff;ID=HG00642_ch_G0000326;Name=ARSDP1
HG00642_chrY	CAT	transcript	13053115	13086543	1000	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_G0000326;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=HG00642_ch_T0000989;Name=ARSDP1
HG00642_chrY	CAT	exon	13053115	13053157	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:0;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13053158	13061243	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:0;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13061244	13061393	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:1;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13061394	13064958	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:1;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13064959	13065080	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:2;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13065081	13066215	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:2;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13066216	13066337	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:3;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13066338	13072881	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:3;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13072882	13073296	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:4;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13073297	13076901	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:4;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13076902	13077038	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:5;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13077039	13081551	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:5;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13081552	13081685	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:6;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13081686	13082356	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:6;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13082357	13082519	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:7;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13082520	13083524	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:7;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13083525	13083646	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:8;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13083647	13086184	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=intron:HG00642_ch_T0000989:8;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13086185	13086543	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00642_ch_T0000989;gene_id=HG00642_ch_G0000326;Parent=HG00642_ch_T0000989;transcript_name=HG00642_ch_T0000989;gene_name=ARSDP1;ID=exon:HG00642_ch_T0000989:9;Name=ARSDP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13106007	13119533	.	-	.	source_gene_common_name=GYG2P1;source_gene=ENSG00000206159.14;gene_id=HG00642_ch_G0000327;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG00642_ch_G0000327;Name=GYG2P1
HG00642_chrY	CAT	transcript	13106007	13119533	1000	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00642_ch_T0001001;gene_id=HG00642_ch_G0000327;Parent=HG00642_ch_G0000327;transcript_name=HG00642_ch_T0001001;gene_name=GYG2P1;ID=HG00642_ch_T0001001;Name=GYG2P1
HG00642_chrY	CAT	exon	13106007	13106148	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00642_ch_T0001001;gene_id=HG00642_ch_G0000327;Parent=HG00642_ch_T0001001;transcript_name=HG00642_ch_T0001001;gene_name=GYG2P1;ID=exon:HG00642_ch_T0001001:0;Name=GYG2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13106149	13119526	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00642_ch_T0001001;gene_id=HG00642_ch_G0000327;Parent=HG00642_ch_T0001001;transcript_name=HG00642_ch_T0001001;gene_name=GYG2P1;ID=intron:HG00642_ch_T0001001:0;Name=GYG2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13119527	13119533	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00642_ch_T0001001;gene_id=HG00642_ch_G0000327;Parent=HG00642_ch_T0001001;transcript_name=HG00642_ch_T0001001;gene_name=GYG2P1;ID=exon:HG00642_ch_T0001001:1;Name=GYG2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13139257	13206598	.	-	.	source_gene_common_name=XGY1;source_gene=ENSG00000227447.1;gene_id=HG00642_ch_G0000328;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XGY1;gene_sources=liftoff;ID=HG00642_ch_G0000328;Name=XGY1
HG00642_chrY	CAT	transcript	13139257	13206598	1000	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_G0000328;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=HG00642_ch_T0001002;Name=XGY1
HG00642_chrY	CAT	exon	13139257	13139373	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:0;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13139374	13142475	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:0;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13142476	13142511	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:1;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13142512	13155354	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:1;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13155355	13155405	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:2;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13155406	13158911	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:2;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13158912	13158969	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:3;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13158970	13167652	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:3;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13167653	13167715	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:4;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13167716	13183940	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:4;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13183941	13183964	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:5;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13183965	13187643	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:5;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13187644	13187679	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:6;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13187680	13206537	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=intron:HG00642_ch_T0001002:6;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13206538	13206598	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00642_ch_T0001002;gene_id=HG00642_ch_G0000328;Parent=HG00642_ch_T0001002;transcript_name=HG00642_ch_T0001002;gene_name=XGY1;ID=exon:HG00642_ch_T0001002:7;Name=XGY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13178003	13206945	.	-	.	source_gene_common_name=ENSG00000296286;source_gene=ENSG00000296286.1;gene_id=HG00642_ch_G0000329;gene_biotype=lncRNA;gene_name=ENSG00000296286;gene_sources=liftoff;ID=HG00642_ch_G0000329;Name=ENSG00000296286
HG00642_chrY	CAT	transcript	13178003	13206945	1000	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_G0000329;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=HG00642_ch_T0001003;Name=ENSG00000296286
HG00642_chrY	CAT	exon	13178003	13178498	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_T0001003;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=exon:HG00642_ch_T0001003:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13178499	13183940	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_T0001003;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=intron:HG00642_ch_T0001003:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13183941	13183964	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_T0001003;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=exon:HG00642_ch_T0001003:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13183965	13206537	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_T0001003;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=intron:HG00642_ch_T0001003:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13206538	13206945	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00642_ch_T0001003;gene_id=HG00642_ch_G0000329;Parent=HG00642_ch_T0001003;transcript_name=HG00642_ch_T0001003;gene_name=ENSG00000296286;ID=exon:HG00642_ch_T0001003:2;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13237079	13560266	.	+	.	source_gene_common_name=USP9Y;source_gene=ENSG00000114374.13;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;gene_id=HG00642_ch_G0000330;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff;ID=HG00642_ch_G0000330;Name=USP9Y
HG00642_chrY	CAT	transcript	13237079	13408298	1000	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=HG00642_ch_T0001004;Name=USP9Y
HG00642_chrY	CAT	exon	13237079	13237436	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13237437	13244212	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13244213	13244367	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13244368	13245539	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13245540	13245679	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13245680	13361784	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13361785	13362135	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362136	13364068	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13364069	13364115	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13364116	13385941	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13385942	13386035	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13386036	13389754	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13389755	13389870	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13389871	13401438	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13401439	13401484	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13401485	13407188	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=intron:HG00642_ch_T0001004:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13407189	13408298	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00642_ch_T0001004;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001004;transcript_name=HG00642_ch_T0001004;gene_name=USP9Y;ID=exon:HG00642_ch_T0001004:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13361763	13391662	1000	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=HG00642_ch_T0001012;Name=USP9Y
HG00642_chrY	CAT	exon	13361763	13362135	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=exon:HG00642_ch_T0001012:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362136	13364068	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=intron:HG00642_ch_T0001012:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13364069	13364115	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=exon:HG00642_ch_T0001012:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13364116	13385941	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=intron:HG00642_ch_T0001012:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13385942	13386035	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=exon:HG00642_ch_T0001012:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13386036	13386892	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=intron:HG00642_ch_T0001012:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13386893	13391662	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00642_ch_T0001012;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001012;transcript_name=HG00642_ch_T0001012;gene_name=USP9Y;ID=exon:HG00642_ch_T0001012:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13361797	13560229	100	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=HG00642_ch_T0001013;Name=USP9Y
HG00642_chrY	CAT	exon	13361797	13362135	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362136	13364068	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13364069	13364115	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13364116	13385941	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13385942	13386035	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13386036	13401438	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13401439	13401484	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13401485	13408816	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13408817	13408972	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13408877	13408972	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13408877	13408879	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=start_codon:HG00642_ch_T0001013;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13408973	13420017	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13420018	13420166	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13420018	13420166	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13420167	13421536	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13421537	13421616	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13421537	13421616	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13421617	13424541	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13424542	13424654	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13424542	13424654	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13424655	13426003	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13426004	13426222	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13426004	13426222	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13426223	13435040	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435041	13435156	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435041	13435156	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435157	13435426	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435427	13435678	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435427	13435678	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435679	13435839	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435840	13435978	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435840	13435978	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435979	13437585	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13437586	13437738	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13437586	13437738	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13437739	13438953	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13438954	13439058	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13438954	13439058	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13439059	13456620	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13456621	13456827	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13456621	13456827	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13456828	13457934	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13457935	13458071	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13457935	13458071	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13458072	13459912	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13459913	13460046	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13459913	13460046	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13460047	13470498	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13470499	13470586	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13470499	13470586	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13470587	13473013	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13473014	13473356	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13473014	13473356	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13473357	13474901	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13474902	13474997	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13474902	13474997	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13474998	13476079	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13476080	13476291	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13476080	13476291	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13476292	13477449	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13477450	13477690	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13477450	13477690	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13477691	13478036	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478037	13478186	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13478037	13478186	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13478187	13478956	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478957	13479077	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13478957	13479077	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13479078	13485633	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485634	13485764	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13485634	13485764	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13485765	13485952	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485953	13486231	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13485953	13486231	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13486232	13489837	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13489838	13489963	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13489838	13489963	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13489964	13490929	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13490930	13491055	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13490930	13491055	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13491056	13492462	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13492463	13492632	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13492463	13492632	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13492633	13509610	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13509611	13509719	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13509611	13509719	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13509720	13510103	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13510104	13510250	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13510104	13510250	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13510251	13511066	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13511067	13511213	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13511067	13511213	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13511214	13512261	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13512262	13512484	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13512262	13512484	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13512485	13515555	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13515556	13515776	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13515556	13515776	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13515777	13517851	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13517852	13518042	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13517852	13518042	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13518043	13533114	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13533115	13533288	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13533115	13533288	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13533289	13537337	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13537338	13537479	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13537338	13537479	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13537480	13539290	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13539291	13540041	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13539291	13540041	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540042	13540436	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13540437	13540560	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13540437	13540560	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540561	13541666	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13541667	13541892	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13541667	13541892	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13541893	13542490	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13542491	13542620	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13542491	13542620	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13542621	13545759	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13545760	13545945	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13545760	13545945	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13545946	13546359	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546360	13546580	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13546360	13546580	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546581	13546665	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546666	13546754	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13546666	13546754	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546755	13555766	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13555767	13555923	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:44;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13555767	13555923	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13555924	13556059	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:44;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556060	13556272	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:45;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556060	13556272	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13556273	13556992	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:45;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556993	13557088	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:46;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556993	13557088	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13557089	13558705	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=intron:HG00642_ch_T0001013:46;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13558706	13560229	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=exon:HG00642_ch_T0001013:47;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13558706	13558843	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001013:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13558841	13558843	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00642_ch_T0001013;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001013;transcript_name=HG00642_ch_T0001013;gene_name=USP9Y;ID=stop_codon:HG00642_ch_T0001013;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13361966	13387684	1000	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=HG00642_ch_T0001014;Name=USP9Y
HG00642_chrY	CAT	exon	13361966	13362135	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=exon:HG00642_ch_T0001014:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362136	13364068	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=intron:HG00642_ch_T0001014:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13364069	13364115	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=exon:HG00642_ch_T0001014:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13364116	13385941	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=intron:HG00642_ch_T0001014:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13385942	13386035	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=exon:HG00642_ch_T0001014:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13386036	13387113	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=intron:HG00642_ch_T0001014:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13387114	13387684	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00642_ch_T0001014;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001014;transcript_name=HG00642_ch_T0001014;gene_name=USP9Y;ID=exon:HG00642_ch_T0001014:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13400660	13560266	100	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=HG00642_ch_T0001015;Name=USP9Y
HG00642_chrY	CAT	exon	13400660	13401484	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13401485	13408062	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13408063	13408122	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13408123	13408816	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13408817	13408972	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13408877	13408972	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13408877	13408879	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=start_codon:HG00642_ch_T0001015;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13408973	13420017	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13420018	13420166	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13420018	13420166	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13420167	13421536	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13421537	13421616	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13421537	13421616	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13421617	13424541	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13424542	13424654	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13424542	13424654	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13424655	13426003	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13426004	13426222	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13426004	13426222	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13426223	13435040	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435041	13435156	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435041	13435156	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435157	13435426	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435427	13435678	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435427	13435678	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435679	13435839	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435840	13435978	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13435840	13435978	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435979	13437585	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13437586	13437738	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13437586	13437738	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13437739	13438953	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13438954	13439058	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13438954	13439058	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13439059	13456620	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13456621	13456827	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13456621	13456827	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13456828	13457934	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13457935	13458071	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13457935	13458071	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13458072	13459912	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13459913	13460046	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13459913	13460046	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13460047	13470498	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13470499	13470586	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13470499	13470586	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13470587	13473013	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13473014	13473356	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13473014	13473356	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13473357	13474901	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13474902	13474997	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13474902	13474997	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13474998	13476079	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13476080	13476291	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13476080	13476291	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13476292	13477449	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13477450	13477690	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13477450	13477690	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13477691	13478036	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478037	13478186	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13478037	13478186	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13478187	13478956	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478957	13479077	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13478957	13479077	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13479078	13485633	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485634	13485764	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13485634	13485764	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13485765	13485952	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485953	13486231	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13485953	13486231	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13486232	13489837	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13489838	13489963	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13489838	13489963	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13489964	13490929	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13490930	13491055	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13490930	13491055	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13491056	13492462	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13492463	13492632	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13492463	13492632	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13492633	13509610	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13509611	13509719	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13509611	13509719	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13509720	13510103	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13510104	13510250	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13510104	13510250	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13510251	13511066	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13511067	13511213	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13511067	13511213	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13511214	13512261	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13512262	13512484	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13512262	13512484	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13512485	13515555	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13515556	13515776	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13515556	13515776	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13515777	13517851	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13517852	13518042	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13517852	13518042	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13518043	13533114	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13533115	13533288	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13533115	13533288	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13533289	13537337	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13537338	13537479	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13537338	13537479	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13537480	13539290	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13539291	13540041	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13539291	13540041	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540042	13540436	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13540437	13540560	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13540437	13540560	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540561	13541666	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13541667	13541892	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13541667	13541892	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13541893	13542490	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13542491	13542620	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13542491	13542620	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13542621	13545759	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13545760	13545945	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13545760	13545945	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13545946	13546359	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546360	13546580	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13546360	13546580	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546581	13546665	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546666	13546754	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13546666	13546754	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546755	13555766	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13555767	13555923	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13555767	13555923	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13555924	13556059	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556060	13556272	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556060	13556272	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13556273	13556992	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556993	13557088	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:44;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556993	13557088	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13557089	13558705	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=intron:HG00642_ch_T0001015:44;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13558706	13560266	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=exon:HG00642_ch_T0001015:45;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13558706	13558843	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001015:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13558841	13558843	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00642_ch_T0001015;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001015;transcript_name=HG00642_ch_T0001015;gene_name=USP9Y;ID=stop_codon:HG00642_ch_T0001015;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13401469	13420632	1000	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=HG00642_ch_T0001016;Name=USP9Y
HG00642_chrY	CAT	exon	13401469	13401484	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001016;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=exon:HG00642_ch_T0001016:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13401485	13408816	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001016;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=intron:HG00642_ch_T0001016:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13408817	13408972	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001016;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=exon:HG00642_ch_T0001016:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13408973	13420017	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001016;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=intron:HG00642_ch_T0001016:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13420018	13420632	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00642_ch_T0001016;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001016;transcript_name=HG00642_ch_T0001016;gene_name=USP9Y;ID=exon:HG00642_ch_T0001016:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13408865	13560266	1000	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=HG00642_ch_T0001017;Name=USP9Y
HG00642_chrY	CAT	exon	13408865	13408972	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13408973	13420017	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13420018	13420166	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13420167	13421536	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13421537	13421616	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13421617	13424541	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13424542	13424654	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13424655	13426003	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13426004	13426222	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13426223	13435040	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435041	13435156	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435157	13435426	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:5;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435427	13435678	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435679	13435839	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:6;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13435840	13435978	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13435979	13437585	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:7;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13437586	13437738	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13437739	13438953	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:8;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13438954	13439058	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13439059	13456620	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:9;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13456621	13456827	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13456828	13457934	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:10;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13457935	13458071	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13458072	13459912	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:11;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13459913	13460046	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13460047	13470498	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:12;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13470499	13470586	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13470587	13473013	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:13;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13473014	13473356	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13473357	13474901	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:14;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13474902	13474997	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13474998	13476079	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:15;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13476080	13476291	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13476292	13477449	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:16;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13477450	13477690	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13477691	13478036	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:17;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478037	13478186	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13478187	13478956	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:18;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13478957	13479077	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13479078	13485633	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:19;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485634	13485764	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13485765	13485952	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:20;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13485953	13486231	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13486232	13489837	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:21;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13489838	13489963	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13489964	13490929	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:22;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13490930	13491055	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13491056	13492462	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:23;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13492463	13492632	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13492633	13509610	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:24;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13509611	13509719	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13509720	13510103	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:25;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13510104	13510250	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13510251	13511066	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:26;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13511067	13511213	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13511214	13512261	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:27;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13512262	13512484	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13512485	13515555	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:28;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13515556	13515776	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13515777	13517851	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:29;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13517852	13518042	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13518043	13533114	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:30;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13533115	13533288	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13533289	13537337	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:31;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13537338	13537479	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13537480	13539290	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:32;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13539291	13540041	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540042	13540436	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:33;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13540437	13540560	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13540561	13541651	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:34;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13541652	13541892	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13541893	13542490	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:35;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13542491	13542620	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13542621	13545759	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:36;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13545760	13545945	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13545946	13546359	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:37;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546360	13546580	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546581	13546665	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:38;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13546666	13546754	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546755	13555766	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:39;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13555767	13555923	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13555924	13556059	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:40;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556060	13556272	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13556273	13556992	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:41;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556993	13557088	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13557089	13558705	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=intron:HG00642_ch_T0001017:42;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13558706	13560266	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00642_ch_T0001017;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001017;transcript_name=HG00642_ch_T0001017;gene_name=USP9Y;ID=exon:HG00642_ch_T0001017:43;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13546472	13559039	100	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=HG00642_ch_T0001019;Name=USP9Y
HG00642_chrY	CAT	exon	13546472	13546580	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=exon:HG00642_ch_T0001019:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13546472	13546580	.	+	2	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001019:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13546581	13555766	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=intron:HG00642_ch_T0001019:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13555767	13555923	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=exon:HG00642_ch_T0001019:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13555767	13555923	.	+	1	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001019:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13555924	13556059	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=intron:HG00642_ch_T0001019:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556060	13556272	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=exon:HG00642_ch_T0001019:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556060	13556272	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001019:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13556273	13556992	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=intron:HG00642_ch_T0001019:2;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13556993	13557088	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=exon:HG00642_ch_T0001019:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13556993	13557088	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001019:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13557089	13558705	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=intron:HG00642_ch_T0001019:3;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13558706	13559039	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=exon:HG00642_ch_T0001019:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13558706	13558843	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=CDS:HG00642_ch_T0001019:4;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13558841	13558843	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00642_ch_T0001019;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001019;transcript_name=HG00642_ch_T0001019;gene_name=USP9Y;ID=stop_codon:HG00642_ch_T0001019;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13556240	13560266	1000	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00642_ch_T0001020;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_G0000330;transcript_name=HG00642_ch_T0001020;gene_name=USP9Y;ID=HG00642_ch_T0001020;Name=USP9Y
HG00642_chrY	CAT	exon	13556240	13557088	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00642_ch_T0001020;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001020;transcript_name=HG00642_ch_T0001020;gene_name=USP9Y;ID=exon:HG00642_ch_T0001020:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13557089	13558705	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00642_ch_T0001020;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001020;transcript_name=HG00642_ch_T0001020;gene_name=USP9Y;ID=intron:HG00642_ch_T0001020:0;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13558706	13560266	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00642_ch_T0001020;gene_id=HG00642_ch_G0000330;Parent=HG00642_ch_T0001020;transcript_name=HG00642_ch_T0001020;gene_name=USP9Y;ID=exon:HG00642_ch_T0001020:1;Name=USP9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13237202	13244312	.	+	.	source_gene_common_name=SHROOM2P1;source_gene=ENSG00000226863.1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;gene_id=HG00642_ch_G0000331;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SHROOM2P1;gene_sources=liftoff;ID=HG00642_ch_G0000331;Name=SHROOM2P1
HG00642_chrY	CAT	transcript	13237202	13244312	1000	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_G0000331;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=HG00642_ch_T0001005;Name=SHROOM2P1
HG00642_chrY	CAT	exon	13237202	13237330	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_T0001005;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=exon:HG00642_ch_T0001005:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13237331	13240488	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_T0001005;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=intron:HG00642_ch_T0001005:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13240489	13242643	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_T0001005;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=exon:HG00642_ch_T0001005:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13242644	13244212	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_T0001005;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=intron:HG00642_ch_T0001005:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13244213	13244312	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00642_ch_T0001005;gene_id=HG00642_ch_G0000331;Parent=HG00642_ch_T0001005;transcript_name=HG00642_ch_T0001005;gene_name=SHROOM2P1;ID=exon:HG00642_ch_T0001005:2;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13318412	13333830	.	-	.	source_gene_common_name=MED14P1;source_gene=ENSG00000233774.1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;gene_id=HG00642_ch_G0000332;gene_biotype=unprocessed_pseudogene;gene_name=MED14P1;gene_sources=liftoff;ID=HG00642_ch_G0000332;Name=MED14P1
HG00642_chrY	CAT	transcript	13318412	13333830	1000	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_G0000332;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=HG00642_ch_T0001006;Name=MED14P1
HG00642_chrY	CAT	exon	13318412	13318552	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=exon:HG00642_ch_T0001006:0;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13318553	13319054	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=intron:HG00642_ch_T0001006:0;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13319055	13319162	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=exon:HG00642_ch_T0001006:1;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13319163	13319458	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=intron:HG00642_ch_T0001006:1;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13319459	13319594	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=exon:HG00642_ch_T0001006:2;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13319595	13332157	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=intron:HG00642_ch_T0001006:2;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13332158	13332302	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=exon:HG00642_ch_T0001006:3;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13332303	13333712	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=intron:HG00642_ch_T0001006:3;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13333713	13333830	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00642_ch_T0001006;gene_id=HG00642_ch_G0000332;Parent=HG00642_ch_T0001006;transcript_name=HG00642_ch_T0001006;gene_name=MED14P1;ID=exon:HG00642_ch_T0001006:4;Name=MED14P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13360739	13362969	.	-	.	source_gene_common_name=ENSG00000286009;source_gene=ENSG00000286009.3;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;gene_id=HG00642_ch_G0000333;gene_biotype=lncRNA;gene_name=ENSG00000286009;gene_sources=liftoff;ID=HG00642_ch_G0000333;Name=ENSG00000286009
HG00642_chrY	CAT	transcript	13360739	13362964	1000	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_G0000333;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=HG00642_ch_T0001007;Name=ENSG00000286009
HG00642_chrY	CAT	exon	13360739	13361551	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001007;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001007:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13361552	13361954	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001007;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001007:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13361955	13362180	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001007;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001007:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362181	13362789	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001007;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001007:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362790	13362964	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00642_ch_T0001007;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001007;transcript_name=HG00642_ch_T0001007;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001007:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13360742	13362935	1000	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_G0000333;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=HG00642_ch_T0001008;Name=ENSG00000286009
HG00642_chrY	CAT	exon	13360742	13361554	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001008;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001008:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13361555	13361954	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001008;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001008:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13361955	13362180	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001008;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001008:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362181	13362732	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001008;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001008:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362733	13362935	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00642_ch_T0001008;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001008;transcript_name=HG00642_ch_T0001008;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001008:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13360745	13362903	1000	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_G0000333;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=HG00642_ch_T0001009;Name=ENSG00000286009
HG00642_chrY	CAT	exon	13360745	13361554	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001009;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001009:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13361555	13362085	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001009;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001009:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362086	13362180	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001009;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001009:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362181	13362732	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001009;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001009:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362733	13362903	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00642_ch_T0001009;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001009;transcript_name=HG00642_ch_T0001009;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001009:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13360745	13362907	1000	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_G0000333;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=HG00642_ch_T0001010;Name=ENSG00000286009
HG00642_chrY	CAT	exon	13360745	13361554	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001010;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001010:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13361555	13362085	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001010;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001010:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362086	13362180	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001010;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001010:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362181	13362789	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001010;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001010:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362790	13362907	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00642_ch_T0001010;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001010;transcript_name=HG00642_ch_T0001010;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001010:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13360745	13362969	1000	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_G0000333;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=HG00642_ch_T0001011;Name=ENSG00000286009
HG00642_chrY	CAT	exon	13360745	13361554	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001011;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001011:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13361555	13361954	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001011;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001011:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13361955	13362180	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001011;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001011:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13362181	13362789	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001011;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=intron:HG00642_ch_T0001011:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13362790	13362969	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00642_ch_T0001011;gene_id=HG00642_ch_G0000333;Parent=HG00642_ch_T0001011;transcript_name=HG00642_ch_T0001011;gene_name=ENSG00000286009;ID=exon:HG00642_ch_T0001011:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13501404	13503261	.	-	.	source_gene_common_name=CDY4P;source_gene=ENSG00000228411.1;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;gene_id=HG00642_ch_G0000334;gene_biotype=processed_pseudogene;gene_name=CDY4P;gene_sources=liftoff;ID=HG00642_ch_G0000334;Name=CDY4P
HG00642_chrY	CAT	transcript	13501404	13503261	1000	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00642_ch_T0001018;gene_id=HG00642_ch_G0000334;Parent=HG00642_ch_G0000334;transcript_name=HG00642_ch_T0001018;gene_name=CDY4P;ID=HG00642_ch_T0001018;Name=CDY4P
HG00642_chrY	CAT	exon	13501404	13502147	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00642_ch_T0001018;gene_id=HG00642_ch_G0000334;Parent=HG00642_ch_T0001018;transcript_name=HG00642_ch_T0001018;gene_name=CDY4P;ID=exon:HG00642_ch_T0001018:0;Name=CDY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13502148	13502492	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00642_ch_T0001018;gene_id=HG00642_ch_G0000334;Parent=HG00642_ch_T0001018;transcript_name=HG00642_ch_T0001018;gene_name=CDY4P;ID=intron:HG00642_ch_T0001018:0;Name=CDY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13502493	13503261	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00642_ch_T0001018;gene_id=HG00642_ch_G0000334;Parent=HG00642_ch_T0001018;transcript_name=HG00642_ch_T0001018;gene_name=CDY4P;ID=exon:HG00642_ch_T0001018:1;Name=CDY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13603533	13619903	.	+	.	source_gene_common_name=DDX3Y;source_gene=ENSG00000067048.17;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;gene_id=HG00642_ch_G0000335;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff;ID=HG00642_ch_G0000335;Name=DDX3Y
HG00642_chrY	CAT	transcript	13603533	13617964	100	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=HG00642_ch_T0001021;Name=DDX3Y
HG00642_chrY	CAT	exon	13603533	13603839	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13603840	13604359	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13604360	13604406	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13604362	13604406	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13604362	13604364	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=start_codon:HG00642_ch_T0001021;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13604407	13606961	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13606962	13607019	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13606962	13607019	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13607020	13608784	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13608785	13608832	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13608785	13608832	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13608833	13611263	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13611264	13611393	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13611264	13611393	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13611394	13612151	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612152	13612307	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612152	13612307	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612308	13612387	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612388	13612487	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612388	13612487	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613143	13613278	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13613279	13613988	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613989	13614074	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613989	13614074	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614075	13614308	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13614309	13614407	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13614309	13614407	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614408	13614491	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13614492	13614652	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13614492	13614652	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614653	13615054	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615055	13615199	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615055	13615199	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615200	13615307	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615308	13615452	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615308	13615452	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615453	13615685	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615686	13615867	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615686	13615867	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615868	13615941	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615942	13616059	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615942	13616059	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616060	13616331	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13616332	13616485	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13616332	13616485	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616486	13616827	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13616828	13616967	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13616828	13616967	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616968	13617467	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001021:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13617468	13617964	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001021:17;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13617468	13617547	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001021:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13617545	13617547	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00642_ch_T0001021;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001021;transcript_name=HG00642_ch_T0001021;gene_name=DDX3Y;ID=stop_codon:HG00642_ch_T0001021;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13603543	13613278	100	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=HG00642_ch_T0001022;Name=DDX3Y
HG00642_chrY	CAT	exon	13603543	13603839	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13603840	13604282	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13604283	13604406	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13604362	13604406	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13604362	13604364	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=start_codon:HG00642_ch_T0001022;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13604407	13606961	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13606962	13607019	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13606962	13607019	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13607020	13608784	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13608785	13608832	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13608785	13608832	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13608833	13611263	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13611264	13611393	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13611264	13611393	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13611394	13612151	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612152	13612307	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612152	13612307	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612308	13612387	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612388	13612487	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612388	13612487	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001022:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001022:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613143	13613278	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00642_ch_T0001022;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001022;transcript_name=HG00642_ch_T0001022;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001022:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13604274	13609121	1000	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=HG00642_ch_T0001023;Name=DDX3Y
HG00642_chrY	CAT	exon	13604274	13604406	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001023;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001023:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13604407	13606961	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001023;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001023:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13606962	13607019	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001023;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001023:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13607020	13608784	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001023;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001023:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13608785	13609121	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00642_ch_T0001023;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001023;transcript_name=HG00642_ch_T0001023;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001023:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13604293	13619903	100	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=HG00642_ch_T0001024;Name=DDX3Y
HG00642_chrY	CAT	exon	13604293	13604406	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13604362	13604406	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13604362	13604364	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=start_codon:HG00642_ch_T0001024;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13604407	13606961	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13606962	13607019	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13606962	13607019	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13607020	13608784	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13608785	13608832	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13608785	13608832	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13608833	13611263	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13611264	13611393	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13611264	13611393	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13611394	13612151	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612152	13612307	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612152	13612307	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612308	13612387	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612388	13612487	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612388	13612487	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613143	13613278	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13613279	13613988	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613989	13614074	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613989	13614074	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614075	13614308	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13614309	13614407	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13614309	13614407	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614408	13614491	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13614492	13614652	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13614492	13614652	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614653	13615054	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615055	13615199	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615055	13615199	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615200	13615307	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615308	13615452	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615308	13615452	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615453	13615685	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615686	13615867	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615686	13615867	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615868	13615941	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615942	13616059	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13615942	13616059	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616060	13616331	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13616332	13616485	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13616332	13616485	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616486	13616827	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13616828	13616967	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13616828	13616967	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13616968	13617467	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001024:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13617468	13619903	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001024:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13617468	13617547	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001024:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13617545	13617547	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00642_ch_T0001024;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001024;transcript_name=HG00642_ch_T0001024;gene_name=DDX3Y;ID=stop_codon:HG00642_ch_T0001024;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13605163	13614074	100	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=HG00642_ch_T0001025;Name=DDX3Y
HG00642_chrY	CAT	exon	13605163	13605240	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13605205	13605240	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	13605205	13605207	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=start_codon:HG00642_ch_T0001025;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13605241	13606961	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13606962	13607019	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13606962	13607019	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13607020	13608784	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13608785	13608832	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13608785	13608832	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13608833	13611263	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13611264	13611393	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13611264	13611393	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13611394	13612151	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612152	13612307	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612152	13612307	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612308	13612387	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13612388	13612487	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13612388	13612487	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613143	13613278	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13613279	13613988	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001025:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613989	13614074	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001025:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13613989	13614074	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00642_ch_T0001025;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001025;transcript_name=HG00642_ch_T0001025;gene_name=DDX3Y;ID=CDS:HG00642_ch_T0001025:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13612065	13613226	1000	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00642_ch_T0001026;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001026;gene_name=DDX3Y;ID=HG00642_ch_T0001026;Name=DDX3Y
HG00642_chrY	CAT	exon	13612065	13612487	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00642_ch_T0001026;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001026;transcript_name=HG00642_ch_T0001026;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001026:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00642_ch_T0001026;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001026;transcript_name=HG00642_ch_T0001026;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001026:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613226	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00642_ch_T0001026;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001026;transcript_name=HG00642_ch_T0001026;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001026:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13612388	13614324	1000	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=HG00642_ch_T0001027;Name=DDX3Y
HG00642_chrY	CAT	exon	13612388	13612487	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001027;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001027:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001027;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001027:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001027;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001027:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13613279	13613988	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001027;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001027:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613989	13614324	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00642_ch_T0001027;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001027;transcript_name=HG00642_ch_T0001027;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001027:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13612433	13614652	1000	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=HG00642_ch_T0001028;Name=DDX3Y
HG00642_chrY	CAT	exon	13612433	13612487	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001028:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13612488	13613142	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001028:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613143	13613278	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001028:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13613279	13613988	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001028:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13613989	13614074	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001028:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13614075	13614308	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001028:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13614309	13614652	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00642_ch_T0001028;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001028;transcript_name=HG00642_ch_T0001028;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001028:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13614921	13615778	1000	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_G0000335;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=HG00642_ch_T0001029;Name=DDX3Y
HG00642_chrY	CAT	exon	13614921	13615199	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001029;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001029:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615200	13615307	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001029;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001029:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615308	13615452	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001029;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001029:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13615453	13615685	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001029;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=intron:HG00642_ch_T0001029:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13615686	13615778	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00642_ch_T0001029;gene_id=HG00642_ch_G0000335;Parent=HG00642_ch_T0001029;transcript_name=HG00642_ch_T0001029;gene_name=DDX3Y;ID=exon:HG00642_ch_T0001029:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13629590	13647607	.	-	.	source_gene_common_name=CASKP1;source_gene=ENSG00000234059.1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;gene_id=HG00642_ch_G0000336;gene_biotype=unprocessed_pseudogene;gene_name=CASKP1;gene_sources=liftoff;ID=HG00642_ch_G0000336;Name=CASKP1
HG00642_chrY	CAT	transcript	13629590	13647607	1000	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_G0000336;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=HG00642_ch_T0001030;Name=CASKP1
HG00642_chrY	CAT	exon	13629590	13629752	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:0;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13629753	13634626	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:0;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13634627	13634711	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:1;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13634712	13645044	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:1;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13645045	13645088	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:2;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13645089	13645313	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:2;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13645314	13645348	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:3;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13645349	13645449	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:3;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13645450	13645497	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:4;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13645498	13645712	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:4;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13645713	13645732	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:5;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13645733	13647099	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:5;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13647100	13647203	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:6;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13647204	13647524	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=intron:HG00642_ch_T0001030:6;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13647525	13647607	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00642_ch_T0001030;gene_id=HG00642_ch_G0000336;Parent=HG00642_ch_T0001030;transcript_name=HG00642_ch_T0001030;gene_name=CASKP1;ID=exon:HG00642_ch_T0001030:7;Name=CASKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13783215	13795233	.	+	.	source_gene_common_name=SFPQP1;source_gene=ENSG00000224035.1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;gene_id=HG00642_ch_G0000337;gene_biotype=processed_pseudogene;gene_name=SFPQP1;gene_sources=liftoff;ID=HG00642_ch_G0000337;Name=SFPQP1
HG00642_chrY	CAT	transcript	13783215	13795233	1000	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00642_ch_T0001031;gene_id=HG00642_ch_G0000337;Parent=HG00642_ch_G0000337;transcript_name=HG00642_ch_T0001031;gene_name=SFPQP1;ID=HG00642_ch_T0001031;Name=SFPQP1
HG00642_chrY	CAT	exon	13783215	13783769	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00642_ch_T0001031;gene_id=HG00642_ch_G0000337;Parent=HG00642_ch_T0001031;transcript_name=HG00642_ch_T0001031;gene_name=SFPQP1;ID=exon:HG00642_ch_T0001031:0;Name=SFPQP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13783770	13794002	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00642_ch_T0001031;gene_id=HG00642_ch_G0000337;Parent=HG00642_ch_T0001031;transcript_name=HG00642_ch_T0001031;gene_name=SFPQP1;ID=intron:HG00642_ch_T0001031:0;Name=SFPQP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13794003	13795233	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00642_ch_T0001031;gene_id=HG00642_ch_G0000337;Parent=HG00642_ch_T0001031;transcript_name=HG00642_ch_T0001031;gene_name=SFPQP1;ID=exon:HG00642_ch_T0001031:1;Name=SFPQP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13853348	13861631	.	-	.	source_gene_common_name=TAB3P1;source_gene=ENSG00000235462.2;gene_id=HG00642_ch_G0000338;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TAB3P1;gene_sources=liftoff;ID=HG00642_ch_G0000338;Name=TAB3P1
HG00642_chrY	CAT	transcript	13853348	13861631	1000	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_G0000338;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=HG00642_ch_T0001032;Name=TAB3P1
HG00642_chrY	CAT	exon	13853348	13853441	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_T0001032;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=exon:HG00642_ch_T0001032:0;Name=TAB3P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13853442	13859372	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_T0001032;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=intron:HG00642_ch_T0001032:0;Name=TAB3P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13859373	13859533	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_T0001032;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=exon:HG00642_ch_T0001032:1;Name=TAB3P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13859534	13860252	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_T0001032;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=intron:HG00642_ch_T0001032:1;Name=TAB3P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13860253	13861631	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00642_ch_T0001032;gene_id=HG00642_ch_G0000338;Parent=HG00642_ch_T0001032;transcript_name=HG00642_ch_T0001032;gene_name=TAB3P1;ID=exon:HG00642_ch_T0001032:2;Name=TAB3P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13858690	13860966	.	-	.	source_gene_common_name=ENSG00000290852;source_gene=ENSG00000290852.1;gene_id=HG00642_ch_G0000339;gene_biotype=lncRNA;gene_name=ENSG00000290852;gene_sources=liftoff;ID=HG00642_ch_G0000339;Name=ENSG00000290852
HG00642_chrY	CAT	transcript	13858690	13860966	1000	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00642_ch_T0001033;gene_id=HG00642_ch_G0000339;Parent=HG00642_ch_G0000339;transcript_name=HG00642_ch_T0001033;gene_name=ENSG00000290852;ID=HG00642_ch_T0001033;Name=ENSG00000290852
HG00642_chrY	CAT	exon	13858690	13858886	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00642_ch_T0001033;gene_id=HG00642_ch_G0000339;Parent=HG00642_ch_T0001033;transcript_name=HG00642_ch_T0001033;gene_name=ENSG00000290852;ID=exon:HG00642_ch_T0001033:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13858887	13860310	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00642_ch_T0001033;gene_id=HG00642_ch_G0000339;Parent=HG00642_ch_T0001033;transcript_name=HG00642_ch_T0001033;gene_name=ENSG00000290852;ID=intron:HG00642_ch_T0001033:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13860311	13860966	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00642_ch_T0001033;gene_id=HG00642_ch_G0000339;Parent=HG00642_ch_T0001033;transcript_name=HG00642_ch_T0001033;gene_name=ENSG00000290852;ID=exon:HG00642_ch_T0001033:1;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13930304	13930859	.	+	.	source_gene_common_name=DPPA2P1;source_gene=ENSG00000223915.1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;gene_id=HG00642_ch_G0000340;gene_biotype=processed_pseudogene;gene_name=DPPA2P1;gene_sources=liftoff;ID=HG00642_ch_G0000340;Name=DPPA2P1
HG00642_chrY	CAT	transcript	13930304	13930859	1000	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG00642_ch_T0001034;gene_id=HG00642_ch_G0000340;Parent=HG00642_ch_G0000340;transcript_name=HG00642_ch_T0001034;gene_name=DPPA2P1;ID=HG00642_ch_T0001034;Name=DPPA2P1
HG00642_chrY	CAT	exon	13930304	13930859	.	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG00642_ch_T0001034;gene_id=HG00642_ch_G0000340;Parent=HG00642_ch_T0001034;transcript_name=HG00642_ch_T0001034;gene_name=DPPA2P1;ID=exon:HG00642_ch_T0001034:0;Name=DPPA2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13933997	14180080	.	-	.	source_gene_common_name=UTY;source_gene=ENSG00000183878.16;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;gene_id=HG00642_ch_G0000341;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000341;Name=UTY
HG00642_chrY	CAT	transcript	13933997	14179376	1000	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=HG00642_ch_T0001035;Name=UTY
HG00642_chrY	CAT	exon	13933997	13934246	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13933997	13934246	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13950436	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=intron:HG00642_ch_T0001035:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179376	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=exon:HG00642_ch_T0001035:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=CDS:HG00642_ch_T0001035:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00642_ch_T0001035;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001035;transcript_name=HG00642_ch_T0001035;gene_name=UTY;ID=start_codon:HG00642_ch_T0001035;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13934000	14059208	1000	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=HG00642_ch_T0001036;Name=UTY
HG00642_chrY	CAT	exon	13934000	13934246	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13934000	13934246	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13950436	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14057884	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057885	14058040	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057885	14058040	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058041	14058508	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=intron:HG00642_ch_T0001036:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059208	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=exon:HG00642_ch_T0001036:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059208	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00642_ch_T0001036;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001036;transcript_name=HG00642_ch_T0001036;gene_name=UTY;ID=CDS:HG00642_ch_T0001036:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13934001	13944786	1000	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00642_ch_T0001037;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001037;gene_name=UTY;ID=HG00642_ch_T0001037;Name=UTY
HG00642_chrY	CAT	exon	13934001	13934246	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00642_ch_T0001037;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001037;transcript_name=HG00642_ch_T0001037;gene_name=UTY;ID=exon:HG00642_ch_T0001037:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13944634	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00642_ch_T0001037;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001037;transcript_name=HG00642_ch_T0001037;gene_name=UTY;ID=intron:HG00642_ch_T0001037:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13944635	13944786	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00642_ch_T0001037;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001037;transcript_name=HG00642_ch_T0001037;gene_name=UTY;ID=exon:HG00642_ch_T0001037:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13934019	14179409	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=HG00642_ch_T0001038;Name=UTY
HG00642_chrY	CAT	exon	13934019	13934246	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13950436	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14033637	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14033638	14033760	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14033640	14033760	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14033640	14033642	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001038;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14033761	14034982	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=intron:HG00642_ch_T0001038:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179409	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=exon:HG00642_ch_T0001038:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=CDS:HG00642_ch_T0001038:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00642_ch_T0001038;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001038;transcript_name=HG00642_ch_T0001038;gene_name=UTY;ID=start_codon:HG00642_ch_T0001038;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13934019	14035549	1000	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=HG00642_ch_T0001039;Name=UTY
HG00642_chrY	CAT	exon	13934019	13934246	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13934019	13934246	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13959697	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=intron:HG00642_ch_T0001039:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035549	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=exon:HG00642_ch_T0001039:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035549	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00642_ch_T0001039;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001039;transcript_name=HG00642_ch_T0001039;gene_name=UTY;ID=CDS:HG00642_ch_T0001039:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13934019	14179409	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=HG00642_ch_T0001040;Name=UTY
HG00642_chrY	CAT	exon	13934019	13934246	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13934247	13950436	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14033637	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14033638	14033760	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14033640	14033760	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14033640	14033642	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001040;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14033761	14034982	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=intron:HG00642_ch_T0001040:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179409	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=exon:HG00642_ch_T0001040:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=CDS:HG00642_ch_T0001040:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00642_ch_T0001040;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001040;transcript_name=HG00642_ch_T0001040;gene_name=UTY;ID=start_codon:HG00642_ch_T0001040;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13947799	14180080	100	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=HG00642_ch_T0001041;Name=UTY
HG00642_chrY	CAT	exon	13947799	13949302	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001041;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=intron:HG00642_ch_T0001041:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14180080	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=exon:HG00642_ch_T0001041:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=CDS:HG00642_ch_T0001041:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00642_ch_T0001041;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001041;transcript_name=HG00642_ch_T0001041;gene_name=UTY;ID=start_codon:HG00642_ch_T0001041;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13947805	14179440	100	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=HG00642_ch_T0001042;Name=UTY
HG00642_chrY	CAT	exon	13947805	13949302	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001042;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14057884	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057885	14058040	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057885	14058040	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058041	14058508	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=intron:HG00642_ch_T0001042:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179440	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=exon:HG00642_ch_T0001042:29;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=CDS:HG00642_ch_T0001042:29;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00642_ch_T0001042;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001042;transcript_name=HG00642_ch_T0001042;gene_name=UTY;ID=start_codon:HG00642_ch_T0001042;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13948562	14179398	100	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=HG00642_ch_T0001043;Name=UTY
HG00642_chrY	CAT	exon	13948562	13949232	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949206	13949232	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949206	13949208	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001043;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949233	13950436	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14057884	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057885	14057974	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057885	14057974	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057975	14058508	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=intron:HG00642_ch_T0001043:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179398	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=exon:HG00642_ch_T0001043:29;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=CDS:HG00642_ch_T0001043:29;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00642_ch_T0001043;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001043;transcript_name=HG00642_ch_T0001043;gene_name=UTY;ID=start_codon:HG00642_ch_T0001043;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=HG00642_ch_T0001044;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001044;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13959697	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14058508	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=intron:HG00642_ch_T0001044:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=exon:HG00642_ch_T0001044:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=CDS:HG00642_ch_T0001044:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00642_ch_T0001044;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001044;transcript_name=HG00642_ch_T0001044;gene_name=UTY;ID=start_codon:HG00642_ch_T0001044;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=HG00642_ch_T0001045;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001045;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054205	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054206	14054253	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054206	14054253	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054254	14054422	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=intron:HG00642_ch_T0001045:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=exon:HG00642_ch_T0001045:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=CDS:HG00642_ch_T0001045:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00642_ch_T0001045;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001045;transcript_name=HG00642_ch_T0001045;gene_name=UTY;ID=start_codon:HG00642_ch_T0001045;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=HG00642_ch_T0001046;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001046;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14057884	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057885	14057974	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057885	14057974	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057975	14058508	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14065687	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=intron:HG00642_ch_T0001046:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=exon:HG00642_ch_T0001046:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=CDS:HG00642_ch_T0001046:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00642_ch_T0001046;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001046;transcript_name=HG00642_ch_T0001046;gene_name=UTY;ID=start_codon:HG00642_ch_T0001046;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=HG00642_ch_T0001047;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001047;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005605	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14058508	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=intron:HG00642_ch_T0001047:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=exon:HG00642_ch_T0001047:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=CDS:HG00642_ch_T0001047:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00642_ch_T0001047;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001047;transcript_name=HG00642_ch_T0001047;gene_name=UTY;ID=start_codon:HG00642_ch_T0001047;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=HG00642_ch_T0001048;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001048;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14057884	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057885	14058040	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057885	14058040	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058041	14059187	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=intron:HG00642_ch_T0001048:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=exon:HG00642_ch_T0001048:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=CDS:HG00642_ch_T0001048:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00642_ch_T0001048;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001048;transcript_name=HG00642_ch_T0001048;gene_name=UTY;ID=start_codon:HG00642_ch_T0001048;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=HG00642_ch_T0001049;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001049;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14110409	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14178660	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=intron:HG00642_ch_T0001049:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=exon:HG00642_ch_T0001049:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=CDS:HG00642_ch_T0001049:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00642_ch_T0001049;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001049;transcript_name=HG00642_ch_T0001049;gene_name=UTY;ID=start_codon:HG00642_ch_T0001049;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=HG00642_ch_T0001050;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001050;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13959697	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054794	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054795	14054818	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054795	14054818	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14058508	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=intron:HG00642_ch_T0001050:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=exon:HG00642_ch_T0001050:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=CDS:HG00642_ch_T0001050:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00642_ch_T0001050;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001050;transcript_name=HG00642_ch_T0001050;gene_name=UTY;ID=start_codon:HG00642_ch_T0001050;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13949276	14179072	100	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=HG00642_ch_T0001051;Name=UTY
HG00642_chrY	CAT	exon	13949276	13949302	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13949276	13949302	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13949276	13949278	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001051;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13949303	13950436	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13950437	13950607	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13950437	13950607	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13950608	13959697	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13959698	13959824	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13959698	13959824	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13959825	13997126	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13997127	13997268	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997127	13997268	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14058508	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14058509	14058643	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14058509	14058643	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14058644	14059187	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=intron:HG00642_ch_T0001051:27;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179072	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=exon:HG00642_ch_T0001051:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=CDS:HG00642_ch_T0001051:28;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00642_ch_T0001051;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001051;transcript_name=HG00642_ch_T0001051;gene_name=UTY;ID=start_codon:HG00642_ch_T0001051;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	13996861	14180077	100	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=HG00642_ch_T0001053;Name=UTY
HG00642_chrY	CAT	exon	13996861	13997268	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13997123	13997268	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	13997123	13997125	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001053;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13997269	13998376	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	13998377	13998564	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	13998377	13998564	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	13998565	14002296	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14002297	14002411	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14002297	14002411	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14002412	14004818	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14004819	14004967	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14004819	14004967	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14004968	14005457	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005458	14005532	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005458	14005532	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005533	14005605	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14005606	14005670	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14005606	14005670	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14005671	14022974	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:20;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:21;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:22;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=intron:HG00642_ch_T0001053:23;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14180077	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=exon:HG00642_ch_T0001053:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=CDS:HG00642_ch_T0001053:24;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00642_ch_T0001053;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001053;transcript_name=HG00642_ch_T0001053;gene_name=UTY;ID=start_codon:HG00642_ch_T0001053;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14022454	14180077	100	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=HG00642_ch_T0001054;Name=UTY
HG00642_chrY	CAT	exon	14022454	14022788	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022534	14022788	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14022534	14022536	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001054;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14022789	14022974	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14022975	14023180	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14022975	14023180	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14023181	14024020	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14024021	14024126	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14024021	14024126	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14024127	14025640	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14025641	14025770	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14025641	14025770	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14025771	14034982	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14034983	14035755	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14034983	14035755	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14035756	14054422	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14054423	14054818	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14054423	14054818	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14054819	14055342	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14055343	14055438	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14055343	14055438	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14055439	14057297	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14057298	14057390	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14057298	14057390	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14057391	14059187	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059188	14059407	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059188	14059407	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059408	14059850	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14059851	14059949	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14059851	14059949	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14065688	14065814	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068677	14068770	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14093275	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14093276	14093310	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14093276	14093310	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:17;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=intron:HG00642_ch_T0001054:18;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14180077	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=exon:HG00642_ch_T0001054:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=CDS:HG00642_ch_T0001054:19;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00642_ch_T0001054;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001054;transcript_name=HG00642_ch_T0001054;gene_name=UTY;ID=start_codon:HG00642_ch_T0001054;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14059909	14178947	1000	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=HG00642_ch_T0001055;Name=UTY
HG00642_chrY	CAT	exon	14059909	14059949	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14059950	14065687	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14065688	14065814	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14065815	14068676	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14068677	14068770	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14068739	14068770	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14068739	14068741	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001055;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14068771	14096334	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096335	14096389	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=intron:HG00642_ch_T0001055:8;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14178947	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=exon:HG00642_ch_T0001055:9;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14178947	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00642_ch_T0001055;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001055;transcript_name=HG00642_ch_T0001055;gene_name=UTY;ID=CDS:HG00642_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14092569	14178911	1000	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=HG00642_ch_T0001056;Name=UTY
HG00642_chrY	CAT	exon	14092569	14093310	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14093311	14096334	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14096335	14096389	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=intron:HG00642_ch_T0001056:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178911	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00642_ch_T0001056;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001056;transcript_name=HG00642_ch_T0001056;gene_name=UTY;ID=exon:HG00642_ch_T0001056:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14095719	14179385	100	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=HG00642_ch_T0001057;Name=UTY
HG00642_chrY	CAT	exon	14095719	14096389	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14096321	14096389	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14096321	14096323	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=stop_codon:HG00642_ch_T0001057;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14096390	14110409	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14110410	14110530	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14110410	14110530	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14110531	14114151	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14114152	14114210	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14114152	14114210	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14114211	14148423	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14148424	14148473	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14148424	14148473	.	-	2	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14148474	14169527	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14169528	14169636	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14169528	14169636	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14169637	14178660	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178661	14178724	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178661	14178724	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=intron:HG00642_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179385	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=exon:HG00642_ch_T0001057:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14178921	14179072	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=CDS:HG00642_ch_T0001057:6;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14179070	14179072	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00642_ch_T0001057;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001057;transcript_name=HG00642_ch_T0001057;gene_name=UTY;ID=start_codon:HG00642_ch_T0001057;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14178449	14179330	1000	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00642_ch_T0001058;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_G0000341;transcript_name=HG00642_ch_T0001058;gene_name=UTY;ID=HG00642_ch_T0001058;Name=UTY
HG00642_chrY	CAT	exon	14178449	14178724	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00642_ch_T0001058;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001058;transcript_name=HG00642_ch_T0001058;gene_name=UTY;ID=exon:HG00642_ch_T0001058:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14178725	14178920	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00642_ch_T0001058;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001058;transcript_name=HG00642_ch_T0001058;gene_name=UTY;ID=intron:HG00642_ch_T0001058:0;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14178921	14179330	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00642_ch_T0001058;gene_id=HG00642_ch_G0000341;Parent=HG00642_ch_T0001058;transcript_name=HG00642_ch_T0001058;gene_name=UTY;ID=exon:HG00642_ch_T0001058:1;Name=UTY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	13986058	13986798	.	+	.	source_gene_common_name=PSMA6P1;source_gene=ENSG00000215414.4;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;gene_id=HG00642_ch_G0000342;gene_biotype=processed_pseudogene;gene_name=PSMA6P1;gene_sources=liftoff;ID=HG00642_ch_G0000342;Name=PSMA6P1
HG00642_chrY	CAT	transcript	13986058	13986798	1000	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG00642_ch_T0001052;gene_id=HG00642_ch_G0000342;Parent=HG00642_ch_G0000342;transcript_name=HG00642_ch_T0001052;gene_name=PSMA6P1;ID=HG00642_ch_T0001052;Name=PSMA6P1
HG00642_chrY	CAT	exon	13986058	13986798	.	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG00642_ch_T0001052;gene_id=HG00642_ch_G0000342;Parent=HG00642_ch_T0001052;transcript_name=HG00642_ch_T0001052;gene_name=PSMA6P1;ID=exon:HG00642_ch_T0001052:0;Name=PSMA6P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14265355	14325698	.	+	.	source_gene_common_name=ENSG00000297994;source_gene=ENSG00000297994.1;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;gene_id=HG00642_ch_G0000343;gene_biotype=lncRNA;gene_name=ENSG00000297994;gene_sources=liftoff;ID=HG00642_ch_G0000343;Name=ENSG00000297994
HG00642_chrY	CAT	transcript	14265355	14325698	1000	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_G0000343;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=HG00642_ch_T0001059;Name=ENSG00000297994
HG00642_chrY	CAT	exon	14265355	14265398	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_T0001059;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=exon:HG00642_ch_T0001059:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14265399	14266167	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_T0001059;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=intron:HG00642_ch_T0001059:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14266168	14266239	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_T0001059;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=exon:HG00642_ch_T0001059:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14266240	14325377	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_T0001059;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=intron:HG00642_ch_T0001059:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14325378	14325698	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00642_ch_T0001059;gene_id=HG00642_ch_G0000343;Parent=HG00642_ch_T0001059;transcript_name=HG00642_ch_T0001059;gene_name=ENSG00000297994;ID=exon:HG00642_ch_T0001059:2;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14403302	14405427	.	+	.	source_gene_common_name=TMSB4Y;source_gene=ENSG00000154620.6;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;gene_id=HG00642_ch_G0000344;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG00642_ch_G0000344;Name=TMSB4Y
HG00642_chrY	CAT	transcript	14403302	14405427	100	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_G0000344;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=HG00642_ch_T0001060;Name=TMSB4Y
HG00642_chrY	CAT	exon	14403302	14403838	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=exon:HG00642_ch_T0001060:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14403739	14403838	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=CDS:HG00642_ch_T0001060:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14403739	14403741	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=start_codon:HG00642_ch_T0001060;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14403839	14404627	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=intron:HG00642_ch_T0001060:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14404628	14405427	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=exon:HG00642_ch_T0001060:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14404628	14404662	.	+	2	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=CDS:HG00642_ch_T0001060:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14404660	14404662	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00642_ch_T0001060;gene_id=HG00642_ch_G0000344;Parent=HG00642_ch_T0001060;transcript_name=HG00642_ch_T0001060;gene_name=TMSB4Y;ID=stop_codon:HG00642_ch_T0001060;Name=TMSB4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14403305	14615674	.	+	.	source_gene_common_name=ENSG00000290853;source_gene=ENSG00000290853.2;gene_id=HG00642_ch_G0000345;gene_biotype=lncRNA;gene_name=ENSG00000290853;gene_sources=liftoff;ID=HG00642_ch_G0000345;Name=ENSG00000290853
HG00642_chrY	CAT	transcript	14403305	14588409	1000	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_G0000345;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=HG00642_ch_T0001061;Name=ENSG00000290853
HG00642_chrY	CAT	exon	14403305	14403838	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14403839	14454053	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14454054	14454203	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14454204	14557944	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14557945	14558074	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14558075	14559095	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14559096	14559249	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14559250	14568494	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14568495	14568556	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14568557	14571060	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14571061	14571226	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14571227	14586686	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001061:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14586687	14588409	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001061;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001061;transcript_name=HG00642_ch_T0001061;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001061:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14452505	14571134	1000	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_G0000345;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=HG00642_ch_T0001063;Name=ENSG00000290853
HG00642_chrY	CAT	exon	14452505	14452566	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14452567	14454053	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14454054	14454203	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14454204	14490332	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14490333	14490380	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14490381	14557944	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14557945	14558074	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14558075	14559095	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14559096	14559249	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14559250	14568494	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14568495	14568556	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14568557	14571060	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001063:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14571061	14571134	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001063;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001063;transcript_name=HG00642_ch_T0001063;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001063:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	14571110	14615674	1000	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_G0000345;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=HG00642_ch_T0001064;Name=ENSG00000290853
HG00642_chrY	CAT	exon	14571110	14571226	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001064;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001064:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14571227	14586686	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001064;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001064:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14586687	14586892	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001064;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001064:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14586893	14615195	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001064;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=intron:HG00642_ch_T0001064:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14615196	14615674	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;AdditionalSources=liftoff;transcript_id=HG00642_ch_T0001064;gene_id=HG00642_ch_G0000345;Parent=HG00642_ch_T0001064;transcript_name=HG00642_ch_T0001064;gene_name=ENSG00000290853;ID=exon:HG00642_ch_T0001064:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14451063	14615254	.	+	.	source_gene_common_name=ANOS2P;source_gene=ENSG00000241859.8;gene_id=HG00642_ch_G0000346;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANOS2P;gene_sources=liftoff;ID=HG00642_ch_G0000346;Name=ANOS2P
HG00642_chrY	CAT	transcript	14451063	14615254	1000	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_G0000346;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=HG00642_ch_T0001062;Name=ANOS2P
HG00642_chrY	CAT	exon	14451063	14451412	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:0;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14451413	14490332	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:0;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14490333	14490380	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:1;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14490381	14557929	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:1;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14557930	14558152	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:2;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14558153	14568494	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:2;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14568495	14568678	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:3;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14568679	14571109	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:3;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14571110	14571226	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:4;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14571227	14586686	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:4;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14586687	14586892	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:5;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14586893	14602302	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:5;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14602303	14602397	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:6;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14602398	14605109	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:6;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14605110	14605280	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:7;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14605281	14606254	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:7;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14606255	14606475	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:8;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14606476	14607600	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:8;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14607601	14607742	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:9;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14607743	14615195	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=intron:HG00642_ch_T0001062:9;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14615196	14615254	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00642_ch_T0001062;gene_id=HG00642_ch_G0000346;Parent=HG00642_ch_T0001062;transcript_name=HG00642_ch_T0001062;gene_name=ANOS2P;ID=exon:HG00642_ch_T0001062:10;Name=ANOS2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14685208	14685909	.	-	.	source_gene_common_name=VCY;source_gene=ENSG00000129864.7;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;gene_id=HG00642_ch_G0000347;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff;ID=HG00642_ch_G0000347;Name=VCY
HG00642_chrY	CAT	transcript	14685208	14685909	100	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_G0000347;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=HG00642_ch_T0001065;Name=VCY
HG00642_chrY	CAT	exon	14685208	14685582	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=exon:HG00642_ch_T0001065:0;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14685307	14685582	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=CDS:HG00642_ch_T0001065:0;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14685307	14685309	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=stop_codon:HG00642_ch_T0001065;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14685583	14685774	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=intron:HG00642_ch_T0001065:0;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14685775	14685909	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=exon:HG00642_ch_T0001065:1;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14685775	14685876	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=CDS:HG00642_ch_T0001065:1;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14685874	14685876	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00642_ch_T0001065;gene_id=HG00642_ch_G0000347;Parent=HG00642_ch_T0001065;transcript_name=HG00642_ch_T0001065;gene_name=VCY;ID=start_codon:HG00642_ch_T0001065;Name=VCY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14755676	14756407	.	+	.	source_gene_common_name=VCY1B;source_gene=ENSG00000129862.7;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;gene_id=HG00642_ch_G0000348;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff;ID=HG00642_ch_G0000348;Name=VCY1B
HG00642_chrY	CAT	transcript	14755676	14756407	100	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_G0000348;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=HG00642_ch_T0001066;Name=VCY1B
HG00642_chrY	CAT	exon	14755676	14755840	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=exon:HG00642_ch_T0001066:0;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14755739	14755840	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=CDS:HG00642_ch_T0001066:0;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	14755739	14755741	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=start_codon:HG00642_ch_T0001066;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14755841	14756032	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=intron:HG00642_ch_T0001066:0;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14756033	14756407	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=exon:HG00642_ch_T0001066:1;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	14756033	14756308	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=CDS:HG00642_ch_T0001066:1;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	14756306	14756308	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00642_ch_T0001066;gene_id=HG00642_ch_G0000348;Parent=HG00642_ch_T0001066;transcript_name=HG00642_ch_T0001066;gene_name=VCY1B;ID=stop_codon:HG00642_ch_T0001066;Name=VCY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14780525	14786050	.	+	.	source_gene_common_name=PNPLA4P1;source_gene=ENSG00000235451.1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;gene_id=HG00642_ch_G0000349;gene_biotype=unprocessed_pseudogene;gene_name=PNPLA4P1;gene_sources=liftoff;ID=HG00642_ch_G0000349;Name=PNPLA4P1
HG00642_chrY	CAT	transcript	14780525	14786050	1000	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_G0000349;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=HG00642_ch_T0001067;Name=PNPLA4P1
HG00642_chrY	CAT	exon	14780525	14780619	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_T0001067;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=exon:HG00642_ch_T0001067:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14780620	14780755	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_T0001067;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=intron:HG00642_ch_T0001067:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14780756	14780899	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_T0001067;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=exon:HG00642_ch_T0001067:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14780900	14785984	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_T0001067;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=intron:HG00642_ch_T0001067:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14785985	14786050	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00642_ch_T0001067;gene_id=HG00642_ch_G0000349;Parent=HG00642_ch_T0001067;transcript_name=HG00642_ch_T0001067;gene_name=PNPLA4P1;ID=exon:HG00642_ch_T0001067:2;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14801038	14801173	.	-	.	source_gene_common_name=ENSG00000289706;source_gene=ENSG00000289706.1;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;gene_id=HG00642_ch_G0000350;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289706;gene_sources=liftoff;ID=HG00642_ch_G0000350;Name=ENSG00000289706
HG00642_chrY	CAT	transcript	14801038	14801173	1000	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG00642_ch_T0001068;gene_id=HG00642_ch_G0000350;Parent=HG00642_ch_G0000350;transcript_name=HG00642_ch_T0001068;gene_name=ENSG00000289706;ID=HG00642_ch_T0001068;Name=ENSG00000289706
HG00642_chrY	CAT	exon	14801038	14801173	.	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG00642_ch_T0001068;gene_id=HG00642_ch_G0000350;Parent=HG00642_ch_T0001068;transcript_name=HG00642_ch_T0001068;gene_name=ENSG00000289706;ID=exon:HG00642_ch_T0001068:0;Name=ENSG00000289706;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	14975663	14976940	.	-	.	source_gene_common_name=ENSG00000223517;source_gene=ENSG00000223517.1;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;gene_id=HG00642_ch_G0000351;gene_biotype=lncRNA;gene_name=ENSG00000223517;gene_sources=liftoff;ID=HG00642_ch_G0000351;Name=ENSG00000223517
HG00642_chrY	CAT	transcript	14975663	14976940	1000	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00642_ch_T0001069;gene_id=HG00642_ch_G0000351;Parent=HG00642_ch_G0000351;transcript_name=HG00642_ch_T0001069;gene_name=ENSG00000223517;ID=HG00642_ch_T0001069;Name=ENSG00000223517
HG00642_chrY	CAT	exon	14975663	14976062	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00642_ch_T0001069;gene_id=HG00642_ch_G0000351;Parent=HG00642_ch_T0001069;transcript_name=HG00642_ch_T0001069;gene_name=ENSG00000223517;ID=exon:HG00642_ch_T0001069:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	14976063	14976800	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00642_ch_T0001069;gene_id=HG00642_ch_G0000351;Parent=HG00642_ch_T0001069;transcript_name=HG00642_ch_T0001069;gene_name=ENSG00000223517;ID=intron:HG00642_ch_T0001069:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	14976801	14976940	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00642_ch_T0001069;gene_id=HG00642_ch_G0000351;Parent=HG00642_ch_T0001069;transcript_name=HG00642_ch_T0001069;gene_name=ENSG00000223517;ID=exon:HG00642_ch_T0001069:1;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15222072	15545160	.	+	.	source_gene_common_name=NLGN4Y;source_gene=ENSG00000165246.15;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;gene_id=HG00642_ch_G0000352;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff;ID=HG00642_ch_G0000352;Name=NLGN4Y
HG00642_chrY	CAT	transcript	15222072	15545145	100	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=HG00642_ch_T0001070;Name=NLGN4Y
HG00642_chrY	CAT	exon	15222072	15222440	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15222441	15321501	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15322084	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15322084	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001070;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15418957	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15418958	15419017	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15523693	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001070:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15545145	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001070:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001070:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00642_ch_T0001070;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001070;transcript_name=HG00642_ch_T0001070;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001070;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15222137	15321990	1000	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00642_ch_T0001071;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001071;gene_name=NLGN4Y;ID=HG00642_ch_T0001071;Name=NLGN4Y
HG00642_chrY	CAT	exon	15222137	15222440	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00642_ch_T0001071;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001071;transcript_name=HG00642_ch_T0001071;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001071:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15222441	15321501	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00642_ch_T0001071;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001071;transcript_name=HG00642_ch_T0001071;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001071:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15321990	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00642_ch_T0001071;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001071;transcript_name=HG00642_ch_T0001071;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001071:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15222251	15545156	100	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=HG00642_ch_T0001072;Name=NLGN4Y
HG00642_chrY	CAT	exon	15222251	15222440	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15222441	15418957	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001072:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001072:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422652	15422772	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001072:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15422652	15422654	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001072;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15523693	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001072:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001072:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001072:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001072:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001072:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15545156	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001072:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001072:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00642_ch_T0001072;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001072;transcript_name=HG00642_ch_T0001072;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001072;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15223245	15543232	100	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=HG00642_ch_T0001073;Name=NLGN4Y
HG00642_chrY	CAT	exon	15223245	15223397	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15223398	15321513	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001073:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321514	15322084	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15322084	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001073:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001073;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15422619	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001073:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001073:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15523693	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001073:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001073:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001073:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001073:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001073:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15543232	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001073:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001073:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00642_ch_T0001073;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001073;transcript_name=HG00642_ch_T0001073;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001073;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15223245	15543232	100	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=HG00642_ch_T0001074;Name=NLGN4Y
HG00642_chrY	CAT	exon	15223245	15223397	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15223398	15321513	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321514	15322084	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15322084	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001074;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15418957	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15418958	15419017	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15448121	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15448122	15448232	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15448122	15448232	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15448233	15523693	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001074:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15543232	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001074:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001074:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00642_ch_T0001074;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001074;transcript_name=HG00642_ch_T0001074;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001074;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15223245	15543232	1000	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=HG00642_ch_T0001075;Name=NLGN4Y
HG00642_chrY	CAT	exon	15223245	15223397	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15223398	15321513	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321514	15322084	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15418957	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15448121	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15448122	15448232	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15448233	15451179	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15451180	15451301	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15451302	15523693	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001075:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15543232	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00642_ch_T0001075;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001075;transcript_name=HG00642_ch_T0001075;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001075:8;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15223466	15321713	100	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=HG00642_ch_T0001076;Name=NLGN4Y
HG00642_chrY	CAT	exon	15223466	15223783	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001076;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001076:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15223784	15321501	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001076;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001076:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15321713	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001076;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001076:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15321713	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001076;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001076:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00642_ch_T0001076;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001076;transcript_name=HG00642_ch_T0001076;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001076;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15224028	15545160	100	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=HG00642_ch_T0001077;Name=NLGN4Y
HG00642_chrY	CAT	exon	15224028	15224207	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15224208	15321501	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15322084	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15322084	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001077;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15418957	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15418958	15419017	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15523693	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001077:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15545160	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001077:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001077:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00642_ch_T0001077;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001077;transcript_name=HG00642_ch_T0001077;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001077;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15224028	15321861	1000	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00642_ch_T0001078;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001078;gene_name=NLGN4Y;ID=HG00642_ch_T0001078;Name=NLGN4Y
HG00642_chrY	CAT	exon	15224028	15224207	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00642_ch_T0001078;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001078;transcript_name=HG00642_ch_T0001078;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001078:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15224208	15321501	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00642_ch_T0001078;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001078;transcript_name=HG00642_ch_T0001078;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001078:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15321861	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00642_ch_T0001078;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001078;transcript_name=HG00642_ch_T0001078;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001078:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15224073	15543153	100	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=HG00642_ch_T0001079;Name=NLGN4Y
HG00642_chrY	CAT	exon	15224073	15224435	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15224436	15321501	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001079:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15321502	15322084	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321613	15322084	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001079:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	15321613	15321615	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=start_codon:HG00642_ch_T0001079;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15422619	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001079:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001079:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15523693	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001079:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15523694	15523879	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15523694	15523879	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001079:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15523880	15529235	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001079:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15529236	15530025	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15529236	15530025	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001079:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15530026	15539918	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001079:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15539919	15543153	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001079:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15539919	15540768	.	+	1	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001079:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15540766	15540768	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00642_ch_T0001079;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001079;transcript_name=HG00642_ch_T0001079;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001079;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	15321674	15433052	100	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_G0000352;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=HG00642_ch_T0001080;Name=NLGN4Y
HG00642_chrY	CAT	exon	15321674	15322084	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001080:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15321674	15322084	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001080:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15322085	15418957	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001080:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15418958	15419017	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001080:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15418958	15419017	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001080:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15419018	15422619	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001080:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15422620	15422772	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001080:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15422620	15422772	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001080:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15422773	15432954	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=intron:HG00642_ch_T0001080:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15432955	15433052	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=exon:HG00642_ch_T0001080:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	15432955	15433040	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=CDS:HG00642_ch_T0001080:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	15433038	15433040	.	+	0	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00642_ch_T0001080;gene_id=HG00642_ch_G0000352;Parent=HG00642_ch_T0001080;transcript_name=HG00642_ch_T0001080;gene_name=NLGN4Y;ID=stop_codon:HG00642_ch_T0001080;Name=NLGN4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15338588	15339850	.	+	.	source_gene_common_name=AGKP1;source_gene=ENSG00000226555.1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;gene_id=HG00642_ch_G0000353;gene_biotype=processed_pseudogene;gene_name=AGKP1;gene_sources=liftoff;ID=HG00642_ch_G0000353;Name=AGKP1
HG00642_chrY	CAT	transcript	15338588	15339850	1000	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG00642_ch_T0001081;gene_id=HG00642_ch_G0000353;Parent=HG00642_ch_G0000353;transcript_name=HG00642_ch_T0001081;gene_name=AGKP1;ID=HG00642_ch_T0001081;Name=AGKP1
HG00642_chrY	CAT	exon	15338588	15339850	.	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG00642_ch_T0001081;gene_id=HG00642_ch_G0000353;Parent=HG00642_ch_T0001081;transcript_name=HG00642_ch_T0001081;gene_name=AGKP1;ID=exon:HG00642_ch_T0001081:0;Name=AGKP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15493148	15503539	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=ENSG00000228787.1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;gene_id=HG00642_ch_G0000354;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG00642_ch_G0000354;Name=NLGN4Y-AS1
HG00642_chrY	CAT	transcript	15493148	15503539	1000	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_G0000354;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=HG00642_ch_T0001082;Name=NLGN4Y-AS1
HG00642_chrY	CAT	exon	15493148	15493493	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=exon:HG00642_ch_T0001082:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15493494	15498127	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=intron:HG00642_ch_T0001082:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15498128	15498215	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=exon:HG00642_ch_T0001082:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15498216	15500781	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=intron:HG00642_ch_T0001082:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15500782	15500850	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=exon:HG00642_ch_T0001082:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15500851	15503510	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=intron:HG00642_ch_T0001082:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15503511	15503539	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00642_ch_T0001082;gene_id=HG00642_ch_G0000354;Parent=HG00642_ch_T0001082;transcript_name=HG00642_ch_T0001082;gene_name=NLGN4Y-AS1;ID=exon:HG00642_ch_T0001082:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15607404	15607574	.	+	.	source_gene_common_name=MED13P1;source_gene=ENSG00000236131.1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;gene_id=HG00642_ch_G0000355;gene_biotype=processed_pseudogene;gene_name=MED13P1;gene_sources=liftoff;ID=HG00642_ch_G0000355;Name=MED13P1
HG00642_chrY	CAT	transcript	15607404	15607574	1000	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG00642_ch_T0001083;gene_id=HG00642_ch_G0000355;Parent=HG00642_ch_G0000355;transcript_name=HG00642_ch_T0001083;gene_name=MED13P1;ID=HG00642_ch_T0001083;Name=MED13P1
HG00642_chrY	CAT	exon	15607404	15607574	.	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG00642_ch_T0001083;gene_id=HG00642_ch_G0000355;Parent=HG00642_ch_T0001083;transcript_name=HG00642_ch_T0001083;gene_name=MED13P1;ID=exon:HG00642_ch_T0001083:0;Name=MED13P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15625202	15626354	.	-	.	source_gene_common_name=ENSG00000304558;source_gene=ENSG00000304558.1;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;gene_id=HG00642_ch_G0000356;gene_biotype=lncRNA;gene_name=ENSG00000304558;gene_sources=liftoff;ID=HG00642_ch_G0000356;Name=ENSG00000304558
HG00642_chrY	CAT	transcript	15625202	15626354	1000	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00642_ch_T0001084;gene_id=HG00642_ch_G0000356;Parent=HG00642_ch_G0000356;transcript_name=HG00642_ch_T0001084;gene_name=ENSG00000304558;ID=HG00642_ch_T0001084;Name=ENSG00000304558
HG00642_chrY	CAT	exon	15625202	15626080	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00642_ch_T0001084;gene_id=HG00642_ch_G0000356;Parent=HG00642_ch_T0001084;transcript_name=HG00642_ch_T0001084;gene_name=ENSG00000304558;ID=exon:HG00642_ch_T0001084:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15626081	15626236	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00642_ch_T0001084;gene_id=HG00642_ch_G0000356;Parent=HG00642_ch_T0001084;transcript_name=HG00642_ch_T0001084;gene_name=ENSG00000304558;ID=intron:HG00642_ch_T0001084:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15626237	15626354	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00642_ch_T0001084;gene_id=HG00642_ch_G0000356;Parent=HG00642_ch_T0001084;transcript_name=HG00642_ch_T0001084;gene_name=ENSG00000304558;ID=exon:HG00642_ch_T0001084:1;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15641051	15641254	.	-	.	source_gene_common_name=CYCSP46;source_gene=ENSG00000227949.1;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;gene_id=HG00642_ch_G0000357;gene_biotype=processed_pseudogene;gene_name=CYCSP46;gene_sources=liftoff;ID=HG00642_ch_G0000357;Name=CYCSP46
HG00642_chrY	CAT	transcript	15641051	15641254	1000	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG00642_ch_T0001085;gene_id=HG00642_ch_G0000357;Parent=HG00642_ch_G0000357;transcript_name=HG00642_ch_T0001085;gene_name=CYCSP46;ID=HG00642_ch_T0001085;Name=CYCSP46
HG00642_chrY	CAT	exon	15641051	15641254	.	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG00642_ch_T0001085;gene_id=HG00642_ch_G0000357;Parent=HG00642_ch_T0001085;transcript_name=HG00642_ch_T0001085;gene_name=CYCSP46;ID=exon:HG00642_ch_T0001085:0;Name=CYCSP46;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	15641250	15642219	.	+	.	source_gene_common_name=ENSG00000224518;source_gene=ENSG00000224518.2;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;gene_id=HG00642_ch_G0000358;gene_biotype=processed_pseudogene;gene_name=ENSG00000224518;gene_sources=liftoff;ID=HG00642_ch_G0000358;Name=ENSG00000224518
HG00642_chrY	CAT	transcript	15641250	15642219	1000	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00642_ch_T0001086;gene_id=HG00642_ch_G0000358;Parent=HG00642_ch_G0000358;transcript_name=HG00642_ch_T0001086;gene_name=ENSG00000224518;ID=HG00642_ch_T0001086;Name=ENSG00000224518
HG00642_chrY	CAT	exon	15641250	15641325	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00642_ch_T0001086;gene_id=HG00642_ch_G0000358;Parent=HG00642_ch_T0001086;transcript_name=HG00642_ch_T0001086;gene_name=ENSG00000224518;ID=exon:HG00642_ch_T0001086:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	15641326	15642164	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00642_ch_T0001086;gene_id=HG00642_ch_G0000358;Parent=HG00642_ch_T0001086;transcript_name=HG00642_ch_T0001086;gene_name=ENSG00000224518;ID=intron:HG00642_ch_T0001086:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	15642165	15642219	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00642_ch_T0001086;gene_id=HG00642_ch_G0000358;Parent=HG00642_ch_T0001086;transcript_name=HG00642_ch_T0001086;gene_name=ENSG00000224518;ID=exon:HG00642_ch_T0001086:1;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16048190	16155600	.	-	.	source_gene_common_name=PUDPP1;source_gene=ENSG00000234620.1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;gene_id=HG00642_ch_G0000359;gene_biotype=unprocessed_pseudogene;gene_name=PUDPP1;gene_sources=liftoff;ID=HG00642_ch_G0000359;Name=PUDPP1
HG00642_chrY	CAT	transcript	16048190	16155600	1000	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_G0000359;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=HG00642_ch_T0001087;Name=PUDPP1
HG00642_chrY	CAT	exon	16048190	16048394	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_T0001087;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=exon:HG00642_ch_T0001087:0;Name=PUDPP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16048395	16081119	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_T0001087;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=intron:HG00642_ch_T0001087:0;Name=PUDPP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16081120	16081369	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_T0001087;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=exon:HG00642_ch_T0001087:1;Name=PUDPP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16081370	16155560	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_T0001087;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=intron:HG00642_ch_T0001087:1;Name=PUDPP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16155561	16155600	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00642_ch_T0001087;gene_id=HG00642_ch_G0000359;Parent=HG00642_ch_T0001087;transcript_name=HG00642_ch_T0001087;gene_name=PUDPP1;ID=exon:HG00642_ch_T0001087:2;Name=PUDPP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16155533	16268666	.	+	.	source_gene_common_name=ENSG00000295583;source_gene=ENSG00000295583.1;gene_id=HG00642_ch_G0000360;gene_biotype=lncRNA;gene_name=ENSG00000295583;gene_sources=liftoff;ID=HG00642_ch_G0000360;Name=ENSG00000295583
HG00642_chrY	CAT	transcript	16155533	16266658	1000	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=HG00642_ch_T0001088;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155533	16155594	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001088:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16155595	16159819	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001088:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16159901	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001088:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159902	16246743	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001088:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16246744	16246884	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001088:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16246885	16249136	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001088:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16249137	16249258	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001088:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16249259	16266288	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001088:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16266289	16266658	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001088;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001088;transcript_name=HG00642_ch_T0001088;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001088:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155539	16268666	1000	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=HG00642_ch_T0001089;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155539	16155594	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16155595	16159819	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001089:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16159901	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159902	16246743	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001089:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16246744	16246884	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16246885	16249136	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001089:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16249137	16249258	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16249259	16266288	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001089:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16266289	16266425	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16266426	16268549	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001089:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16268550	16268666	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001089;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001089;transcript_name=HG00642_ch_T0001089;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001089:5;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155558	16161209	1000	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=HG00642_ch_T0001090;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155558	16155594	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001090;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001090:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16155595	16159819	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001090;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001090:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16159901	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001090;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001090:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159902	16160224	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001090;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001090:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16160225	16161209	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001090;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001090;transcript_name=HG00642_ch_T0001090;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001090:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155566	16160034	1000	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001091;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001091;gene_name=ENSG00000295583;ID=HG00642_ch_T0001091;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155566	16156366	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001091;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001091;transcript_name=HG00642_ch_T0001091;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001091:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16156367	16159819	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001091;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001091;transcript_name=HG00642_ch_T0001091;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001091:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16160034	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001091;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001091;transcript_name=HG00642_ch_T0001091;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001091:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155731	16161209	1000	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=HG00642_ch_T0001092;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155731	16156366	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001092;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001092:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16156367	16159819	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001092;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001092:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16159901	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001092;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001092:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159902	16160224	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001092;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001092:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16160225	16161209	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001092;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001092;transcript_name=HG00642_ch_T0001092;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001092:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155861	16156904	1000	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001093;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001093;gene_name=ENSG00000295583;ID=HG00642_ch_T0001093;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155861	16156366	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001093;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001093;transcript_name=HG00642_ch_T0001093;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001093:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16156367	16156450	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001093;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001093;transcript_name=HG00642_ch_T0001093;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001093:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16156451	16156904	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001093;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001093;transcript_name=HG00642_ch_T0001093;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001093:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155861	16160361	1000	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=HG00642_ch_T0001094;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155861	16156010	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001094;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001094:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16156011	16159819	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001094;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001094:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16159901	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001094;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001094:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159902	16160224	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001094;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001094:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16160225	16160361	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001094;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001094;transcript_name=HG00642_ch_T0001094;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001094:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	16155865	16160034	1000	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_G0000360;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=HG00642_ch_T0001095;Name=ENSG00000295583
HG00642_chrY	CAT	exon	16155865	16156366	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001095;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001095:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16156367	16159489	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001095;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001095:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159490	16159609	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001095;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001095:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16159610	16159819	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001095;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=intron:HG00642_ch_T0001095:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16159820	16160034	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00642_ch_T0001095;gene_id=HG00642_ch_G0000360;Parent=HG00642_ch_T0001095;transcript_name=HG00642_ch_T0001095;gene_name=ENSG00000295583;ID=exon:HG00642_ch_T0001095:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16246742	16292846	.	+	.	source_gene_common_name=STSP1;source_gene=ENSG00000227166.1;gene_id=HG00642_ch_G0000361;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=STSP1;gene_sources=liftoff;ID=HG00642_ch_G0000361;Name=STSP1
HG00642_chrY	CAT	transcript	16246742	16292846	1000	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_G0000361;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=HG00642_ch_T0001096;Name=STSP1
HG00642_chrY	CAT	exon	16246742	16246884	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=exon:HG00642_ch_T0001096:0;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16246885	16249136	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=intron:HG00642_ch_T0001096:0;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16249137	16249467	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=exon:HG00642_ch_T0001096:1;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16249468	16251111	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=intron:HG00642_ch_T0001096:1;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16251112	16251530	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=exon:HG00642_ch_T0001096:2;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16251531	16266288	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=intron:HG00642_ch_T0001096:2;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16266289	16266445	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=exon:HG00642_ch_T0001096:3;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16266446	16292745	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=intron:HG00642_ch_T0001096:3;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16292746	16292846	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00642_ch_T0001096;gene_id=HG00642_ch_G0000361;Parent=HG00642_ch_T0001096;transcript_name=HG00642_ch_T0001096;gene_name=STSP1;ID=exon:HG00642_ch_T0001096:4;Name=STSP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16389888	16397809	.	-	.	source_gene_common_name=ENSG00000295335;source_gene=ENSG00000295335.1;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;gene_id=HG00642_ch_G0000362;gene_biotype=lncRNA;gene_name=ENSG00000295335;gene_sources=liftoff;ID=HG00642_ch_G0000362;Name=ENSG00000295335
HG00642_chrY	CAT	transcript	16389888	16397809	1000	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00642_ch_T0001097;gene_id=HG00642_ch_G0000362;Parent=HG00642_ch_G0000362;transcript_name=HG00642_ch_T0001097;gene_name=ENSG00000295335;ID=HG00642_ch_T0001097;Name=ENSG00000295335
HG00642_chrY	CAT	exon	16389888	16390242	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00642_ch_T0001097;gene_id=HG00642_ch_G0000362;Parent=HG00642_ch_T0001097;transcript_name=HG00642_ch_T0001097;gene_name=ENSG00000295335;ID=exon:HG00642_ch_T0001097:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16390243	16397765	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00642_ch_T0001097;gene_id=HG00642_ch_G0000362;Parent=HG00642_ch_T0001097;transcript_name=HG00642_ch_T0001097;gene_name=ENSG00000295335;ID=intron:HG00642_ch_T0001097:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16397766	16397809	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00642_ch_T0001097;gene_id=HG00642_ch_G0000362;Parent=HG00642_ch_T0001097;transcript_name=HG00642_ch_T0001097;gene_name=ENSG00000295335;ID=exon:HG00642_ch_T0001097:1;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16757578	16824465	.	-	.	source_gene_common_name=ENSG00000300212;source_gene=ENSG00000300212.1;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;gene_id=HG00642_ch_G0000363;gene_biotype=lncRNA;gene_name=ENSG00000300212;gene_sources=liftoff;ID=HG00642_ch_G0000363;Name=ENSG00000300212
HG00642_chrY	CAT	transcript	16757578	16824465	1000	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_G0000363;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=HG00642_ch_T0001098;Name=ENSG00000300212
HG00642_chrY	CAT	exon	16757578	16758275	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=exon:HG00642_ch_T0001098:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16758276	16822104	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=intron:HG00642_ch_T0001098:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16822105	16822249	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=exon:HG00642_ch_T0001098:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16822250	16823790	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=intron:HG00642_ch_T0001098:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16823791	16823970	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=exon:HG00642_ch_T0001098:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16823971	16824190	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=intron:HG00642_ch_T0001098:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16824191	16824465	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00642_ch_T0001098;gene_id=HG00642_ch_G0000363;Parent=HG00642_ch_T0001098;transcript_name=HG00642_ch_T0001098;gene_name=ENSG00000300212;ID=exon:HG00642_ch_T0001098:3;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16837919	16838050	.	-	.	source_gene_common_name=ENSG00000252689;source_gene=ENSG00000252689.1;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;gene_id=HG00642_ch_G0000364;gene_biotype=snoRNA;gene_name=ENSG00000252689;gene_sources=liftoff;ID=HG00642_ch_G0000364;Name=ENSG00000252689
HG00642_chrY	CAT	transcript	16837919	16838050	1000	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG00642_ch_T0001099;gene_id=HG00642_ch_G0000364;Parent=HG00642_ch_G0000364;transcript_name=HG00642_ch_T0001099;gene_name=ENSG00000252689;ID=HG00642_ch_T0001099;Name=ENSG00000252689
HG00642_chrY	CAT	exon	16837919	16838050	.	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG00642_ch_T0001099;gene_id=HG00642_ch_G0000364;Parent=HG00642_ch_T0001099;transcript_name=HG00642_ch_T0001099;gene_name=ENSG00000252689;ID=exon:HG00642_ch_T0001099:0;Name=ENSG00000252689;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16885813	16890972	.	+	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;gene_id=HG00642_ch_G0000365;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG00642_ch_G0000365;Name=ENSG00000309341
HG00642_chrY	CAT	transcript	16885813	16890972	1000	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00642_ch_T0001100;gene_id=HG00642_ch_G0000365;Parent=HG00642_ch_G0000365;transcript_name=HG00642_ch_T0001100;gene_name=ENSG00000309341;ID=HG00642_ch_T0001100;Name=ENSG00000309341
HG00642_chrY	CAT	exon	16885813	16885968	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00642_ch_T0001100;gene_id=HG00642_ch_G0000365;Parent=HG00642_ch_T0001100;transcript_name=HG00642_ch_T0001100;gene_name=ENSG00000309341;ID=exon:HG00642_ch_T0001100:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	16885969	16890797	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00642_ch_T0001100;gene_id=HG00642_ch_G0000365;Parent=HG00642_ch_T0001100;transcript_name=HG00642_ch_T0001100;gene_name=ENSG00000309341;ID=intron:HG00642_ch_T0001100:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	16890798	16890972	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00642_ch_T0001100;gene_id=HG00642_ch_G0000365;Parent=HG00642_ch_T0001100;transcript_name=HG00642_ch_T0001100;gene_name=ENSG00000309341;ID=exon:HG00642_ch_T0001100:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	16948598	16948704	.	+	.	source_gene_common_name=RNU6-109P;source_gene=ENSG00000252173.1;alternative_source_transcripts=ENST00000516364.1;gene_id=HG00642_ch_G0000366;gene_biotype=snRNA;gene_name=RNU6-109P;gene_sources=liftoff;ID=HG00642_ch_G0000366;Name=RNU6-109P
HG00642_chrY	CAT	transcript	16948598	16948704	1000	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1;transcript_id=HG00642_ch_T0001101;gene_id=HG00642_ch_G0000366;Parent=HG00642_ch_G0000366;transcript_name=HG00642_ch_T0001101;gene_name=RNU6-109P;ID=HG00642_ch_T0001101;Name=RNU6-109P
HG00642_chrY	CAT	exon	16948598	16948704	.	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1;transcript_id=HG00642_ch_T0001101;gene_id=HG00642_ch_G0000366;Parent=HG00642_ch_T0001101;transcript_name=HG00642_ch_T0001101;gene_name=RNU6-109P;ID=exon:HG00642_ch_T0001101:0;Name=RNU6-109P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	17035952	17036058	.	-	.	source_gene_common_name=RNU6-184P;source_gene=ENSG00000252323.1;alternative_source_transcripts=ENST00000516514.1;gene_id=HG00642_ch_G0000367;gene_biotype=snRNA;gene_name=RNU6-184P;gene_sources=liftoff;ID=HG00642_ch_G0000367;Name=RNU6-184P
HG00642_chrY	CAT	transcript	17035952	17036058	1000	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1;transcript_id=HG00642_ch_T0001102;gene_id=HG00642_ch_G0000367;Parent=HG00642_ch_G0000367;transcript_name=HG00642_ch_T0001102;gene_name=RNU6-184P;ID=HG00642_ch_T0001102;Name=RNU6-184P
HG00642_chrY	CAT	exon	17035952	17036058	.	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1;transcript_id=HG00642_ch_T0001102;gene_id=HG00642_ch_G0000367;Parent=HG00642_ch_T0001102;transcript_name=HG00642_ch_T0001102;gene_name=RNU6-184P;ID=exon:HG00642_ch_T0001102:0;Name=RNU6-184P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	17093703	17098861	.	-	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;gene_id=HG00642_ch_G0000368;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG00642_ch_G0000368;Name=ENSG00000309341
HG00642_chrY	CAT	transcript	17093703	17098861	1000	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00642_ch_T0001103;gene_id=HG00642_ch_G0000368;Parent=HG00642_ch_G0000368;transcript_name=HG00642_ch_T0001103;gene_name=ENSG00000309341;ID=HG00642_ch_T0001103;Name=ENSG00000309341
HG00642_chrY	CAT	exon	17093703	17093877	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00642_ch_T0001103;gene_id=HG00642_ch_G0000368;Parent=HG00642_ch_T0001103;transcript_name=HG00642_ch_T0001103;gene_name=ENSG00000309341;ID=exon:HG00642_ch_T0001103:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17093878	17098705	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00642_ch_T0001103;gene_id=HG00642_ch_G0000368;Parent=HG00642_ch_T0001103;transcript_name=HG00642_ch_T0001103;gene_name=ENSG00000309341;ID=intron:HG00642_ch_T0001103:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17098706	17098861	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00642_ch_T0001103;gene_id=HG00642_ch_G0000368;Parent=HG00642_ch_T0001103;transcript_name=HG00642_ch_T0001103;gene_name=ENSG00000309341;ID=exon:HG00642_ch_T0001103:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	17299392	17344200	.	-	.	source_gene_common_name=ENSG00000286201;source_gene=ENSG00000286201.2;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;gene_id=HG00642_ch_G0000369;gene_biotype=lncRNA;gene_name=ENSG00000286201;gene_sources=liftoff;ID=HG00642_ch_G0000369;Name=ENSG00000286201
HG00642_chrY	CAT	transcript	17299392	17344200	1000	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_G0000369;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=HG00642_ch_T0001104;Name=ENSG00000286201
HG00642_chrY	CAT	exon	17299392	17305505	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001104;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001104:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17305506	17328198	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001104;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=intron:HG00642_ch_T0001104:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17328199	17328241	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001104;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001104:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17328242	17343704	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001104;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=intron:HG00642_ch_T0001104:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17343705	17344200	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00642_ch_T0001104;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001104;transcript_name=HG00642_ch_T0001104;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001104:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	17300801	17328348	1000	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_G0000369;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=HG00642_ch_T0001105;Name=ENSG00000286201
HG00642_chrY	CAT	exon	17300801	17301246	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001105:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17301247	17305388	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=intron:HG00642_ch_T0001105:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17305389	17305505	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001105:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17305506	17319132	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=intron:HG00642_ch_T0001105:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17319133	17319224	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001105:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	17319225	17328198	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=intron:HG00642_ch_T0001105:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	17328199	17328348	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00642_ch_T0001105;gene_id=HG00642_ch_G0000369;Parent=HG00642_ch_T0001105;transcript_name=HG00642_ch_T0001105;gene_name=ENSG00000286201;ID=exon:HG00642_ch_T0001105:3;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	17892483	17893309	.	+	.	source_gene_common_name=SURF6P1;source_gene=ENSG00000228518.1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;gene_id=HG00642_ch_G0000370;gene_biotype=processed_pseudogene;gene_name=SURF6P1;gene_sources=liftoff;ID=HG00642_ch_G0000370;Name=SURF6P1
HG00642_chrY	CAT	transcript	17892483	17893309	1000	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG00642_ch_T0001106;gene_id=HG00642_ch_G0000370;Parent=HG00642_ch_G0000370;transcript_name=HG00642_ch_T0001106;gene_name=SURF6P1;ID=HG00642_ch_T0001106;Name=SURF6P1
HG00642_chrY	CAT	exon	17892483	17893309	.	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG00642_ch_T0001106;gene_id=HG00642_ch_G0000370;Parent=HG00642_ch_T0001106;transcript_name=HG00642_ch_T0001106;gene_name=SURF6P1;ID=exon:HG00642_ch_T0001106:0;Name=SURF6P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18164506	18164841	.	-	.	source_gene_common_name=ELOCP35;source_gene=ENSG00000271595.1;alternative_source_transcripts=ENST00000604289.1;gene_id=HG00642_ch_G0000371;gene_biotype=processed_pseudogene;gene_name=ELOCP35;gene_sources=liftoff;ID=HG00642_ch_G0000371;Name=ELOCP35
HG00642_chrY	CAT	transcript	18164506	18164841	1000	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=HG00642_ch_T0001107;gene_id=HG00642_ch_G0000371;Parent=HG00642_ch_G0000371;transcript_name=HG00642_ch_T0001107;gene_name=ELOCP35;ID=HG00642_ch_T0001107;Name=ELOCP35
HG00642_chrY	CAT	exon	18164506	18164841	.	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=HG00642_ch_T0001107;gene_id=HG00642_ch_G0000371;Parent=HG00642_ch_T0001107;transcript_name=HG00642_ch_T0001107;gene_name=ELOCP35;ID=exon:HG00642_ch_T0001107:0;Name=ELOCP35;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18200585	18216796	.	+	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3_1;alternative_source_transcripts=ENST00000421205.2;gene_id=HG00642_ch_G0000372;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG00642_ch_G0000372;Name=FAM41AY2
HG00642_chrY	CAT	transcript	18200585	18214645	1000	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_G0000372;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=HG00642_ch_T0001108;Name=FAM41AY2
HG00642_chrY	CAT	exon	18200585	18200742	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18200743	18201337	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18201338	18201387	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18201388	18212724	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18212725	18212853	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18212854	18213100	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18213101	18213194	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18213195	18213787	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18213788	18213958	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18213959	18214067	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18214068	18214161	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18214162	18214435	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001108:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18214436	18214645	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=ENST00000421205.2;transcript_id=HG00642_ch_T0001108;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001108;transcript_name=HG00642_ch_T0001108;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001108:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18214515	18216796	1000	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_G0000372;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=HG00642_ch_T0001110;Name=FAM41AY2
HG00642_chrY	CAT	exon	18214515	18214645	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001110;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001110:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18214646	18215338	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001110;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001110:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18215339	18215560	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001110;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001110:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18215561	18215642	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001110;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001110:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18215643	18216796	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001110;gene_id=HG00642_ch_G0000372;Parent=HG00642_ch_T0001110;transcript_name=HG00642_ch_T0001110;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001110:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18214129	18216342	.	+	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=HG00642_ch_G0000373;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=HG00642_ch_G0000373;Name=ENSG00000282909
HG00642_chrY	CAT	transcript	18214129	18216342	1000	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_G0000373;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=HG00642_ch_T0001109;Name=ENSG00000282909
HG00642_chrY	CAT	exon	18214129	18214337	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18214338	18214380	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001109:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18214381	18214645	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18214646	18214734	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001109:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18214735	18214854	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18214855	18215179	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001109:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18215180	18215274	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18215275	18215642	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001109:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18215643	18215759	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18215760	18216215	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001109:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18216216	18216342	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001109;gene_id=HG00642_ch_G0000373;Parent=HG00642_ch_T0001109;transcript_name=HG00642_ch_T0001109;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001109:5;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18216463	18218665	.	-	.	source_gene_common_name=TUBB1P2;source_gene=ENSG00000228578.1;gene_id=HG00642_ch_G0000374;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P2;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000374;Name=TUBB1P2
HG00642_chrY	CAT	transcript	18216463	18218665	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_G0000374;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=HG00642_ch_T0001111;Name=TUBB1P2
HG00642_chrY	CAT	exon	18216463	18217511	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001111;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001111:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18217512	18218023	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001111;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=intron:HG00642_ch_T0001111:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18218024	18218303	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001111;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001111:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18218304	18218608	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001111;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=intron:HG00642_ch_T0001111:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18218609	18218665	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001111;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001111;transcript_name=HG00642_ch_T0001111;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001111:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18216463	18218665	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_G0000374;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=HG00642_ch_T0001112;Name=TUBB1P2
HG00642_chrY	CAT	exon	18216463	18217511	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001112:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18217512	18218023	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=intron:HG00642_ch_T0001112:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18218024	18218114	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001112:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18218115	18218194	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=intron:HG00642_ch_T0001112:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18218195	18218303	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001112:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18218304	18218608	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=intron:HG00642_ch_T0001112:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18218609	18218665	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00642_ch_T0001112;gene_id=HG00642_ch_G0000374;Parent=HG00642_ch_T0001112;transcript_name=HG00642_ch_T0001112;gene_name=TUBB1P2;ID=exon:HG00642_ch_T0001112:3;Name=TUBB1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18251714	18279594	.	-	.	source_gene_common_name=FAM224B;source_gene=ENSG00000230663.2;alternative_source_transcripts=ENST00000729283.1;gene_id=HG00642_ch_G0000375;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG00642_ch_G0000375;Name=FAM224B
HG00642_chrY	CAT	transcript	18251714	18279499	1000	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=HG00642_ch_T0001113;Name=FAM224B
HG00642_chrY	CAT	exon	18251714	18252024	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001113;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=exon:HG00642_ch_T0001113:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18252025	18276332	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001113;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=intron:HG00642_ch_T0001113:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001113;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=exon:HG00642_ch_T0001113:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001113;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=intron:HG00642_ch_T0001113:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279499	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00642_ch_T0001113;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001113;transcript_name=HG00642_ch_T0001113;gene_name=FAM224B;ID=exon:HG00642_ch_T0001113:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252429	18279388	1000	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=HG00642_ch_T0001114;Name=FAM224B
HG00642_chrY	CAT	exon	18252429	18253583	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=exon:HG00642_ch_T0001114:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=intron:HG00642_ch_T0001114:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=exon:HG00642_ch_T0001114:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18255404	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=intron:HG00642_ch_T0001114:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18255405	18255639	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=exon:HG00642_ch_T0001114:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18255640	18276332	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=intron:HG00642_ch_T0001114:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=exon:HG00642_ch_T0001114:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=intron:HG00642_ch_T0001114:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279388	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00642_ch_T0001114;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001114;transcript_name=HG00642_ch_T0001114;gene_name=FAM224B;ID=exon:HG00642_ch_T0001114:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252429	18279496	1000	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=HG00642_ch_T0001115;Name=FAM224B
HG00642_chrY	CAT	exon	18252429	18253583	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=exon:HG00642_ch_T0001115:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=intron:HG00642_ch_T0001115:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=exon:HG00642_ch_T0001115:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=intron:HG00642_ch_T0001115:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=exon:HG00642_ch_T0001115:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=intron:HG00642_ch_T0001115:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279496	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00642_ch_T0001115;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001115;transcript_name=HG00642_ch_T0001115;gene_name=FAM224B;ID=exon:HG00642_ch_T0001115:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252432	18279472	1000	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=HG00642_ch_T0001116;Name=FAM224B
HG00642_chrY	CAT	exon	18252432	18253583	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=exon:HG00642_ch_T0001116:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=intron:HG00642_ch_T0001116:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=exon:HG00642_ch_T0001116:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18274867	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=intron:HG00642_ch_T0001116:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18274868	18274997	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=exon:HG00642_ch_T0001116:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=intron:HG00642_ch_T0001116:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=exon:HG00642_ch_T0001116:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=intron:HG00642_ch_T0001116:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279472	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00642_ch_T0001116;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001116;transcript_name=HG00642_ch_T0001116;gene_name=FAM224B;ID=exon:HG00642_ch_T0001116:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252911	18279467	1000	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=HG00642_ch_T0001117;Name=FAM224B
HG00642_chrY	CAT	exon	18252911	18253583	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18271026	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18271027	18271083	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18271084	18271508	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18271509	18271582	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18271583	18272376	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18272377	18272532	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18272533	18274867	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18274868	18274997	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:5;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:5;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:6;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:6;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279183	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:7;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279184	18279299	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=intron:HG00642_ch_T0001117:7;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279467	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00642_ch_T0001117;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001117;transcript_name=HG00642_ch_T0001117;gene_name=FAM224B;ID=exon:HG00642_ch_T0001117:8;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252923	18279508	1000	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=HG00642_ch_T0001118;Name=FAM224B
HG00642_chrY	CAT	exon	18252923	18253583	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=exon:HG00642_ch_T0001118:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=intron:HG00642_ch_T0001118:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=exon:HG00642_ch_T0001118:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=intron:HG00642_ch_T0001118:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=exon:HG00642_ch_T0001118:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=intron:HG00642_ch_T0001118:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=exon:HG00642_ch_T0001118:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=intron:HG00642_ch_T0001118:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279508	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00642_ch_T0001118;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001118;transcript_name=HG00642_ch_T0001118;gene_name=FAM224B;ID=exon:HG00642_ch_T0001118:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252923	18279445	1000	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=HG00642_ch_T0001119;Name=FAM224B
HG00642_chrY	CAT	exon	18252923	18253583	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=exon:HG00642_ch_T0001119:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=intron:HG00642_ch_T0001119:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=exon:HG00642_ch_T0001119:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=intron:HG00642_ch_T0001119:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276422	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=exon:HG00642_ch_T0001119:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276423	18278949	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=intron:HG00642_ch_T0001119:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279445	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00642_ch_T0001119;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001119;transcript_name=HG00642_ch_T0001119;gene_name=FAM224B;ID=exon:HG00642_ch_T0001119:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252923	18279430	1000	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=HG00642_ch_T0001120;Name=FAM224B
HG00642_chrY	CAT	exon	18252923	18252982	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18252983	18253456	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=intron:HG00642_ch_T0001120:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253457	18253583	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=intron:HG00642_ch_T0001120:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=intron:HG00642_ch_T0001120:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=intron:HG00642_ch_T0001120:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=intron:HG00642_ch_T0001120:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279430	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00642_ch_T0001120;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001120;transcript_name=HG00642_ch_T0001120;gene_name=FAM224B;ID=exon:HG00642_ch_T0001120:5;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252925	18279469	1000	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=HG00642_ch_T0001121;Name=FAM224B
HG00642_chrY	CAT	exon	18252925	18253583	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=intron:HG00642_ch_T0001121:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18274867	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=intron:HG00642_ch_T0001121:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18274868	18274997	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=intron:HG00642_ch_T0001121:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=intron:HG00642_ch_T0001121:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=intron:HG00642_ch_T0001121:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279469	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00642_ch_T0001121;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001121;transcript_name=HG00642_ch_T0001121;gene_name=FAM224B;ID=exon:HG00642_ch_T0001121:5;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18252928	18279488	1000	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=HG00642_ch_T0001122;Name=FAM224B
HG00642_chrY	CAT	exon	18252928	18252982	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=exon:HG00642_ch_T0001122:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18252983	18253456	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=intron:HG00642_ch_T0001122:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253457	18253583	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=exon:HG00642_ch_T0001122:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=intron:HG00642_ch_T0001122:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=exon:HG00642_ch_T0001122:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=intron:HG00642_ch_T0001122:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=exon:HG00642_ch_T0001122:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=intron:HG00642_ch_T0001122:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279488	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00642_ch_T0001122;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001122;transcript_name=HG00642_ch_T0001122;gene_name=FAM224B;ID=exon:HG00642_ch_T0001122:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18253195	18279438	1000	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=HG00642_ch_T0001123;Name=FAM224B
HG00642_chrY	CAT	exon	18253195	18253583	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=intron:HG00642_ch_T0001123:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18274867	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=intron:HG00642_ch_T0001123:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18274868	18274997	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=intron:HG00642_ch_T0001123:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18277304	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=intron:HG00642_ch_T0001123:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18277305	18277402	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18279299	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=intron:HG00642_ch_T0001123:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279438	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00642_ch_T0001123;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001123;transcript_name=HG00642_ch_T0001123;gene_name=FAM224B;ID=exon:HG00642_ch_T0001123:5;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18253197	18279444	1000	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=HG00642_ch_T0001124;Name=FAM224B
HG00642_chrY	CAT	exon	18253197	18253583	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=exon:HG00642_ch_T0001124:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=intron:HG00642_ch_T0001124:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=exon:HG00642_ch_T0001124:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18276332	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=intron:HG00642_ch_T0001124:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=exon:HG00642_ch_T0001124:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=intron:HG00642_ch_T0001124:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279183	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=exon:HG00642_ch_T0001124:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279184	18279299	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=intron:HG00642_ch_T0001124:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279444	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00642_ch_T0001124;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001124;transcript_name=HG00642_ch_T0001124;gene_name=FAM224B;ID=exon:HG00642_ch_T0001124:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18253200	18279284	1000	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=HG00642_ch_T0001125;Name=FAM224B
HG00642_chrY	CAT	exon	18253200	18253583	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=exon:HG00642_ch_T0001125:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=intron:HG00642_ch_T0001125:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=exon:HG00642_ch_T0001125:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18271026	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=intron:HG00642_ch_T0001125:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18271027	18271083	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=exon:HG00642_ch_T0001125:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18271084	18276332	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=intron:HG00642_ch_T0001125:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=exon:HG00642_ch_T0001125:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=intron:HG00642_ch_T0001125:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279284	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00642_ch_T0001125;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001125;transcript_name=HG00642_ch_T0001125;gene_name=FAM224B;ID=exon:HG00642_ch_T0001125:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18253211	18279488	1000	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=HG00642_ch_T0001126;Name=FAM224B
HG00642_chrY	CAT	exon	18253211	18253583	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001126;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=exon:HG00642_ch_T0001126:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253584	18253670	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001126;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=intron:HG00642_ch_T0001126:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18253671	18253755	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001126;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=exon:HG00642_ch_T0001126:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18253756	18279299	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001126;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=intron:HG00642_ch_T0001126:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279488	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00642_ch_T0001126;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001126;transcript_name=HG00642_ch_T0001126;gene_name=FAM224B;ID=exon:HG00642_ch_T0001126:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18273973	18279499	1000	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=HG00642_ch_T0001130;Name=FAM224B
HG00642_chrY	CAT	exon	18273973	18274997	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001130;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=exon:HG00642_ch_T0001130:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001130;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=intron:HG00642_ch_T0001130:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001130;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=exon:HG00642_ch_T0001130:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001130;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=intron:HG00642_ch_T0001130:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279499	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00642_ch_T0001130;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001130;transcript_name=HG00642_ch_T0001130;gene_name=FAM224B;ID=exon:HG00642_ch_T0001130:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274757	18279594	1000	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=HG00642_ch_T0001131;Name=FAM224B
HG00642_chrY	CAT	exon	18274757	18274997	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=exon:HG00642_ch_T0001131:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=intron:HG00642_ch_T0001131:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=exon:HG00642_ch_T0001131:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=intron:HG00642_ch_T0001131:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=exon:HG00642_ch_T0001131:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=intron:HG00642_ch_T0001131:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279594	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00642_ch_T0001131;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001131;transcript_name=HG00642_ch_T0001131;gene_name=FAM224B;ID=exon:HG00642_ch_T0001131:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274773	18279506	1000	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=HG00642_ch_T0001132;Name=FAM224B
HG00642_chrY	CAT	exon	18274773	18274997	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=exon:HG00642_ch_T0001132:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=intron:HG00642_ch_T0001132:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=exon:HG00642_ch_T0001132:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=intron:HG00642_ch_T0001132:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279183	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=exon:HG00642_ch_T0001132:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279184	18279299	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=intron:HG00642_ch_T0001132:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279506	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00642_ch_T0001132;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001132;transcript_name=HG00642_ch_T0001132;gene_name=FAM224B;ID=exon:HG00642_ch_T0001132:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274773	18279488	1000	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=HG00642_ch_T0001133;Name=FAM224B
HG00642_chrY	CAT	exon	18274773	18274997	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=exon:HG00642_ch_T0001133:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=intron:HG00642_ch_T0001133:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276422	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=exon:HG00642_ch_T0001133:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276423	18278949	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=intron:HG00642_ch_T0001133:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=exon:HG00642_ch_T0001133:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=intron:HG00642_ch_T0001133:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279488	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00642_ch_T0001133;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001133;transcript_name=HG00642_ch_T0001133;gene_name=FAM224B;ID=exon:HG00642_ch_T0001133:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274787	18279503	1000	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=HG00642_ch_T0001134;Name=FAM224B
HG00642_chrY	CAT	exon	18274787	18274997	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001134;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=exon:HG00642_ch_T0001134:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001134;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=intron:HG00642_ch_T0001134:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001134;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=exon:HG00642_ch_T0001134:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18279299	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001134;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=intron:HG00642_ch_T0001134:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279503	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00642_ch_T0001134;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001134;transcript_name=HG00642_ch_T0001134;gene_name=FAM224B;ID=exon:HG00642_ch_T0001134:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274791	18279460	1000	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=HG00642_ch_T0001135;Name=FAM224B
HG00642_chrY	CAT	exon	18274791	18274997	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001135;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=exon:HG00642_ch_T0001135:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001135;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=intron:HG00642_ch_T0001135:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276422	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001135;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=exon:HG00642_ch_T0001135:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276423	18278949	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001135;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=intron:HG00642_ch_T0001135:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279460	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00642_ch_T0001135;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001135;transcript_name=HG00642_ch_T0001135;gene_name=FAM224B;ID=exon:HG00642_ch_T0001135:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274791	18279445	1000	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=HG00642_ch_T0001136;Name=FAM224B
HG00642_chrY	CAT	exon	18274791	18274997	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001136;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=exon:HG00642_ch_T0001136:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001136;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=intron:HG00642_ch_T0001136:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18277402	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001136;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=exon:HG00642_ch_T0001136:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18278949	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001136;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=intron:HG00642_ch_T0001136:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279445	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00642_ch_T0001136;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001136;transcript_name=HG00642_ch_T0001136;gene_name=FAM224B;ID=exon:HG00642_ch_T0001136:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274795	18279477	1000	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=HG00642_ch_T0001137;Name=FAM224B
HG00642_chrY	CAT	exon	18274795	18274997	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=exon:HG00642_ch_T0001137:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=intron:HG00642_ch_T0001137:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=exon:HG00642_ch_T0001137:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18277304	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=intron:HG00642_ch_T0001137:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18277305	18277402	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=exon:HG00642_ch_T0001137:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18279299	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=intron:HG00642_ch_T0001137:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279477	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00642_ch_T0001137;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001137;transcript_name=HG00642_ch_T0001137;gene_name=FAM224B;ID=exon:HG00642_ch_T0001137:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274806	18279486	1000	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=HG00642_ch_T0001138;Name=FAM224B
HG00642_chrY	CAT	exon	18274806	18274997	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=exon:HG00642_ch_T0001138:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=intron:HG00642_ch_T0001138:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=exon:HG00642_ch_T0001138:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=intron:HG00642_ch_T0001138:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279085	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=exon:HG00642_ch_T0001138:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279086	18279299	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=intron:HG00642_ch_T0001138:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279486	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00642_ch_T0001138;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001138;transcript_name=HG00642_ch_T0001138;gene_name=FAM224B;ID=exon:HG00642_ch_T0001138:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274810	18279497	1000	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=HG00642_ch_T0001139;Name=FAM224B
HG00642_chrY	CAT	exon	18274810	18274997	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=exon:HG00642_ch_T0001139:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=intron:HG00642_ch_T0001139:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=exon:HG00642_ch_T0001139:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18277304	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=intron:HG00642_ch_T0001139:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18277305	18277402	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=exon:HG00642_ch_T0001139:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18278949	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=intron:HG00642_ch_T0001139:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=exon:HG00642_ch_T0001139:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=intron:HG00642_ch_T0001139:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279497	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00642_ch_T0001139;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001139;transcript_name=HG00642_ch_T0001139;gene_name=FAM224B;ID=exon:HG00642_ch_T0001139:4;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274810	18279438	1000	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=HG00642_ch_T0001140;Name=FAM224B
HG00642_chrY	CAT	exon	18274810	18274997	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=exon:HG00642_ch_T0001140:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=intron:HG00642_ch_T0001140:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=exon:HG00642_ch_T0001140:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18278949	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=intron:HG00642_ch_T0001140:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279071	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=exon:HG00642_ch_T0001140:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279072	18279299	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=intron:HG00642_ch_T0001140:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279438	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00642_ch_T0001140;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001140;transcript_name=HG00642_ch_T0001140;gene_name=FAM224B;ID=exon:HG00642_ch_T0001140:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274812	18279402	1000	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00642_ch_T0001141;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001141;gene_name=FAM224B;ID=HG00642_ch_T0001141;Name=FAM224B
HG00642_chrY	CAT	exon	18274812	18274997	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00642_ch_T0001141;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001141;transcript_name=HG00642_ch_T0001141;gene_name=FAM224B;ID=exon:HG00642_ch_T0001141:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18278949	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00642_ch_T0001141;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001141;transcript_name=HG00642_ch_T0001141;gene_name=FAM224B;ID=intron:HG00642_ch_T0001141:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279402	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00642_ch_T0001141;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001141;transcript_name=HG00642_ch_T0001141;gene_name=FAM224B;ID=exon:HG00642_ch_T0001141:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274814	18279492	1000	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=HG00642_ch_T0001142;Name=FAM224B
HG00642_chrY	CAT	exon	18274814	18274997	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=exon:HG00642_ch_T0001142:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=intron:HG00642_ch_T0001142:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276450	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=exon:HG00642_ch_T0001142:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276451	18277304	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=intron:HG00642_ch_T0001142:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18277305	18277402	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=exon:HG00642_ch_T0001142:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18278949	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=intron:HG00642_ch_T0001142:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279492	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00642_ch_T0001142;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001142;transcript_name=HG00642_ch_T0001142;gene_name=FAM224B;ID=exon:HG00642_ch_T0001142:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274814	18279445	1000	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=HG00642_ch_T0001143;Name=FAM224B
HG00642_chrY	CAT	exon	18274814	18274997	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=exon:HG00642_ch_T0001143:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=intron:HG00642_ch_T0001143:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18277402	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=exon:HG00642_ch_T0001143:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18278949	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=intron:HG00642_ch_T0001143:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=exon:HG00642_ch_T0001143:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=intron:HG00642_ch_T0001143:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279445	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00642_ch_T0001143;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001143;transcript_name=HG00642_ch_T0001143;gene_name=FAM224B;ID=exon:HG00642_ch_T0001143:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274814	18279440	1000	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=HG00642_ch_T0001144;Name=FAM224B
HG00642_chrY	CAT	exon	18274814	18274997	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001144;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=exon:HG00642_ch_T0001144:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18278949	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001144;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=intron:HG00642_ch_T0001144:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279109	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001144;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=exon:HG00642_ch_T0001144:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279110	18279299	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001144;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=intron:HG00642_ch_T0001144:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279440	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00642_ch_T0001144;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001144;transcript_name=HG00642_ch_T0001144;gene_name=FAM224B;ID=exon:HG00642_ch_T0001144:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18274814	18279439	1000	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=HG00642_ch_T0001145;Name=FAM224B
HG00642_chrY	CAT	exon	18274814	18274997	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=exon:HG00642_ch_T0001145:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18274998	18276332	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=intron:HG00642_ch_T0001145:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18276333	18276422	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=exon:HG00642_ch_T0001145:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276423	18278949	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=intron:HG00642_ch_T0001145:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279183	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=exon:HG00642_ch_T0001145:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18279184	18279299	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=intron:HG00642_ch_T0001145:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279439	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00642_ch_T0001145;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001145;transcript_name=HG00642_ch_T0001145;gene_name=FAM224B;ID=exon:HG00642_ch_T0001145:3;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18276035	18279440	1000	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00642_ch_T0001146;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001146;gene_name=FAM224B;ID=HG00642_ch_T0001146;Name=FAM224B
HG00642_chrY	CAT	exon	18276035	18276293	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00642_ch_T0001146;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001146;transcript_name=HG00642_ch_T0001146;gene_name=FAM224B;ID=exon:HG00642_ch_T0001146:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18276294	18278949	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00642_ch_T0001146;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001146;transcript_name=HG00642_ch_T0001146;gene_name=FAM224B;ID=intron:HG00642_ch_T0001146:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278950	18279440	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00642_ch_T0001146;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001146;transcript_name=HG00642_ch_T0001146;gene_name=FAM224B;ID=exon:HG00642_ch_T0001146:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18277366	18279490	1000	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_G0000375;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=HG00642_ch_T0001147;Name=FAM224B
HG00642_chrY	CAT	exon	18277366	18277402	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001147;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=exon:HG00642_ch_T0001147:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18277403	18278521	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001147;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=intron:HG00642_ch_T0001147:0;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18278522	18278718	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001147;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=exon:HG00642_ch_T0001147:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18278719	18279299	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001147;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=intron:HG00642_ch_T0001147:1;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18279300	18279490	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00642_ch_T0001147;gene_id=HG00642_ch_G0000375;Parent=HG00642_ch_T0001147;transcript_name=HG00642_ch_T0001147;gene_name=FAM224B;ID=exon:HG00642_ch_T0001147:2;Name=FAM224B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18257493	18257605	.	+	.	source_gene_common_name=RNA5SP523;source_gene=ENSG00000252667.1;alternative_source_transcripts=ENST00000516506.1;gene_id=HG00642_ch_G0000376;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP523;gene_sources=liftoff;ID=HG00642_ch_G0000376;Name=RNA5SP523
HG00642_chrY	CAT	transcript	18257493	18257605	1000	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG00642_ch_T0001127;gene_id=HG00642_ch_G0000376;Parent=HG00642_ch_G0000376;transcript_name=HG00642_ch_T0001127;gene_name=RNA5SP523;ID=HG00642_ch_T0001127;Name=RNA5SP523
HG00642_chrY	CAT	exon	18257493	18257605	.	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG00642_ch_T0001127;gene_id=HG00642_ch_G0000376;Parent=HG00642_ch_T0001127;transcript_name=HG00642_ch_T0001127;gene_name=RNA5SP523;ID=exon:HG00642_ch_T0001127:0;Name=RNA5SP523;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18259403	18259518	.	+	.	source_gene_common_name=RNA5SP522;source_gene=ENSG00000251953.1;alternative_source_transcripts=ENST00000516203.1;gene_id=HG00642_ch_G0000377;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP522;gene_sources=liftoff;ID=HG00642_ch_G0000377;Name=RNA5SP522
HG00642_chrY	CAT	transcript	18259403	18259518	1000	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG00642_ch_T0001128;gene_id=HG00642_ch_G0000377;Parent=HG00642_ch_G0000377;transcript_name=HG00642_ch_T0001128;gene_name=RNA5SP522;ID=HG00642_ch_T0001128;Name=RNA5SP522
HG00642_chrY	CAT	exon	18259403	18259518	.	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG00642_ch_T0001128;gene_id=HG00642_ch_G0000377;Parent=HG00642_ch_T0001128;transcript_name=HG00642_ch_T0001128;gene_name=RNA5SP522;ID=exon:HG00642_ch_T0001128:0;Name=RNA5SP522;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18268592	18268681	.	-	.	source_gene_common_name=ENSG00000273966;source_gene=ENSG00000273966.1;alternative_source_transcripts=ENST00000615048.1;gene_id=HG00642_ch_G0000378;gene_biotype=misc_RNA;gene_name=ENSG00000273966;gene_sources=liftoff;ID=HG00642_ch_G0000378;Name=ENSG00000273966
HG00642_chrY	CAT	transcript	18268592	18268681	1000	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG00642_ch_T0001129;gene_id=HG00642_ch_G0000378;Parent=HG00642_ch_G0000378;transcript_name=HG00642_ch_T0001129;gene_name=ENSG00000273966;ID=HG00642_ch_T0001129;Name=ENSG00000273966
HG00642_chrY	CAT	exon	18268592	18268681	.	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG00642_ch_T0001129;gene_id=HG00642_ch_G0000378;Parent=HG00642_ch_T0001129;transcript_name=HG00642_ch_T0001129;gene_name=ENSG00000273966;ID=exon:HG00642_ch_T0001129:0;Name=ENSG00000273966;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18320893	18325466	.	-	.	source_gene_common_name=CLUHP1;source_gene=ENSG00000238191.3;gene_id=HG00642_ch_G0000379;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP1;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000379;Name=CLUHP1
HG00642_chrY	CAT	transcript	18320893	18325466	1000	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_G0000379;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=HG00642_ch_T0001148;Name=CLUHP1
HG00642_chrY	CAT	exon	18320893	18321173	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:0;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18321174	18321650	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:0;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18321651	18321749	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:1;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18321750	18322438	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:1;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18322439	18322530	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:2;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18322531	18322780	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:2;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18322781	18322853	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:3;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18322854	18323497	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:3;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18323498	18323622	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:4;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18323623	18323725	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:4;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18323726	18324072	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:5;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18324073	18324254	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:5;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18324255	18324395	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:6;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18324396	18325280	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001148:6;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18325281	18325466	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001148;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001148;transcript_name=HG00642_ch_T0001148;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001148:7;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18320893	18325466	1000	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_G0000379;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=HG00642_ch_T0001149;Name=CLUHP1
HG00642_chrY	CAT	exon	18320893	18321016	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:0;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18321017	18321093	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:0;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18321094	18321173	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:1;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18321174	18321650	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:1;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18321651	18321749	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:2;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18321750	18322438	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:2;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18322439	18322530	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:3;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18322531	18322780	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:3;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18322781	18322853	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:4;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18322854	18323497	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:4;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18323498	18323622	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:5;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18323623	18323725	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:5;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18323726	18323879	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:6;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18323880	18323956	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:6;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18323957	18324072	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:7;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18324073	18324254	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:7;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18324255	18324395	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:8;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18324396	18325280	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=intron:HG00642_ch_T0001149:8;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18325281	18325466	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG00642_ch_T0001149;gene_id=HG00642_ch_G0000379;Parent=HG00642_ch_T0001149;transcript_name=HG00642_ch_T0001149;gene_name=CLUHP1;ID=exon:HG00642_ch_T0001149:9;Name=CLUHP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18328150	18329039	.	+	.	source_gene_common_name=TAF9P1;source_gene=ENSG00000226353.1;alternative_source_transcripts=ENST00000445421.1;gene_id=HG00642_ch_G0000380;gene_biotype=processed_pseudogene;gene_name=TAF9P1;gene_sources=liftoff;ID=HG00642_ch_G0000380;Name=TAF9P1
HG00642_chrY	CAT	transcript	18328150	18329039	1000	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00642_ch_T0001150;gene_id=HG00642_ch_G0000380;Parent=HG00642_ch_G0000380;transcript_name=HG00642_ch_T0001150;gene_name=TAF9P1;ID=HG00642_ch_T0001150;Name=TAF9P1
HG00642_chrY	CAT	exon	18328150	18328622	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00642_ch_T0001150;gene_id=HG00642_ch_G0000380;Parent=HG00642_ch_T0001150;transcript_name=HG00642_ch_T0001150;gene_name=TAF9P1;ID=exon:HG00642_ch_T0001150:0;Name=TAF9P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18328623	18328997	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00642_ch_T0001150;gene_id=HG00642_ch_G0000380;Parent=HG00642_ch_T0001150;transcript_name=HG00642_ch_T0001150;gene_name=TAF9P1;ID=intron:HG00642_ch_T0001150:0;Name=TAF9P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18328998	18329039	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00642_ch_T0001150;gene_id=HG00642_ch_G0000380;Parent=HG00642_ch_T0001150;transcript_name=HG00642_ch_T0001150;gene_name=TAF9P1;ID=exon:HG00642_ch_T0001150:1;Name=TAF9P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18402692	18429299	.	-	.	source_gene_common_name=ENSG00000298004;source_gene=ENSG00000298004.1;gene_id=HG00642_ch_G0000381;gene_biotype=lncRNA;gene_name=ENSG00000298004;gene_sources=liftoff;ID=HG00642_ch_G0000381;Name=ENSG00000298004
HG00642_chrY	CAT	transcript	18402692	18429262	1000	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=HG00642_ch_T0001151;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18402692	18402982	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001151:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18402983	18404575	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001151:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18404576	18404700	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001151:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18404701	18405592	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001151:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18405593	18405811	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001151:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18405812	18428945	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001151:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429262	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001151;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001151;transcript_name=HG00642_ch_T0001151;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001151:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18413648	18429349	1000	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=HG00642_ch_T0001153;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18413648	18414691	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001153;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001153:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18418377	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001153;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001153:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18418378	18418502	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001153;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001153:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418503	18428945	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001153;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001153:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429349	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001153;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001153;transcript_name=HG00642_ch_T0001153;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001153:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18413651	18429299	1000	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001154;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001154;gene_name=ENSG00000298004;ID=HG00642_ch_T0001154;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18413651	18414691	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001154;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001154;transcript_name=HG00642_ch_T0001154;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001154:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18428945	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001154;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001154;transcript_name=HG00642_ch_T0001154;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001154:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429299	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001154;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001154;transcript_name=HG00642_ch_T0001154;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001154:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18413656	18429299	1000	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=HG00642_ch_T0001155;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18413656	18414691	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001155;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001155:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18418377	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001155;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001155:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18418378	18418502	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001155;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001155:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418503	18429014	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001155;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001155:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18429015	18429299	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001155;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001155;transcript_name=HG00642_ch_T0001155;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001155:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18413656	18429293	1000	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=HG00642_ch_T0001156;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18413656	18414691	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001156;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001156:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18418377	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001156;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001156:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18418378	18418498	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001156;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001156:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418499	18428945	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001156;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001156:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429293	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001156;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001156;transcript_name=HG00642_ch_T0001156;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001156:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18414184	18429262	1000	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001157;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001157;gene_name=ENSG00000298004;ID=HG00642_ch_T0001157;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18414184	18414691	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001157;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001157;transcript_name=HG00642_ch_T0001157;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001157:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18429014	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001157;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001157;transcript_name=HG00642_ch_T0001157;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001157:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18429015	18429262	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001157;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001157;transcript_name=HG00642_ch_T0001157;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001157:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18414187	18429289	1000	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=HG00642_ch_T0001158;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18414187	18414691	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001158:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18414692	18415306	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001158:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18415307	18415358	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001158:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18415359	18418377	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001158:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18418378	18418502	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001158:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418503	18428945	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001158:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429289	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001158;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001158;transcript_name=HG00642_ch_T0001158;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001158:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18417055	18429273	1000	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752439.1;transcript_id=HG00642_ch_T0001159;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001159;gene_name=ENSG00000298004;ID=HG00642_ch_T0001159;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18417055	18418502	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752439.1;transcript_id=HG00642_ch_T0001159;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001159;transcript_name=HG00642_ch_T0001159;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001159:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418503	18429014	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752439.1;transcript_id=HG00642_ch_T0001159;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001159;transcript_name=HG00642_ch_T0001159;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001159:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18429015	18429273	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752439.1;transcript_id=HG00642_ch_T0001159;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001159;transcript_name=HG00642_ch_T0001159;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001159:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18417206	18429387	1000	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752440.1;transcript_id=HG00642_ch_T0001160;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001160;gene_name=ENSG00000298004;ID=HG00642_ch_T0001160;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18417206	18418502	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752440.1;transcript_id=HG00642_ch_T0001160;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001160;transcript_name=HG00642_ch_T0001160;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001160:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418503	18428945	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752440.1;transcript_id=HG00642_ch_T0001160;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001160;transcript_name=HG00642_ch_T0001160;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001160:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429387	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000752440.1;transcript_id=HG00642_ch_T0001160;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001160;transcript_name=HG00642_ch_T0001160;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001160:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18418339	18429289	1000	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001161;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001161;gene_name=ENSG00000298004;ID=HG00642_ch_T0001161;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18418339	18418498	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001161;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001161;transcript_name=HG00642_ch_T0001161;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001161:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18418499	18428945	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001161;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001161;transcript_name=HG00642_ch_T0001161;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001161:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429289	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001161;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001161;transcript_name=HG00642_ch_T0001161;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001161:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18423364	18429252	1000	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001163;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001163;gene_name=ENSG00000298004;ID=HG00642_ch_T0001163;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18423364	18423997	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001163;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001163;transcript_name=HG00642_ch_T0001163;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001163:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18423998	18428945	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001163;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001163;transcript_name=HG00642_ch_T0001163;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001163:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429252	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001163;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001163;transcript_name=HG00642_ch_T0001163;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001163:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18426794	18429299	1000	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001165;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_G0000381;transcript_name=HG00642_ch_T0001165;gene_name=ENSG00000298004;ID=HG00642_ch_T0001165;Name=ENSG00000298004
HG00642_chrY	CAT	exon	18426794	18427357	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001165;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001165;transcript_name=HG00642_ch_T0001165;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001165:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18427358	18428945	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001165;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001165;transcript_name=HG00642_ch_T0001165;gene_name=ENSG00000298004;ID=intron:HG00642_ch_T0001165:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18428946	18429299	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00642_ch_T0001165;gene_id=HG00642_ch_G0000381;Parent=HG00642_ch_T0001165;transcript_name=HG00642_ch_T0001165;gene_name=ENSG00000298004;ID=exon:HG00642_ch_T0001165:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18405599	18407816	.	-	.	source_gene_common_name=ENSG00000275578;source_gene=ENSG00000275578.1;gene_id=HG00642_ch_G0000382;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000275578;gene_sources=liftoff;ID=HG00642_ch_G0000382;Name=ENSG00000275578
HG00642_chrY	CAT	transcript	18405599	18407816	1000	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG00642_ch_T0001152;gene_id=HG00642_ch_G0000382;Parent=HG00642_ch_G0000382;transcript_name=HG00642_ch_T0001152;gene_name=ENSG00000275578;ID=HG00642_ch_T0001152;Name=ENSG00000275578
HG00642_chrY	CAT	exon	18405599	18405809	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG00642_ch_T0001152;gene_id=HG00642_ch_G0000382;Parent=HG00642_ch_T0001152;transcript_name=HG00642_ch_T0001152;gene_name=ENSG00000275578;ID=exon:HG00642_ch_T0001152:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18405810	18407629	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG00642_ch_T0001152;gene_id=HG00642_ch_G0000382;Parent=HG00642_ch_T0001152;transcript_name=HG00642_ch_T0001152;gene_name=ENSG00000275578;ID=intron:HG00642_ch_T0001152:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18407630	18407816	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG00642_ch_T0001152;gene_id=HG00642_ch_G0000382;Parent=HG00642_ch_T0001152;transcript_name=HG00642_ch_T0001152;gene_name=ENSG00000275578;ID=exon:HG00642_ch_T0001152:1;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18421229	18422808	.	+	.	source_gene_common_name=CDY5P;source_gene=ENSG00000226449.1;alternative_source_transcripts=ENST00000411487.1;gene_id=HG00642_ch_G0000383;gene_biotype=unprocessed_pseudogene;gene_name=CDY5P;gene_sources=liftoff;ID=HG00642_ch_G0000383;Name=CDY5P
HG00642_chrY	CAT	transcript	18421229	18422808	1000	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1;transcript_id=HG00642_ch_T0001162;gene_id=HG00642_ch_G0000383;Parent=HG00642_ch_G0000383;transcript_name=HG00642_ch_T0001162;gene_name=CDY5P;ID=HG00642_ch_T0001162;Name=CDY5P
HG00642_chrY	CAT	exon	18421229	18422808	.	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1;transcript_id=HG00642_ch_T0001162;gene_id=HG00642_ch_G0000383;Parent=HG00642_ch_T0001162;transcript_name=HG00642_ch_T0001162;gene_name=CDY5P;ID=exon:HG00642_ch_T0001162:0;Name=CDY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18426383	18426711	.	+	.	source_gene_common_name=ELOCP36;source_gene=ENSG00000225896.1;alternative_source_transcripts=ENST00000425789.1;gene_id=HG00642_ch_G0000384;gene_biotype=processed_pseudogene;gene_name=ELOCP36;gene_sources=liftoff;ID=HG00642_ch_G0000384;Name=ELOCP36
HG00642_chrY	CAT	transcript	18426383	18426711	1000	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1;transcript_id=HG00642_ch_T0001164;gene_id=HG00642_ch_G0000384;Parent=HG00642_ch_G0000384;transcript_name=HG00642_ch_T0001164;gene_name=ELOCP36;ID=HG00642_ch_T0001164;Name=ELOCP36
HG00642_chrY	CAT	exon	18426383	18426711	.	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1;transcript_id=HG00642_ch_T0001164;gene_id=HG00642_ch_G0000384;Parent=HG00642_ch_T0001164;transcript_name=HG00642_ch_T0001164;gene_name=ELOCP36;ID=exon:HG00642_ch_T0001164:0;Name=ELOCP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18456633	18457757	.	-	.	source_gene_common_name=ACTG1P2;source_gene=ENSG00000229129.1;alternative_source_transcripts=ENST00000415776.1;gene_id=HG00642_ch_G0000385;gene_biotype=processed_pseudogene;gene_name=ACTG1P2;gene_sources=liftoff;ID=HG00642_ch_G0000385;Name=ACTG1P2
HG00642_chrY	CAT	transcript	18456633	18457757	1000	-	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG00642_ch_T0001166;gene_id=HG00642_ch_G0000385;Parent=HG00642_ch_G0000385;transcript_name=HG00642_ch_T0001166;gene_name=ACTG1P2;ID=HG00642_ch_T0001166;Name=ACTG1P2
HG00642_chrY	CAT	exon	18456633	18457757	.	-	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG00642_ch_T0001166;gene_id=HG00642_ch_G0000385;Parent=HG00642_ch_T0001166;transcript_name=HG00642_ch_T0001166;gene_name=ACTG1P2;ID=exon:HG00642_ch_T0001166:0;Name=ACTG1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18468612	18470192	.	-	.	source_gene_common_name=XKRY;source_gene=ENSG00000290724.1;gene_id=HG00642_ch_G0000386;gene_biotype=lncRNA;gene_name=XKRY;gene_sources=liftoff;ID=HG00642_ch_G0000386;Name=XKRY
HG00642_chrY	CAT	transcript	18468612	18470192	1000	-	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001167;gene_id=HG00642_ch_G0000386;Parent=HG00642_ch_G0000386;transcript_name=HG00642_ch_T0001167;gene_name=XKRY;ID=HG00642_ch_T0001167;Name=XKRY
HG00642_chrY	CAT	exon	18468612	18470192	.	-	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001167;gene_id=HG00642_ch_G0000386;Parent=HG00642_ch_T0001167;transcript_name=HG00642_ch_T0001167;gene_name=XKRY;ID=exon:HG00642_ch_T0001167:0;Name=XKRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18468748	18477032	.	-	.	source_gene_common_name=XKRY;source_gene=ENSG00000250868.5;gene_id=HG00642_ch_G0000387;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG00642_ch_G0000387;Name=XKRY
HG00642_chrY	CAT	transcript	18468748	18477032	1000	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001168;gene_id=HG00642_ch_G0000387;Parent=HG00642_ch_G0000387;transcript_name=HG00642_ch_T0001168;gene_name=XKRY;ID=HG00642_ch_T0001168;Name=XKRY
HG00642_chrY	CAT	exon	18468748	18469512	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001168;gene_id=HG00642_ch_G0000387;Parent=HG00642_ch_T0001168;transcript_name=HG00642_ch_T0001168;gene_name=XKRY;ID=exon:HG00642_ch_T0001168:0;Name=XKRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18469513	18476697	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001168;gene_id=HG00642_ch_G0000387;Parent=HG00642_ch_T0001168;transcript_name=HG00642_ch_T0001168;gene_name=XKRY;ID=intron:HG00642_ch_T0001168:0;Name=XKRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18476698	18477032	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00642_ch_T0001168;gene_id=HG00642_ch_G0000387;Parent=HG00642_ch_T0001168;transcript_name=HG00642_ch_T0001168;gene_name=XKRY;ID=exon:HG00642_ch_T0001168:1;Name=XKRY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18481842	18484447	.	+	.	source_gene_common_name=USP9YP23;source_gene=ENSG00000223555.1;alternative_source_transcripts=ENST00000455085.1;gene_id=HG00642_ch_G0000388;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP23;gene_sources=liftoff;ID=HG00642_ch_G0000388;Name=USP9YP23
HG00642_chrY	CAT	transcript	18481842	18484447	1000	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_G0000388;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=HG00642_ch_T0001169;Name=USP9YP23
HG00642_chrY	CAT	exon	18481842	18481967	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_T0001169;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=exon:HG00642_ch_T0001169:0;Name=USP9YP23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18481968	18482541	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_T0001169;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=intron:HG00642_ch_T0001169:0;Name=USP9YP23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18482542	18482633	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_T0001169;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=exon:HG00642_ch_T0001169:1;Name=USP9YP23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18482634	18484258	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_T0001169;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=intron:HG00642_ch_T0001169:1;Name=USP9YP23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18484259	18484447	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00642_ch_T0001169;gene_id=HG00642_ch_G0000388;Parent=HG00642_ch_T0001169;transcript_name=HG00642_ch_T0001169;gene_name=USP9YP23;ID=exon:HG00642_ch_T0001169:2;Name=USP9YP23;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18487947	18489116	.	-	.	source_gene_common_name=USP9YP27;source_gene=ENSG00000235521.1;gene_id=HG00642_ch_G0000389;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP27;gene_sources=liftoff;ID=HG00642_ch_G0000389;Name=USP9YP27
HG00642_chrY	CAT	transcript	18487947	18489116	1000	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_G0000389;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=HG00642_ch_T0001170;Name=USP9YP27
HG00642_chrY	CAT	exon	18487947	18488042	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=exon:HG00642_ch_T0001170:0;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18488043	18488422	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=intron:HG00642_ch_T0001170:0;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18488423	18488593	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=exon:HG00642_ch_T0001170:1;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18488594	18488793	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=intron:HG00642_ch_T0001170:1;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18488794	18488822	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=exon:HG00642_ch_T0001170:2;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18488823	18488974	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=intron:HG00642_ch_T0001170:2;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18488975	18489116	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00642_ch_T0001170;gene_id=HG00642_ch_G0000389;Parent=HG00642_ch_T0001170;transcript_name=HG00642_ch_T0001170;gene_name=USP9YP27;ID=exon:HG00642_ch_T0001170:3;Name=USP9YP27;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18488635	18488794	.	-	.	source_gene_common_name=RNU1-128P;source_gene=ENSG00000252513.1;gene_id=HG00642_ch_G0000390;gene_biotype=snRNA;gene_name=RNU1-128P;gene_sources=liftoff;ID=HG00642_ch_G0000390;Name=RNU1-128P
HG00642_chrY	CAT	transcript	18488635	18488794	1000	-	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG00642_ch_T0001171;gene_id=HG00642_ch_G0000390;Parent=HG00642_ch_G0000390;transcript_name=HG00642_ch_T0001171;gene_name=RNU1-128P;ID=HG00642_ch_T0001171;Name=RNU1-128P
HG00642_chrY	CAT	exon	18488635	18488794	.	-	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG00642_ch_T0001171;gene_id=HG00642_ch_G0000390;Parent=HG00642_ch_T0001171;transcript_name=HG00642_ch_T0001171;gene_name=RNU1-128P;ID=exon:HG00642_ch_T0001171:0;Name=RNU1-128P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18497615	18500328	.	-	.	source_gene_common_name=TRAPPC2P3;source_gene=ENSG00000224964.1;alternative_source_transcripts=ENST00000443200.1;gene_id=HG00642_ch_G0000391;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P3;gene_sources=liftoff;ID=HG00642_ch_G0000391;Name=TRAPPC2P3
HG00642_chrY	CAT	transcript	18497615	18500328	1000	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_G0000391;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=HG00642_ch_T0001172;Name=TRAPPC2P3
HG00642_chrY	CAT	exon	18497615	18497700	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_T0001172;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=exon:HG00642_ch_T0001172:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18497701	18498141	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_T0001172;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=intron:HG00642_ch_T0001172:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18498142	18498283	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_T0001172;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=exon:HG00642_ch_T0001172:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18498284	18500235	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_T0001172;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=intron:HG00642_ch_T0001172:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18500236	18500328	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00642_ch_T0001172;gene_id=HG00642_ch_G0000391;Parent=HG00642_ch_T0001172;transcript_name=HG00642_ch_T0001172;gene_name=TRAPPC2P3;ID=exon:HG00642_ch_T0001172:2;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18509439	18524962	.	+	.	source_gene_common_name=OFD1P1Y;source_gene=ENSG00000226011.1;gene_id=HG00642_ch_G0000392;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000392;Name=OFD1P1Y
HG00642_chrY	CAT	transcript	18509439	18524962	1000	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_G0000392;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=HG00642_ch_T0001173;Name=OFD1P1Y
HG00642_chrY	CAT	exon	18509439	18509538	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18509539	18510758	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18510759	18510959	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18510960	18513153	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18513154	18513221	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18513222	18513306	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18513307	18513337	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18513338	18514860	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18514861	18514997	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18514998	18515321	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18515322	18515468	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18515469	18518557	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18518558	18518663	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18518664	18519966	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18519967	18520086	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18520087	18521923	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18521924	18521997	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18521998	18523101	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18523102	18523193	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18523194	18524813	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=intron:HG00642_ch_T0001173:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18524814	18524962	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00642_ch_T0001173;gene_id=HG00642_ch_G0000392;Parent=HG00642_ch_T0001173;transcript_name=HG00642_ch_T0001173;gene_name=OFD1P1Y;ID=exon:HG00642_ch_T0001173:10;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18518068	18524960	.	+	.	source_gene_common_name=ENSG00000300757;source_gene=ENSG00000300757.1;gene_id=HG00642_ch_G0000393;gene_biotype=lncRNA;gene_name=ENSG00000300757;gene_sources=liftoff;ID=HG00642_ch_G0000393;Name=ENSG00000300757
HG00642_chrY	CAT	transcript	18518068	18520162	1000	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_G0000393;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=HG00642_ch_T0001174;Name=ENSG00000300757
HG00642_chrY	CAT	exon	18518068	18518151	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001174;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001174:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18518152	18518254	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001174;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001174:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18518255	18518395	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001174;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001174:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18518396	18519967	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001174;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001174:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18519968	18520162	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001174;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001174;transcript_name=HG00642_ch_T0001174;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001174:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18518276	18520159	1000	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001175;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_G0000393;transcript_name=HG00642_ch_T0001175;gene_name=ENSG00000300757;ID=HG00642_ch_T0001175;Name=ENSG00000300757
HG00642_chrY	CAT	exon	18518276	18518395	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001175;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001175;transcript_name=HG00642_ch_T0001175;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001175:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18518396	18519967	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001175;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001175;transcript_name=HG00642_ch_T0001175;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001175:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18519968	18520159	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001175;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001175;transcript_name=HG00642_ch_T0001175;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001175:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18519578	18524960	1000	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_G0000393;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=HG00642_ch_T0001176;Name=ENSG00000300757
HG00642_chrY	CAT	exon	18519578	18519695	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001176:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18519696	18519967	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001176:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18519968	18520111	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001176:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18520112	18521923	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001176:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18521924	18521997	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001176:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18521998	18524813	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001176:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18524814	18524960	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001176;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001176;transcript_name=HG00642_ch_T0001176;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001176:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18519583	18524853	1000	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_G0000393;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=HG00642_ch_T0001177;Name=ENSG00000300757
HG00642_chrY	CAT	exon	18519583	18519695	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001177:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18519696	18519967	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001177:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18519968	18520086	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001177:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18520087	18521480	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001177:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18521481	18521556	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001177:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18521557	18521923	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001177:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18521924	18521997	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001177:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18521998	18524813	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=intron:HG00642_ch_T0001177:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18524814	18524853	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00642_ch_T0001177;gene_id=HG00642_ch_G0000393;Parent=HG00642_ch_T0001177;transcript_name=HG00642_ch_T0001177;gene_name=ENSG00000300757;ID=exon:HG00642_ch_T0001177:4;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18536831	18537158	.	-	.	source_gene_common_name=ELOCP6;source_gene=ENSG00000225740.1;alternative_source_transcripts=ENST00000429066.1;gene_id=HG00642_ch_G0000394;gene_biotype=processed_pseudogene;gene_name=ELOCP6;gene_sources=liftoff;ID=HG00642_ch_G0000394;Name=ELOCP6
HG00642_chrY	CAT	transcript	18536831	18537158	1000	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG00642_ch_T0001178;gene_id=HG00642_ch_G0000394;Parent=HG00642_ch_G0000394;transcript_name=HG00642_ch_T0001178;gene_name=ELOCP6;ID=HG00642_ch_T0001178;Name=ELOCP6
HG00642_chrY	CAT	exon	18536831	18537158	.	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG00642_ch_T0001178;gene_id=HG00642_ch_G0000394;Parent=HG00642_ch_T0001178;transcript_name=HG00642_ch_T0001178;gene_name=ELOCP6;ID=exon:HG00642_ch_T0001178:0;Name=ELOCP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18577893	18579852	.	-	.	source_gene_common_name=CDY2A;source_gene=ENSG00000182415.11;alternative_source_transcripts=ENST00000250838.6;gene_id=HG00642_ch_G0000395;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff;ID=HG00642_ch_G0000395;Name=CDY2A
HG00642_chrY	CAT	transcript	18577893	18579852	100	-	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00642_ch_T0001179;gene_id=HG00642_ch_G0000395;Parent=HG00642_ch_G0000395;transcript_name=HG00642_ch_T0001179;gene_name=CDY2A;ID=HG00642_ch_T0001179;Name=CDY2A
HG00642_chrY	CAT	exon	18577893	18579852	.	-	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00642_ch_T0001179;gene_id=HG00642_ch_G0000395;Parent=HG00642_ch_T0001179;transcript_name=HG00642_ch_T0001179;gene_name=CDY2A;ID=exon:HG00642_ch_T0001179:0;Name=CDY2A;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	18577899	18579524	.	-	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00642_ch_T0001179;gene_id=HG00642_ch_G0000395;Parent=HG00642_ch_T0001179;transcript_name=HG00642_ch_T0001179;gene_name=CDY2A;ID=CDS:HG00642_ch_T0001179:0;Name=CDY2A;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	18577899	18577901	.	-	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00642_ch_T0001179;gene_id=HG00642_ch_G0000395;Parent=HG00642_ch_T0001179;transcript_name=HG00642_ch_T0001179;gene_name=CDY2A;ID=stop_codon:HG00642_ch_T0001179;Name=CDY2A;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	18579522	18579524	.	-	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00642_ch_T0001179;gene_id=HG00642_ch_G0000395;Parent=HG00642_ch_T0001179;transcript_name=HG00642_ch_T0001179;gene_name=CDY2A;ID=start_codon:HG00642_ch_T0001179;Name=CDY2A;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18581731	18583340	.	-	.	source_gene_common_name=CDY8P;source_gene=ENSG00000224033.1;gene_id=HG00642_ch_G0000396;gene_biotype=unprocessed_pseudogene;gene_name=CDY8P;gene_sources=liftoff;ID=HG00642_ch_G0000396;Name=CDY8P
HG00642_chrY	CAT	transcript	18581731	18583340	1000	-	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;transcript_id=HG00642_ch_T0001180;gene_id=HG00642_ch_G0000396;Parent=HG00642_ch_G0000396;transcript_name=HG00642_ch_T0001180;gene_name=CDY8P;ID=HG00642_ch_T0001180;Name=CDY8P
HG00642_chrY	CAT	exon	18581731	18582943	.	-	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;transcript_id=HG00642_ch_T0001180;gene_id=HG00642_ch_G0000396;Parent=HG00642_ch_T0001180;transcript_name=HG00642_ch_T0001180;gene_name=CDY8P;ID=exon:HG00642_ch_T0001180:0;Name=CDY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18582944	18583274	.	-	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;transcript_id=HG00642_ch_T0001180;gene_id=HG00642_ch_G0000396;Parent=HG00642_ch_T0001180;transcript_name=HG00642_ch_T0001180;gene_name=CDY8P;ID=intron:HG00642_ch_T0001180:0;Name=CDY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18583275	18583340	.	-	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;transcript_id=HG00642_ch_T0001180;gene_id=HG00642_ch_G0000396;Parent=HG00642_ch_T0001180;transcript_name=HG00642_ch_T0001180;gene_name=CDY8P;ID=exon:HG00642_ch_T0001180:1;Name=CDY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18608389	18610440	.	+	.	source_gene_common_name=USP9YP32;source_gene=ENSG00000237616.1;alternative_source_transcripts=ENST00000436723.1;gene_id=HG00642_ch_G0000397;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP32;gene_sources=liftoff;ID=HG00642_ch_G0000397;Name=USP9YP32
HG00642_chrY	CAT	transcript	18608389	18610440	1000	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00642_ch_T0001181;gene_id=HG00642_ch_G0000397;Parent=HG00642_ch_G0000397;transcript_name=HG00642_ch_T0001181;gene_name=USP9YP32;ID=HG00642_ch_T0001181;Name=USP9YP32
HG00642_chrY	CAT	exon	18608389	18608609	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00642_ch_T0001181;gene_id=HG00642_ch_G0000397;Parent=HG00642_ch_T0001181;transcript_name=HG00642_ch_T0001181;gene_name=USP9YP32;ID=exon:HG00642_ch_T0001181:0;Name=USP9YP32;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18608610	18610231	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00642_ch_T0001181;gene_id=HG00642_ch_G0000397;Parent=HG00642_ch_T0001181;transcript_name=HG00642_ch_T0001181;gene_name=USP9YP32;ID=intron:HG00642_ch_T0001181:0;Name=USP9YP32;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18610232	18610440	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00642_ch_T0001181;gene_id=HG00642_ch_G0000397;Parent=HG00642_ch_T0001181;transcript_name=HG00642_ch_T0001181;gene_name=USP9YP32;ID=exon:HG00642_ch_T0001181:1;Name=USP9YP32;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18612357	18621293	.	-	.	source_gene_common_name=USP9YP6;source_gene=ENSG00000226116.1;alternative_source_transcripts=ENST00000413550.1;gene_id=HG00642_ch_G0000398;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP6;gene_sources=liftoff;ID=HG00642_ch_G0000398;Name=USP9YP6
HG00642_chrY	CAT	transcript	18612357	18621293	1000	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_G0000398;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=HG00642_ch_T0001182;Name=USP9YP6
HG00642_chrY	CAT	exon	18612357	18612481	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=exon:HG00642_ch_T0001182:0;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18612482	18614615	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=intron:HG00642_ch_T0001182:0;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18614616	18614700	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=exon:HG00642_ch_T0001182:1;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18614701	18616686	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=intron:HG00642_ch_T0001182:1;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18616687	18616887	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=exon:HG00642_ch_T0001182:2;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18616888	18618687	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=intron:HG00642_ch_T0001182:2;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18618688	18618908	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=exon:HG00642_ch_T0001182:3;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18618909	18621071	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=intron:HG00642_ch_T0001182:3;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18621072	18621293	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00642_ch_T0001182;gene_id=HG00642_ch_G0000398;Parent=HG00642_ch_T0001182;transcript_name=HG00642_ch_T0001182;gene_name=USP9YP6;ID=exon:HG00642_ch_T0001182:4;Name=USP9YP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18652139	18654050	.	-	.	source_gene_common_name=CDY7P;source_gene=ENSG00000237558.1;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;gene_id=HG00642_ch_G0000399;gene_biotype=unprocessed_pseudogene;gene_name=CDY7P;gene_sources=liftoff;ID=HG00642_ch_G0000399;Name=CDY7P
HG00642_chrY	CAT	transcript	18652139	18654050	1000	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00642_ch_T0001183;gene_id=HG00642_ch_G0000399;Parent=HG00642_ch_G0000399;transcript_name=HG00642_ch_T0001183;gene_name=CDY7P;ID=HG00642_ch_T0001183;Name=CDY7P
HG00642_chrY	CAT	exon	18652139	18653577	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00642_ch_T0001183;gene_id=HG00642_ch_G0000399;Parent=HG00642_ch_T0001183;transcript_name=HG00642_ch_T0001183;gene_name=CDY7P;ID=exon:HG00642_ch_T0001183:0;Name=CDY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18653578	18653885	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00642_ch_T0001183;gene_id=HG00642_ch_G0000399;Parent=HG00642_ch_T0001183;transcript_name=HG00642_ch_T0001183;gene_name=CDY7P;ID=intron:HG00642_ch_T0001183:0;Name=CDY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18653886	18654050	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00642_ch_T0001183;gene_id=HG00642_ch_G0000399;Parent=HG00642_ch_T0001183;transcript_name=HG00642_ch_T0001183;gene_name=CDY7P;ID=exon:HG00642_ch_T0001183:1;Name=CDY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18683996	18692908	.	+	.	source_gene_common_name=USP9YP34;source_gene=ENSG00000233378.1;alternative_source_transcripts=ENST00000453983.1;gene_id=HG00642_ch_G0000400;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP34;gene_sources=liftoff;ID=HG00642_ch_G0000400;Name=USP9YP34
HG00642_chrY	CAT	transcript	18683996	18692908	1000	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_G0000400;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=HG00642_ch_T0001184;Name=USP9YP34
HG00642_chrY	CAT	exon	18683996	18684216	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=exon:HG00642_ch_T0001184:0;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18684217	18686383	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=intron:HG00642_ch_T0001184:0;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18686384	18686602	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=exon:HG00642_ch_T0001184:1;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18686603	18688402	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=intron:HG00642_ch_T0001184:1;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18688403	18688592	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=exon:HG00642_ch_T0001184:2;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18688593	18690587	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=intron:HG00642_ch_T0001184:2;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18690588	18690672	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=exon:HG00642_ch_T0001184:3;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18690673	18692815	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=intron:HG00642_ch_T0001184:3;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18692816	18692908	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG00642_ch_T0001184;gene_id=HG00642_ch_G0000400;Parent=HG00642_ch_T0001184;transcript_name=HG00642_ch_T0001184;gene_name=USP9YP34;ID=exon:HG00642_ch_T0001184:4;Name=USP9YP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18694825	18696873	.	-	.	source_gene_common_name=USP9YP7;source_gene=ENSG00000224485.1;alternative_source_transcripts=ENST00000452432.1;gene_id=HG00642_ch_G0000401;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP7;gene_sources=liftoff;ID=HG00642_ch_G0000401;Name=USP9YP7
HG00642_chrY	CAT	transcript	18694825	18696873	1000	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG00642_ch_T0001185;gene_id=HG00642_ch_G0000401;Parent=HG00642_ch_G0000401;transcript_name=HG00642_ch_T0001185;gene_name=USP9YP7;ID=HG00642_ch_T0001185;Name=USP9YP7
HG00642_chrY	CAT	exon	18694825	18695033	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG00642_ch_T0001185;gene_id=HG00642_ch_G0000401;Parent=HG00642_ch_T0001185;transcript_name=HG00642_ch_T0001185;gene_name=USP9YP7;ID=exon:HG00642_ch_T0001185:0;Name=USP9YP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18695034	18696652	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG00642_ch_T0001185;gene_id=HG00642_ch_G0000401;Parent=HG00642_ch_T0001185;transcript_name=HG00642_ch_T0001185;gene_name=USP9YP7;ID=intron:HG00642_ch_T0001185:0;Name=USP9YP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18696653	18696873	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG00642_ch_T0001185;gene_id=HG00642_ch_G0000401;Parent=HG00642_ch_T0001185;transcript_name=HG00642_ch_T0001185;gene_name=USP9YP7;ID=exon:HG00642_ch_T0001185:1;Name=USP9YP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18721919	18723528	.	+	.	source_gene_common_name=CDY6P;source_gene=ENSG00000229138.1;gene_id=HG00642_ch_G0000402;gene_biotype=unprocessed_pseudogene;gene_name=CDY6P;gene_sources=liftoff;ID=HG00642_ch_G0000402;Name=CDY6P
HG00642_chrY	CAT	transcript	18721919	18723528	1000	+	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;transcript_id=HG00642_ch_T0001186;gene_id=HG00642_ch_G0000402;Parent=HG00642_ch_G0000402;transcript_name=HG00642_ch_T0001186;gene_name=CDY6P;ID=HG00642_ch_T0001186;Name=CDY6P
HG00642_chrY	CAT	exon	18721919	18721984	.	+	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;transcript_id=HG00642_ch_T0001186;gene_id=HG00642_ch_G0000402;Parent=HG00642_ch_T0001186;transcript_name=HG00642_ch_T0001186;gene_name=CDY6P;ID=exon:HG00642_ch_T0001186:0;Name=CDY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18721985	18722328	.	+	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;transcript_id=HG00642_ch_T0001186;gene_id=HG00642_ch_G0000402;Parent=HG00642_ch_T0001186;transcript_name=HG00642_ch_T0001186;gene_name=CDY6P;ID=intron:HG00642_ch_T0001186:0;Name=CDY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18722329	18723528	.	+	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;transcript_id=HG00642_ch_T0001186;gene_id=HG00642_ch_G0000402;Parent=HG00642_ch_T0001186;transcript_name=HG00642_ch_T0001186;gene_name=CDY6P;ID=exon:HG00642_ch_T0001186:1;Name=CDY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18725407	18727367	.	+	.	source_gene_common_name=CDY2B;source_gene=ENSG00000129873.8;alternative_source_transcripts=ENST00000382867.4;gene_id=HG00642_ch_G0000403;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff;ID=HG00642_ch_G0000403;Name=CDY2B
HG00642_chrY	CAT	transcript	18725407	18727367	100	+	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00642_ch_T0001187;gene_id=HG00642_ch_G0000403;Parent=HG00642_ch_G0000403;transcript_name=HG00642_ch_T0001187;gene_name=CDY2B;ID=HG00642_ch_T0001187;Name=CDY2B
HG00642_chrY	CAT	exon	18725407	18727367	.	+	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00642_ch_T0001187;gene_id=HG00642_ch_G0000403;Parent=HG00642_ch_T0001187;transcript_name=HG00642_ch_T0001187;gene_name=CDY2B;ID=exon:HG00642_ch_T0001187:0;Name=CDY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	18725735	18727360	.	+	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00642_ch_T0001187;gene_id=HG00642_ch_G0000403;Parent=HG00642_ch_T0001187;transcript_name=HG00642_ch_T0001187;gene_name=CDY2B;ID=CDS:HG00642_ch_T0001187:0;Name=CDY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	18725735	18725737	.	+	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00642_ch_T0001187;gene_id=HG00642_ch_G0000403;Parent=HG00642_ch_T0001187;transcript_name=HG00642_ch_T0001187;gene_name=CDY2B;ID=start_codon:HG00642_ch_T0001187;Name=CDY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	18727358	18727360	.	+	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00642_ch_T0001187;gene_id=HG00642_ch_G0000403;Parent=HG00642_ch_T0001187;transcript_name=HG00642_ch_T0001187;gene_name=CDY2B;ID=stop_codon:HG00642_ch_T0001187;Name=CDY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18756383	18787731	.	-	.	source_gene_common_name=ENSG00000297434;source_gene=ENSG00000297434.1;alternative_source_transcripts=ENST00000747888.1;gene_id=HG00642_ch_G0000404;gene_biotype=lncRNA;gene_name=ENSG00000297434;gene_sources=liftoff;ID=HG00642_ch_G0000404;Name=ENSG00000297434
HG00642_chrY	CAT	transcript	18756383	18787731	1000	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=HG00642_ch_T0001188;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18756383	18756501	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18756502	18759961	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18759962	18760217	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18760218	18773125	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18773126	18773338	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18773339	18778783	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18778784	18778922	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780234	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780235	18780432	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18783247	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785169	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785170	18785277	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786849	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786850	18786984	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18786985	18787698	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001188:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18787699	18787731	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747888.1;transcript_id=HG00642_ch_T0001188;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001188;transcript_name=HG00642_ch_T0001188;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001188:8;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18778860	18787623	1000	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=HG00642_ch_T0001190;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18778860	18778922	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780230	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001190:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780231	18780432	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18783247	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001190:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785169	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001190:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785170	18785277	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786849	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001190:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786850	18786984	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18786985	18787293	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001190:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18787294	18787623	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747889.1;transcript_id=HG00642_ch_T0001190;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001190;transcript_name=HG00642_ch_T0001190;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001190:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18778860	18785667	1000	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=HG00642_ch_T0001191;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18778860	18778922	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001191:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780230	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001191:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780231	18780432	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001191:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18783247	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001191:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001191:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785169	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001191:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785170	18785277	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001191:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18785549	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001191:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785550	18785667	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747891.1;transcript_id=HG00642_ch_T0001191;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001191;transcript_name=HG00642_ch_T0001191;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001191:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18778861	18787166	1000	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=HG00642_ch_T0001192;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18778861	18778922	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001192:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780234	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001192:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780235	18780432	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001192:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18783247	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001192:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001192:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785158	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001192:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785159	18785277	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001192:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786849	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001192:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786850	18787166	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747890.1;transcript_id=HG00642_ch_T0001192;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001192;transcript_name=HG00642_ch_T0001192;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001192:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18778862	18785662	1000	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=HG00642_ch_T0001193;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18778862	18778922	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001193:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780230	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001193:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780231	18780432	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001193:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18783247	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001193:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001193:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785158	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001193:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785159	18785277	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001193:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18785549	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001193:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785550	18785662	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747892.1;transcript_id=HG00642_ch_T0001193;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001193;transcript_name=HG00642_ch_T0001193;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001193:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18778863	18785662	1000	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=HG00642_ch_T0001194;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18778863	18778922	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18778923	18780230	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001194:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18780231	18780432	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18782075	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001194:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18782076	18782143	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18782144	18783247	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001194:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785169	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001194:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785170	18785277	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18785549	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001194:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785550	18785662	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747893.1;transcript_id=HG00642_ch_T0001194;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001194;transcript_name=HG00642_ch_T0001194;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001194:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18785083	18787176	1000	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=HG00642_ch_T0001196;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18785083	18785277	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001196;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001196:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786849	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001196;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001196:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786850	18786990	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001196;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001196:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18786991	18787092	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001196;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001196:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18787093	18787176	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00642_ch_T0001196;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001196;transcript_name=HG00642_ch_T0001196;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001196:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18785086	18786969	1000	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747895.1;transcript_id=HG00642_ch_T0001197;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_G0000404;transcript_name=HG00642_ch_T0001197;gene_name=ENSG00000297434;ID=HG00642_ch_T0001197;Name=ENSG00000297434
HG00642_chrY	CAT	exon	18785086	18785277	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747895.1;transcript_id=HG00642_ch_T0001197;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001197;transcript_name=HG00642_ch_T0001197;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001197:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786849	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747895.1;transcript_id=HG00642_ch_T0001197;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001197;transcript_name=HG00642_ch_T0001197;gene_name=ENSG00000297434;ID=intron:HG00642_ch_T0001197:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786850	18786969	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;alternative_source_transcripts=ENST00000747895.1;transcript_id=HG00642_ch_T0001197;gene_id=HG00642_ch_G0000404;Parent=HG00642_ch_T0001197;transcript_name=HG00642_ch_T0001197;gene_name=ENSG00000297434;ID=exon:HG00642_ch_T0001197:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18768102	18768429	.	+	.	source_gene_common_name=ELOCP12;source_gene=ENSG00000230412.1;alternative_source_transcripts=ENST00000458706.1;gene_id=HG00642_ch_G0000405;gene_biotype=processed_pseudogene;gene_name=ELOCP12;gene_sources=liftoff;ID=HG00642_ch_G0000405;Name=ELOCP12
HG00642_chrY	CAT	transcript	18768102	18768429	1000	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1;transcript_id=HG00642_ch_T0001189;gene_id=HG00642_ch_G0000405;Parent=HG00642_ch_G0000405;transcript_name=HG00642_ch_T0001189;gene_name=ELOCP12;ID=HG00642_ch_T0001189;Name=ELOCP12
HG00642_chrY	CAT	exon	18768102	18768429	.	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1;transcript_id=HG00642_ch_T0001189;gene_id=HG00642_ch_G0000405;Parent=HG00642_ch_T0001189;transcript_name=HG00642_ch_T0001189;gene_name=ELOCP12;ID=exon:HG00642_ch_T0001189:0;Name=ELOCP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18780284	18795804	.	-	.	source_gene_common_name=OFD1P2Y;source_gene=ENSG00000226611.2;gene_id=HG00642_ch_G0000406;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P2Y;gene_sources=liftoff;ID=HG00642_ch_G0000406;Name=OFD1P2Y
HG00642_chrY	CAT	transcript	18780284	18795804	1000	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_G0000406;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=HG00642_ch_T0001195;Name=OFD1P2Y
HG00642_chrY	CAT	exon	18780284	18780432	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18780433	18782075	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18782076	18782143	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18782144	18783247	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18783248	18783321	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18783322	18785158	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18785159	18785277	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18785278	18786581	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18786582	18786687	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18786688	18789775	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18789776	18789922	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18789923	18790246	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18790247	18790383	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18790384	18791906	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18791907	18791937	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18791938	18792022	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18792023	18792090	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18792091	18794284	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18794285	18794485	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18794486	18795706	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=intron:HG00642_ch_T0001195:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18795707	18795804	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00642_ch_T0001195;gene_id=HG00642_ch_G0000406;Parent=HG00642_ch_T0001195;transcript_name=HG00642_ch_T0001195;gene_name=OFD1P2Y;ID=exon:HG00642_ch_T0001195:10;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18804916	18807704	.	+	.	source_gene_common_name=TRAPPC2P8;source_gene=ENSG00000225895.1;alternative_source_transcripts=ENST00000440676.1;gene_id=HG00642_ch_G0000407;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P8;gene_sources=liftoff;ID=HG00642_ch_G0000407;Name=TRAPPC2P8
HG00642_chrY	CAT	transcript	18804916	18807704	1000	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_G0000407;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=HG00642_ch_T0001198;Name=TRAPPC2P8
HG00642_chrY	CAT	exon	18804916	18805008	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_T0001198;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=exon:HG00642_ch_T0001198:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18805009	18806957	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_T0001198;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=intron:HG00642_ch_T0001198:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18806958	18807104	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_T0001198;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=exon:HG00642_ch_T0001198:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18807105	18807548	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_T0001198;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=intron:HG00642_ch_T0001198:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18807549	18807704	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1;transcript_id=HG00642_ch_T0001198;gene_id=HG00642_ch_G0000407;Parent=HG00642_ch_T0001198;transcript_name=HG00642_ch_T0001198;gene_name=TRAPPC2P8;ID=exon:HG00642_ch_T0001198:2;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18816129	18817297	.	+	.	source_gene_common_name=USP9YP15;source_gene=ENSG00000233120.1;gene_id=HG00642_ch_G0000408;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP15;gene_sources=liftoff;ID=HG00642_ch_G0000408;Name=USP9YP15
HG00642_chrY	CAT	transcript	18816129	18817297	1000	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_G0000408;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=HG00642_ch_T0001199;Name=USP9YP15
HG00642_chrY	CAT	exon	18816129	18816266	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=exon:HG00642_ch_T0001199:0;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18816267	18816421	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=intron:HG00642_ch_T0001199:0;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18816422	18816450	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=exon:HG00642_ch_T0001199:1;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18816451	18816662	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=intron:HG00642_ch_T0001199:1;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18816663	18816821	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=exon:HG00642_ch_T0001199:2;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18816822	18817201	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=intron:HG00642_ch_T0001199:2;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18817202	18817297	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00642_ch_T0001199;gene_id=HG00642_ch_G0000408;Parent=HG00642_ch_T0001199;transcript_name=HG00642_ch_T0001199;gene_name=USP9YP15;ID=exon:HG00642_ch_T0001199:3;Name=USP9YP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18816450	18816609	.	+	.	source_gene_common_name=RNU1-95P;source_gene=ENSG00000252166.1;gene_id=HG00642_ch_G0000409;gene_biotype=snRNA;gene_name=RNU1-95P;gene_sources=liftoff;ID=HG00642_ch_G0000409;Name=RNU1-95P
HG00642_chrY	CAT	transcript	18816450	18816609	1000	+	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG00642_ch_T0001200;gene_id=HG00642_ch_G0000409;Parent=HG00642_ch_G0000409;transcript_name=HG00642_ch_T0001200;gene_name=RNU1-95P;ID=HG00642_ch_T0001200;Name=RNU1-95P
HG00642_chrY	CAT	exon	18816450	18816609	.	+	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG00642_ch_T0001200;gene_id=HG00642_ch_G0000409;Parent=HG00642_ch_T0001200;transcript_name=HG00642_ch_T0001200;gene_name=RNU1-95P;ID=exon:HG00642_ch_T0001200:0;Name=RNU1-95P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18820801	18823405	.	-	.	source_gene_common_name=USP9YP16;source_gene=ENSG00000232744.1;alternative_source_transcripts=ENST00000430287.1;gene_id=HG00642_ch_G0000410;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP16;gene_sources=liftoff;ID=HG00642_ch_G0000410;Name=USP9YP16
HG00642_chrY	CAT	transcript	18820801	18823405	1000	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_G0000410;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=HG00642_ch_T0001201;Name=USP9YP16
HG00642_chrY	CAT	exon	18820801	18820989	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_T0001201;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=exon:HG00642_ch_T0001201:0;Name=USP9YP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18820990	18822614	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_T0001201;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=intron:HG00642_ch_T0001201:0;Name=USP9YP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18822615	18822706	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_T0001201;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=exon:HG00642_ch_T0001201:1;Name=USP9YP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18822707	18823279	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_T0001201;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=intron:HG00642_ch_T0001201:1;Name=USP9YP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18823280	18823405	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00642_ch_T0001201;gene_id=HG00642_ch_G0000410;Parent=HG00642_ch_T0001201;transcript_name=HG00642_ch_T0001201;gene_name=USP9YP16;ID=exon:HG00642_ch_T0001201:2;Name=USP9YP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18828216	18836493	.	+	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000244646.5;gene_id=HG00642_ch_G0000411;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRYP7;gene_sources=liftoff;ID=HG00642_ch_G0000411;Name=XKRYP7
HG00642_chrY	CAT	transcript	18828216	18836493	1000	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001202;gene_id=HG00642_ch_G0000411;Parent=HG00642_ch_G0000411;transcript_name=HG00642_ch_T0001202;gene_name=XKRYP7;ID=HG00642_ch_T0001202;Name=XKRYP7
HG00642_chrY	CAT	exon	18828216	18828550	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001202;gene_id=HG00642_ch_G0000411;Parent=HG00642_ch_T0001202;transcript_name=HG00642_ch_T0001202;gene_name=XKRYP7;ID=exon:HG00642_ch_T0001202:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18828551	18835735	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001202;gene_id=HG00642_ch_G0000411;Parent=HG00642_ch_T0001202;transcript_name=HG00642_ch_T0001202;gene_name=XKRYP7;ID=intron:HG00642_ch_T0001202:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18835736	18836493	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001202;gene_id=HG00642_ch_G0000411;Parent=HG00642_ch_T0001202;transcript_name=HG00642_ch_T0001202;gene_name=XKRYP7;ID=exon:HG00642_ch_T0001202:1;Name=XKRYP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18835056	18836636	.	+	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000290725.1;gene_id=HG00642_ch_G0000412;gene_biotype=lncRNA;gene_name=XKRYP7;gene_sources=liftoff;ID=HG00642_ch_G0000412;Name=XKRYP7
HG00642_chrY	CAT	transcript	18835056	18836636	1000	+	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001203;gene_id=HG00642_ch_G0000412;Parent=HG00642_ch_G0000412;transcript_name=HG00642_ch_T0001203;gene_name=XKRYP7;ID=HG00642_ch_T0001203;Name=XKRYP7
HG00642_chrY	CAT	exon	18835056	18836636	.	+	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00642_ch_T0001203;gene_id=HG00642_ch_G0000412;Parent=HG00642_ch_T0001203;transcript_name=HG00642_ch_T0001203;gene_name=XKRYP7;ID=exon:HG00642_ch_T0001203:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18847491	18848615	.	+	.	source_gene_common_name=ACTG1P11;source_gene=ENSG00000229465.1;alternative_source_transcripts=ENST00000425411.1;gene_id=HG00642_ch_G0000413;gene_biotype=processed_pseudogene;gene_name=ACTG1P11;gene_sources=liftoff;ID=HG00642_ch_G0000413;Name=ACTG1P11
HG00642_chrY	CAT	transcript	18847491	18848615	1000	+	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000425411.1;transcript_id=HG00642_ch_T0001204;gene_id=HG00642_ch_G0000413;Parent=HG00642_ch_G0000413;transcript_name=HG00642_ch_T0001204;gene_name=ACTG1P11;ID=HG00642_ch_T0001204;Name=ACTG1P11
HG00642_chrY	CAT	exon	18847491	18848615	.	+	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000425411.1;transcript_id=HG00642_ch_T0001204;gene_id=HG00642_ch_G0000413;Parent=HG00642_ch_T0001204;transcript_name=HG00642_ch_T0001204;gene_name=ACTG1P11;ID=exon:HG00642_ch_T0001204:0;Name=ACTG1P11;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18875853	18902550	.	+	.	source_gene_common_name=ENSG00000310304;source_gene=ENSG00000310304.1;alternative_source_transcripts=ENST00000848900.1;gene_id=HG00642_ch_G0000414;gene_biotype=lncRNA;gene_name=ENSG00000310304;gene_sources=liftoff;ID=HG00642_ch_G0000414;Name=ENSG00000310304
HG00642_chrY	CAT	transcript	18875853	18888034	1000	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00642_ch_T0001205;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001205;gene_name=ENSG00000310304;ID=HG00642_ch_T0001205;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875853	18876294	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00642_ch_T0001205;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001205;transcript_name=HG00642_ch_T0001205;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001205:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18886737	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00642_ch_T0001205;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001205;transcript_name=HG00642_ch_T0001205;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001205:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886738	18888034	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00642_ch_T0001205;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001205;transcript_name=HG00642_ch_T0001205;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001205:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875911	18891594	1000	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=HG00642_ch_T0001206;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875911	18876294	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001206;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001206:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18886737	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001206;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001206:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886738	18886862	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001206;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001206:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18886863	18890550	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001206;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001206:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18890551	18891594	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00642_ch_T0001206;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001206;transcript_name=HG00642_ch_T0001206;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001206:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875936	18891586	1000	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=HG00642_ch_T0001207;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875936	18876225	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001207;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001207:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876226	18886737	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001207;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001207:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886738	18886862	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001207;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001207:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18886863	18890550	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001207;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001207:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18890551	18891586	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00642_ch_T0001207;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001207;transcript_name=HG00642_ch_T0001207;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001207:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875936	18891586	1000	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=HG00642_ch_T0001208;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875936	18876294	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001208;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001208:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18886741	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001208;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001208:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886742	18886862	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001208;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001208:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18886863	18890550	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001208;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001208:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18890551	18891586	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00642_ch_T0001208;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001208;transcript_name=HG00642_ch_T0001208;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001208:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875938	18891591	1000	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00642_ch_T0001209;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001209;gene_name=ENSG00000310304;ID=HG00642_ch_T0001209;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875938	18876294	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00642_ch_T0001209;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001209;transcript_name=HG00642_ch_T0001209;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001209:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18890550	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00642_ch_T0001209;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001209;transcript_name=HG00642_ch_T0001209;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001209:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18890551	18891591	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00642_ch_T0001209;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001209;transcript_name=HG00642_ch_T0001209;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001209:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875939	18878445	1000	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00642_ch_T0001210;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001210;gene_name=ENSG00000310304;ID=HG00642_ch_T0001210;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875939	18876294	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00642_ch_T0001210;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001210;transcript_name=HG00642_ch_T0001210;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001210:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18877882	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00642_ch_T0001210;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001210;transcript_name=HG00642_ch_T0001210;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001210:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18877883	18878445	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00642_ch_T0001210;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001210;transcript_name=HG00642_ch_T0001210;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001210:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875942	18888034	1000	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00642_ch_T0001211;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001211;gene_name=ENSG00000310304;ID=HG00642_ch_T0001211;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875942	18876225	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00642_ch_T0001211;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001211;transcript_name=HG00642_ch_T0001211;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001211:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876226	18886737	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00642_ch_T0001211;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001211;transcript_name=HG00642_ch_T0001211;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001211:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886738	18888034	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00642_ch_T0001211;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001211;transcript_name=HG00642_ch_T0001211;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001211:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875947	18886898	1000	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00642_ch_T0001212;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001212;gene_name=ENSG00000310304;ID=HG00642_ch_T0001212;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875947	18876294	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00642_ch_T0001212;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001212;transcript_name=HG00642_ch_T0001212;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001212:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18886741	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00642_ch_T0001212;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001212;transcript_name=HG00642_ch_T0001212;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001212:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18886742	18886898	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00642_ch_T0001212;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001212;transcript_name=HG00642_ch_T0001212;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001212:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875978	18902550	1000	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=HG00642_ch_T0001213;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875978	18876294	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001213:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18899430	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001213:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18899431	18899649	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001213:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18899650	18900541	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001213:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18900542	18900666	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001213:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18900667	18902259	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001213:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18902260	18902550	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00642_ch_T0001213;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001213;transcript_name=HG00642_ch_T0001213;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001213:3;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875978	18891060	1000	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00642_ch_T0001214;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001214;gene_name=ENSG00000310304;ID=HG00642_ch_T0001214;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875978	18876225	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00642_ch_T0001214;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001214;transcript_name=HG00642_ch_T0001214;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001214:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876226	18890550	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00642_ch_T0001214;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001214;transcript_name=HG00642_ch_T0001214;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001214:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18890551	18891060	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00642_ch_T0001214;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001214;transcript_name=HG00642_ch_T0001214;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001214:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18875988	18881876	1000	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00642_ch_T0001215;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_G0000414;transcript_name=HG00642_ch_T0001215;gene_name=ENSG00000310304;ID=HG00642_ch_T0001215;Name=ENSG00000310304
HG00642_chrY	CAT	exon	18875988	18876294	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00642_ch_T0001215;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001215;transcript_name=HG00642_ch_T0001215;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001215:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18876295	18881242	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00642_ch_T0001215;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001215;transcript_name=HG00642_ch_T0001215;gene_name=ENSG00000310304;ID=intron:HG00642_ch_T0001215:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18881243	18881876	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00642_ch_T0001215;gene_id=HG00642_ch_G0000414;Parent=HG00642_ch_T0001215;transcript_name=HG00642_ch_T0001215;gene_name=ENSG00000310304;ID=exon:HG00642_ch_T0001215:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18878529	18878857	.	-	.	source_gene_common_name=ELOCP26;source_gene=ENSG00000236599.1;alternative_source_transcripts=ENST00000436067.1;gene_id=HG00642_ch_G0000415;gene_biotype=processed_pseudogene;gene_name=ELOCP26;gene_sources=liftoff;ID=HG00642_ch_G0000415;Name=ELOCP26
HG00642_chrY	CAT	transcript	18878529	18878857	1000	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG00642_ch_T0001216;gene_id=HG00642_ch_G0000415;Parent=HG00642_ch_G0000415;transcript_name=HG00642_ch_T0001216;gene_name=ELOCP26;ID=HG00642_ch_T0001216;Name=ELOCP26
HG00642_chrY	CAT	exon	18878529	18878857	.	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG00642_ch_T0001216;gene_id=HG00642_ch_G0000415;Parent=HG00642_ch_T0001216;transcript_name=HG00642_ch_T0001216;gene_name=ELOCP26;ID=exon:HG00642_ch_T0001216:0;Name=ELOCP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18882432	18884011	.	-	.	source_gene_common_name=CDY9P;source_gene=ENSG00000232899.1;alternative_source_transcripts=ENST00000451397.1;gene_id=HG00642_ch_G0000416;gene_biotype=unprocessed_pseudogene;gene_name=CDY9P;gene_sources=liftoff;ID=HG00642_ch_G0000416;Name=CDY9P
HG00642_chrY	CAT	transcript	18882432	18884011	1000	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG00642_ch_T0001217;gene_id=HG00642_ch_G0000416;Parent=HG00642_ch_G0000416;transcript_name=HG00642_ch_T0001217;gene_name=CDY9P;ID=HG00642_ch_T0001217;Name=CDY9P
HG00642_chrY	CAT	exon	18882432	18884011	.	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG00642_ch_T0001217;gene_id=HG00642_ch_G0000416;Parent=HG00642_ch_T0001217;transcript_name=HG00642_ch_T0001217;gene_name=CDY9P;ID=exon:HG00642_ch_T0001217:0;Name=CDY9P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18976206	18977095	.	-	.	source_gene_common_name=TAF9P2;source_gene=ENSG00000229302.1;alternative_source_transcripts=ENST00000454958.1;gene_id=HG00642_ch_G0000417;gene_biotype=processed_pseudogene;gene_name=TAF9P2;gene_sources=liftoff;ID=HG00642_ch_G0000417;Name=TAF9P2
HG00642_chrY	CAT	transcript	18976206	18977095	1000	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG00642_ch_T0001218;gene_id=HG00642_ch_G0000417;Parent=HG00642_ch_G0000417;transcript_name=HG00642_ch_T0001218;gene_name=TAF9P2;ID=HG00642_ch_T0001218;Name=TAF9P2
HG00642_chrY	CAT	exon	18976206	18976247	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG00642_ch_T0001218;gene_id=HG00642_ch_G0000417;Parent=HG00642_ch_T0001218;transcript_name=HG00642_ch_T0001218;gene_name=TAF9P2;ID=exon:HG00642_ch_T0001218:0;Name=TAF9P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18976248	18976622	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG00642_ch_T0001218;gene_id=HG00642_ch_G0000417;Parent=HG00642_ch_T0001218;transcript_name=HG00642_ch_T0001218;gene_name=TAF9P2;ID=intron:HG00642_ch_T0001218:0;Name=TAF9P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18976623	18977095	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG00642_ch_T0001218;gene_id=HG00642_ch_G0000417;Parent=HG00642_ch_T0001218;transcript_name=HG00642_ch_T0001218;gene_name=TAF9P2;ID=exon:HG00642_ch_T0001218:1;Name=TAF9P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	18979781	18984364	.	+	.	source_gene_common_name=CLUHP2;source_gene=ENSG00000228945.3;gene_id=HG00642_ch_G0000418;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP2;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000418;Name=CLUHP2
HG00642_chrY	CAT	transcript	18979781	18984364	1000	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_G0000418;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=HG00642_ch_T0001219;Name=CLUHP2
HG00642_chrY	CAT	exon	18979781	18979952	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18979953	18980848	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18980849	18981511	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18981512	18981640	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18981641	18981748	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18981749	18982392	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18982393	18982464	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18982465	18982714	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18982715	18982768	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18982769	18983494	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18983495	18983593	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18983594	18984073	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001219:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18984074	18984364	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001219;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001219;transcript_name=HG00642_ch_T0001219;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001219:6;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	18979781	18984364	1000	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_G0000418;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=HG00642_ch_T0001220;Name=CLUHP2
HG00642_chrY	CAT	exon	18979781	18979952	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18979953	18980848	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18980849	18981288	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18981289	18981365	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18981366	18981511	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18981512	18981640	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18981641	18981748	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18981749	18982392	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18982393	18982464	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18982465	18982714	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18982715	18982768	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18982769	18983494	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18983495	18983593	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:6;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18983594	18984073	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:6;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18984074	18984157	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:7;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	18984158	18984236	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=intron:HG00642_ch_T0001220:7;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	18984237	18984364	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00642_ch_T0001220;gene_id=HG00642_ch_G0000418;Parent=HG00642_ch_T0001220;transcript_name=HG00642_ch_T0001220;gene_name=CLUHP2;ID=exon:HG00642_ch_T0001220:8;Name=CLUHP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19025651	19052322	.	+	.	source_gene_common_name=FAM224A;source_gene=ENSG00000233522.2;alternative_source_transcripts=ENST00000776205.1;gene_id=HG00642_ch_G0000419;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG00642_ch_G0000419;Name=FAM224A
HG00642_chrY	CAT	transcript	19025651	19030489	1000	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=HG00642_ch_T0001221;Name=FAM224A
HG00642_chrY	CAT	exon	19025651	19025945	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=exon:HG00642_ch_T0001221:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=intron:HG00642_ch_T0001221:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=exon:HG00642_ch_T0001221:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=intron:HG00642_ch_T0001221:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=exon:HG00642_ch_T0001221:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=intron:HG00642_ch_T0001221:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030489	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG00642_ch_T0001221;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001221;transcript_name=HG00642_ch_T0001221;gene_name=FAM224A;ID=exon:HG00642_ch_T0001221:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025734	19030459	1000	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=HG00642_ch_T0001222;Name=FAM224A
HG00642_chrY	CAT	exon	19025734	19025945	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=exon:HG00642_ch_T0001222:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026061	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=intron:HG00642_ch_T0001222:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026062	19026295	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=exon:HG00642_ch_T0001222:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=intron:HG00642_ch_T0001222:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=exon:HG00642_ch_T0001222:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=intron:HG00642_ch_T0001222:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030459	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG00642_ch_T0001222;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001222;transcript_name=HG00642_ch_T0001222;gene_name=FAM224A;ID=exon:HG00642_ch_T0001222:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025746	19052333	1000	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=HG00642_ch_T0001223;Name=FAM224A
HG00642_chrY	CAT	exon	19025746	19026295	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=exon:HG00642_ch_T0001223:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=intron:HG00642_ch_T0001223:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=exon:HG00642_ch_T0001223:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19051489	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=intron:HG00642_ch_T0001223:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=exon:HG00642_ch_T0001223:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=intron:HG00642_ch_T0001223:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052333	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG00642_ch_T0001223;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001223;transcript_name=HG00642_ch_T0001223;gene_name=FAM224A;ID=exon:HG00642_ch_T0001223:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025746	19030488	1000	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=HG00642_ch_T0001224;Name=FAM224A
HG00642_chrY	CAT	exon	19025746	19026295	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001224;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=exon:HG00642_ch_T0001224:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001224;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=intron:HG00642_ch_T0001224:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001224;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=exon:HG00642_ch_T0001224:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001224;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=intron:HG00642_ch_T0001224:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030488	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG00642_ch_T0001224;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001224;transcript_name=HG00642_ch_T0001224;gene_name=FAM224A;ID=exon:HG00642_ch_T0001224:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025753	19030472	1000	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=HG00642_ch_T0001225;Name=FAM224A
HG00642_chrY	CAT	exon	19025753	19025945	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=exon:HG00642_ch_T0001225:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=intron:HG00642_ch_T0001225:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=exon:HG00642_ch_T0001225:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028822	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=intron:HG00642_ch_T0001225:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028823	19028912	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=exon:HG00642_ch_T0001225:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=intron:HG00642_ch_T0001225:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030472	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG00642_ch_T0001225;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001225;transcript_name=HG00642_ch_T0001225;gene_name=FAM224A;ID=exon:HG00642_ch_T0001225:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025755	19030433	1000	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=HG00642_ch_T0001226;Name=FAM224A
HG00642_chrY	CAT	exon	19025755	19025945	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=exon:HG00642_ch_T0001226:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=intron:HG00642_ch_T0001226:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=exon:HG00642_ch_T0001226:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19027842	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=intron:HG00642_ch_T0001226:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19027843	19028912	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=exon:HG00642_ch_T0001226:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=intron:HG00642_ch_T0001226:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030433	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG00642_ch_T0001226;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001226;transcript_name=HG00642_ch_T0001226;gene_name=FAM224A;ID=exon:HG00642_ch_T0001226:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025757	19052322	1000	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=HG00642_ch_T0001227;Name=FAM224A
HG00642_chrY	CAT	exon	19025757	19025945	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=intron:HG00642_ch_T0001227:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=intron:HG00642_ch_T0001227:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19051489	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=intron:HG00642_ch_T0001227:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=intron:HG00642_ch_T0001227:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19051788	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051789	19052262	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=intron:HG00642_ch_T0001227:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19052263	19052322	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG00642_ch_T0001227;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001227;transcript_name=HG00642_ch_T0001227;gene_name=FAM224A;ID=exon:HG00642_ch_T0001227:5;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025757	19052048	1000	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=HG00642_ch_T0001228;Name=FAM224A
HG00642_chrY	CAT	exon	19025757	19025945	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001228;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=exon:HG00642_ch_T0001228:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19051489	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001228;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=intron:HG00642_ch_T0001228:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001228;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=exon:HG00642_ch_T0001228:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001228;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=intron:HG00642_ch_T0001228:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052048	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG00642_ch_T0001228;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001228;transcript_name=HG00642_ch_T0001228;gene_name=FAM224A;ID=exon:HG00642_ch_T0001228:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025757	19030458	1000	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=HG00642_ch_T0001229;Name=FAM224A
HG00642_chrY	CAT	exon	19025757	19025945	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=exon:HG00642_ch_T0001229:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026159	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=intron:HG00642_ch_T0001229:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026160	19026295	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=exon:HG00642_ch_T0001229:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=intron:HG00642_ch_T0001229:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=exon:HG00642_ch_T0001229:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=intron:HG00642_ch_T0001229:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030458	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG00642_ch_T0001229;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001229;transcript_name=HG00642_ch_T0001229;gene_name=FAM224A;ID=exon:HG00642_ch_T0001229:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025761	19052320	1000	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=HG00642_ch_T0001230;Name=FAM224A
HG00642_chrY	CAT	exon	19025761	19025945	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=exon:HG00642_ch_T0001230:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=intron:HG00642_ch_T0001230:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=exon:HG00642_ch_T0001230:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=intron:HG00642_ch_T0001230:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=exon:HG00642_ch_T0001230:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19051489	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=intron:HG00642_ch_T0001230:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=exon:HG00642_ch_T0001230:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=intron:HG00642_ch_T0001230:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052320	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG00642_ch_T0001230;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001230;transcript_name=HG00642_ch_T0001230;gene_name=FAM224A;ID=exon:HG00642_ch_T0001230:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025761	19052318	1000	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=HG00642_ch_T0001231;Name=FAM224A
HG00642_chrY	CAT	exon	19025761	19025945	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=intron:HG00642_ch_T0001231:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028822	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=intron:HG00642_ch_T0001231:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028823	19028912	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19051489	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=intron:HG00642_ch_T0001231:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=intron:HG00642_ch_T0001231:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19051822	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051823	19052262	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=intron:HG00642_ch_T0001231:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19052263	19052318	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG00642_ch_T0001231;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001231;transcript_name=HG00642_ch_T0001231;gene_name=FAM224A;ID=exon:HG00642_ch_T0001231:5;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025766	19052320	1000	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=HG00642_ch_T0001232;Name=FAM224A
HG00642_chrY	CAT	exon	19025766	19025945	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=intron:HG00642_ch_T0001232:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=intron:HG00642_ch_T0001232:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=intron:HG00642_ch_T0001232:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030377	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19030378	19051489	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=intron:HG00642_ch_T0001232:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=intron:HG00642_ch_T0001232:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052320	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG00642_ch_T0001232;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001232;transcript_name=HG00642_ch_T0001232;gene_name=FAM224A;ID=exon:HG00642_ch_T0001232:5;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025800	19052318	1000	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=HG00642_ch_T0001233;Name=FAM224A
HG00642_chrY	CAT	exon	19025800	19025945	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=exon:HG00642_ch_T0001233:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026061	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=intron:HG00642_ch_T0001233:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026062	19026295	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=exon:HG00642_ch_T0001233:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=intron:HG00642_ch_T0001233:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=exon:HG00642_ch_T0001233:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19051489	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=intron:HG00642_ch_T0001233:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=exon:HG00642_ch_T0001233:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=intron:HG00642_ch_T0001233:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052318	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG00642_ch_T0001233;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001233;transcript_name=HG00642_ch_T0001233;gene_name=FAM224A;ID=exon:HG00642_ch_T0001233:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025800	19030458	1000	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=HG00642_ch_T0001234;Name=FAM224A
HG00642_chrY	CAT	exon	19025800	19025945	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001234;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=exon:HG00642_ch_T0001234:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19028794	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001234;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=intron:HG00642_ch_T0001234:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001234;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=exon:HG00642_ch_T0001234:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001234;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=intron:HG00642_ch_T0001234:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030458	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG00642_ch_T0001234;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001234;transcript_name=HG00642_ch_T0001234;gene_name=FAM224A;ID=exon:HG00642_ch_T0001234:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025800	19030172	1000	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=HG00642_ch_T0001235;Name=FAM224A
HG00642_chrY	CAT	exon	19025800	19025945	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001235;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=exon:HG00642_ch_T0001235:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001235;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=intron:HG00642_ch_T0001235:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001235;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=exon:HG00642_ch_T0001235:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028951	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001235;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=intron:HG00642_ch_T0001235:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028952	19030172	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG00642_ch_T0001235;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001235;transcript_name=HG00642_ch_T0001235;gene_name=FAM224A;ID=exon:HG00642_ch_T0001235:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025805	19030458	1000	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=HG00642_ch_T0001236;Name=FAM224A
HG00642_chrY	CAT	exon	19025805	19025945	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=exon:HG00642_ch_T0001236:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026173	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=intron:HG00642_ch_T0001236:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026174	19026295	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=exon:HG00642_ch_T0001236:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=intron:HG00642_ch_T0001236:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=exon:HG00642_ch_T0001236:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=intron:HG00642_ch_T0001236:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030458	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG00642_ch_T0001236;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001236;transcript_name=HG00642_ch_T0001236;gene_name=FAM224A;ID=exon:HG00642_ch_T0001236:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025806	19052318	1000	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=HG00642_ch_T0001237;Name=FAM224A
HG00642_chrY	CAT	exon	19025806	19025945	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030377	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19030378	19051489	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19051788	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:5;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051789	19052262	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=intron:HG00642_ch_T0001237:5;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19052263	19052318	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG00642_ch_T0001237;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001237;transcript_name=HG00642_ch_T0001237;gene_name=FAM224A;ID=exon:HG00642_ch_T0001237:6;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025806	19030431	1000	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=HG00642_ch_T0001238;Name=FAM224A
HG00642_chrY	CAT	exon	19025806	19025945	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001238;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=exon:HG00642_ch_T0001238:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026135	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001238;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=intron:HG00642_ch_T0001238:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026136	19026295	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001238;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=exon:HG00642_ch_T0001238:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19030247	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001238;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=intron:HG00642_ch_T0001238:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030431	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG00642_ch_T0001238;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001238;transcript_name=HG00642_ch_T0001238;gene_name=FAM224A;ID=exon:HG00642_ch_T0001238:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025807	19052045	1000	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=HG00642_ch_T0001239;Name=FAM224A
HG00642_chrY	CAT	exon	19025807	19026295	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=exon:HG00642_ch_T0001239:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=intron:HG00642_ch_T0001239:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=exon:HG00642_ch_T0001239:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=intron:HG00642_ch_T0001239:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030377	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=exon:HG00642_ch_T0001239:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19030378	19051489	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=intron:HG00642_ch_T0001239:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=exon:HG00642_ch_T0001239:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=intron:HG00642_ch_T0001239:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052045	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG00642_ch_T0001239;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001239;transcript_name=HG00642_ch_T0001239;gene_name=FAM224A;ID=exon:HG00642_ch_T0001239:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025843	19030458	1000	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=HG00642_ch_T0001240;Name=FAM224A
HG00642_chrY	CAT	exon	19025843	19025945	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=exon:HG00642_ch_T0001240:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19025946	19026061	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=intron:HG00642_ch_T0001240:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19026062	19026295	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=exon:HG00642_ch_T0001240:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028822	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=intron:HG00642_ch_T0001240:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028823	19028912	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=exon:HG00642_ch_T0001240:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=intron:HG00642_ch_T0001240:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030458	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG00642_ch_T0001240;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001240;transcript_name=HG00642_ch_T0001240;gene_name=FAM224A;ID=exon:HG00642_ch_T0001240:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19025857	19052816	1000	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=HG00642_ch_T0001241;Name=FAM224A
HG00642_chrY	CAT	exon	19025857	19026295	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=exon:HG00642_ch_T0001241:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028794	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=intron:HG00642_ch_T0001241:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028795	19028912	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=exon:HG00642_ch_T0001241:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19049605	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=intron:HG00642_ch_T0001241:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19049606	19049840	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=exon:HG00642_ch_T0001241:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19049841	19051489	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=intron:HG00642_ch_T0001241:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051490	19051574	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=exon:HG00642_ch_T0001241:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19051575	19051661	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=intron:HG00642_ch_T0001241:3;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19051662	19052816	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG00642_ch_T0001241;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001241;transcript_name=HG00642_ch_T0001241;gene_name=FAM224A;ID=exon:HG00642_ch_T0001241:4;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19026040	19030450	1000	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_G0000419;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=HG00642_ch_T0001242;Name=FAM224A
HG00642_chrY	CAT	exon	19026040	19026295	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001242;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=exon:HG00642_ch_T0001242:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19026296	19028822	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001242;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=intron:HG00642_ch_T0001242:0;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19028823	19028912	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001242;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=exon:HG00642_ch_T0001242:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19028913	19030247	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001242;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=intron:HG00642_ch_T0001242:1;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19030248	19030450	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG00642_ch_T0001242;gene_id=HG00642_ch_G0000419;Parent=HG00642_ch_T0001242;transcript_name=HG00642_ch_T0001242;gene_name=FAM224A;ID=exon:HG00642_ch_T0001242:2;Name=FAM224A;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19036564	19036653	.	+	.	source_gene_common_name=ENSG00000278391;source_gene=ENSG00000278391.1;alternative_source_transcripts=ENST00000614353.1;gene_id=HG00642_ch_G0000420;gene_biotype=misc_RNA;gene_name=ENSG00000278391;gene_sources=liftoff;ID=HG00642_ch_G0000420;Name=ENSG00000278391
HG00642_chrY	CAT	transcript	19036564	19036653	1000	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=HG00642_ch_T0001243;gene_id=HG00642_ch_G0000420;Parent=HG00642_ch_G0000420;transcript_name=HG00642_ch_T0001243;gene_name=ENSG00000278391;ID=HG00642_ch_T0001243;Name=ENSG00000278391
HG00642_chrY	CAT	exon	19036564	19036653	.	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=HG00642_ch_T0001243;gene_id=HG00642_ch_G0000420;Parent=HG00642_ch_T0001243;transcript_name=HG00642_ch_T0001243;gene_name=ENSG00000278391;ID=exon:HG00642_ch_T0001243:0;Name=ENSG00000278391;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19045727	19045842	.	-	.	source_gene_common_name=RNA5SP521;source_gene=ENSG00000252012.1;alternative_source_transcripts=ENST00000516144.1;gene_id=HG00642_ch_G0000421;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP521;gene_sources=liftoff;ID=HG00642_ch_G0000421;Name=RNA5SP521
HG00642_chrY	CAT	transcript	19045727	19045842	1000	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1;transcript_id=HG00642_ch_T0001244;gene_id=HG00642_ch_G0000421;Parent=HG00642_ch_G0000421;transcript_name=HG00642_ch_T0001244;gene_name=RNA5SP521;ID=HG00642_ch_T0001244;Name=RNA5SP521
HG00642_chrY	CAT	exon	19045727	19045842	.	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1;transcript_id=HG00642_ch_T0001244;gene_id=HG00642_ch_G0000421;Parent=HG00642_ch_T0001244;transcript_name=HG00642_ch_T0001244;gene_name=RNA5SP521;ID=exon:HG00642_ch_T0001244:0;Name=RNA5SP521;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19047640	19047752	.	-	.	source_gene_common_name=RNA5SP520;source_gene=ENSG00000252315.1;alternative_source_transcripts=ENST00000516858.1;gene_id=HG00642_ch_G0000422;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP520;gene_sources=liftoff;ID=HG00642_ch_G0000422;Name=RNA5SP520
HG00642_chrY	CAT	transcript	19047640	19047752	1000	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1;transcript_id=HG00642_ch_T0001245;gene_id=HG00642_ch_G0000422;Parent=HG00642_ch_G0000422;transcript_name=HG00642_ch_T0001245;gene_name=RNA5SP520;ID=HG00642_ch_T0001245;Name=RNA5SP520
HG00642_chrY	CAT	exon	19047640	19047752	.	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1;transcript_id=HG00642_ch_T0001245;gene_id=HG00642_ch_G0000422;Parent=HG00642_ch_T0001245;transcript_name=HG00642_ch_T0001245;gene_name=RNA5SP520;ID=exon:HG00642_ch_T0001245:0;Name=RNA5SP520;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19086580	19088757	.	+	.	source_gene_common_name=TUBB1P1;source_gene=ENSG00000249726.1;gene_id=HG00642_ch_G0000423;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P1;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000423;Name=TUBB1P1
HG00642_chrY	CAT	transcript	19086580	19088757	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_G0000423;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=HG00642_ch_T0001246;Name=TUBB1P1
HG00642_chrY	CAT	exon	19086580	19086636	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001246;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001246:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19086637	19086941	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001246;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=intron:HG00642_ch_T0001246:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19086942	19087240	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001246;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001246:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19087241	19087733	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001246;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=intron:HG00642_ch_T0001246:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19087734	19088757	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001246;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001246;transcript_name=HG00642_ch_T0001246;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001246:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19086580	19088757	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_G0000423;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=HG00642_ch_T0001247;Name=TUBB1P1
HG00642_chrY	CAT	exon	19086580	19086636	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001247:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19086637	19086941	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=intron:HG00642_ch_T0001247:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19086942	19087050	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001247:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19087051	19087130	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=intron:HG00642_ch_T0001247:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19087131	19087240	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001247:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19087241	19087733	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=intron:HG00642_ch_T0001247:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19087734	19088757	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00642_ch_T0001247;gene_id=HG00642_ch_G0000423;Parent=HG00642_ch_T0001247;transcript_name=HG00642_ch_T0001247;gene_name=TUBB1P1;ID=exon:HG00642_ch_T0001247:3;Name=TUBB1P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19088449	19104650	.	-	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3;gene_id=HG00642_ch_G0000424;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG00642_ch_G0000424;Name=FAM41AY2
HG00642_chrY	CAT	transcript	19088449	19090730	1000	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_G0000424;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=HG00642_ch_T0001248;Name=FAM41AY2
HG00642_chrY	CAT	exon	19088449	19089602	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001248;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001248:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19089603	19089684	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001248;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001248:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19089685	19089906	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001248;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001248:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19089907	19090599	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001248;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001248:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19090600	19090730	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001248;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001248;transcript_name=HG00642_ch_T0001248;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001248:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19090600	19104650	1000	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_G0000424;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=HG00642_ch_T0001250;Name=FAM41AY2
HG00642_chrY	CAT	exon	19090600	19090809	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19090810	19091083	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19091084	19091177	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19091178	19091286	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19091287	19091457	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19091458	19092050	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19092051	19092144	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19092145	19092391	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19092392	19092520	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19092521	19103847	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19103848	19103897	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19103898	19104492	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=intron:HG00642_ch_T0001250:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19104493	19104650	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00642_ch_T0001250;gene_id=HG00642_ch_G0000424;Parent=HG00642_ch_T0001250;transcript_name=HG00642_ch_T0001250;gene_name=FAM41AY2;ID=exon:HG00642_ch_T0001250:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19088903	19091116	.	-	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=HG00642_ch_G0000425;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=HG00642_ch_G0000425;Name=ENSG00000282909
HG00642_chrY	CAT	transcript	19088903	19091116	1000	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_G0000425;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=HG00642_ch_T0001249;Name=ENSG00000282909
HG00642_chrY	CAT	exon	19088903	19089029	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19089030	19089485	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001249:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19089486	19089602	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19089603	19089970	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001249:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19089971	19090065	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19090066	19090390	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001249:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19090391	19090510	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19090511	19090599	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001249:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19090600	19090864	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19090865	19090907	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=intron:HG00642_ch_T0001249:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19090908	19091116	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00642_ch_T0001249;gene_id=HG00642_ch_G0000425;Parent=HG00642_ch_T0001249;transcript_name=HG00642_ch_T0001249;gene_name=ENSG00000282909;ID=exon:HG00642_ch_T0001249:5;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19140400	19140728	.	+	.	source_gene_common_name=ELOCP13;source_gene=ENSG00000225716.1;alternative_source_transcripts=ENST00000443934.1;gene_id=HG00642_ch_G0000426;gene_biotype=processed_pseudogene;gene_name=ELOCP13;gene_sources=liftoff;ID=HG00642_ch_G0000426;Name=ELOCP13
HG00642_chrY	CAT	transcript	19140400	19140728	1000	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=HG00642_ch_T0001251;gene_id=HG00642_ch_G0000426;Parent=HG00642_ch_G0000426;transcript_name=HG00642_ch_T0001251;gene_name=ELOCP13;ID=HG00642_ch_T0001251;Name=ELOCP13
HG00642_chrY	CAT	exon	19140400	19140728	.	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=HG00642_ch_T0001251;gene_id=HG00642_ch_G0000426;Parent=HG00642_ch_T0001251;transcript_name=HG00642_ch_T0001251;gene_name=ELOCP13;ID=exon:HG00642_ch_T0001251:0;Name=ELOCP13;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19152755	19171738	.	-	.	source_gene_common_name=OFD1P4Y;source_gene=ENSG00000229406.1;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;gene_id=HG00642_ch_G0000427;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P4Y;gene_sources=liftoff;ID=HG00642_ch_G0000427;Name=OFD1P4Y
HG00642_chrY	CAT	transcript	19152755	19171738	1000	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_G0000427;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=HG00642_ch_T0001252;Name=OFD1P4Y
HG00642_chrY	CAT	exon	19152755	19152868	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19152869	19154497	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19154498	19154588	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19154589	19155693	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19155694	19155763	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19155764	19157549	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19157550	19157668	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19157669	19159836	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19159837	19159942	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19159943	19163052	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19163053	19163220	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19163221	19163516	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19163517	19163653	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19163654	19167866	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19167867	19167897	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19167898	19167984	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19167985	19168052	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19168053	19170270	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19170271	19170471	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19170472	19171664	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=intron:HG00642_ch_T0001252:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19171665	19171738	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00642_ch_T0001252;gene_id=HG00642_ch_G0000427;Parent=HG00642_ch_T0001252;transcript_name=HG00642_ch_T0001252;gene_name=OFD1P4Y;ID=exon:HG00642_ch_T0001252:10;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19179860	19183848	.	+	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=HG00642_ch_G0000428;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=HG00642_ch_G0000428;Name=ENSG00000307031
HG00642_chrY	CAT	transcript	19179860	19183848	1000	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_G0000428;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=HG00642_ch_T0001253;Name=ENSG00000307031
HG00642_chrY	CAT	exon	19179860	19180081	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_T0001253;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=exon:HG00642_ch_T0001253:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19180082	19180699	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_T0001253;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=intron:HG00642_ch_T0001253:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19180700	19180831	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_T0001253;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=exon:HG00642_ch_T0001253:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19180832	19183606	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_T0001253;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=intron:HG00642_ch_T0001253:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19183607	19183848	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00642_ch_T0001253;gene_id=HG00642_ch_G0000428;Parent=HG00642_ch_T0001253;transcript_name=HG00642_ch_T0001253;gene_name=ENSG00000307031;ID=exon:HG00642_ch_T0001253:2;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19180700	19187016	.	+	.	source_gene_common_name=USP9YP14;source_gene=ENSG00000227494.2;gene_id=HG00642_ch_G0000429;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP14;gene_sources=liftoff;ID=HG00642_ch_G0000429;Name=USP9YP14
HG00642_chrY	CAT	transcript	19180700	19187016	1000	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_G0000429;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=HG00642_ch_T0001254;Name=USP9YP14
HG00642_chrY	CAT	exon	19180700	19180833	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=exon:HG00642_ch_T0001254:0;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19180834	19185804	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=intron:HG00642_ch_T0001254:0;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19185805	19185961	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=exon:HG00642_ch_T0001254:1;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19185962	19186368	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=intron:HG00642_ch_T0001254:1;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19186369	19186544	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=exon:HG00642_ch_T0001254:2;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19186545	19186920	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=intron:HG00642_ch_T0001254:2;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19186921	19187016	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00642_ch_T0001254;gene_id=HG00642_ch_G0000429;Parent=HG00642_ch_T0001254;transcript_name=HG00642_ch_T0001254;gene_name=USP9YP14;ID=exon:HG00642_ch_T0001254:3;Name=USP9YP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19186122	19186283	.	+	.	source_gene_common_name=RNU1-48P;source_gene=ENSG00000252209.1;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;gene_id=HG00642_ch_G0000430;gene_biotype=snRNA;gene_name=RNU1-48P;gene_sources=liftoff;ID=HG00642_ch_G0000430;Name=RNU1-48P
HG00642_chrY	CAT	transcript	19186122	19186283	1000	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG00642_ch_T0001255;gene_id=HG00642_ch_G0000430;Parent=HG00642_ch_G0000430;transcript_name=HG00642_ch_T0001255;gene_name=RNU1-48P;ID=HG00642_ch_T0001255;Name=RNU1-48P
HG00642_chrY	CAT	exon	19186122	19186283	.	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG00642_ch_T0001255;gene_id=HG00642_ch_G0000430;Parent=HG00642_ch_T0001255;transcript_name=HG00642_ch_T0001255;gene_name=RNU1-48P;ID=exon:HG00642_ch_T0001255:0;Name=RNU1-48P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19190531	19193913	.	-	.	source_gene_common_name=USP9YP5;source_gene=ENSG00000249634.1;alternative_source_transcripts=ENST00000511770.1;gene_id=HG00642_ch_G0000431;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP5;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000431;Name=USP9YP5
HG00642_chrY	CAT	transcript	19190531	19193913	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_G0000431;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=HG00642_ch_T0001256;Name=USP9YP5
HG00642_chrY	CAT	exon	19190531	19190721	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001256;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001256:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19190722	19192625	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001256;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=intron:HG00642_ch_T0001256:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19192626	19192923	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001256;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001256:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19192924	19193692	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001256;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=intron:HG00642_ch_T0001256:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19193693	19193913	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG00642_ch_T0001256;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001256;transcript_name=HG00642_ch_T0001256;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001256:2;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19190531	19193913	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_G0000431;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=HG00642_ch_T0001257;Name=USP9YP5
HG00642_chrY	CAT	exon	19190531	19190721	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001257:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19190722	19192625	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=intron:HG00642_ch_T0001257:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19192626	19192718	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001257:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19192719	19192798	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=intron:HG00642_ch_T0001257:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19192799	19192923	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001257:2;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19192924	19193692	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=intron:HG00642_ch_T0001257:2;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19193693	19193913	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00642_ch_T0001257;gene_id=HG00642_ch_G0000431;Parent=HG00642_ch_T0001257;transcript_name=HG00642_ch_T0001257;gene_name=USP9YP5;ID=exon:HG00642_ch_T0001257:3;Name=USP9YP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19191356	19247309	.	+	.	source_gene_common_name=ENSG00000251510;source_gene=ENSG00000251510.2;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;gene_id=HG00642_ch_G0000432;gene_biotype=lncRNA;gene_name=ENSG00000251510;gene_sources=liftoff;ID=HG00642_ch_G0000432;Name=ENSG00000251510
HG00642_chrY	CAT	transcript	19191356	19247309	1000	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_G0000432;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=HG00642_ch_T0001258;Name=ENSG00000251510
HG00642_chrY	CAT	exon	19191356	19191433	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001258:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19191434	19200229	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=intron:HG00642_ch_T0001258:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19200230	19200661	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001258:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19200662	19229249	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=intron:HG00642_ch_T0001258:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19229250	19229447	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001258:2;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19229448	19230097	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=intron:HG00642_ch_T0001258:2;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19230098	19230206	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001258:3;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19230207	19246643	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=intron:HG00642_ch_T0001258:3;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19246644	19247309	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG00642_ch_T0001258;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001258;transcript_name=HG00642_ch_T0001258;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001258:4;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19200440	19212777	1000	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG00642_ch_T0001259;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_G0000432;transcript_name=HG00642_ch_T0001259;gene_name=ENSG00000251510;ID=HG00642_ch_T0001259;Name=ENSG00000251510
HG00642_chrY	CAT	exon	19200440	19200661	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG00642_ch_T0001259;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001259;transcript_name=HG00642_ch_T0001259;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001259:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19200662	19212550	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG00642_ch_T0001259;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001259;transcript_name=HG00642_ch_T0001259;gene_name=ENSG00000251510;ID=intron:HG00642_ch_T0001259:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19212551	19212777	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG00642_ch_T0001259;gene_id=HG00642_ch_G0000432;Parent=HG00642_ch_T0001259;transcript_name=HG00642_ch_T0001259;gene_name=ENSG00000251510;ID=exon:HG00642_ch_T0001259:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19208187	19208678	.	+	.	source_gene_common_name=XKRYP1;source_gene=ENSG00000238067.1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;gene_id=HG00642_ch_G0000433;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP1;gene_sources=liftoff;ID=HG00642_ch_G0000433;Name=XKRYP1
HG00642_chrY	CAT	transcript	19208187	19208678	1000	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG00642_ch_T0001260;gene_id=HG00642_ch_G0000433;Parent=HG00642_ch_G0000433;transcript_name=HG00642_ch_T0001260;gene_name=XKRYP1;ID=HG00642_ch_T0001260;Name=XKRYP1
HG00642_chrY	CAT	exon	19208187	19208678	.	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG00642_ch_T0001260;gene_id=HG00642_ch_G0000433;Parent=HG00642_ch_T0001260;transcript_name=HG00642_ch_T0001260;gene_name=XKRYP1;ID=exon:HG00642_ch_T0001260:0;Name=XKRYP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19231936	19232266	.	-	.	source_gene_common_name=ELOCP7;source_gene=ENSG00000230377.1;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;gene_id=HG00642_ch_G0000434;gene_biotype=processed_pseudogene;gene_name=ELOCP7;gene_sources=liftoff;ID=HG00642_ch_G0000434;Name=ELOCP7
HG00642_chrY	CAT	transcript	19231936	19232266	1000	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG00642_ch_T0001261;gene_id=HG00642_ch_G0000434;Parent=HG00642_ch_G0000434;transcript_name=HG00642_ch_T0001261;gene_name=ELOCP7;ID=HG00642_ch_T0001261;Name=ELOCP7
HG00642_chrY	CAT	exon	19231936	19232266	.	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG00642_ch_T0001261;gene_id=HG00642_ch_G0000434;Parent=HG00642_ch_T0001261;transcript_name=HG00642_ch_T0001261;gene_name=ELOCP7;ID=exon:HG00642_ch_T0001261:0;Name=ELOCP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19240590	19243738	.	+	.	source_gene_common_name=USP9YP1;source_gene=ENSG00000250951.1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;gene_id=HG00642_ch_G0000435;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP1;gene_sources=liftoff;ID=HG00642_ch_G0000435;Name=USP9YP1
HG00642_chrY	CAT	transcript	19240590	19243738	1000	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_G0000435;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=HG00642_ch_T0001262;Name=USP9YP1
HG00642_chrY	CAT	exon	19240590	19240719	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_T0001262;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=exon:HG00642_ch_T0001262:0;Name=USP9YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19240720	19242455	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_T0001262;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=intron:HG00642_ch_T0001262:0;Name=USP9YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19242456	19243202	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_T0001262;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=exon:HG00642_ch_T0001262:1;Name=USP9YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19243203	19243613	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_T0001262;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=intron:HG00642_ch_T0001262:1;Name=USP9YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19243614	19243738	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG00642_ch_T0001262;gene_id=HG00642_ch_G0000435;Parent=HG00642_ch_T0001262;transcript_name=HG00642_ch_T0001262;gene_name=USP9YP1;ID=exon:HG00642_ch_T0001262:2;Name=USP9YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19246302	19288577	.	+	.	source_gene_common_name=HSFY1;source_gene=ENSG00000172468.14;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;gene_id=HG00642_ch_G0000436;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff;ID=HG00642_ch_G0000436;Name=HSFY1
HG00642_chrY	CAT	transcript	19246302	19288577	100	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_G0000436;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=HG00642_ch_T0001263;Name=HSFY1
HG00642_chrY	CAT	exon	19246302	19246911	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=exon:HG00642_ch_T0001263:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19246399	19246911	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001263:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19246399	19246401	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=start_codon:HG00642_ch_T0001263;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19246912	19288149	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=intron:HG00642_ch_T0001263:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19288150	19288577	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=exon:HG00642_ch_T0001263:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19288150	19288248	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001263:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19288246	19288248	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG00642_ch_T0001263;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001263;transcript_name=HG00642_ch_T0001263;gene_name=HSFY1;ID=stop_codon:HG00642_ch_T0001263;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19246302	19288577	1000	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_G0000436;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=HG00642_ch_T0001264;Name=HSFY1
HG00642_chrY	CAT	exon	19246302	19246911	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19246399	19246911	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001264:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19246399	19246401	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=start_codon:HG00642_ch_T0001264;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19246912	19249724	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=intron:HG00642_ch_T0001264:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19249725	19249834	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19249725	19249834	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001264:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19249835	19250397	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=intron:HG00642_ch_T0001264:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19250398	19250484	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:2;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19250398	19250419	.	+	1	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001264:2;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19250417	19250419	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=stop_codon:HG00642_ch_T0001264;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19250485	19251531	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=intron:HG00642_ch_T0001264:2;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19251532	19251686	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:3;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19251687	19282286	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=intron:HG00642_ch_T0001264:3;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19282287	19282372	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:4;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19282373	19288149	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=intron:HG00642_ch_T0001264:4;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19288150	19288577	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG00642_ch_T0001264;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001264;transcript_name=HG00642_ch_T0001264;gene_name=HSFY1;ID=exon:HG00642_ch_T0001264:5;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19246331	19248203	100	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_G0000436;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=HG00642_ch_T0001265;Name=HSFY1
HG00642_chrY	CAT	exon	19246331	19246911	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=exon:HG00642_ch_T0001265:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19246399	19246911	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001265:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19246399	19246401	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=start_codon:HG00642_ch_T0001265;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19246912	19247389	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=intron:HG00642_ch_T0001265:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19247390	19248203	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=exon:HG00642_ch_T0001265:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19247390	19248082	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001265:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19248080	19248082	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG00642_ch_T0001265;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001265;transcript_name=HG00642_ch_T0001265;gene_name=HSFY1;ID=stop_codon:HG00642_ch_T0001265;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19246331	19251080	100	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_G0000436;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=HG00642_ch_T0001266;Name=HSFY1
HG00642_chrY	CAT	exon	19246331	19246911	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=exon:HG00642_ch_T0001266:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19246399	19246911	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001266:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19246399	19246401	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=start_codon:HG00642_ch_T0001266;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19246912	19249724	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=intron:HG00642_ch_T0001266:0;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19249725	19249834	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=exon:HG00642_ch_T0001266:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19249725	19249834	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001266:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19249835	19250397	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=intron:HG00642_ch_T0001266:1;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19250398	19251080	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=exon:HG00642_ch_T0001266:2;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19250398	19250419	.	+	1	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=CDS:HG00642_ch_T0001266:2;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19250417	19250419	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG00642_ch_T0001266;gene_id=HG00642_ch_G0000436;Parent=HG00642_ch_T0001266;transcript_name=HG00642_ch_T0001266;gene_name=HSFY1;ID=stop_codon:HG00642_ch_T0001266;Name=HSFY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19278031	19278174	.	+	.	source_gene_common_name=GPM6BP1;source_gene=ENSG00000230458.1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;gene_id=HG00642_ch_G0000437;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP1;gene_sources=liftoff;ID=HG00642_ch_G0000437;Name=GPM6BP1
HG00642_chrY	CAT	transcript	19278031	19278174	1000	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=HG00642_ch_T0001267;gene_id=HG00642_ch_G0000437;Parent=HG00642_ch_G0000437;transcript_name=HG00642_ch_T0001267;gene_name=GPM6BP1;ID=HG00642_ch_T0001267;Name=GPM6BP1
HG00642_chrY	CAT	exon	19278031	19278174	.	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=HG00642_ch_T0001267;gene_id=HG00642_ch_G0000437;Parent=HG00642_ch_T0001267;transcript_name=HG00642_ch_T0001267;gene_name=GPM6BP1;ID=exon:HG00642_ch_T0001267:0;Name=GPM6BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19280820	19297728	.	-	.	source_gene_common_name=TTTY9B;source_gene=ENSG00000131007.10;gene_id=HG00642_ch_G0000438;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG00642_ch_G0000438;Name=TTTY9B
HG00642_chrY	CAT	transcript	19280820	19288326	1000	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_G0000438;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=HG00642_ch_T0001268;Name=TTTY9B
HG00642_chrY	CAT	exon	19280820	19281962	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001268:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19281963	19287025	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001268:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19287026	19287162	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001268:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19287163	19287744	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001268:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19287745	19287858	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001268:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19287859	19288219	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001268:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19288220	19288326	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001268;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001268;transcript_name=HG00642_ch_T0001268;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001268:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19280820	19290135	1000	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_G0000438;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=HG00642_ch_T0001269;Name=TTTY9B
HG00642_chrY	CAT	exon	19280820	19281962	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001269:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19281963	19287025	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001269:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19287026	19287162	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001269:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19287163	19287744	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001269:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19287745	19287858	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001269:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19287859	19288219	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001269:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19288220	19288320	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001269:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19288321	19289993	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001269:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19289994	19290135	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001269;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001269;transcript_name=HG00642_ch_T0001269;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001269:4;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19289568	19297728	1000	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_G0000438;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=HG00642_ch_T0001271;Name=TTTY9B
HG00642_chrY	CAT	exon	19289568	19290213	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001271;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001271:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19290214	19297028	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001271;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001271:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19297029	19297290	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001271;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001271:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19297291	19297471	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001271;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=intron:HG00642_ch_T0001271:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19297472	19297728	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00642_ch_T0001271;gene_id=HG00642_ch_G0000438;Parent=HG00642_ch_T0001271;transcript_name=HG00642_ch_T0001271;gene_name=TTTY9B;ID=exon:HG00642_ch_T0001271:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19281677	19328695	.	-	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=HG00642_ch_G0000439;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=liftoff;ID=HG00642_ch_G0000439;Name=OFD1P5Y
HG00642_chrY	CAT	transcript	19281677	19328695	1000	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_G0000439;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=HG00642_ch_T0001270;Name=OFD1P5Y
HG00642_chrY	CAT	exon	19281677	19281970	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19281971	19282267	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19282268	19282334	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19282335	19283523	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19283524	19283674	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19283675	19287025	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19287026	19287162	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19287163	19288219	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19288220	19288320	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19288321	19298836	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19298837	19298948	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19298949	19299323	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19299324	19299950	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19299951	19301997	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19301998	19302109	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19302110	19302643	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19302644	19302773	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19302774	19303640	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19303641	19303776	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19303777	19305364	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19305365	19305438	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19305439	19307074	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19307075	19307202	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19307203	19308954	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19308955	19309061	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19309062	19311859	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19311860	19312010	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19312011	19313815	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19313816	19313900	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19313901	19321683	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19321684	19321855	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19321856	19326637	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19326638	19326774	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19326775	19328590	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=intron:HG00642_ch_T0001270:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19328591	19328695	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00642_ch_T0001270;gene_id=HG00642_ch_G0000439;Parent=HG00642_ch_T0001270;transcript_name=HG00642_ch_T0001270;gene_name=OFD1P5Y;ID=exon:HG00642_ch_T0001270:17;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19295923	19328711	.	+	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;gene_id=HG00642_ch_G0000440;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=liftoff;ID=HG00642_ch_G0000440;Name=ENSG00000301107
HG00642_chrY	CAT	transcript	19295923	19328711	1000	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_G0000440;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=HG00642_ch_T0001272;Name=ENSG00000301107
HG00642_chrY	CAT	exon	19295923	19296005	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_T0001272;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=exon:HG00642_ch_T0001272:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19296006	19319432	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_T0001272;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=intron:HG00642_ch_T0001272:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19319433	19319523	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_T0001272;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=exon:HG00642_ch_T0001272:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19319524	19328479	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_T0001272;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=intron:HG00642_ch_T0001272:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19328480	19328711	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG00642_ch_T0001272;gene_id=HG00642_ch_G0000440;Parent=HG00642_ch_T0001272;transcript_name=HG00642_ch_T0001272;gene_name=ENSG00000301107;ID=exon:HG00642_ch_T0001272:2;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19349295	19349903	.	+	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;gene_id=HG00642_ch_G0000441;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=HG00642_ch_G0000441;Name=RAB9AP4
HG00642_chrY	CAT	transcript	19349295	19349903	1000	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG00642_ch_T0001273;gene_id=HG00642_ch_G0000441;Parent=HG00642_ch_G0000441;transcript_name=HG00642_ch_T0001273;gene_name=RAB9AP4;ID=HG00642_ch_T0001273;Name=RAB9AP4
HG00642_chrY	CAT	exon	19349295	19349903	.	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG00642_ch_T0001273;gene_id=HG00642_ch_G0000441;Parent=HG00642_ch_T0001273;transcript_name=HG00642_ch_T0001273;gene_name=RAB9AP4;ID=exon:HG00642_ch_T0001273:0;Name=RAB9AP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19355147	19355817	.	-	.	source_gene_common_name=TRAPPC2P7;source_gene=ENSG00000249606.1;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;gene_id=HG00642_ch_G0000442;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P7;gene_sources=liftoff;ID=HG00642_ch_G0000442;Name=TRAPPC2P7
HG00642_chrY	CAT	transcript	19355147	19355817	1000	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00642_ch_T0001274;gene_id=HG00642_ch_G0000442;Parent=HG00642_ch_G0000442;transcript_name=HG00642_ch_T0001274;gene_name=TRAPPC2P7;ID=HG00642_ch_T0001274;Name=TRAPPC2P7
HG00642_chrY	CAT	exon	19355147	19355232	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00642_ch_T0001274;gene_id=HG00642_ch_G0000442;Parent=HG00642_ch_T0001274;transcript_name=HG00642_ch_T0001274;gene_name=TRAPPC2P7;ID=exon:HG00642_ch_T0001274:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19355233	19355672	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00642_ch_T0001274;gene_id=HG00642_ch_G0000442;Parent=HG00642_ch_T0001274;transcript_name=HG00642_ch_T0001274;gene_name=TRAPPC2P7;ID=intron:HG00642_ch_T0001274:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19355673	19355817	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00642_ch_T0001274;gene_id=HG00642_ch_G0000442;Parent=HG00642_ch_T0001274;transcript_name=HG00642_ch_T0001274;gene_name=TRAPPC2P7;ID=exon:HG00642_ch_T0001274:1;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19373236	19378458	.	+	.	source_gene_common_name=ENSG00000302211;source_gene=ENSG00000302211.1;gene_id=HG00642_ch_G0000443;gene_biotype=lncRNA;gene_name=ENSG00000302211;gene_sources=liftoff;ID=HG00642_ch_G0000443;Name=ENSG00000302211
HG00642_chrY	CAT	transcript	19373236	19375570	1000	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_G0000443;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=HG00642_ch_T0001275;Name=ENSG00000302211
HG00642_chrY	CAT	exon	19373236	19373367	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001275;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001275:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373368	19373841	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001275;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=intron:HG00642_ch_T0001275:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19373842	19373940	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001275;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001275:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373941	19374994	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001275;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=intron:HG00642_ch_T0001275:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19374995	19375570	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001275;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001275;transcript_name=HG00642_ch_T0001275;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001275:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19373312	19378458	1000	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_G0000443;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=HG00642_ch_T0001276;Name=ENSG00000302211
HG00642_chrY	CAT	exon	19373312	19373367	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001276:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373368	19373841	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=intron:HG00642_ch_T0001276:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19373842	19373940	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001276:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373941	19374994	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=intron:HG00642_ch_T0001276:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19374995	19375197	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001276:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19375198	19378219	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=intron:HG00642_ch_T0001276:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19378220	19378458	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00642_ch_T0001276;gene_id=HG00642_ch_G0000443;Parent=HG00642_ch_T0001276;transcript_name=HG00642_ch_T0001276;gene_name=ENSG00000302211;ID=exon:HG00642_ch_T0001276:3;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19373658	19437721	.	+	.	source_gene_common_name=OFD1P6Y;source_gene=ENSG00000242153.8;gene_id=HG00642_ch_G0000444;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P6Y;gene_sources=liftoff;ID=HG00642_ch_G0000444;Name=OFD1P6Y
HG00642_chrY	CAT	transcript	19373658	19437721	1000	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_G0000444;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=HG00642_ch_T0001277;Name=OFD1P6Y
HG00642_chrY	CAT	exon	19373658	19373669	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:0;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373670	19373841	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:0;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19373842	19373940	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:1;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19373941	19374994	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:1;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19374995	19375197	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:2;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19375198	19378066	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:2;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19378067	19378134	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:3;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19378135	19378222	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:3;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19378223	19378253	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:4;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19378254	19390947	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:4;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19390948	19391052	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:5;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19391053	19392868	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:5;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19392869	19393005	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:6;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19393006	19397787	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:6;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19397788	19397959	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:7;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19397960	19410588	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:7;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19410589	19410695	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:8;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19410696	19412448	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:8;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19412449	19412547	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:9;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19412548	19414211	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:9;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19414212	19414285	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:10;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19414286	19415873	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:10;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19415874	19416009	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:11;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19416010	19416876	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:11;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19416877	19417006	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:12;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19417007	19417540	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:12;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19417541	19417652	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:13;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19417653	19419699	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:13;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19419700	19420327	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:14;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19420328	19420701	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:14;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19420702	19420813	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:15;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19420814	19431328	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:15;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19431329	19431429	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:16;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19431430	19432486	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:16;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19432487	19432623	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:17;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19432624	19435974	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:17;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19435975	19436125	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:18;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19436126	19437314	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:18;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19437315	19437381	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:19;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19437382	19437678	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=intron:HG00642_ch_T0001277:19;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19437679	19437721	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG00642_ch_T0001277;gene_id=HG00642_ch_G0000444;Parent=HG00642_ch_T0001277;transcript_name=HG00642_ch_T0001277;gene_name=OFD1P6Y;ID=exon:HG00642_ch_T0001277:20;Name=OFD1P6Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19390937	19423758	.	-	.	source_gene_common_name=ENSG00000295232;source_gene=ENSG00000295232.1;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;gene_id=HG00642_ch_G0000445;gene_biotype=lncRNA;gene_name=ENSG00000295232;gene_sources=liftoff;ID=HG00642_ch_G0000445;Name=ENSG00000295232
HG00642_chrY	CAT	transcript	19390937	19423758	1000	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_G0000445;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=HG00642_ch_T0001278;Name=ENSG00000295232
HG00642_chrY	CAT	exon	19390937	19391163	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_T0001278;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=exon:HG00642_ch_T0001278:0;Name=ENSG00000295232;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19391164	19400119	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_T0001278;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=intron:HG00642_ch_T0001278:0;Name=ENSG00000295232;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19400120	19400210	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_T0001278;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=exon:HG00642_ch_T0001278:1;Name=ENSG00000295232;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19400211	19423644	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_T0001278;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=intron:HG00642_ch_T0001278:1;Name=ENSG00000295232;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19423645	19423758	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG00642_ch_T0001278;gene_id=HG00642_ch_G0000445;Parent=HG00642_ch_T0001278;transcript_name=HG00642_ch_T0001278;gene_name=ENSG00000295232;ID=exon:HG00642_ch_T0001278:2;Name=ENSG00000295232;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19429514	19438829	.	+	.	source_gene_common_name=TTTY9A;source_gene=ENSG00000290716.1;gene_id=HG00642_ch_G0000446;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG00642_ch_G0000446;Name=TTTY9A
HG00642_chrY	CAT	transcript	19429514	19438829	1000	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_G0000446;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=HG00642_ch_T0001279;Name=TTTY9A
HG00642_chrY	CAT	exon	19429514	19429655	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=exon:HG00642_ch_T0001279:0;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19429656	19431328	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=intron:HG00642_ch_T0001279:0;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19431329	19431429	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=exon:HG00642_ch_T0001279:1;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19431430	19431790	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=intron:HG00642_ch_T0001279:1;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19431791	19431904	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=exon:HG00642_ch_T0001279:2;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19431905	19432486	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=intron:HG00642_ch_T0001279:2;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19432487	19432623	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=exon:HG00642_ch_T0001279:3;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19432624	19437686	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=intron:HG00642_ch_T0001279:3;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19437687	19438829	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG00642_ch_T0001279;gene_id=HG00642_ch_G0000446;Parent=HG00642_ch_T0001279;transcript_name=HG00642_ch_T0001279;gene_name=TTTY9A;ID=exon:HG00642_ch_T0001279:4;Name=TTTY9A;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19431072	19473382	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;gene_id=HG00642_ch_G0000447;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=HG00642_ch_G0000447;Name=HSFY2
HG00642_chrY	CAT	transcript	19431072	19473362	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_G0000447;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=HG00642_ch_T0001280;Name=HSFY2
HG00642_chrY	CAT	exon	19431072	19431499	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=exon:HG00642_ch_T0001280:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19431401	19431499	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001280:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19431401	19431403	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=stop_codon:HG00642_ch_T0001280;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19431500	19472752	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=intron:HG00642_ch_T0001280:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19472753	19473362	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=exon:HG00642_ch_T0001280:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19472753	19473265	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001280:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19473263	19473265	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG00642_ch_T0001280;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001280;transcript_name=HG00642_ch_T0001280;gene_name=HSFY2;ID=start_codon:HG00642_ch_T0001280;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19431072	19473362	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_G0000447;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=HG00642_ch_T0001281;Name=HSFY2
HG00642_chrY	CAT	exon	19431072	19431499	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19431500	19437276	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=intron:HG00642_ch_T0001281:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19437277	19437362	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19437363	19467977	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=intron:HG00642_ch_T0001281:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19467978	19468132	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:2;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19468133	19469179	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=intron:HG00642_ch_T0001281:2;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19469180	19469266	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:3;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19469267	19469829	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=intron:HG00642_ch_T0001281:3;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19469830	19469939	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:4;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19469940	19472752	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=intron:HG00642_ch_T0001281:4;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19472753	19473362	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG00642_ch_T0001281;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001281;transcript_name=HG00642_ch_T0001281;gene_name=HSFY2;ID=exon:HG00642_ch_T0001281:5;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19468568	19473333	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_G0000447;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=HG00642_ch_T0001283;Name=HSFY2
HG00642_chrY	CAT	exon	19468568	19469266	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=exon:HG00642_ch_T0001283:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19469245	19469266	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001283:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19469245	19469247	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=stop_codon:HG00642_ch_T0001283;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19469267	19469829	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=intron:HG00642_ch_T0001283:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19469830	19469939	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=exon:HG00642_ch_T0001283:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19469830	19469939	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001283:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19469940	19472752	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=intron:HG00642_ch_T0001283:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19472753	19473333	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=exon:HG00642_ch_T0001283:2;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19472753	19473265	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001283:2;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19473263	19473265	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG00642_ch_T0001283;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001283;transcript_name=HG00642_ch_T0001283;gene_name=HSFY2;ID=start_codon:HG00642_ch_T0001283;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19471461	19473382	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_G0000447;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=HG00642_ch_T0001284;Name=HSFY2
HG00642_chrY	CAT	exon	19471461	19472274	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=exon:HG00642_ch_T0001284:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19471582	19472274	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001284:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	19471582	19471584	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=stop_codon:HG00642_ch_T0001284;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19472275	19472752	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=intron:HG00642_ch_T0001284:0;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19472753	19473382	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=exon:HG00642_ch_T0001284:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	19472753	19473265	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=CDS:HG00642_ch_T0001284:1;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	19473263	19473265	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG00642_ch_T0001284;gene_id=HG00642_ch_G0000447;Parent=HG00642_ch_T0001284;transcript_name=HG00642_ch_T0001284;gene_name=HSFY2;ID=start_codon:HG00642_ch_T0001284;Name=HSFY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19441475	19441618	.	-	.	source_gene_common_name=GPM6BP2;source_gene=ENSG00000236429.1;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;gene_id=HG00642_ch_G0000448;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP2;gene_sources=liftoff;ID=HG00642_ch_G0000448;Name=GPM6BP2
HG00642_chrY	CAT	transcript	19441475	19441618	1000	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=HG00642_ch_T0001282;gene_id=HG00642_ch_G0000448;Parent=HG00642_ch_G0000448;transcript_name=HG00642_ch_T0001282;gene_name=GPM6BP2;ID=HG00642_ch_T0001282;Name=GPM6BP2
HG00642_chrY	CAT	exon	19441475	19441618	.	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=HG00642_ch_T0001282;gene_id=HG00642_ch_G0000448;Parent=HG00642_ch_T0001282;transcript_name=HG00642_ch_T0001282;gene_name=GPM6BP2;ID=exon:HG00642_ch_T0001282:0;Name=GPM6BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19472353	19777206	.	-	.	source_gene_common_name=TTTY14;source_gene=ENSG00000176728.11;gene_id=HG00642_ch_G0000449;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG00642_ch_G0000449;Name=TTTY14
HG00642_chrY	CAT	transcript	19472353	19519153	1000	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=HG00642_ch_T0001285;Name=TTTY14
HG00642_chrY	CAT	exon	19472353	19473020	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=exon:HG00642_ch_T0001285:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19489457	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=intron:HG00642_ch_T0001285:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19489458	19489566	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=exon:HG00642_ch_T0001285:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19489567	19490216	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=intron:HG00642_ch_T0001285:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=exon:HG00642_ch_T0001285:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19519001	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=intron:HG00642_ch_T0001285:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519153	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001285;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001285;transcript_name=HG00642_ch_T0001285;gene_name=TTTY14;ID=exon:HG00642_ch_T0001285:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19472390	19776873	1000	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=HG00642_ch_T0001286;Name=TTTY14
HG00642_chrY	CAT	exon	19472390	19473020	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19489457	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19489458	19489566	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19489567	19490216	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19519001	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19532644	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19532645	19532746	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19532747	19533404	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533405	19536056	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536057	19538400	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538401	19538521	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538522	19538830	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19576719	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19741021	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19742998	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744313	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744314	19744347	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19744893	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744894	19744943	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744944	19776695	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=intron:HG00642_ch_T0001286:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776873	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001286;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001286;transcript_name=HG00642_ch_T0001286;gene_name=TTTY14;ID=exon:HG00642_ch_T0001286:14;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19472594	19777025	1000	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=HG00642_ch_T0001287;Name=TTTY14
HG00642_chrY	CAT	exon	19472594	19473020	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19490216	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19513262	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19572095	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19572096	19572486	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19577856	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19577857	19579483	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19579484	19747374	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19747375	19747459	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19747460	19768374	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776918	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=intron:HG00642_ch_T0001287:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776919	19777025	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001287;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001287;transcript_name=HG00642_ch_T0001287;gene_name=TTTY14;ID=exon:HG00642_ch_T0001287:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19472594	19776725	1000	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=HG00642_ch_T0001288;Name=TTTY14
HG00642_chrY	CAT	exon	19472594	19473020	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19490216	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19513262	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19572095	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19572096	19572486	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19577856	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19577857	19579483	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19579484	19747374	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19747375	19747459	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19747460	19748424	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19748425	19748564	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19748565	19776695	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=intron:HG00642_ch_T0001288:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776725	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001288;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001288;transcript_name=HG00642_ch_T0001288;gene_name=TTTY14;ID=exon:HG00642_ch_T0001288:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19472594	19775682	1000	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=HG00642_ch_T0001289;Name=TTTY14
HG00642_chrY	CAT	exon	19472594	19473020	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19490216	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19513262	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19572095	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19572096	19572486	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19741021	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19741238	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19741239	19742814	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19742815	19744347	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19768374	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=intron:HG00642_ch_T0001289:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775682	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001289;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001289;transcript_name=HG00642_ch_T0001289;gene_name=TTTY14;ID=exon:HG00642_ch_T0001289:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19472594	19710993	1000	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=HG00642_ch_T0001290;Name=TTTY14
HG00642_chrY	CAT	exon	19472594	19473020	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19473021	19490216	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19490217	19490414	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19490415	19513262	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19572095	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19572096	19572486	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19626726	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19626727	19628024	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19628025	19632393	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19710915	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=intron:HG00642_ch_T0001290:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19710916	19710993	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001290;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001290;transcript_name=HG00642_ch_T0001290;gene_name=TTTY14;ID=exon:HG00642_ch_T0001290:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19502204	19776981	1000	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=HG00642_ch_T0001293;Name=TTTY14
HG00642_chrY	CAT	exon	19502204	19504494	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19504495	19513262	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519107	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519108	19519200	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519201	19519433	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19532644	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19532645	19532746	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19532747	19533404	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533405	19533567	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19533568	19535968	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19535969	19536054	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536055	19538400	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538401	19538521	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538522	19538830	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19576719	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632393	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776695	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=intron:HG00642_ch_T0001293:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776981	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001293;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001293;transcript_name=HG00642_ch_T0001293;gene_name=TTTY14;ID=exon:HG00642_ch_T0001293:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19502204	19776869	1000	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=HG00642_ch_T0001294;Name=TTTY14
HG00642_chrY	CAT	exon	19502204	19504494	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19504495	19519001	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519433	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19572095	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19572096	19572486	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19768374	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776695	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=intron:HG00642_ch_T0001294:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776869	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001294;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001294;transcript_name=HG00642_ch_T0001294;gene_name=TTTY14;ID=exon:HG00642_ch_T0001294:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19502206	19777024	1000	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=HG00642_ch_T0001295;Name=TTTY14
HG00642_chrY	CAT	exon	19502206	19504494	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19504495	19519001	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519107	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519108	19519200	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519201	19519433	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19535968	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19535969	19536058	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536059	19538830	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19632393	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776695	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=intron:HG00642_ch_T0001295:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777024	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001295;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001295;transcript_name=HG00642_ch_T0001295;gene_name=TTTY14;ID=exon:HG00642_ch_T0001295:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19502311	19776993	1000	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=HG00642_ch_T0001296;Name=TTTY14
HG00642_chrY	CAT	exon	19502311	19504494	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19504495	19513262	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519107	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519108	19519200	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519201	19519433	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19532644	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19532645	19532746	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19532747	19533404	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533405	19533567	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19533568	19535968	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19535969	19536058	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536059	19538830	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19539580	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19539581	19539786	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19539787	19548878	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19548879	19548938	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19548939	19550332	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19550333	19550561	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19550562	19576719	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19776695	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=intron:HG00642_ch_T0001296:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776993	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001296;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001296;transcript_name=HG00642_ch_T0001296;gene_name=TTTY14;ID=exon:HG00642_ch_T0001296:14;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19505682	19776873	1000	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=HG00642_ch_T0001297;Name=TTTY14
HG00642_chrY	CAT	exon	19505682	19507112	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19507113	19513262	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19513263	19513390	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19513391	19519001	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519002	19519107	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519108	19519200	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19519201	19519433	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19519434	19528227	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528228	19528362	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19528363	19530078	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19530079	19530282	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19530283	19532644	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19532645	19532746	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19532747	19533404	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533405	19536056	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536057	19538400	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538401	19538521	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538522	19538830	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:8;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19576719	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:9;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19741021	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:10;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19742998	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744313	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:11;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744314	19744347	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19744893	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:12;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744894	19744943	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744944	19776695	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=intron:HG00642_ch_T0001297:13;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776873	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001297;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001297;transcript_name=HG00642_ch_T0001297;gene_name=TTTY14;ID=exon:HG00642_ch_T0001297:14;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19535813	19539802	1000	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=HG00642_ch_T0001303;Name=TTTY14
HG00642_chrY	CAT	exon	19535813	19536054	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001303;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=exon:HG00642_ch_T0001303:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19536055	19538830	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001303;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=intron:HG00642_ch_T0001303:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001303;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=exon:HG00642_ch_T0001303:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19538963	19539580	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001303;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=intron:HG00642_ch_T0001303:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19539581	19539802	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001303;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001303;transcript_name=HG00642_ch_T0001303;gene_name=TTTY14;ID=exon:HG00642_ch_T0001303:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19577880	1000	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001306;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001306;gene_name=TTTY14;ID=HG00642_ch_T0001306;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001306;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001306;transcript_name=HG00642_ch_T0001306;gene_name=TTTY14;ID=exon:HG00642_ch_T0001306:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001306;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001306;transcript_name=HG00642_ch_T0001306;gene_name=TTTY14;ID=intron:HG00642_ch_T0001306:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19577880	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001306;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001306;transcript_name=HG00642_ch_T0001306;gene_name=TTTY14;ID=exon:HG00642_ch_T0001306:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775675	1000	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=HG00642_ch_T0001307;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19741021	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19741238	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19741239	19742814	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19742815	19742998	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744193	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744194	19744347	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19768374	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=intron:HG00642_ch_T0001307:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775675	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001307;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001307;transcript_name=HG00642_ch_T0001307;gene_name=TTTY14;ID=exon:HG00642_ch_T0001307:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755658	1000	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=HG00642_ch_T0001308;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=exon:HG00642_ch_T0001308:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=intron:HG00642_ch_T0001308:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=exon:HG00642_ch_T0001308:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632301	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=intron:HG00642_ch_T0001308:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632302	19632492	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=exon:HG00642_ch_T0001308:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19755526	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=intron:HG00642_ch_T0001308:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755658	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001308;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001308;transcript_name=HG00642_ch_T0001308;gene_name=TTTY14;ID=exon:HG00642_ch_T0001308:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19777041	1000	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=HG00642_ch_T0001309;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=exon:HG00642_ch_T0001309:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=intron:HG00642_ch_T0001309:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=exon:HG00642_ch_T0001309:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632393	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=intron:HG00642_ch_T0001309:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=exon:HG00642_ch_T0001309:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776918	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=intron:HG00642_ch_T0001309:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776919	19777041	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001309;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001309;transcript_name=HG00642_ch_T0001309;gene_name=TTTY14;ID=exon:HG00642_ch_T0001309:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775662	1000	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=HG00642_ch_T0001310;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=exon:HG00642_ch_T0001310:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=intron:HG00642_ch_T0001310:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=exon:HG00642_ch_T0001310:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632393	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=intron:HG00642_ch_T0001310:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=exon:HG00642_ch_T0001310:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19633007	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=intron:HG00642_ch_T0001310:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19633008	19633126	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=exon:HG00642_ch_T0001310:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19633127	19775591	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=intron:HG00642_ch_T0001310:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775662	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001310;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001310;transcript_name=HG00642_ch_T0001310;gene_name=TTTY14;ID=exon:HG00642_ch_T0001310:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775677	1000	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=HG00642_ch_T0001311;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=exon:HG00642_ch_T0001311:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=intron:HG00642_ch_T0001311:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=exon:HG00642_ch_T0001311:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19773149	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=intron:HG00642_ch_T0001311:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19773150	19773212	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=exon:HG00642_ch_T0001311:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19773213	19775591	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=intron:HG00642_ch_T0001311:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775677	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001311;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001311;transcript_name=HG00642_ch_T0001311;gene_name=TTTY14;ID=exon:HG00642_ch_T0001311:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775680	1000	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=HG00642_ch_T0001312;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=exon:HG00642_ch_T0001312:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=intron:HG00642_ch_T0001312:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=exon:HG00642_ch_T0001312:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632301	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=intron:HG00642_ch_T0001312:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632302	19632492	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=exon:HG00642_ch_T0001312:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=intron:HG00642_ch_T0001312:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=exon:HG00642_ch_T0001312:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=intron:HG00642_ch_T0001312:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775680	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001312;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001312;transcript_name=HG00642_ch_T0001312;gene_name=TTTY14;ID=exon:HG00642_ch_T0001312:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775758	1000	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=HG00642_ch_T0001313;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=exon:HG00642_ch_T0001313:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=intron:HG00642_ch_T0001313:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=exon:HG00642_ch_T0001313:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19768374	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=intron:HG00642_ch_T0001313:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=exon:HG00642_ch_T0001313:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=intron:HG00642_ch_T0001313:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775758	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001313;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001313;transcript_name=HG00642_ch_T0001313;gene_name=TTTY14;ID=exon:HG00642_ch_T0001313:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755879	1000	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=HG00642_ch_T0001314;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001314;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=exon:HG00642_ch_T0001314:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001314;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=intron:HG00642_ch_T0001314:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001314;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=exon:HG00642_ch_T0001314:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19755735	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001314;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=intron:HG00642_ch_T0001314:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755736	19755879	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001314;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001314;transcript_name=HG00642_ch_T0001314;gene_name=TTTY14;ID=exon:HG00642_ch_T0001314:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19777011	1000	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=HG00642_ch_T0001315;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=exon:HG00642_ch_T0001315:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=intron:HG00642_ch_T0001315:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=exon:HG00642_ch_T0001315:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19768374	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=intron:HG00642_ch_T0001315:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=exon:HG00642_ch_T0001315:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776918	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=intron:HG00642_ch_T0001315:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776919	19777011	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001315;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001315;transcript_name=HG00642_ch_T0001315;gene_name=TTTY14;ID=exon:HG00642_ch_T0001315:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775675	1000	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=HG00642_ch_T0001316;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001316;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=exon:HG00642_ch_T0001316:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001316;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=intron:HG00642_ch_T0001316:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001316;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=exon:HG00642_ch_T0001316:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19775591	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001316;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=intron:HG00642_ch_T0001316:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775675	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001316;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001316;transcript_name=HG00642_ch_T0001316;gene_name=TTTY14;ID=exon:HG00642_ch_T0001316:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755630	1000	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=HG00642_ch_T0001317;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=exon:HG00642_ch_T0001317:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=intron:HG00642_ch_T0001317:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=exon:HG00642_ch_T0001317:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632393	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=intron:HG00642_ch_T0001317:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=exon:HG00642_ch_T0001317:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19755526	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=intron:HG00642_ch_T0001317:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755630	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001317;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001317;transcript_name=HG00642_ch_T0001317;gene_name=TTTY14;ID=exon:HG00642_ch_T0001317:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755656	1000	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=HG00642_ch_T0001318;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=exon:HG00642_ch_T0001318:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=intron:HG00642_ch_T0001318:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=exon:HG00642_ch_T0001318:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19626726	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=intron:HG00642_ch_T0001318:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19626727	19626824	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=exon:HG00642_ch_T0001318:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19626825	19632393	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=intron:HG00642_ch_T0001318:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=exon:HG00642_ch_T0001318:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19755526	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=intron:HG00642_ch_T0001318:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755656	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001318;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001318;transcript_name=HG00642_ch_T0001318;gene_name=TTTY14;ID=exon:HG00642_ch_T0001318:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775671	1000	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=HG00642_ch_T0001319;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=exon:HG00642_ch_T0001319:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=intron:HG00642_ch_T0001319:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=exon:HG00642_ch_T0001319:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19632393	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=intron:HG00642_ch_T0001319:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=exon:HG00642_ch_T0001319:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19775591	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=intron:HG00642_ch_T0001319:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775671	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001319;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001319;transcript_name=HG00642_ch_T0001319;gene_name=TTTY14;ID=exon:HG00642_ch_T0001319:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755829	1000	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=HG00642_ch_T0001320;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001320;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=exon:HG00642_ch_T0001320:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001320;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=intron:HG00642_ch_T0001320:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001320;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=exon:HG00642_ch_T0001320:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19755616	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001320;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=intron:HG00642_ch_T0001320:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755617	19755829	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001320;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001320;transcript_name=HG00642_ch_T0001320;gene_name=TTTY14;ID=exon:HG00642_ch_T0001320:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19755895	1000	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=HG00642_ch_T0001321;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001321;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=exon:HG00642_ch_T0001321:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001321;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=intron:HG00642_ch_T0001321:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001321;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=exon:HG00642_ch_T0001321:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19755526	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001321;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=intron:HG00642_ch_T0001321:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755895	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001321;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001321;transcript_name=HG00642_ch_T0001321;gene_name=TTTY14;ID=exon:HG00642_ch_T0001321:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19777143	1000	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=HG00642_ch_T0001322;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001322;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=exon:HG00642_ch_T0001322:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001322;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=intron:HG00642_ch_T0001322:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001322;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=exon:HG00642_ch_T0001322:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19776695	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001322;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=intron:HG00642_ch_T0001322:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777143	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001322;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001322;transcript_name=HG00642_ch_T0001322;gene_name=TTTY14;ID=exon:HG00642_ch_T0001322:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572153	19775659	1000	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=HG00642_ch_T0001323;Name=TTTY14
HG00642_chrY	CAT	exon	19572153	19572486	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=exon:HG00642_ch_T0001323:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=intron:HG00642_ch_T0001323:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=exon:HG00642_ch_T0001323:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19768374	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=intron:HG00642_ch_T0001323:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=exon:HG00642_ch_T0001323:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19773149	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=intron:HG00642_ch_T0001323:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19773150	19773212	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=exon:HG00642_ch_T0001323:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19773213	19775591	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=intron:HG00642_ch_T0001323:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775659	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001323;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001323;transcript_name=HG00642_ch_T0001323;gene_name=TTTY14;ID=exon:HG00642_ch_T0001323:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572155	19775656	1000	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=HG00642_ch_T0001324;Name=TTTY14
HG00642_chrY	CAT	exon	19572155	19572486	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19576719	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19576720	19576857	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19612019	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19612020	19612134	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19612135	19632393	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19633007	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19633008	19633126	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19633127	19741021	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19741238	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19741239	19768374	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=intron:HG00642_ch_T0001324:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775656	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001324;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001324;transcript_name=HG00642_ch_T0001324;gene_name=TTTY14;ID=exon:HG00642_ch_T0001324:7;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19572159	19775649	1000	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=HG00642_ch_T0001325;Name=TTTY14
HG00642_chrY	CAT	exon	19572159	19572486	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=exon:HG00642_ch_T0001325:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19572487	19632393	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=intron:HG00642_ch_T0001325:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=exon:HG00642_ch_T0001325:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=intron:HG00642_ch_T0001325:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=exon:HG00642_ch_T0001325:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19773149	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=intron:HG00642_ch_T0001325:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19773150	19773212	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=exon:HG00642_ch_T0001325:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19773213	19775591	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=intron:HG00642_ch_T0001325:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775649	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001325;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001325;transcript_name=HG00642_ch_T0001325;gene_name=TTTY14;ID=exon:HG00642_ch_T0001325:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19576792	19579066	1000	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001326;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001326;gene_name=TTTY14;ID=HG00642_ch_T0001326;Name=TTTY14
HG00642_chrY	CAT	exon	19576792	19576857	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001326;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001326;transcript_name=HG00642_ch_T0001326;gene_name=TTTY14;ID=exon:HG00642_ch_T0001326:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19576858	19577021	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001326;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001326;transcript_name=HG00642_ch_T0001326;gene_name=TTTY14;ID=intron:HG00642_ch_T0001326:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19577022	19579066	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001326;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001326;transcript_name=HG00642_ch_T0001326;gene_name=TTTY14;ID=exon:HG00642_ch_T0001326:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19626179	19777016	1000	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=HG00642_ch_T0001327;Name=TTTY14
HG00642_chrY	CAT	exon	19626179	19628024	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001327;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=exon:HG00642_ch_T0001327:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19628025	19632393	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001327;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=intron:HG00642_ch_T0001327:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001327;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=exon:HG00642_ch_T0001327:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776695	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001327;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=intron:HG00642_ch_T0001327:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777016	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001327;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001327;transcript_name=HG00642_ch_T0001327;gene_name=TTTY14;ID=exon:HG00642_ch_T0001327:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19627657	19775660	1000	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=HG00642_ch_T0001328;Name=TTTY14
HG00642_chrY	CAT	exon	19627657	19628024	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001328;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=exon:HG00642_ch_T0001328:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19628025	19632393	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001328;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=intron:HG00642_ch_T0001328:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19632394	19632492	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001328;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=exon:HG00642_ch_T0001328:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19775591	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001328;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=intron:HG00642_ch_T0001328:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775660	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001328;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001328;transcript_name=HG00642_ch_T0001328;gene_name=TTTY14;ID=exon:HG00642_ch_T0001328:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19627718	19775658	1000	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=HG00642_ch_T0001329;Name=TTTY14
HG00642_chrY	CAT	exon	19627718	19628024	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001329;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=exon:HG00642_ch_T0001329:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19628025	19768374	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001329;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=intron:HG00642_ch_T0001329:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001329;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=exon:HG00642_ch_T0001329:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001329;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=intron:HG00642_ch_T0001329:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775658	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001329;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001329;transcript_name=HG00642_ch_T0001329;gene_name=TTTY14;ID=exon:HG00642_ch_T0001329:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19630122	19777034	1000	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=HG00642_ch_T0001330;Name=TTTY14
HG00642_chrY	CAT	exon	19630122	19632492	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=exon:HG00642_ch_T0001330:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=intron:HG00642_ch_T0001330:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=exon:HG00642_ch_T0001330:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19773149	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=intron:HG00642_ch_T0001330:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19773150	19773212	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=exon:HG00642_ch_T0001330:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19773213	19776695	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=intron:HG00642_ch_T0001330:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777034	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001330;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001330;transcript_name=HG00642_ch_T0001330;gene_name=TTTY14;ID=exon:HG00642_ch_T0001330:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19631658	19775771	1000	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=HG00642_ch_T0001331;Name=TTTY14
HG00642_chrY	CAT	exon	19631658	19632492	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001331;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=exon:HG00642_ch_T0001331:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001331;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=intron:HG00642_ch_T0001331:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001331;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=exon:HG00642_ch_T0001331:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001331;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=intron:HG00642_ch_T0001331:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775771	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001331;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001331;transcript_name=HG00642_ch_T0001331;gene_name=TTTY14;ID=exon:HG00642_ch_T0001331:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19631968	19775647	1000	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=HG00642_ch_T0001332;Name=TTTY14
HG00642_chrY	CAT	exon	19631968	19632492	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=exon:HG00642_ch_T0001332:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19744193	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=intron:HG00642_ch_T0001332:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744194	19744347	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=exon:HG00642_ch_T0001332:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19744893	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=intron:HG00642_ch_T0001332:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744894	19744943	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=exon:HG00642_ch_T0001332:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744944	19768374	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=intron:HG00642_ch_T0001332:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=exon:HG00642_ch_T0001332:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=intron:HG00642_ch_T0001332:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775647	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001332;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001332;transcript_name=HG00642_ch_T0001332;gene_name=TTTY14;ID=exon:HG00642_ch_T0001332:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19775658	1000	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=HG00642_ch_T0001333;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=exon:HG00642_ch_T0001333:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19633007	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=intron:HG00642_ch_T0001333:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19633008	19633126	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=exon:HG00642_ch_T0001333:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19633127	19768374	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=intron:HG00642_ch_T0001333:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=exon:HG00642_ch_T0001333:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=intron:HG00642_ch_T0001333:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775658	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001333;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001333;transcript_name=HG00642_ch_T0001333;gene_name=TTTY14;ID=exon:HG00642_ch_T0001333:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19777088	1000	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=HG00642_ch_T0001334;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001334;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=exon:HG00642_ch_T0001334:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001334;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=intron:HG00642_ch_T0001334:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001334;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=exon:HG00642_ch_T0001334:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776918	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001334;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=intron:HG00642_ch_T0001334:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776919	19777088	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001334;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001334;transcript_name=HG00642_ch_T0001334;gene_name=TTTY14;ID=exon:HG00642_ch_T0001334:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19775667	1000	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=HG00642_ch_T0001335;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001335;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=exon:HG00642_ch_T0001335:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19633007	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001335;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=intron:HG00642_ch_T0001335:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19633008	19633126	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001335;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=exon:HG00642_ch_T0001335:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19633127	19775591	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001335;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=intron:HG00642_ch_T0001335:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775667	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001335;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001335;transcript_name=HG00642_ch_T0001335;gene_name=TTTY14;ID=exon:HG00642_ch_T0001335:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19775662	1000	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=HG00642_ch_T0001336;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=exon:HG00642_ch_T0001336:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=intron:HG00642_ch_T0001336:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=exon:HG00642_ch_T0001336:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19773149	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=intron:HG00642_ch_T0001336:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19773150	19773212	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=exon:HG00642_ch_T0001336:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19773213	19775591	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=intron:HG00642_ch_T0001336:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775662	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001336;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001336;transcript_name=HG00642_ch_T0001336;gene_name=TTTY14;ID=exon:HG00642_ch_T0001336:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19755684	1000	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001337;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001337;gene_name=TTTY14;ID=HG00642_ch_T0001337;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001337;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001337;transcript_name=HG00642_ch_T0001337;gene_name=TTTY14;ID=exon:HG00642_ch_T0001337:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19755526	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001337;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001337;transcript_name=HG00642_ch_T0001337;gene_name=TTTY14;ID=intron:HG00642_ch_T0001337:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755684	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001337;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001337;transcript_name=HG00642_ch_T0001337;gene_name=TTTY14;ID=exon:HG00642_ch_T0001337:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632087	19777206	1000	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001338;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001338;gene_name=TTTY14;ID=HG00642_ch_T0001338;Name=TTTY14
HG00642_chrY	CAT	exon	19632087	19632492	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001338;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001338;transcript_name=HG00642_ch_T0001338;gene_name=TTTY14;ID=exon:HG00642_ch_T0001338:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776918	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001338;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001338;transcript_name=HG00642_ch_T0001338;gene_name=TTTY14;ID=intron:HG00642_ch_T0001338:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776919	19777206	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001338;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001338;transcript_name=HG00642_ch_T0001338;gene_name=TTTY14;ID=exon:HG00642_ch_T0001338:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632345	19755887	1000	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001339;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001339;gene_name=TTTY14;ID=HG00642_ch_T0001339;Name=TTTY14
HG00642_chrY	CAT	exon	19632345	19632492	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001339;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001339;transcript_name=HG00642_ch_T0001339;gene_name=TTTY14;ID=exon:HG00642_ch_T0001339:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19755616	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001339;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001339;transcript_name=HG00642_ch_T0001339;gene_name=TTTY14;ID=intron:HG00642_ch_T0001339:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755617	19755887	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001339;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001339;transcript_name=HG00642_ch_T0001339;gene_name=TTTY14;ID=exon:HG00642_ch_T0001339:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632347	19776779	1000	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=HG00642_ch_T0001340;Name=TTTY14
HG00642_chrY	CAT	exon	19632347	19632492	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001340;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=exon:HG00642_ch_T0001340:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19768374	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001340;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=intron:HG00642_ch_T0001340:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001340;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=exon:HG00642_ch_T0001340:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776695	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001340;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=intron:HG00642_ch_T0001340:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776779	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001340;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001340;transcript_name=HG00642_ch_T0001340;gene_name=TTTY14;ID=exon:HG00642_ch_T0001340:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632347	19777067	1000	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001341;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001341;gene_name=TTTY14;ID=HG00642_ch_T0001341;Name=TTTY14
HG00642_chrY	CAT	exon	19632347	19632492	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001341;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001341;transcript_name=HG00642_ch_T0001341;gene_name=TTTY14;ID=exon:HG00642_ch_T0001341:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19776695	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001341;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001341;transcript_name=HG00642_ch_T0001341;gene_name=TTTY14;ID=intron:HG00642_ch_T0001341:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777067	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001341;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001341;transcript_name=HG00642_ch_T0001341;gene_name=TTTY14;ID=exon:HG00642_ch_T0001341:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632350	19775656	1000	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=HG00642_ch_T0001342;Name=TTTY14
HG00642_chrY	CAT	exon	19632350	19632492	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19741021	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=intron:HG00642_ch_T0001342:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19741022	19741238	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19741239	19742814	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=intron:HG00642_ch_T0001342:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19742815	19742998	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744193	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=intron:HG00642_ch_T0001342:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744194	19744347	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19768374	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=intron:HG00642_ch_T0001342:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=intron:HG00642_ch_T0001342:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775656	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001342;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001342;transcript_name=HG00642_ch_T0001342;gene_name=TTTY14;ID=exon:HG00642_ch_T0001342:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632350	19776758	1000	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=HG00642_ch_T0001343;Name=TTTY14
HG00642_chrY	CAT	exon	19632350	19632492	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001343;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=exon:HG00642_ch_T0001343:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19642085	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001343;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=intron:HG00642_ch_T0001343:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19642086	19642198	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001343;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=exon:HG00642_ch_T0001343:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19642199	19776695	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001343;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=intron:HG00642_ch_T0001343:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19776758	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001343;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001343;transcript_name=HG00642_ch_T0001343;gene_name=TTTY14;ID=exon:HG00642_ch_T0001343:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632350	19775656	1000	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=HG00642_ch_T0001344;Name=TTTY14
HG00642_chrY	CAT	exon	19632350	19632492	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=exon:HG00642_ch_T0001344:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19682374	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=intron:HG00642_ch_T0001344:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19682375	19682498	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=exon:HG00642_ch_T0001344:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19682499	19768374	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=intron:HG00642_ch_T0001344:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=exon:HG00642_ch_T0001344:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19775591	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=intron:HG00642_ch_T0001344:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775656	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001344;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001344;transcript_name=HG00642_ch_T0001344;gene_name=TTTY14;ID=exon:HG00642_ch_T0001344:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632350	19775659	1000	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001345;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001345;gene_name=TTTY14;ID=HG00642_ch_T0001345;Name=TTTY14
HG00642_chrY	CAT	exon	19632350	19632492	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001345;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001345;transcript_name=HG00642_ch_T0001345;gene_name=TTTY14;ID=exon:HG00642_ch_T0001345:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19775591	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001345;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001345;transcript_name=HG00642_ch_T0001345;gene_name=TTTY14;ID=intron:HG00642_ch_T0001345:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775592	19775659	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001345;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001345;transcript_name=HG00642_ch_T0001345;gene_name=TTTY14;ID=exon:HG00642_ch_T0001345:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19632350	19755634	1000	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=HG00642_ch_T0001346;Name=TTTY14
HG00642_chrY	CAT	exon	19632350	19632492	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001346;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=exon:HG00642_ch_T0001346:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19632493	19633007	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001346;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=intron:HG00642_ch_T0001346:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19633008	19633126	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001346;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=exon:HG00642_ch_T0001346:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19633127	19755526	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001346;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=intron:HG00642_ch_T0001346:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19755527	19755634	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001346;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001346;transcript_name=HG00642_ch_T0001346;gene_name=TTTY14;ID=exon:HG00642_ch_T0001346:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19739892	19744318	1000	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001350;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001350;gene_name=TTTY14;ID=HG00642_ch_T0001350;Name=TTTY14
HG00642_chrY	CAT	exon	19739892	19742998	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001350;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001350;transcript_name=HG00642_ch_T0001350;gene_name=TTTY14;ID=exon:HG00642_ch_T0001350:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744193	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001350;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001350;transcript_name=HG00642_ch_T0001350;gene_name=TTTY14;ID=intron:HG00642_ch_T0001350:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744194	19744318	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001350;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001350;transcript_name=HG00642_ch_T0001350;gene_name=TTTY14;ID=exon:HG00642_ch_T0001350:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19741150	19777046	1000	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=HG00642_ch_T0001351;Name=TTTY14
HG00642_chrY	CAT	exon	19741150	19741238	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19741239	19742814	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19742815	19742998	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19742999	19744313	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:1;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744314	19744347	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744348	19744893	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:2;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19744894	19744940	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19744941	19748424	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:3;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19748425	19748564	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19748565	19768374	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:4;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19768375	19768449	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19768450	19776695	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=intron:HG00642_ch_T0001351:5;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19776696	19777046	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001351;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001351;transcript_name=HG00642_ch_T0001351;gene_name=TTTY14;ID=exon:HG00642_ch_T0001351:6;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19776597	19777067	1000	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001354;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_G0000449;transcript_name=HG00642_ch_T0001354;gene_name=TTTY14;ID=HG00642_ch_T0001354;Name=TTTY14
HG00642_chrY	CAT	exon	19776597	19777067	.	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG00642_ch_T0001354;gene_id=HG00642_ch_G0000449;Parent=HG00642_ch_T0001354;transcript_name=HG00642_ch_T0001354;gene_name=TTTY14;ID=exon:HG00642_ch_T0001354:0;Name=TTTY14;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19475926	19479074	.	-	.	source_gene_common_name=USP9YP2;source_gene=ENSG00000249501.1;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;gene_id=HG00642_ch_G0000450;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP2;gene_sources=liftoff;ID=HG00642_ch_G0000450;Name=USP9YP2
HG00642_chrY	CAT	transcript	19475926	19479074	1000	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_G0000450;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=HG00642_ch_T0001291;Name=USP9YP2
HG00642_chrY	CAT	exon	19475926	19476050	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_T0001291;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=exon:HG00642_ch_T0001291:0;Name=USP9YP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19476051	19476462	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_T0001291;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=intron:HG00642_ch_T0001291:0;Name=USP9YP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19476463	19477208	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_T0001291;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=exon:HG00642_ch_T0001291:1;Name=USP9YP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19477209	19478945	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_T0001291;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=intron:HG00642_ch_T0001291:1;Name=USP9YP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19478946	19479074	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG00642_ch_T0001291;gene_id=HG00642_ch_G0000450;Parent=HG00642_ch_T0001291;transcript_name=HG00642_ch_T0001291;gene_name=USP9YP2;ID=exon:HG00642_ch_T0001291:2;Name=USP9YP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19487397	19487727	.	+	.	source_gene_common_name=ELOCP14;source_gene=ENSG00000228193.1;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;gene_id=HG00642_ch_G0000451;gene_biotype=processed_pseudogene;gene_name=ELOCP14;gene_sources=liftoff;ID=HG00642_ch_G0000451;Name=ELOCP14
HG00642_chrY	CAT	transcript	19487397	19487727	1000	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG00642_ch_T0001292;gene_id=HG00642_ch_G0000451;Parent=HG00642_ch_G0000451;transcript_name=HG00642_ch_T0001292;gene_name=ELOCP14;ID=HG00642_ch_T0001292;Name=ELOCP14
HG00642_chrY	CAT	exon	19487397	19487727	.	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG00642_ch_T0001292;gene_id=HG00642_ch_G0000451;Parent=HG00642_ch_T0001292;transcript_name=HG00642_ch_T0001292;gene_name=ELOCP14;ID=exon:HG00642_ch_T0001292:0;Name=ELOCP14;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19510985	19511476	.	-	.	source_gene_common_name=XKRYP2;source_gene=ENSG00000230904.1;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;gene_id=HG00642_ch_G0000452;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP2;gene_sources=liftoff;ID=HG00642_ch_G0000452;Name=XKRYP2
HG00642_chrY	CAT	transcript	19510985	19511476	1000	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG00642_ch_T0001298;gene_id=HG00642_ch_G0000452;Parent=HG00642_ch_G0000452;transcript_name=HG00642_ch_T0001298;gene_name=XKRYP2;ID=HG00642_ch_T0001298;Name=XKRYP2
HG00642_chrY	CAT	exon	19510985	19511476	.	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG00642_ch_T0001298;gene_id=HG00642_ch_G0000452;Parent=HG00642_ch_T0001298;transcript_name=HG00642_ch_T0001298;gene_name=XKRYP2;ID=exon:HG00642_ch_T0001298:0;Name=XKRYP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19525758	19529130	.	+	.	source_gene_common_name=USP9YP10;source_gene=ENSG00000238135.1;alternative_source_transcripts=ENST00000454868.1;gene_id=HG00642_ch_G0000453;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP10;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000453;Name=USP9YP10
HG00642_chrY	CAT	transcript	19525758	19529130	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_G0000453;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=HG00642_ch_T0001299;Name=USP9YP10
HG00642_chrY	CAT	exon	19525758	19525978	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001299;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001299:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19525979	19526747	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001299;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=intron:HG00642_ch_T0001299:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19526748	19527035	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001299;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001299:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19527036	19528941	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001299;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=intron:HG00642_ch_T0001299:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528942	19529130	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=HG00642_ch_T0001299;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001299;transcript_name=HG00642_ch_T0001299;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001299:2;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19525758	19529130	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_G0000453;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=HG00642_ch_T0001300;Name=USP9YP10
HG00642_chrY	CAT	exon	19525758	19525978	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001300:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19525979	19526747	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=intron:HG00642_ch_T0001300:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19526748	19526871	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001300:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19526872	19526941	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=intron:HG00642_ch_T0001300:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19526942	19527035	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001300:2;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19527036	19528941	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=intron:HG00642_ch_T0001300:2;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19528942	19529130	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=298.726;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00642_ch_T0001300;gene_id=HG00642_ch_G0000453;Parent=HG00642_ch_T0001300;transcript_name=HG00642_ch_T0001300;gene_name=USP9YP10;ID=exon:HG00642_ch_T0001300:3;Name=USP9YP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19532645	19538962	.	-	.	source_gene_common_name=USP9YP28;source_gene=ENSG00000224151.1;gene_id=HG00642_ch_G0000454;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP28;gene_sources=liftoff;ID=HG00642_ch_G0000454;Name=USP9YP28
HG00642_chrY	CAT	transcript	19532645	19538962	1000	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_G0000454;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=HG00642_ch_T0001301;Name=USP9YP28
HG00642_chrY	CAT	exon	19532645	19532740	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=exon:HG00642_ch_T0001301:0;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19532741	19533117	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=intron:HG00642_ch_T0001301:0;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533118	19533292	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=exon:HG00642_ch_T0001301:1;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19533293	19533538	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=intron:HG00642_ch_T0001301:1;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533539	19533567	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=exon:HG00642_ch_T0001301:2;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19533568	19533699	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=intron:HG00642_ch_T0001301:2;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19533700	19533856	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=exon:HG00642_ch_T0001301:3;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19533857	19538830	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=intron:HG00642_ch_T0001301:3;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19538831	19538962	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG00642_ch_T0001301;gene_id=HG00642_ch_G0000454;Parent=HG00642_ch_T0001301;transcript_name=HG00642_ch_T0001301;gene_name=USP9YP28;ID=exon:HG00642_ch_T0001301:4;Name=USP9YP28;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19533378	19533539	.	-	.	source_gene_common_name=RNU1-41P;source_gene=ENSG00000251970.1;gene_id=HG00642_ch_G0000455;gene_biotype=snRNA;gene_name=RNU1-41P;gene_sources=liftoff;ID=HG00642_ch_G0000455;Name=RNU1-41P
HG00642_chrY	CAT	transcript	19533378	19533539	1000	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG00642_ch_T0001302;gene_id=HG00642_ch_G0000455;Parent=HG00642_ch_G0000455;transcript_name=HG00642_ch_T0001302;gene_name=RNU1-41P;ID=HG00642_ch_T0001302;Name=RNU1-41P
HG00642_chrY	CAT	exon	19533378	19533539	.	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG00642_ch_T0001302;gene_id=HG00642_ch_G0000455;Parent=HG00642_ch_T0001302;transcript_name=HG00642_ch_T0001302;gene_name=RNU1-41P;ID=exon:HG00642_ch_T0001302:0;Name=RNU1-41P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19547918	19566932	.	+	.	source_gene_common_name=OFD1P7Y;source_gene=ENSG00000238088.1;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;gene_id=HG00642_ch_G0000456;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P7Y;gene_sources=liftoff;ID=HG00642_ch_G0000456;Name=OFD1P7Y
HG00642_chrY	CAT	transcript	19547918	19566932	1000	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_G0000456;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=HG00642_ch_T0001304;Name=OFD1P7Y
HG00642_chrY	CAT	exon	19547918	19547989	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19547990	19549182	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19549183	19549383	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19549384	19551604	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19551605	19551669	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19551670	19551756	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19551757	19551786	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19551787	19556000	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19556001	19556137	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19556138	19556485	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19556486	19556601	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19556602	19559711	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19559712	19559818	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19559819	19561986	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19561987	19562104	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19562105	19563885	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19563886	19563953	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19563954	19565065	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19565066	19565165	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19565166	19566791	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=intron:HG00642_ch_T0001304:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19566792	19566932	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00642_ch_T0001304;gene_id=HG00642_ch_G0000456;Parent=HG00642_ch_T0001304;transcript_name=HG00642_ch_T0001304;gene_name=OFD1P7Y;ID=exon:HG00642_ch_T0001304:10;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19571754	19571924	.	+	.	source_gene_common_name=MTCYBP2;source_gene=ENSG00000217179.1;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;gene_id=HG00642_ch_G0000457;gene_biotype=processed_pseudogene;gene_name=MTCYBP2;gene_sources=liftoff;ID=HG00642_ch_G0000457;Name=MTCYBP2
HG00642_chrY	CAT	transcript	19571754	19571924	1000	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG00642_ch_T0001305;gene_id=HG00642_ch_G0000457;Parent=HG00642_ch_G0000457;transcript_name=HG00642_ch_T0001305;gene_name=MTCYBP2;ID=HG00642_ch_T0001305;Name=MTCYBP2
HG00642_chrY	CAT	exon	19571754	19571924	.	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG00642_ch_T0001305;gene_id=HG00642_ch_G0000457;Parent=HG00642_ch_T0001305;transcript_name=HG00642_ch_T0001305;gene_name=MTCYBP2;ID=exon:HG00642_ch_T0001305:0;Name=MTCYBP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19684826	19686049	.	+	.	source_gene_common_name=ZNF839P1;source_gene=ENSG00000217896.2;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;gene_id=HG00642_ch_G0000458;gene_biotype=processed_pseudogene;gene_name=ZNF839P1;gene_sources=liftoff;ID=HG00642_ch_G0000458;Name=ZNF839P1
HG00642_chrY	CAT	transcript	19684826	19686049	1000	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00642_ch_T0001347;gene_id=HG00642_ch_G0000458;Parent=HG00642_ch_G0000458;transcript_name=HG00642_ch_T0001347;gene_name=ZNF839P1;ID=HG00642_ch_T0001347;Name=ZNF839P1
HG00642_chrY	CAT	exon	19684826	19685505	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00642_ch_T0001347;gene_id=HG00642_ch_G0000458;Parent=HG00642_ch_T0001347;transcript_name=HG00642_ch_T0001347;gene_name=ZNF839P1;ID=exon:HG00642_ch_T0001347:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19685506	19685868	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00642_ch_T0001347;gene_id=HG00642_ch_G0000458;Parent=HG00642_ch_T0001347;transcript_name=HG00642_ch_T0001347;gene_name=ZNF839P1;ID=intron:HG00642_ch_T0001347:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19685869	19686049	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00642_ch_T0001347;gene_id=HG00642_ch_G0000458;Parent=HG00642_ch_T0001347;transcript_name=HG00642_ch_T0001347;gene_name=ZNF839P1;ID=exon:HG00642_ch_T0001347:1;Name=ZNF839P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19692118	19692360	.	-	.	source_gene_common_name=CD24P4;source_gene=ENSG00000185275.6;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;gene_id=HG00642_ch_G0000459;gene_biotype=processed_pseudogene;gene_name=CD24P4;gene_sources=liftoff;ID=HG00642_ch_G0000459;Name=CD24P4
HG00642_chrY	CAT	transcript	19692118	19692360	1000	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG00642_ch_T0001348;gene_id=HG00642_ch_G0000459;Parent=HG00642_ch_G0000459;transcript_name=HG00642_ch_T0001348;gene_name=CD24P4;ID=HG00642_ch_T0001348;Name=CD24P4
HG00642_chrY	CAT	exon	19692118	19692360	.	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG00642_ch_T0001348;gene_id=HG00642_ch_G0000459;Parent=HG00642_ch_T0001348;transcript_name=HG00642_ch_T0001348;gene_name=CD24P4;ID=exon:HG00642_ch_T0001348:0;Name=CD24P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19718634	19718738	.	-	.	source_gene_common_name=RNU6-255P;source_gene=ENSG00000252766.1;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;gene_id=HG00642_ch_G0000460;gene_biotype=snRNA;gene_name=RNU6-255P;gene_sources=liftoff;ID=HG00642_ch_G0000460;Name=RNU6-255P
HG00642_chrY	CAT	transcript	19718634	19718738	1000	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG00642_ch_T0001349;gene_id=HG00642_ch_G0000460;Parent=HG00642_ch_G0000460;transcript_name=HG00642_ch_T0001349;gene_name=RNU6-255P;ID=HG00642_ch_T0001349;Name=RNU6-255P
HG00642_chrY	CAT	exon	19718634	19718738	.	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG00642_ch_T0001349;gene_id=HG00642_ch_G0000460;Parent=HG00642_ch_T0001349;transcript_name=HG00642_ch_T0001349;gene_name=RNU6-255P;ID=exon:HG00642_ch_T0001349:0;Name=RNU6-255P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19775785	19786712	.	+	.	source_gene_common_name=ENSG00000310485;source_gene=ENSG00000310485.1;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;gene_id=HG00642_ch_G0000461;gene_biotype=lncRNA;gene_name=ENSG00000310485;gene_sources=liftoff;ID=HG00642_ch_G0000461;Name=ENSG00000310485
HG00642_chrY	CAT	transcript	19775785	19786712	1000	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00642_ch_T0001352;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_G0000461;transcript_name=HG00642_ch_T0001352;gene_name=ENSG00000310485;ID=HG00642_ch_T0001352;Name=ENSG00000310485
HG00642_chrY	CAT	exon	19775785	19775908	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00642_ch_T0001352;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001352;transcript_name=HG00642_ch_T0001352;gene_name=ENSG00000310485;ID=exon:HG00642_ch_T0001352:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19775909	19786150	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00642_ch_T0001352;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001352;transcript_name=HG00642_ch_T0001352;gene_name=ENSG00000310485;ID=intron:HG00642_ch_T0001352:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19786151	19786712	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00642_ch_T0001352;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001352;transcript_name=HG00642_ch_T0001352;gene_name=ENSG00000310485;ID=exon:HG00642_ch_T0001352:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	19775832	19776168	1000	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00642_ch_T0001353;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_G0000461;transcript_name=HG00642_ch_T0001353;gene_name=ENSG00000310485;ID=HG00642_ch_T0001353;Name=ENSG00000310485
HG00642_chrY	CAT	exon	19775832	19775908	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00642_ch_T0001353;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001353;transcript_name=HG00642_ch_T0001353;gene_name=ENSG00000310485;ID=exon:HG00642_ch_T0001353:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19775909	19775996	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00642_ch_T0001353;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001353;transcript_name=HG00642_ch_T0001353;gene_name=ENSG00000310485;ID=intron:HG00642_ch_T0001353:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19775997	19776168	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00642_ch_T0001353;gene_id=HG00642_ch_G0000461;Parent=HG00642_ch_T0001353;transcript_name=HG00642_ch_T0001353;gene_name=ENSG00000310485;ID=exon:HG00642_ch_T0001353:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	19953639	19960554	.	-	.	source_gene_common_name=ENSG00000274282;source_gene=ENSG00000274282.1;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;gene_id=HG00642_ch_G0000462;gene_biotype=processed_pseudogene;gene_name=ENSG00000274282;gene_sources=liftoff;ID=HG00642_ch_G0000462;Name=ENSG00000274282
HG00642_chrY	CAT	transcript	19953639	19960554	1000	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00642_ch_T0001355;gene_id=HG00642_ch_G0000462;Parent=HG00642_ch_G0000462;transcript_name=HG00642_ch_T0001355;gene_name=ENSG00000274282;ID=HG00642_ch_T0001355;Name=ENSG00000274282
HG00642_chrY	CAT	exon	19953639	19954131	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00642_ch_T0001355;gene_id=HG00642_ch_G0000462;Parent=HG00642_ch_T0001355;transcript_name=HG00642_ch_T0001355;gene_name=ENSG00000274282;ID=exon:HG00642_ch_T0001355:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	19954132	19960205	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00642_ch_T0001355;gene_id=HG00642_ch_G0000462;Parent=HG00642_ch_T0001355;transcript_name=HG00642_ch_T0001355;gene_name=ENSG00000274282;ID=intron:HG00642_ch_T0001355:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	19960206	19960554	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00642_ch_T0001355;gene_id=HG00642_ch_G0000462;Parent=HG00642_ch_T0001355;transcript_name=HG00642_ch_T0001355;gene_name=ENSG00000274282;ID=exon:HG00642_ch_T0001355:1;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20027250	20028254	.	+	.	source_gene_common_name=GAPDHP19;source_gene=ENSG00000234529.2;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;gene_id=HG00642_ch_G0000463;gene_biotype=processed_pseudogene;gene_name=GAPDHP19;gene_sources=liftoff;ID=HG00642_ch_G0000463;Name=GAPDHP19
HG00642_chrY	CAT	transcript	20027250	20028254	1000	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG00642_ch_T0001356;gene_id=HG00642_ch_G0000463;Parent=HG00642_ch_G0000463;transcript_name=HG00642_ch_T0001356;gene_name=GAPDHP19;ID=HG00642_ch_T0001356;Name=GAPDHP19
HG00642_chrY	CAT	exon	20027250	20028254	.	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG00642_ch_T0001356;gene_id=HG00642_ch_G0000463;Parent=HG00642_ch_T0001356;transcript_name=HG00642_ch_T0001356;gene_name=GAPDHP19;ID=exon:HG00642_ch_T0001356:0;Name=GAPDHP19;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20155095	20266949	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000291031.2;gene_id=HG00642_ch_G0000464;gene_biotype=lncRNA;gene_name=BCORP1;gene_sources=liftoff;ID=HG00642_ch_G0000464;Name=BCORP1
HG00642_chrY	CAT	transcript	20155095	20202845	1000	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=HG00642_ch_T0001357;Name=BCORP1
HG00642_chrY	CAT	exon	20155095	20156528	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20156529	20158592	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158593	20158748	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20158749	20158957	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158958	20159035	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159036	20164774	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20164775	20164896	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20164897	20166124	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20166125	20167043	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20167044	20173573	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20173574	20173813	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20173814	20174308	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20174309	20174572	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20174573	20179837	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20179838	20179963	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20179964	20202700	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=intron:HG00642_ch_T0001357:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20202701	20202845	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001357;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001357;transcript_name=HG00642_ch_T0001357;gene_name=BCORP1;ID=exon:HG00642_ch_T0001357:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20155976	20202805	1000	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=HG00642_ch_T0001358;Name=BCORP1
HG00642_chrY	CAT	exon	20155976	20156528	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20156529	20156720	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20156721	20156781	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20156782	20158592	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158593	20158748	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20158749	20158957	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158958	20159035	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159036	20159627	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20159628	20159773	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159774	20164774	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20164775	20164896	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20164897	20166124	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20166125	20167043	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20167044	20173573	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20173574	20173813	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20173814	20174308	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20174309	20174572	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20174573	20179837	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20179838	20179963	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:9;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20179964	20202700	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=intron:HG00642_ch_T0001358:9;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20202701	20202805	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001358;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001358;transcript_name=HG00642_ch_T0001358;gene_name=BCORP1;ID=exon:HG00642_ch_T0001358:10;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20156058	20266761	1000	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=HG00642_ch_T0001359;Name=BCORP1
HG00642_chrY	CAT	exon	20156058	20156528	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20156529	20158592	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158593	20158748	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20158749	20158957	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158958	20159035	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159036	20159627	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20159628	20159773	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159774	20164774	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20164775	20164896	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20164897	20166124	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20166125	20167043	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20167044	20173573	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20173574	20173813	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20173814	20174308	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20174309	20174572	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20174573	20179837	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20179838	20179963	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20179964	20266650	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=intron:HG00642_ch_T0001359:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266761	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001359;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001359;transcript_name=HG00642_ch_T0001359;gene_name=BCORP1;ID=exon:HG00642_ch_T0001359:9;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20157693	20159773	1000	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=HG00642_ch_T0001361;Name=BCORP1
HG00642_chrY	CAT	exon	20157693	20158748	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001361;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=exon:HG00642_ch_T0001361:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20158749	20158957	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001361;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=intron:HG00642_ch_T0001361:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158958	20159035	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001361;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=exon:HG00642_ch_T0001361:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159036	20159627	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001361;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=intron:HG00642_ch_T0001361:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20159628	20159773	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001361;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001361;transcript_name=HG00642_ch_T0001361;gene_name=BCORP1;ID=exon:HG00642_ch_T0001361:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20236712	20266699	1000	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=HG00642_ch_T0001362;Name=BCORP1
HG00642_chrY	CAT	exon	20236712	20236876	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=exon:HG00642_ch_T0001362:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20236877	20239259	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=intron:HG00642_ch_T0001362:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239260	20239486	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=exon:HG00642_ch_T0001362:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20257708	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=intron:HG00642_ch_T0001362:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=exon:HG00642_ch_T0001362:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=intron:HG00642_ch_T0001362:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266699	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001362;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001362;transcript_name=HG00642_ch_T0001362;gene_name=BCORP1;ID=exon:HG00642_ch_T0001362:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20236713	20266676	1000	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=HG00642_ch_T0001363;Name=BCORP1
HG00642_chrY	CAT	exon	20236713	20236876	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20236877	20239259	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=intron:HG00642_ch_T0001363:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239260	20239486	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20239854	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=intron:HG00642_ch_T0001363:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239855	20239966	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239967	20257708	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=intron:HG00642_ch_T0001363:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=intron:HG00642_ch_T0001363:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=intron:HG00642_ch_T0001363:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266676	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001363;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001363;transcript_name=HG00642_ch_T0001363;gene_name=BCORP1;ID=exon:HG00642_ch_T0001363:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239101	20266713	1000	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=HG00642_ch_T0001364;Name=BCORP1
HG00642_chrY	CAT	exon	20239101	20239486	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=exon:HG00642_ch_T0001364:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20239854	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=intron:HG00642_ch_T0001364:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239855	20239966	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=exon:HG00642_ch_T0001364:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239967	20257692	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=intron:HG00642_ch_T0001364:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=exon:HG00642_ch_T0001364:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=intron:HG00642_ch_T0001364:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001364;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001364;transcript_name=HG00642_ch_T0001364;gene_name=BCORP1;ID=exon:HG00642_ch_T0001364:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239104	20266699	1000	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=HG00642_ch_T0001365;Name=BCORP1
HG00642_chrY	CAT	exon	20239104	20239486	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001365;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=exon:HG00642_ch_T0001365:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20257708	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001365;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=intron:HG00642_ch_T0001365:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001365;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=exon:HG00642_ch_T0001365:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001365;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=intron:HG00642_ch_T0001365:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266699	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001365;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001365;transcript_name=HG00642_ch_T0001365;gene_name=BCORP1;ID=exon:HG00642_ch_T0001365:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239153	20266678	1000	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=HG00642_ch_T0001366;Name=BCORP1
HG00642_chrY	CAT	exon	20239153	20239486	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=exon:HG00642_ch_T0001366:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20239886	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=intron:HG00642_ch_T0001366:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239887	20239966	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=exon:HG00642_ch_T0001366:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239967	20257708	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=intron:HG00642_ch_T0001366:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=exon:HG00642_ch_T0001366:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=intron:HG00642_ch_T0001366:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001366;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001366;transcript_name=HG00642_ch_T0001366;gene_name=BCORP1;ID=exon:HG00642_ch_T0001366:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239208	20266695	1000	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=HG00642_ch_T0001367;Name=BCORP1
HG00642_chrY	CAT	exon	20239208	20239486	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001367;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=exon:HG00642_ch_T0001367:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20239854	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001367;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=intron:HG00642_ch_T0001367:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20239855	20239966	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001367;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=exon:HG00642_ch_T0001367:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239967	20266650	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001367;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=intron:HG00642_ch_T0001367:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266695	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001367;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001367;transcript_name=HG00642_ch_T0001367;gene_name=BCORP1;ID=exon:HG00642_ch_T0001367:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239235	20266678	1000	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=HG00642_ch_T0001368;Name=BCORP1
HG00642_chrY	CAT	exon	20239235	20239486	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001368;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=exon:HG00642_ch_T0001368:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239487	20257692	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001368;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=intron:HG00642_ch_T0001368:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001368;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=exon:HG00642_ch_T0001368:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001368;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=intron:HG00642_ch_T0001368:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001368;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001368;transcript_name=HG00642_ch_T0001368;gene_name=BCORP1;ID=exon:HG00642_ch_T0001368:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20239575	20266717	1000	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=HG00642_ch_T0001369;Name=BCORP1
HG00642_chrY	CAT	exon	20239575	20239966	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001369;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=exon:HG00642_ch_T0001369:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20239967	20257708	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001369;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=intron:HG00642_ch_T0001369:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001369;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=exon:HG00642_ch_T0001369:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001369;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=intron:HG00642_ch_T0001369:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266717	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001369;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001369;transcript_name=HG00642_ch_T0001369;gene_name=BCORP1;ID=exon:HG00642_ch_T0001369:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20253595	20266720	1000	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=HG00642_ch_T0001370;Name=BCORP1
HG00642_chrY	CAT	exon	20253595	20256481	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=exon:HG00642_ch_T0001370:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256482	20256898	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=intron:HG00642_ch_T0001370:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=exon:HG00642_ch_T0001370:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=intron:HG00642_ch_T0001370:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=exon:HG00642_ch_T0001370:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=intron:HG00642_ch_T0001370:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266720	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001370;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001370;transcript_name=HG00642_ch_T0001370;gene_name=BCORP1;ID=exon:HG00642_ch_T0001370:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20254545	20266937	1000	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=HG00642_ch_T0001371;Name=BCORP1
HG00642_chrY	CAT	exon	20254545	20255223	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=exon:HG00642_ch_T0001371:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=intron:HG00642_ch_T0001371:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=exon:HG00642_ch_T0001371:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=intron:HG00642_ch_T0001371:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=exon:HG00642_ch_T0001371:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=intron:HG00642_ch_T0001371:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266937	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001371;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001371;transcript_name=HG00642_ch_T0001371;gene_name=BCORP1;ID=exon:HG00642_ch_T0001371:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255055	20266924	1000	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=HG00642_ch_T0001372;Name=BCORP1
HG00642_chrY	CAT	exon	20255055	20255223	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=exon:HG00642_ch_T0001372:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=intron:HG00642_ch_T0001372:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=exon:HG00642_ch_T0001372:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=intron:HG00642_ch_T0001372:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=exon:HG00642_ch_T0001372:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=intron:HG00642_ch_T0001372:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266924	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001372;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001372;transcript_name=HG00642_ch_T0001372;gene_name=BCORP1;ID=exon:HG00642_ch_T0001372:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255057	20266933	1000	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=HG00642_ch_T0001373;Name=BCORP1
HG00642_chrY	CAT	exon	20255057	20255223	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001373;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=exon:HG00642_ch_T0001373:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257692	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001373;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=intron:HG00642_ch_T0001373:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001373;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=exon:HG00642_ch_T0001373:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001373;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=intron:HG00642_ch_T0001373:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266933	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001373;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001373;transcript_name=HG00642_ch_T0001373;gene_name=BCORP1;ID=exon:HG00642_ch_T0001373:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255057	20266933	1000	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=HG00642_ch_T0001374;Name=BCORP1
HG00642_chrY	CAT	exon	20255057	20255223	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001374;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=exon:HG00642_ch_T0001374:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001374;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=intron:HG00642_ch_T0001374:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001374;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=exon:HG00642_ch_T0001374:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001374;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=intron:HG00642_ch_T0001374:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266933	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001374;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001374;transcript_name=HG00642_ch_T0001374;gene_name=BCORP1;ID=exon:HG00642_ch_T0001374:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266699	1000	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=HG00642_ch_T0001375;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=exon:HG00642_ch_T0001375:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255679	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=intron:HG00642_ch_T0001375:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255680	20255858	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=exon:HG00642_ch_T0001375:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20257692	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=intron:HG00642_ch_T0001375:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=exon:HG00642_ch_T0001375:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=intron:HG00642_ch_T0001375:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266699	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001375;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001375;transcript_name=HG00642_ch_T0001375;gene_name=BCORP1;ID=exon:HG00642_ch_T0001375:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266678	1000	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=HG00642_ch_T0001376;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=exon:HG00642_ch_T0001376:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=intron:HG00642_ch_T0001376:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=exon:HG00642_ch_T0001376:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=intron:HG00642_ch_T0001376:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=exon:HG00642_ch_T0001376:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=intron:HG00642_ch_T0001376:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=exon:HG00642_ch_T0001376:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=intron:HG00642_ch_T0001376:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001376;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001376;transcript_name=HG00642_ch_T0001376;gene_name=BCORP1;ID=exon:HG00642_ch_T0001376:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266680	1000	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=HG00642_ch_T0001377;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=intron:HG00642_ch_T0001377:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20256898	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=intron:HG00642_ch_T0001377:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=intron:HG00642_ch_T0001377:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=intron:HG00642_ch_T0001377:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=intron:HG00642_ch_T0001377:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266680	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001377;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001377;transcript_name=HG00642_ch_T0001377;gene_name=BCORP1;ID=exon:HG00642_ch_T0001377:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266704	1000	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=HG00642_ch_T0001378;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=exon:HG00642_ch_T0001378:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=intron:HG00642_ch_T0001378:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=exon:HG00642_ch_T0001378:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257692	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=intron:HG00642_ch_T0001378:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=exon:HG00642_ch_T0001378:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=intron:HG00642_ch_T0001378:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266704	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001378;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001378;transcript_name=HG00642_ch_T0001378;gene_name=BCORP1;ID=exon:HG00642_ch_T0001378:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266704	1000	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=HG00642_ch_T0001379;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=exon:HG00642_ch_T0001379:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=intron:HG00642_ch_T0001379:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255637	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=exon:HG00642_ch_T0001379:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255638	20257708	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=intron:HG00642_ch_T0001379:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=exon:HG00642_ch_T0001379:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=intron:HG00642_ch_T0001379:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266704	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001379;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001379;transcript_name=HG00642_ch_T0001379;gene_name=BCORP1;ID=exon:HG00642_ch_T0001379:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266676	1000	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=HG00642_ch_T0001380;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=exon:HG00642_ch_T0001380:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=intron:HG00642_ch_T0001380:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=exon:HG00642_ch_T0001380:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=intron:HG00642_ch_T0001380:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=exon:HG00642_ch_T0001380:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=intron:HG00642_ch_T0001380:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259093	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=exon:HG00642_ch_T0001380:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259094	20266650	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=intron:HG00642_ch_T0001380:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266676	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001380;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001380;transcript_name=HG00642_ch_T0001380;gene_name=BCORP1;ID=exon:HG00642_ch_T0001380:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266713	1000	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=HG00642_ch_T0001381;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=exon:HG00642_ch_T0001381:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=intron:HG00642_ch_T0001381:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=exon:HG00642_ch_T0001381:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=intron:HG00642_ch_T0001381:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=exon:HG00642_ch_T0001381:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=intron:HG00642_ch_T0001381:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=exon:HG00642_ch_T0001381:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=intron:HG00642_ch_T0001381:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001381;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001381;transcript_name=HG00642_ch_T0001381;gene_name=BCORP1;ID=exon:HG00642_ch_T0001381:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266706	1000	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=HG00642_ch_T0001382;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001382;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=exon:HG00642_ch_T0001382:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257692	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001382;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=intron:HG00642_ch_T0001382:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001382;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=exon:HG00642_ch_T0001382:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266645	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001382;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=intron:HG00642_ch_T0001382:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266706	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001382;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001382;transcript_name=HG00642_ch_T0001382;gene_name=BCORP1;ID=exon:HG00642_ch_T0001382:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266949	1000	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=HG00642_ch_T0001383;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=exon:HG00642_ch_T0001383:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257692	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=intron:HG00642_ch_T0001383:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=exon:HG00642_ch_T0001383:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=intron:HG00642_ch_T0001383:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=exon:HG00642_ch_T0001383:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20266650	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=intron:HG00642_ch_T0001383:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266949	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001383;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001383;transcript_name=HG00642_ch_T0001383;gene_name=BCORP1;ID=exon:HG00642_ch_T0001383:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266693	1000	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=HG00642_ch_T0001384;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=exon:HG00642_ch_T0001384:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=intron:HG00642_ch_T0001384:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=exon:HG00642_ch_T0001384:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257543	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=intron:HG00642_ch_T0001384:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257544	20257645	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=exon:HG00642_ch_T0001384:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257646	20266650	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=intron:HG00642_ch_T0001384:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266693	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001384;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001384;transcript_name=HG00642_ch_T0001384;gene_name=BCORP1;ID=exon:HG00642_ch_T0001384:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266897	1000	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=HG00642_ch_T0001385;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=intron:HG00642_ch_T0001385:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=intron:HG00642_ch_T0001385:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255858	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20256898	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=intron:HG00642_ch_T0001385:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=intron:HG00642_ch_T0001385:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=intron:HG00642_ch_T0001385:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266897	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001385;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001385;transcript_name=HG00642_ch_T0001385;gene_name=BCORP1;ID=exon:HG00642_ch_T0001385:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266713	1000	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=HG00642_ch_T0001386;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=exon:HG00642_ch_T0001386:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=intron:HG00642_ch_T0001386:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=exon:HG00642_ch_T0001386:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=intron:HG00642_ch_T0001386:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259093	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=exon:HG00642_ch_T0001386:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259094	20266650	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=intron:HG00642_ch_T0001386:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001386;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001386;transcript_name=HG00642_ch_T0001386;gene_name=BCORP1;ID=exon:HG00642_ch_T0001386:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266678	1000	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=HG00642_ch_T0001387;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=intron:HG00642_ch_T0001387:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=intron:HG00642_ch_T0001387:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=intron:HG00642_ch_T0001387:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20259008	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=intron:HG00642_ch_T0001387:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=intron:HG00642_ch_T0001387:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001387;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001387;transcript_name=HG00642_ch_T0001387;gene_name=BCORP1;ID=exon:HG00642_ch_T0001387:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266756	1000	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=HG00642_ch_T0001388;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=exon:HG00642_ch_T0001388:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=intron:HG00642_ch_T0001388:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=exon:HG00642_ch_T0001388:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=intron:HG00642_ch_T0001388:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=exon:HG00642_ch_T0001388:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266645	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=intron:HG00642_ch_T0001388:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266756	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001388;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001388;transcript_name=HG00642_ch_T0001388;gene_name=BCORP1;ID=exon:HG00642_ch_T0001388:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266678	1000	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=HG00642_ch_T0001389;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=exon:HG00642_ch_T0001389:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=intron:HG00642_ch_T0001389:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=exon:HG00642_ch_T0001389:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=intron:HG00642_ch_T0001389:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=exon:HG00642_ch_T0001389:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=intron:HG00642_ch_T0001389:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259093	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=exon:HG00642_ch_T0001389:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259094	20266650	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=intron:HG00642_ch_T0001389:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001389;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001389;transcript_name=HG00642_ch_T0001389;gene_name=BCORP1;ID=exon:HG00642_ch_T0001389:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266728	1000	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=HG00642_ch_T0001390;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001390;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=exon:HG00642_ch_T0001390:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001390;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=intron:HG00642_ch_T0001390:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001390;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=exon:HG00642_ch_T0001390:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266645	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001390;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=intron:HG00642_ch_T0001390:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266728	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001390;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001390;transcript_name=HG00642_ch_T0001390;gene_name=BCORP1;ID=exon:HG00642_ch_T0001390:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266939	1000	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=HG00642_ch_T0001391;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=exon:HG00642_ch_T0001391:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=intron:HG00642_ch_T0001391:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=exon:HG00642_ch_T0001391:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=intron:HG00642_ch_T0001391:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=exon:HG00642_ch_T0001391:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=intron:HG00642_ch_T0001391:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266939	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001391;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001391;transcript_name=HG00642_ch_T0001391;gene_name=BCORP1;ID=exon:HG00642_ch_T0001391:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266708	1000	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=HG00642_ch_T0001392;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=intron:HG00642_ch_T0001392:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=intron:HG00642_ch_T0001392:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255853	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255854	20256898	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=intron:HG00642_ch_T0001392:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=intron:HG00642_ch_T0001392:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=intron:HG00642_ch_T0001392:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266708	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001392;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001392;transcript_name=HG00642_ch_T0001392;gene_name=BCORP1;ID=exon:HG00642_ch_T0001392:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266704	1000	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=HG00642_ch_T0001393;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255778	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255779	20256898	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20266650	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=intron:HG00642_ch_T0001393:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266704	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001393;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001393;transcript_name=HG00642_ch_T0001393;gene_name=BCORP1;ID=exon:HG00642_ch_T0001393:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266684	1000	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=HG00642_ch_T0001394;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=exon:HG00642_ch_T0001394:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=intron:HG00642_ch_T0001394:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=exon:HG00642_ch_T0001394:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=intron:HG00642_ch_T0001394:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=exon:HG00642_ch_T0001394:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266645	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=intron:HG00642_ch_T0001394:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266684	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001394;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001394;transcript_name=HG00642_ch_T0001394;gene_name=BCORP1;ID=exon:HG00642_ch_T0001394:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266917	1000	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=HG00642_ch_T0001395;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=exon:HG00642_ch_T0001395:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257692	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=intron:HG00642_ch_T0001395:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=exon:HG00642_ch_T0001395:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=intron:HG00642_ch_T0001395:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=exon:HG00642_ch_T0001395:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=intron:HG00642_ch_T0001395:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266917	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001395;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001395;transcript_name=HG00642_ch_T0001395;gene_name=BCORP1;ID=exon:HG00642_ch_T0001395:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266913	1000	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=HG00642_ch_T0001396;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=exon:HG00642_ch_T0001396:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20257708	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=intron:HG00642_ch_T0001396:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=exon:HG00642_ch_T0001396:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=intron:HG00642_ch_T0001396:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=exon:HG00642_ch_T0001396:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20266650	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=intron:HG00642_ch_T0001396:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266913	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001396;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001396;transcript_name=HG00642_ch_T0001396;gene_name=BCORP1;ID=exon:HG00642_ch_T0001396:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266890	1000	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001397;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001397;gene_name=BCORP1;ID=HG00642_ch_T0001397;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001397;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001397;transcript_name=HG00642_ch_T0001397;gene_name=BCORP1;ID=exon:HG00642_ch_T0001397:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20266650	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001397;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001397;transcript_name=HG00642_ch_T0001397;gene_name=BCORP1;ID=intron:HG00642_ch_T0001397:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266890	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001397;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001397;transcript_name=HG00642_ch_T0001397;gene_name=BCORP1;ID=exon:HG00642_ch_T0001397:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266676	1000	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=HG00642_ch_T0001398;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=exon:HG00642_ch_T0001398:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=intron:HG00642_ch_T0001398:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=exon:HG00642_ch_T0001398:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=intron:HG00642_ch_T0001398:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=exon:HG00642_ch_T0001398:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266645	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=intron:HG00642_ch_T0001398:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266676	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001398;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001398;transcript_name=HG00642_ch_T0001398;gene_name=BCORP1;ID=exon:HG00642_ch_T0001398:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266676	1000	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=HG00642_ch_T0001399;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=exon:HG00642_ch_T0001399:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255679	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=intron:HG00642_ch_T0001399:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255680	20255778	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=exon:HG00642_ch_T0001399:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255779	20256898	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=intron:HG00642_ch_T0001399:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=exon:HG00642_ch_T0001399:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=intron:HG00642_ch_T0001399:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=exon:HG00642_ch_T0001399:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=intron:HG00642_ch_T0001399:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266676	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001399;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001399;transcript_name=HG00642_ch_T0001399;gene_name=BCORP1;ID=exon:HG00642_ch_T0001399:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266885	1000	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=HG00642_ch_T0001400;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=exon:HG00642_ch_T0001400:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=intron:HG00642_ch_T0001400:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=exon:HG00642_ch_T0001400:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=intron:HG00642_ch_T0001400:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=exon:HG00642_ch_T0001400:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=intron:HG00642_ch_T0001400:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=exon:HG00642_ch_T0001400:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=intron:HG00642_ch_T0001400:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266885	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001400;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001400;transcript_name=HG00642_ch_T0001400;gene_name=BCORP1;ID=exon:HG00642_ch_T0001400:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266676	1000	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=HG00642_ch_T0001401;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=exon:HG00642_ch_T0001401:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=intron:HG00642_ch_T0001401:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=exon:HG00642_ch_T0001401:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=intron:HG00642_ch_T0001401:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=exon:HG00642_ch_T0001401:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=intron:HG00642_ch_T0001401:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258338	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=exon:HG00642_ch_T0001401:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258339	20266650	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=intron:HG00642_ch_T0001401:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266676	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001401;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001401;transcript_name=HG00642_ch_T0001401;gene_name=BCORP1;ID=exon:HG00642_ch_T0001401:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266683	1000	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=HG00642_ch_T0001402;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=intron:HG00642_ch_T0001402:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=intron:HG00642_ch_T0001402:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=intron:HG00642_ch_T0001402:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258338	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258339	20259008	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=intron:HG00642_ch_T0001402:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=intron:HG00642_ch_T0001402:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266683	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001402;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001402;transcript_name=HG00642_ch_T0001402;gene_name=BCORP1;ID=exon:HG00642_ch_T0001402:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266911	1000	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=HG00642_ch_T0001403;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=exon:HG00642_ch_T0001403:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=intron:HG00642_ch_T0001403:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=exon:HG00642_ch_T0001403:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=intron:HG00642_ch_T0001403:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=exon:HG00642_ch_T0001403:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=intron:HG00642_ch_T0001403:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=exon:HG00642_ch_T0001403:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20266650	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=intron:HG00642_ch_T0001403:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266911	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001403;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001403;transcript_name=HG00642_ch_T0001403;gene_name=BCORP1;ID=exon:HG00642_ch_T0001403:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266678	1000	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=HG00642_ch_T0001404;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=exon:HG00642_ch_T0001404:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=intron:HG00642_ch_T0001404:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=exon:HG00642_ch_T0001404:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=intron:HG00642_ch_T0001404:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=exon:HG00642_ch_T0001404:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=intron:HG00642_ch_T0001404:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258357	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=exon:HG00642_ch_T0001404:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258358	20266650	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=intron:HG00642_ch_T0001404:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001404;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001404;transcript_name=HG00642_ch_T0001404;gene_name=BCORP1;ID=exon:HG00642_ch_T0001404:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266717	1000	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=HG00642_ch_T0001405;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20256481	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=exon:HG00642_ch_T0001405:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256482	20256898	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=intron:HG00642_ch_T0001405:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=exon:HG00642_ch_T0001405:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=intron:HG00642_ch_T0001405:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=exon:HG00642_ch_T0001405:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=intron:HG00642_ch_T0001405:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266717	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001405;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001405;transcript_name=HG00642_ch_T0001405;gene_name=BCORP1;ID=exon:HG00642_ch_T0001405:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266713	1000	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=HG00642_ch_T0001406;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=exon:HG00642_ch_T0001406:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=intron:HG00642_ch_T0001406:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=exon:HG00642_ch_T0001406:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=intron:HG00642_ch_T0001406:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=exon:HG00642_ch_T0001406:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=intron:HG00642_ch_T0001406:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=exon:HG00642_ch_T0001406:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20266650	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=intron:HG00642_ch_T0001406:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001406;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001406;transcript_name=HG00642_ch_T0001406;gene_name=BCORP1;ID=exon:HG00642_ch_T0001406:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266708	1000	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=HG00642_ch_T0001407;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=intron:HG00642_ch_T0001407:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=intron:HG00642_ch_T0001407:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255858	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20256898	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=intron:HG00642_ch_T0001407:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=intron:HG00642_ch_T0001407:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=intron:HG00642_ch_T0001407:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266708	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001407;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001407;transcript_name=HG00642_ch_T0001407;gene_name=BCORP1;ID=exon:HG00642_ch_T0001407:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266698	1000	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=HG00642_ch_T0001408;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=exon:HG00642_ch_T0001408:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=intron:HG00642_ch_T0001408:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255637	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=exon:HG00642_ch_T0001408:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255638	20257692	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=intron:HG00642_ch_T0001408:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=exon:HG00642_ch_T0001408:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=intron:HG00642_ch_T0001408:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266698	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001408;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001408;transcript_name=HG00642_ch_T0001408;gene_name=BCORP1;ID=exon:HG00642_ch_T0001408:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266713	1000	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=HG00642_ch_T0001409;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=exon:HG00642_ch_T0001409:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20256898	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=intron:HG00642_ch_T0001409:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=exon:HG00642_ch_T0001409:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=intron:HG00642_ch_T0001409:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=exon:HG00642_ch_T0001409:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266645	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=intron:HG00642_ch_T0001409:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266713	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001409;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001409;transcript_name=HG00642_ch_T0001409;gene_name=BCORP1;ID=exon:HG00642_ch_T0001409:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266678	1000	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=HG00642_ch_T0001410;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=intron:HG00642_ch_T0001410:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=intron:HG00642_ch_T0001410:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255778	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255779	20257708	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=intron:HG00642_ch_T0001410:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=intron:HG00642_ch_T0001410:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=intron:HG00642_ch_T0001410:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001410;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001410;transcript_name=HG00642_ch_T0001410;gene_name=BCORP1;ID=exon:HG00642_ch_T0001410:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266767	1000	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=HG00642_ch_T0001411;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255223	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=exon:HG00642_ch_T0001411:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=intron:HG00642_ch_T0001411:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=exon:HG00642_ch_T0001411:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=intron:HG00642_ch_T0001411:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=exon:HG00642_ch_T0001411:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=intron:HG00642_ch_T0001411:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266767	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001411;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001411;transcript_name=HG00642_ch_T0001411;gene_name=BCORP1;ID=exon:HG00642_ch_T0001411:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266713	1000	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=HG00642_ch_T0001412;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255858	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=exon:HG00642_ch_T0001412:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20256898	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=intron:HG00642_ch_T0001412:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=exon:HG00642_ch_T0001412:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=intron:HG00642_ch_T0001412:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=exon:HG00642_ch_T0001412:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=intron:HG00642_ch_T0001412:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001412;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001412;transcript_name=HG00642_ch_T0001412;gene_name=BCORP1;ID=exon:HG00642_ch_T0001412:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255059	20266708	1000	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=HG00642_ch_T0001413;Name=BCORP1
HG00642_chrY	CAT	exon	20255059	20255858	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=exon:HG00642_ch_T0001413:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20256898	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=intron:HG00642_ch_T0001413:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=exon:HG00642_ch_T0001413:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=intron:HG00642_ch_T0001413:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=exon:HG00642_ch_T0001413:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=intron:HG00642_ch_T0001413:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266708	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001413;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001413;transcript_name=HG00642_ch_T0001413;gene_name=BCORP1;ID=exon:HG00642_ch_T0001413:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255062	20266713	1000	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=HG00642_ch_T0001414;Name=BCORP1
HG00642_chrY	CAT	exon	20255062	20255223	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=exon:HG00642_ch_T0001414:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255679	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=intron:HG00642_ch_T0001414:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255680	20255778	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=exon:HG00642_ch_T0001414:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255779	20257692	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=intron:HG00642_ch_T0001414:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=exon:HG00642_ch_T0001414:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=intron:HG00642_ch_T0001414:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266713	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001414;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001414;transcript_name=HG00642_ch_T0001414;gene_name=BCORP1;ID=exon:HG00642_ch_T0001414:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255067	20266905	1000	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=HG00642_ch_T0001415;Name=BCORP1
HG00642_chrY	CAT	exon	20255067	20255223	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=intron:HG00642_ch_T0001415:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=intron:HG00642_ch_T0001415:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=intron:HG00642_ch_T0001415:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258338	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258339	20259008	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=intron:HG00642_ch_T0001415:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259093	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259094	20266650	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=intron:HG00642_ch_T0001415:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266905	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001415;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001415;transcript_name=HG00642_ch_T0001415;gene_name=BCORP1;ID=exon:HG00642_ch_T0001415:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255067	20266676	1000	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=HG00642_ch_T0001416;Name=BCORP1
HG00642_chrY	CAT	exon	20255067	20255223	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=exon:HG00642_ch_T0001416:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=intron:HG00642_ch_T0001416:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=exon:HG00642_ch_T0001416:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257692	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=intron:HG00642_ch_T0001416:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=exon:HG00642_ch_T0001416:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=intron:HG00642_ch_T0001416:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=exon:HG00642_ch_T0001416:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=intron:HG00642_ch_T0001416:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266676	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001416;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001416;transcript_name=HG00642_ch_T0001416;gene_name=BCORP1;ID=exon:HG00642_ch_T0001416:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255067	20266704	1000	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=HG00642_ch_T0001417;Name=BCORP1
HG00642_chrY	CAT	exon	20255067	20255223	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=exon:HG00642_ch_T0001417:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=intron:HG00642_ch_T0001417:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=exon:HG00642_ch_T0001417:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20256898	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=intron:HG00642_ch_T0001417:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=exon:HG00642_ch_T0001417:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=intron:HG00642_ch_T0001417:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=exon:HG00642_ch_T0001417:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20266650	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=intron:HG00642_ch_T0001417:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266704	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001417;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001417;transcript_name=HG00642_ch_T0001417;gene_name=BCORP1;ID=exon:HG00642_ch_T0001417:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255068	20266678	1000	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=HG00642_ch_T0001418;Name=BCORP1
HG00642_chrY	CAT	exon	20255068	20255223	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=intron:HG00642_ch_T0001418:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20257708	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=intron:HG00642_ch_T0001418:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=intron:HG00642_ch_T0001418:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258363	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20258364	20259008	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=intron:HG00642_ch_T0001418:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=intron:HG00642_ch_T0001418:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001418;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001418;transcript_name=HG00642_ch_T0001418;gene_name=BCORP1;ID=exon:HG00642_ch_T0001418:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20255070	20259088	1000	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=HG00642_ch_T0001419;Name=BCORP1
HG00642_chrY	CAT	exon	20255070	20255223	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255224	20255518	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=intron:HG00642_ch_T0001419:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255519	20255633	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255634	20255724	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=intron:HG00642_ch_T0001419:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20255725	20255858	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20255859	20256898	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=intron:HG00642_ch_T0001419:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=intron:HG00642_ch_T0001419:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=intron:HG00642_ch_T0001419:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001419;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001419;transcript_name=HG00642_ch_T0001419;gene_name=BCORP1;ID=exon:HG00642_ch_T0001419:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20256019	20266678	1000	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=HG00642_ch_T0001420;Name=BCORP1
HG00642_chrY	CAT	exon	20256019	20256481	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=exon:HG00642_ch_T0001420:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256482	20256898	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=intron:HG00642_ch_T0001420:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=exon:HG00642_ch_T0001420:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=intron:HG00642_ch_T0001420:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=exon:HG00642_ch_T0001420:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=intron:HG00642_ch_T0001420:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=exon:HG00642_ch_T0001420:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266650	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=intron:HG00642_ch_T0001420:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266651	20266678	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001420;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001420;transcript_name=HG00642_ch_T0001420;gene_name=BCORP1;ID=exon:HG00642_ch_T0001420:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20256187	20258338	1000	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=HG00642_ch_T0001421;Name=BCORP1
HG00642_chrY	CAT	exon	20256187	20256481	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=exon:HG00642_ch_T0001421:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256482	20256898	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=intron:HG00642_ch_T0001421:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=exon:HG00642_ch_T0001421:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257708	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=intron:HG00642_ch_T0001421:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257709	20257809	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=exon:HG00642_ch_T0001421:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20258282	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=intron:HG00642_ch_T0001421:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20258283	20258338	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001421;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001421;transcript_name=HG00642_ch_T0001421;gene_name=BCORP1;ID=exon:HG00642_ch_T0001421:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20256330	20266678	1000	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_G0000464;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=HG00642_ch_T0001422;Name=BCORP1
HG00642_chrY	CAT	exon	20256330	20256481	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=exon:HG00642_ch_T0001422:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256482	20256898	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=intron:HG00642_ch_T0001422:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20256899	20256958	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=exon:HG00642_ch_T0001422:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20256959	20257692	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=intron:HG00642_ch_T0001422:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20257693	20257809	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=exon:HG00642_ch_T0001422:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20257810	20259008	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=intron:HG00642_ch_T0001422:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20259009	20259088	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=exon:HG00642_ch_T0001422:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20259089	20266645	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=intron:HG00642_ch_T0001422:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20266646	20266678	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001422;gene_id=HG00642_ch_G0000464;Parent=HG00642_ch_T0001422;transcript_name=HG00642_ch_T0001422;gene_name=BCORP1;ID=exon:HG00642_ch_T0001422:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20156249	20184553	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000215580.13;gene_id=HG00642_ch_G0000465;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG00642_ch_G0000465;Name=BCORP1
HG00642_chrY	CAT	transcript	20156249	20184553	1000	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_G0000465;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=HG00642_ch_T0001360;Name=BCORP1
HG00642_chrY	CAT	exon	20156249	20156528	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20156529	20158592	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:0;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158593	20158748	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20158749	20158957	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:1;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20158958	20159035	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159036	20159627	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:2;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20159628	20159773	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20159774	20166124	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:3;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20166125	20166376	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20166377	20166732	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:4;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20166733	20167043	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20167044	20173573	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:5;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20173574	20173919	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20173920	20174308	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:6;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20174309	20174572	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20174573	20179833	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:7;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20179834	20179963	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20179964	20180359	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:8;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20180360	20180407	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:9;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20180408	20181335	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=intron:HG00642_ch_T0001360:9;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20181336	20184553	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00642_ch_T0001360;gene_id=HG00642_ch_G0000465;Parent=HG00642_ch_T0001360;transcript_name=HG00642_ch_T0001360;gene_name=BCORP1;ID=exon:HG00642_ch_T0001360:10;Name=BCORP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20266982	20305943	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000291033.2;gene_id=HG00642_ch_G0000466;gene_biotype=lncRNA;gene_name=TXLNGY;gene_sources=liftoff;ID=HG00642_ch_G0000466;Name=TXLNGY
HG00642_chrY	CAT	transcript	20266982	20293834	1000	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=HG00642_ch_T0001423;Name=TXLNGY
HG00642_chrY	CAT	exon	20266982	20267239	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001423:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293834	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001423;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001423;transcript_name=HG00642_ch_T0001423;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001423:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266982	20289916	1000	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=HG00642_ch_T0001424;Name=TXLNGY
HG00642_chrY	CAT	exon	20266982	20267151	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001424:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001424:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001424:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001424:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288319	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001424:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289195	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001424:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289196	20289281	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001424:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001424:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20289916	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001424;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001424;transcript_name=HG00642_ch_T0001424;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001424:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266995	20287828	1000	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001425;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001425;gene_name=TXLNGY;ID=HG00642_ch_T0001425;Name=TXLNGY
HG00642_chrY	CAT	exon	20266995	20267239	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001425;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001425;transcript_name=HG00642_ch_T0001425;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001425:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001425;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001425;transcript_name=HG00642_ch_T0001425;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001425:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287828	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001425;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001425;transcript_name=HG00642_ch_T0001425;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001425:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266997	20289516	1000	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001426;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001426;gene_name=TXLNGY;ID=HG00642_ch_T0001426;Name=TXLNGY
HG00642_chrY	CAT	exon	20266997	20267620	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001426;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001426;transcript_name=HG00642_ch_T0001426;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001426:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20286878	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001426;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001426;transcript_name=HG00642_ch_T0001426;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001426:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20289516	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001426;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001426;transcript_name=HG00642_ch_T0001426;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001426:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266997	20268240	1000	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001427;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001427;gene_name=TXLNGY;ID=HG00642_ch_T0001427;Name=TXLNGY
HG00642_chrY	CAT	exon	20266997	20268240	.	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001427;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001427;transcript_name=HG00642_ch_T0001427;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001427:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266998	20290092	1000	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=HG00642_ch_T0001428;Name=TXLNGY
HG00642_chrY	CAT	exon	20266998	20267239	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001428:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001428:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001428:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001428:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289281	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001428:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001428:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001428;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001428;transcript_name=HG00642_ch_T0001428;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001428:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266998	20287827	1000	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001429;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001429;gene_name=TXLNGY;ID=HG00642_ch_T0001429;Name=TXLNGY
HG00642_chrY	CAT	exon	20266998	20267151	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001429;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001429;transcript_name=HG00642_ch_T0001429;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001429:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001429;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001429;transcript_name=HG00642_ch_T0001429;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001429:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287827	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001429;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001429;transcript_name=HG00642_ch_T0001429;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001429:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20266998	20290092	1000	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=HG00642_ch_T0001430;Name=TXLNGY
HG00642_chrY	CAT	exon	20266998	20267151	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001430;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001430:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001430;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001430:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001430;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001430:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001430;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001430:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20290092	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001430;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001430;transcript_name=HG00642_ch_T0001430;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001430:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267000	20290088	1000	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=HG00642_ch_T0001431;Name=TXLNGY
HG00642_chrY	CAT	exon	20267000	20267239	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001431;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001431:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001431;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001431:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001431;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001431:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001431;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001431:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20290088	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001431;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001431;transcript_name=HG00642_ch_T0001431;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001431:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267000	20293834	1000	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=HG00642_ch_T0001432;Name=TXLNGY
HG00642_chrY	CAT	exon	20267000	20267239	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001432:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001432:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20289189	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001432:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001432:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001432:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293834	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001432;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001432;transcript_name=HG00642_ch_T0001432;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001432:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267003	20289518	1000	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=HG00642_ch_T0001433;Name=TXLNGY
HG00642_chrY	CAT	exon	20267003	20267239	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001433:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20269053	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001433:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20269054	20269128	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001433:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20269129	20286878	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001433:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001433:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001433:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289518	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001433;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001433;transcript_name=HG00642_ch_T0001433;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001433:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267011	20293830	1000	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=HG00642_ch_T0001434;Name=TXLNGY
HG00642_chrY	CAT	exon	20267011	20267239	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001434:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001434:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001434:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001434:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001434:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20293067	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001434:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001434;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001434;transcript_name=HG00642_ch_T0001434;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001434:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267016	20290092	1000	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=HG00642_ch_T0001435;Name=TXLNGY
HG00642_chrY	CAT	exon	20267016	20267239	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001435:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001435:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001435:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001435:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001435:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001435;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001435;transcript_name=HG00642_ch_T0001435;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001435:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20289945	1000	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=HG00642_ch_T0001436;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267239	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001436:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20268542	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001436:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20268543	20268588	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001436:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20268589	20286878	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001436:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001436:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001436:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001436:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001436:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20289945	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001436;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001436;transcript_name=HG00642_ch_T0001436;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001436:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20290092	1000	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=HG00642_ch_T0001437;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267239	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001437:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001437:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001437:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001437:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001437:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001437:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001437;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001437;transcript_name=HG00642_ch_T0001437;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001437:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20290092	1000	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=HG00642_ch_T0001438;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267239	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001438:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001438:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001438:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288211	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001438:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001438:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001438:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001438:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001438:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001438;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001438;transcript_name=HG00642_ch_T0001438;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001438:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20290092	1000	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=HG00642_ch_T0001439;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267151	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001439:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001439:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001439:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001439:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001439:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001439:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001439;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001439;transcript_name=HG00642_ch_T0001439;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001439:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20293830	1000	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=HG00642_ch_T0001440;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267151	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001440:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288211	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001440:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001440:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001440:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001440:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001440;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001440;transcript_name=HG00642_ch_T0001440;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001440:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20293827	1000	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=HG00642_ch_T0001441;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267151	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001441:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293827	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001441;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001441;transcript_name=HG00642_ch_T0001441;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001441:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267019	20293830	1000	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=HG00642_ch_T0001442;Name=TXLNGY
HG00642_chrY	CAT	exon	20267019	20267151	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20290278	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20290279	20290441	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20290442	20291448	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001442:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001442;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001442;transcript_name=HG00642_ch_T0001442;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001442:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267021	20290092	1000	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=HG00642_ch_T0001443;Name=TXLNGY
HG00642_chrY	CAT	exon	20267021	20267239	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001443;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001443:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001443;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001443:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001443;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001443:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289751	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001443;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001443:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001443;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001443;transcript_name=HG00642_ch_T0001443;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001443:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267021	20290088	1000	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=HG00642_ch_T0001444;Name=TXLNGY
HG00642_chrY	CAT	exon	20267021	20267239	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001444:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286889	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001444:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286890	20287176	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001444:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288211	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001444:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001444:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001444:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001444:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001444:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290088	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001444;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001444;transcript_name=HG00642_ch_T0001444;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001444:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267024	20293830	1000	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=HG00642_ch_T0001445;Name=TXLNGY
HG00642_chrY	CAT	exon	20267024	20267151	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001445:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001445:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287061	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001445:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287062	20289189	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001445:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001445:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001445:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001445:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001445:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001445;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001445;transcript_name=HG00642_ch_T0001445;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001445:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267025	20290092	1000	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=HG00642_ch_T0001446;Name=TXLNGY
HG00642_chrY	CAT	exon	20267025	20267151	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001446:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001446:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001446:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001446:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001446:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001446;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001446;transcript_name=HG00642_ch_T0001446;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001446:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267027	20287827	1000	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001447;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001447;gene_name=TXLNGY;ID=HG00642_ch_T0001447;Name=TXLNGY
HG00642_chrY	CAT	exon	20267027	20267239	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001447;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001447;transcript_name=HG00642_ch_T0001447;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001447:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286889	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001447;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001447;transcript_name=HG00642_ch_T0001447;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001447:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286890	20287827	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001447;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001447;transcript_name=HG00642_ch_T0001447;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001447:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267032	20293824	1000	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=HG00642_ch_T0001448;Name=TXLNGY
HG00642_chrY	CAT	exon	20267032	20267151	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001448:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001448:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001448:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001448:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20293067	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001448:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293824	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001448;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001448;transcript_name=HG00642_ch_T0001448;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001448:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267035	20287827	1000	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=HG00642_ch_T0001449;Name=TXLNGY
HG00642_chrY	CAT	exon	20267035	20267239	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001449;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001449:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20276373	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001449;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001449:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20276374	20276491	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001449;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001449:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20276492	20286878	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001449;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001449:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287827	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001449;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001449;transcript_name=HG00642_ch_T0001449;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001449:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267035	20293827	1000	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=HG00642_ch_T0001450;Name=TXLNGY
HG00642_chrY	CAT	exon	20267035	20267151	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001450:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001450:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001450:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001450:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001450:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001450:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001450:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001450:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293827	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001450;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001450;transcript_name=HG00642_ch_T0001450;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001450:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267037	20290092	1000	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=HG00642_ch_T0001451;Name=TXLNGY
HG00642_chrY	CAT	exon	20267037	20267151	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001451:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001451:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001451:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001451:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289281	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001451:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001451:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001451;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001451;transcript_name=HG00642_ch_T0001451;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001451:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267041	20269110	1000	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=HG00642_ch_T0001452;Name=TXLNGY
HG00642_chrY	CAT	exon	20267041	20267239	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001452;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001452:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20267509	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001452;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001452:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20267510	20267620	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001452;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001452:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20269053	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001452;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001452:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20269054	20269110	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001452;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001452;transcript_name=HG00642_ch_T0001452;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001452:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267041	20290092	1000	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=HG00642_ch_T0001453;Name=TXLNGY
HG00642_chrY	CAT	exon	20267041	20267151	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001453:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001453:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001453:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001453:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289058	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001453:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289059	20289189	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001453:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001453:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001453:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001453;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001453;transcript_name=HG00642_ch_T0001453;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001453:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267045	20293835	1000	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=HG00642_ch_T0001454;Name=TXLNGY
HG00642_chrY	CAT	exon	20267045	20267239	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001454:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001454:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001454:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001454:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001454:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001454:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001454:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001454:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293835	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001454;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001454;transcript_name=HG00642_ch_T0001454;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001454:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267046	20289518	1000	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=HG00642_ch_T0001455;Name=TXLNGY
HG00642_chrY	CAT	exon	20267046	20267239	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001455:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20276373	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001455:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20276374	20276491	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001455:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20276492	20286878	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001455:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001455:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001455:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289518	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001455;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001455;transcript_name=HG00642_ch_T0001455;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001455:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267047	20290393	1000	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=HG00642_ch_T0001456;Name=TXLNGY
HG00642_chrY	CAT	exon	20267047	20267239	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001456:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001456:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001456:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001456:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001456:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20290278	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001456:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20290279	20290393	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001456;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001456;transcript_name=HG00642_ch_T0001456;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001456:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267049	20293830	1000	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=HG00642_ch_T0001457;Name=TXLNGY
HG00642_chrY	CAT	exon	20267049	20267239	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001457;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001457:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001457;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001457:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001457;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001457:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20293067	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001457;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001457:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001457;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001457;transcript_name=HG00642_ch_T0001457;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001457:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267063	20289959	1000	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=HG00642_ch_T0001459;Name=TXLNGY
HG00642_chrY	CAT	exon	20267063	20267239	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001459:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267240	20286878	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001459:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001459:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001459:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001459:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20289189	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001459:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001459:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001459:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20289959	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001459;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001459;transcript_name=HG00642_ch_T0001459;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001459:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267255	20289959	1000	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=HG00642_ch_T0001460;Name=TXLNGY
HG00642_chrY	CAT	exon	20267255	20267620	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001460;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001460:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20286878	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001460;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001460:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001460;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001460:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289751	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001460;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001460:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20289959	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001460;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001460;transcript_name=HG00642_ch_T0001460;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001460:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267456	20289518	1000	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=HG00642_ch_T0001461;Name=TXLNGY
HG00642_chrY	CAT	exon	20267456	20267620	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001461:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20269053	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001461:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20269054	20269128	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001461:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20269129	20286878	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001461:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001461:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001461:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289518	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001461;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001461;transcript_name=HG00642_ch_T0001461;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001461:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267508	20293091	1000	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=HG00642_ch_T0001462;Name=TXLNGY
HG00642_chrY	CAT	exon	20267508	20267620	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001462:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20286878	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001462:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001462:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001462:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001462:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001462:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001462:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001462:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293091	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001462;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001462;transcript_name=HG00642_ch_T0001462;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001462:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267508	20290092	1000	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=HG00642_ch_T0001463;Name=TXLNGY
HG00642_chrY	CAT	exon	20267508	20267620	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20276373	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001463:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20276374	20276491	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20276492	20286878	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001463:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001463:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20289058	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289059	20289189	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001463:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001463:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290092	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001463;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001463;transcript_name=HG00642_ch_T0001463;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001463:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267512	20290088	1000	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=HG00642_ch_T0001464;Name=TXLNGY
HG00642_chrY	CAT	exon	20267512	20267620	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20286878	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001464:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001464:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001464:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001464:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001464:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20290088	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001464;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001464;transcript_name=HG00642_ch_T0001464;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001464:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267514	20287170	1000	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=HG00642_ch_T0001465;Name=TXLNGY
HG00642_chrY	CAT	exon	20267514	20267620	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001465;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001465:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20268431	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001465;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001465:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20268432	20268588	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001465;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001465:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20268589	20286878	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001465;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001465:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287170	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001465;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001465;transcript_name=HG00642_ch_T0001465;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001465:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20267527	20289873	1000	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=HG00642_ch_T0001466;Name=TXLNGY
HG00642_chrY	CAT	exon	20267527	20267620	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267621	20268542	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20268543	20268588	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20268589	20286878	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20288038	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288039	20288080	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288081	20288211	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20288212	20288319	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20289751	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001466:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289752	20289873	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001466;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001466;transcript_name=HG00642_ch_T0001466;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001466:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20288278	20293271	1000	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=HG00642_ch_T0001467;Name=TXLNGY
HG00642_chrY	CAT	exon	20288278	20288319	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001467:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20288320	20289189	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001467:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001467:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291588	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001467:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291589	20291628	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001467:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001467:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293271	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001467;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001467;transcript_name=HG00642_ch_T0001467;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001467:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20290444	20293830	1000	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001468;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001468;gene_name=TXLNGY;ID=HG00642_ch_T0001468;Name=TXLNGY
HG00642_chrY	CAT	exon	20290444	20291628	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001468;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001468;transcript_name=HG00642_ch_T0001468;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001468:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001468;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001468;transcript_name=HG00642_ch_T0001468;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001468:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293830	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001468;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001468;transcript_name=HG00642_ch_T0001468;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001468:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20292119	20305943	1000	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=HG00642_ch_T0001469;Name=TXLNGY
HG00642_chrY	CAT	exon	20292119	20292483	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001469:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20292484	20293067	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001469:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20297334	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001469:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20297335	20299407	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001469:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20299408	20299500	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001469:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20299501	20301884	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001469:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20301885	20301980	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001469:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20301981	20303465	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001469:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20303466	20305943	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001469;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001469;transcript_name=HG00642_ch_T0001469;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001469:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20292757	20293830	1000	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001470;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001470;gene_name=TXLNGY;ID=HG00642_ch_T0001470;Name=TXLNGY
HG00642_chrY	CAT	exon	20292757	20293830	.	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001470;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001470;transcript_name=HG00642_ch_T0001470;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001470:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20297026	20303720	1000	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_G0000466;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=HG00642_ch_T0001471;Name=TXLNGY
HG00642_chrY	CAT	exon	20297026	20297334	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001471:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20297335	20298220	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001471:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20298221	20298308	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001471:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20298309	20299407	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001471:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20299408	20299500	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001471:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20299501	20301884	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001471:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20301885	20301980	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001471:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20301981	20303465	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001471:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20303466	20303720	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001471;gene_id=HG00642_ch_G0000466;Parent=HG00642_ch_T0001471;transcript_name=HG00642_ch_T0001471;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001471:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20267051	20303789	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000131002.15;gene_id=HG00642_ch_G0000467;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG00642_ch_G0000467;Name=TXLNGY
HG00642_chrY	CAT	transcript	20267051	20303789	1000	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_G0000467;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=HG00642_ch_T0001458;Name=TXLNGY
HG00642_chrY	CAT	exon	20267051	20267151	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20267152	20286878	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20286879	20287176	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20287177	20289189	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20289190	20289281	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20289282	20291448	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20291449	20291628	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20291629	20293067	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20293068	20293262	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20293263	20295683	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20295684	20295803	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20295804	20297259	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20297260	20297334	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20297335	20299407	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20299408	20299500	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20299501	20301884	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20301885	20301980	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:8;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20301981	20303465	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=intron:HG00642_ch_T0001458:8;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20303466	20303789	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00642_ch_T0001458;gene_id=HG00642_ch_G0000467;Parent=HG00642_ch_T0001458;transcript_name=HG00642_ch_T0001458;gene_name=TXLNGY;ID=exon:HG00642_ch_T0001458:9;Name=TXLNGY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20297857	20298426	.	+	.	source_gene_common_name=ENSG00000267793;source_gene=ENSG00000267793.1;gene_id=HG00642_ch_G0000468;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000267793;gene_sources=liftoff;ID=HG00642_ch_G0000468;Name=ENSG00000267793
HG00642_chrY	CAT	transcript	20297857	20298426	1000	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG00642_ch_T0001472;gene_id=HG00642_ch_G0000468;Parent=HG00642_ch_G0000468;transcript_name=HG00642_ch_T0001472;gene_name=ENSG00000267793;ID=HG00642_ch_T0001472;Name=ENSG00000267793
HG00642_chrY	CAT	exon	20297857	20298426	.	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG00642_ch_T0001472;gene_id=HG00642_ch_G0000468;Parent=HG00642_ch_T0001472;transcript_name=HG00642_ch_T0001472;gene_name=ENSG00000267793;ID=exon:HG00642_ch_T0001472:0;Name=ENSG00000267793;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20391608	20394273	.	-	.	source_gene_common_name=ENSG00000260197;source_gene=ENSG00000260197.1;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;gene_id=HG00642_ch_G0000469;gene_biotype=lncRNA;gene_name=ENSG00000260197;gene_sources=liftoff;ID=HG00642_ch_G0000469;Name=ENSG00000260197
HG00642_chrY	CAT	transcript	20391608	20394273	1000	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG00642_ch_T0001473;gene_id=HG00642_ch_G0000469;Parent=HG00642_ch_G0000469;transcript_name=HG00642_ch_T0001473;gene_name=ENSG00000260197;ID=HG00642_ch_T0001473;Name=ENSG00000260197
HG00642_chrY	CAT	exon	20391608	20394273	.	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG00642_ch_T0001473;gene_id=HG00642_ch_G0000469;Parent=HG00642_ch_T0001473;transcript_name=HG00642_ch_T0001473;gene_name=ENSG00000260197;ID=exon:HG00642_ch_T0001473:0;Name=ENSG00000260197;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20403532	20444606	.	-	.	source_gene_common_name=KDM5D;source_gene=ENSG00000012817.16;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;gene_id=HG00642_ch_G0000470;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff;ID=HG00642_ch_G0000470;Name=KDM5D
HG00642_chrY	CAT	transcript	20403532	20444393	100	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=HG00642_ch_T0001474;Name=KDM5D
HG00642_chrY	CAT	exon	20403532	20406012	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20405662	20406012	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	20405662	20405664	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=stop_codon:HG00642_ch_T0001474;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406307	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406108	20406307	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406308	20406460	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406461	20406530	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406461	20406530	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406814	20407413	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407601	20407738	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407911	20408090	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20408542	20408680	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409476	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20409118	20409476	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409477	20410042	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20410043	20410139	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415018	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415019	20415166	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415019	20415166	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415167	20415281	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415282	20415406	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415282	20415406	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415490	20415671	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415946	20416140	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416382	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20416263	20416382	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416383	20420538	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420539	20420701	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420539	20420701	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420702	20420796	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420797	20420978	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420797	20420978	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420979	20431438	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431439	20431597	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431439	20431597	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431598	20431712	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431713	20431832	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431713	20431832	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431833	20432250	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20432251	20432409	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20432251	20432409	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20432410	20435018	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435019	20435164	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435019	20435164	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435165	20435287	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435288	20435417	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435288	20435417	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435418	20439194	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20439195	20439329	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20439195	20439329	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20439330	20440984	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20440985	20441155	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20440985	20441155	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441156	20441401	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20441402	20441524	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20441402	20441524	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441525	20442828	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20442829	20442906	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20442829	20442906	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20442907	20444051	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444052	20444220	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20444052	20444201	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001474:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	20444199	20444201	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=start_codon:HG00642_ch_T0001474;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444221	20444337	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=intron:HG00642_ch_T0001474:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444338	20444393	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00642_ch_T0001474;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001474;transcript_name=HG00642_ch_T0001474;gene_name=KDM5D;ID=exon:HG00642_ch_T0001474:26;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20403532	20416362	1000	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=HG00642_ch_T0001475;Name=KDM5D
HG00642_chrY	CAT	exon	20403532	20406012	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406530	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409927	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409928	20410042	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415250	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415251	20415406	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=intron:HG00642_ch_T0001475:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416362	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00642_ch_T0001475;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001475;transcript_name=HG00642_ch_T0001475;gene_name=KDM5D;ID=exon:HG00642_ch_T0001475:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20405084	20444606	100	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=HG00642_ch_T0001476;Name=KDM5D
HG00642_chrY	CAT	exon	20405084	20406012	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20405662	20406012	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	20405662	20405664	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=stop_codon:HG00642_ch_T0001476;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406307	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406108	20406307	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406308	20406460	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406461	20406530	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406461	20406530	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406814	20407413	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407601	20407738	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407911	20408090	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20408542	20408680	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409476	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20409118	20409476	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409477	20410042	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20410043	20410139	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415018	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415019	20415166	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415019	20415166	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415167	20415281	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415282	20415406	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415282	20415406	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415490	20415671	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415946	20416140	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416382	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20416263	20416382	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416383	20420538	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420539	20420701	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420539	20420701	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420702	20420796	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420797	20420978	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420797	20420978	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420979	20423007	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20423008	20423100	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20423008	20423100	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20423101	20431438	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431439	20431597	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431439	20431597	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431598	20431712	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431713	20431832	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431713	20431832	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431833	20432250	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20432251	20432409	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20432251	20432409	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20432410	20435018	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435019	20435164	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435019	20435164	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435165	20435287	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435288	20435417	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435288	20435417	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435418	20439194	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20439195	20439329	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20439195	20439329	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20439330	20440984	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20440985	20441155	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20440985	20441155	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441156	20441401	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20441402	20441524	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20441402	20441524	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441525	20442828	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20442829	20442906	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20442829	20442906	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20442907	20444051	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444052	20444220	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:26;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20444052	20444201	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001476:26;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	20444199	20444201	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=start_codon:HG00642_ch_T0001476;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444221	20444337	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=intron:HG00642_ch_T0001476:26;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444338	20444606	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00642_ch_T0001476;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001476;transcript_name=HG00642_ch_T0001476;gene_name=KDM5D;ID=exon:HG00642_ch_T0001476:27;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20405087	20444428	100	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=HG00642_ch_T0001477;Name=KDM5D
HG00642_chrY	CAT	exon	20405087	20406012	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20405662	20406012	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	20405662	20405664	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=stop_codon:HG00642_ch_T0001477;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406307	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406108	20406307	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406308	20406460	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406461	20406530	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406461	20406530	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406814	20407413	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407601	20407738	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407911	20408090	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20408542	20408680	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409476	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20409118	20409476	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409477	20410042	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20410043	20410139	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415018	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415019	20415166	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415019	20415166	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415167	20415281	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415282	20415406	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415282	20415406	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415490	20415671	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415946	20416140	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416382	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20416263	20416382	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416383	20420538	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420539	20420701	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420539	20420701	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420702	20420796	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420797	20420978	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420797	20420978	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420979	20431438	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431439	20431597	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431439	20431597	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431598	20431712	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431713	20431832	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431713	20431832	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431833	20432250	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20432251	20432409	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20432251	20432409	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20432410	20435018	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435019	20435164	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435019	20435164	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435165	20435287	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435288	20435417	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435288	20435417	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435418	20439194	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20439195	20439329	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20439195	20439329	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20439330	20441401	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20441402	20441524	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20441402	20441524	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441525	20442828	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20442829	20442906	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20442829	20442906	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20442907	20444051	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444052	20444220	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20444052	20444201	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001477:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	20444199	20444201	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=start_codon:HG00642_ch_T0001477;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444221	20444337	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=intron:HG00642_ch_T0001477:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444338	20444428	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00642_ch_T0001477;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001477;transcript_name=HG00642_ch_T0001477;gene_name=KDM5D;ID=exon:HG00642_ch_T0001477:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20405092	20422134	1000	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=HG00642_ch_T0001478;Name=KDM5D
HG00642_chrY	CAT	exon	20405092	20406012	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406530	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409476	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409477	20410042	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415018	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415019	20415166	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415167	20415281	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415282	20415406	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415778	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415779	20415945	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416382	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416383	20420538	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420539	20420701	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420702	20420796	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=intron:HG00642_ch_T0001478:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420797	20422134	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00642_ch_T0001478;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001478;transcript_name=HG00642_ch_T0001478;gene_name=KDM5D;ID=exon:HG00642_ch_T0001478:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20405730	20444590	100	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=HG00642_ch_T0001479;Name=KDM5D
HG00642_chrY	CAT	exon	20405730	20406012	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20405730	20406012	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406013	20406107	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406108	20406307	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406108	20406307	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406308	20406460	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406461	20406530	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406461	20406530	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20406531	20406813	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20406814	20407413	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406814	20407413	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407601	20407738	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407910	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407911	20408090	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407911	20408090	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408680	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20408542	20408680	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408681	20409117	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20409118	20409476	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20409118	20409476	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409477	20410042	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410139	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20410043	20410139	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20410140	20415018	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415019	20415166	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415019	20415166	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415167	20415281	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415282	20415406	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415282	20415406	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415490	20415671	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:11;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416140	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20415946	20416140	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416141	20416262	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:12;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20416263	20416382	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20416263	20416382	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20416383	20420538	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:13;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420539	20420701	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420539	20420701	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420702	20420796	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:14;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20420797	20420978	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420797	20420978	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420979	20431438	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:15;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431439	20431597	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431439	20431597	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431598	20431712	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:16;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431713	20431832	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431713	20431832	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431833	20432250	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:17;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20432251	20432409	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20432251	20432409	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20432410	20435018	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:18;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435019	20435164	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435019	20435164	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435165	20435287	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:19;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435288	20435417	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435288	20435417	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435418	20439194	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:20;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20439195	20439329	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20439195	20439329	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20439330	20440984	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:21;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20440985	20441155	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20440985	20441155	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441156	20442828	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:22;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20442829	20442906	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20442829	20442906	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20442907	20444051	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:23;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444052	20444220	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20444052	20444201	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001479:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	20444199	20444201	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=start_codon:HG00642_ch_T0001479;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444221	20444337	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=intron:HG00642_ch_T0001479:24;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444338	20444590	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00642_ch_T0001479;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001479;transcript_name=HG00642_ch_T0001479;gene_name=KDM5D;ID=exon:HG00642_ch_T0001479:25;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20406849	20408616	100	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=HG00642_ch_T0001480;Name=KDM5D
HG00642_chrY	CAT	exon	20406849	20407413	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=exon:HG00642_ch_T0001480:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20406849	20407413	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001480:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407414	20407600	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=intron:HG00642_ch_T0001480:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407601	20407738	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=exon:HG00642_ch_T0001480:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407601	20407738	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001480:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20407739	20407988	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=intron:HG00642_ch_T0001480:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20407989	20408090	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=exon:HG00642_ch_T0001480:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20407989	20408090	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001480:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20408091	20408541	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=intron:HG00642_ch_T0001480:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20408542	20408616	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=exon:HG00642_ch_T0001480:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20408542	20408616	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00642_ch_T0001480;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001480;transcript_name=HG00642_ch_T0001480;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001480:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20409367	20410273	1000	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00642_ch_T0001481;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001481;gene_name=KDM5D;ID=HG00642_ch_T0001481;Name=KDM5D
HG00642_chrY	CAT	exon	20409367	20409927	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00642_ch_T0001481;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001481;transcript_name=HG00642_ch_T0001481;gene_name=KDM5D;ID=exon:HG00642_ch_T0001481:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20409928	20410042	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00642_ch_T0001481;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001481;transcript_name=HG00642_ch_T0001481;gene_name=KDM5D;ID=intron:HG00642_ch_T0001481:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20410043	20410273	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00642_ch_T0001481;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001481;transcript_name=HG00642_ch_T0001481;gene_name=KDM5D;ID=exon:HG00642_ch_T0001481:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20414803	20416015	1000	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=HG00642_ch_T0001482;Name=KDM5D
HG00642_chrY	CAT	exon	20414803	20415406	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001482;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=exon:HG00642_ch_T0001482:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415407	20415489	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001482;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=intron:HG00642_ch_T0001482:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415490	20415671	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001482;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=exon:HG00642_ch_T0001482:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20415672	20415945	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001482;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=intron:HG00642_ch_T0001482:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20415946	20416015	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00642_ch_T0001482;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001482;transcript_name=HG00642_ch_T0001482;gene_name=KDM5D;ID=exon:HG00642_ch_T0001482:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20420939	20444378	100	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_G0000470;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=HG00642_ch_T0001483;Name=KDM5D
HG00642_chrY	CAT	exon	20420939	20420978	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20420939	20420978	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20420979	20431438	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:0;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431439	20431597	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431439	20431597	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431598	20431712	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:1;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20431713	20431832	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20431713	20431832	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20431833	20432250	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:2;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20432251	20432409	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20432251	20432409	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20432410	20435018	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:3;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435019	20435164	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435019	20435164	.	-	2	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435165	20435287	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:4;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20435288	20435417	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20435288	20435417	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20435418	20440984	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:5;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20440985	20441155	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20440985	20441155	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441156	20441401	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:6;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20441402	20441524	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20441402	20441524	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20441525	20442828	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:7;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20442829	20442906	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20442829	20442906	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20442907	20444051	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:8;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444052	20444220	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	20444052	20444201	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=CDS:HG00642_ch_T0001483:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	20444199	20444201	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=start_codon:HG00642_ch_T0001483;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444221	20444337	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=intron:HG00642_ch_T0001483:9;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20444338	20444378	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00642_ch_T0001483;gene_id=HG00642_ch_G0000470;Parent=HG00642_ch_T0001483;transcript_name=HG00642_ch_T0001483;gene_name=KDM5D;ID=exon:HG00642_ch_T0001483:10;Name=KDM5D;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20444423	20459645	.	+	.	source_gene_common_name=ENSG00000288049;source_gene=ENSG00000288049.2;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;gene_id=HG00642_ch_G0000471;gene_biotype=lncRNA;gene_name=ENSG00000288049;gene_sources=liftoff;ID=HG00642_ch_G0000471;Name=ENSG00000288049
HG00642_chrY	CAT	transcript	20444423	20457009	1000	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_G0000471;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=HG00642_ch_T0001484;Name=ENSG00000288049
HG00642_chrY	CAT	exon	20444423	20445380	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001484;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001484:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20445381	20454292	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001484;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001484:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454293	20454482	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001484;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001484:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20454483	20454871	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001484;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001484:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454872	20457009	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00642_ch_T0001484;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001484;transcript_name=HG00642_ch_T0001484;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001484:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20444619	20459645	1000	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_G0000471;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=HG00642_ch_T0001485;Name=ENSG00000288049
HG00642_chrY	CAT	exon	20444619	20445380	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001485;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001485:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20445381	20454393	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001485;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001485:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454394	20454482	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001485;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001485:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20454483	20454871	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001485;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001485:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454872	20459645	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00642_ch_T0001485;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001485;transcript_name=HG00642_ch_T0001485;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001485:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20444655	20454364	1000	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00642_ch_T0001486;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_G0000471;transcript_name=HG00642_ch_T0001486;gene_name=ENSG00000288049;ID=HG00642_ch_T0001486;Name=ENSG00000288049
HG00642_chrY	CAT	exon	20444655	20444865	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00642_ch_T0001486;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001486;transcript_name=HG00642_ch_T0001486;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001486:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444866	20454292	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00642_ch_T0001486;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001486;transcript_name=HG00642_ch_T0001486;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001486:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454293	20454364	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00642_ch_T0001486;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001486;transcript_name=HG00642_ch_T0001486;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001486:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	20444668	20454962	1000	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_G0000471;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=HG00642_ch_T0001487;Name=ENSG00000288049
HG00642_chrY	CAT	exon	20444668	20444865	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001487;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001487:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20444866	20454393	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001487;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001487:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454394	20454482	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001487;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001487:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20454483	20454871	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001487;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=intron:HG00642_ch_T0001487:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20454872	20454962	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00642_ch_T0001487;gene_id=HG00642_ch_G0000471;Parent=HG00642_ch_T0001487;transcript_name=HG00642_ch_T0001487;gene_name=ENSG00000288049;ID=exon:HG00642_ch_T0001487:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20568520	20583835	.	+	.	source_gene_common_name=ENSG00000300595;source_gene=ENSG00000300595.1;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;gene_id=HG00642_ch_G0000472;gene_biotype=lncRNA;gene_name=ENSG00000300595;gene_sources=liftoff;ID=HG00642_ch_G0000472;Name=ENSG00000300595
HG00642_chrY	CAT	transcript	20568520	20583835	1000	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00642_ch_T0001488;gene_id=HG00642_ch_G0000472;Parent=HG00642_ch_G0000472;transcript_name=HG00642_ch_T0001488;gene_name=ENSG00000300595;ID=HG00642_ch_T0001488;Name=ENSG00000300595
HG00642_chrY	CAT	exon	20568520	20568781	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00642_ch_T0001488;gene_id=HG00642_ch_G0000472;Parent=HG00642_ch_T0001488;transcript_name=HG00642_ch_T0001488;gene_name=ENSG00000300595;ID=exon:HG00642_ch_T0001488:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20568782	20583401	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00642_ch_T0001488;gene_id=HG00642_ch_G0000472;Parent=HG00642_ch_T0001488;transcript_name=HG00642_ch_T0001488;gene_name=ENSG00000300595;ID=intron:HG00642_ch_T0001488:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20583402	20583835	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00642_ch_T0001488;gene_id=HG00642_ch_G0000472;Parent=HG00642_ch_T0001488;transcript_name=HG00642_ch_T0001488;gene_name=ENSG00000300595;ID=exon:HG00642_ch_T0001488:1;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20631807	20632177	.	-	.	source_gene_common_name=ENSG00000274837;source_gene=ENSG00000274837.1;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;gene_id=HG00642_ch_G0000473;gene_biotype=processed_pseudogene;gene_name=ENSG00000274837;gene_sources=liftoff;ID=HG00642_ch_G0000473;Name=ENSG00000274837
HG00642_chrY	CAT	transcript	20631807	20632177	1000	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG00642_ch_T0001489;gene_id=HG00642_ch_G0000473;Parent=HG00642_ch_G0000473;transcript_name=HG00642_ch_T0001489;gene_name=ENSG00000274837;ID=HG00642_ch_T0001489;Name=ENSG00000274837
HG00642_chrY	CAT	exon	20631807	20632177	.	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG00642_ch_T0001489;gene_id=HG00642_ch_G0000473;Parent=HG00642_ch_T0001489;transcript_name=HG00642_ch_T0001489;gene_name=ENSG00000274837;ID=exon:HG00642_ch_T0001489:0;Name=ENSG00000274837;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20686253	20687530	.	-	.	source_gene_common_name=RCC2P2;source_gene=ENSG00000237997.1;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;gene_id=HG00642_ch_G0000474;gene_biotype=processed_pseudogene;gene_name=RCC2P2;gene_sources=liftoff;ID=HG00642_ch_G0000474;Name=RCC2P2
HG00642_chrY	CAT	transcript	20686253	20687530	1000	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00642_ch_T0001490;gene_id=HG00642_ch_G0000474;Parent=HG00642_ch_G0000474;transcript_name=HG00642_ch_T0001490;gene_name=RCC2P2;ID=HG00642_ch_T0001490;Name=RCC2P2
HG00642_chrY	CAT	exon	20686253	20686382	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00642_ch_T0001490;gene_id=HG00642_ch_G0000474;Parent=HG00642_ch_T0001490;transcript_name=HG00642_ch_T0001490;gene_name=RCC2P2;ID=exon:HG00642_ch_T0001490:0;Name=RCC2P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20686383	20686742	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00642_ch_T0001490;gene_id=HG00642_ch_G0000474;Parent=HG00642_ch_T0001490;transcript_name=HG00642_ch_T0001490;gene_name=RCC2P2;ID=intron:HG00642_ch_T0001490:0;Name=RCC2P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20686743	20687530	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00642_ch_T0001490;gene_id=HG00642_ch_G0000474;Parent=HG00642_ch_T0001490;transcript_name=HG00642_ch_T0001490;gene_name=RCC2P2;ID=exon:HG00642_ch_T0001490:1;Name=RCC2P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	20700863	20711883	.	-	.	source_gene_common_name=ZNF886P;source_gene=ENSG00000232522.1;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;gene_id=HG00642_ch_G0000475;gene_biotype=unprocessed_pseudogene;gene_name=ZNF886P;gene_sources=liftoff;ID=HG00642_ch_G0000475;Name=ZNF886P
HG00642_chrY	CAT	transcript	20700863	20711883	1000	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_G0000475;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=HG00642_ch_T0001491;Name=ZNF886P
HG00642_chrY	CAT	exon	20700863	20701377	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_T0001491;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=exon:HG00642_ch_T0001491:0;Name=ZNF886P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20701378	20705416	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_T0001491;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=intron:HG00642_ch_T0001491:0;Name=ZNF886P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20705417	20705505	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_T0001491;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=exon:HG00642_ch_T0001491:1;Name=ZNF886P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	20705506	20711764	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_T0001491;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=intron:HG00642_ch_T0001491:1;Name=ZNF886P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	20711765	20711883	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00642_ch_T0001491;gene_id=HG00642_ch_G0000475;Parent=HG00642_ch_T0001491;transcript_name=HG00642_ch_T0001491;gene_name=ZNF886P;ID=exon:HG00642_ch_T0001491:2;Name=ZNF886P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21195578	21202323	.	+	.	source_gene_common_name=ZNF885P;source_gene=ENSG00000228764.1;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;gene_id=HG00642_ch_G0000476;gene_biotype=processed_pseudogene;gene_name=ZNF885P;gene_sources=liftoff;ID=HG00642_ch_G0000476;Name=ZNF885P
HG00642_chrY	CAT	transcript	21195578	21202323	1000	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_G0000476;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=HG00642_ch_T0001492;Name=ZNF885P
HG00642_chrY	CAT	exon	21195578	21195637	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_T0001492;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=exon:HG00642_ch_T0001492:0;Name=ZNF885P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21195638	21201034	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_T0001492;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=intron:HG00642_ch_T0001492:0;Name=ZNF885P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21201035	21201546	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_T0001492;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=exon:HG00642_ch_T0001492:1;Name=ZNF885P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21201547	21201797	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_T0001492;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=intron:HG00642_ch_T0001492:1;Name=ZNF885P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21201798	21202323	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00642_ch_T0001492;gene_id=HG00642_ch_G0000476;Parent=HG00642_ch_T0001492;transcript_name=HG00642_ch_T0001492;gene_name=ZNF885P;ID=exon:HG00642_ch_T0001492:2;Name=ZNF885P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21270437	21381031	.	-	.	source_gene_common_name=TTTY10;source_gene=ENSG00000229236.4;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;gene_id=HG00642_ch_G0000477;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG00642_ch_G0000477;Name=TTTY10
HG00642_chrY	CAT	transcript	21270437	21381009	1000	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=HG00642_ch_T0001493;Name=TTTY10
HG00642_chrY	CAT	exon	21270437	21271343	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=exon:HG00642_ch_T0001493:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=intron:HG00642_ch_T0001493:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=exon:HG00642_ch_T0001493:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=intron:HG00642_ch_T0001493:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=exon:HG00642_ch_T0001493:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21312862	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=intron:HG00642_ch_T0001493:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=exon:HG00642_ch_T0001493:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21380617	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=intron:HG00642_ch_T0001493:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381009	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00642_ch_T0001493;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001493;transcript_name=HG00642_ch_T0001493;gene_name=TTTY10;ID=exon:HG00642_ch_T0001493:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270437	21381027	1000	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=HG00642_ch_T0001494;Name=TTTY10
HG00642_chrY	CAT	exon	21270437	21271343	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21323840	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21323841	21324546	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324547	21324744	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324745	21326642	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=intron:HG00642_ch_T0001494:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381027	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00642_ch_T0001494;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001494;transcript_name=HG00642_ch_T0001494;gene_name=TTTY10;ID=exon:HG00642_ch_T0001494:9;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270437	21381009	1000	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=HG00642_ch_T0001495;Name=TTTY10
HG00642_chrY	CAT	exon	21270437	21271343	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21326642	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=intron:HG00642_ch_T0001495:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381009	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00642_ch_T0001495;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001495;transcript_name=HG00642_ch_T0001495;gene_name=TTTY10;ID=exon:HG00642_ch_T0001495:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270510	21380734	1000	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=HG00642_ch_T0001496;Name=TTTY10
HG00642_chrY	CAT	exon	21270510	21271343	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21323840	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21323841	21324546	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324547	21324744	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324745	21326642	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21380617	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=intron:HG00642_ch_T0001496:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380734	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00642_ch_T0001496;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001496;transcript_name=HG00642_ch_T0001496;gene_name=TTTY10;ID=exon:HG00642_ch_T0001496:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270601	21380768	1000	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=HG00642_ch_T0001497;Name=TTTY10
HG00642_chrY	CAT	exon	21270601	21271343	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=intron:HG00642_ch_T0001497:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=intron:HG00642_ch_T0001497:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=intron:HG00642_ch_T0001497:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=intron:HG00642_ch_T0001497:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21380617	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=intron:HG00642_ch_T0001497:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380768	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00642_ch_T0001497;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001497;transcript_name=HG00642_ch_T0001497;gene_name=TTTY10;ID=exon:HG00642_ch_T0001497:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270837	21380874	1000	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=HG00642_ch_T0001498;Name=TTTY10
HG00642_chrY	CAT	exon	21270837	21271343	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21323840	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21323841	21324398	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324399	21324511	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324512	21326642	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21370579	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21370580	21370703	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:9;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21370704	21380617	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=intron:HG00642_ch_T0001498:9;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380874	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00642_ch_T0001498;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001498;transcript_name=HG00642_ch_T0001498;gene_name=TTTY10;ID=exon:HG00642_ch_T0001498:10;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21270885	21380768	1000	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=HG00642_ch_T0001499;Name=TTTY10
HG00642_chrY	CAT	exon	21270885	21271343	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21312862	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21326642	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=intron:HG00642_ch_T0001499:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380768	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00642_ch_T0001499;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001499;transcript_name=HG00642_ch_T0001499;gene_name=TTTY10;ID=exon:HG00642_ch_T0001499:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21271189	21324739	1000	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=HG00642_ch_T0001500;Name=TTTY10
HG00642_chrY	CAT	exon	21271189	21271343	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21271344	21271948	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=intron:HG00642_ch_T0001500:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21271949	21272188	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=intron:HG00642_ch_T0001500:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=intron:HG00642_ch_T0001500:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=intron:HG00642_ch_T0001500:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=intron:HG00642_ch_T0001500:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21324739	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00642_ch_T0001500;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001500;transcript_name=HG00642_ch_T0001500;gene_name=TTTY10;ID=exon:HG00642_ch_T0001500:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21271696	21381003	1000	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=HG00642_ch_T0001501;Name=TTTY10
HG00642_chrY	CAT	exon	21271696	21272188	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21312862	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21312863	21312967	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21323840	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21323841	21324398	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324399	21324511	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324512	21326642	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=intron:HG00642_ch_T0001501:7;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381003	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00642_ch_T0001501;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001501;transcript_name=HG00642_ch_T0001501;gene_name=TTTY10;ID=exon:HG00642_ch_T0001501:8;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21272013	21276665	1000	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=HG00642_ch_T0001502;Name=TTTY10
HG00642_chrY	CAT	exon	21272013	21272188	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=exon:HG00642_ch_T0001502:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21272189	21273709	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=intron:HG00642_ch_T0001502:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21273710	21273769	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=exon:HG00642_ch_T0001502:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21273770	21275392	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=intron:HG00642_ch_T0001502:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21275393	21275502	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=exon:HG00642_ch_T0001502:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21275503	21276281	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=intron:HG00642_ch_T0001502:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21276282	21276665	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00642_ch_T0001502;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001502;transcript_name=HG00642_ch_T0001502;gene_name=TTTY10;ID=exon:HG00642_ch_T0001502:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21308720	21380843	1000	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00642_ch_T0001503;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001503;gene_name=TTTY10;ID=HG00642_ch_T0001503;Name=TTTY10
HG00642_chrY	CAT	exon	21308720	21312967	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00642_ch_T0001503;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001503;transcript_name=HG00642_ch_T0001503;gene_name=TTTY10;ID=exon:HG00642_ch_T0001503:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21380617	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00642_ch_T0001503;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001503;transcript_name=HG00642_ch_T0001503;gene_name=TTTY10;ID=intron:HG00642_ch_T0001503:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380843	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00642_ch_T0001503;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001503;transcript_name=HG00642_ch_T0001503;gene_name=TTTY10;ID=exon:HG00642_ch_T0001503:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21309987	21324367	1000	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00642_ch_T0001504;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001504;gene_name=TTTY10;ID=HG00642_ch_T0001504;Name=TTTY10
HG00642_chrY	CAT	exon	21309987	21312967	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00642_ch_T0001504;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001504;transcript_name=HG00642_ch_T0001504;gene_name=TTTY10;ID=exon:HG00642_ch_T0001504:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00642_ch_T0001504;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001504;transcript_name=HG00642_ch_T0001504;gene_name=TTTY10;ID=intron:HG00642_ch_T0001504:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21324367	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00642_ch_T0001504;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001504;transcript_name=HG00642_ch_T0001504;gene_name=TTTY10;ID=exon:HG00642_ch_T0001504:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21312278	21380657	1000	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=HG00642_ch_T0001505;Name=TTTY10
HG00642_chrY	CAT	exon	21312278	21312967	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=exon:HG00642_ch_T0001505:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21324546	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=intron:HG00642_ch_T0001505:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324547	21324744	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=exon:HG00642_ch_T0001505:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324745	21326642	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=intron:HG00642_ch_T0001505:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=exon:HG00642_ch_T0001505:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=intron:HG00642_ch_T0001505:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=exon:HG00642_ch_T0001505:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=intron:HG00642_ch_T0001505:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380657	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00642_ch_T0001505;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001505;transcript_name=HG00642_ch_T0001505;gene_name=TTTY10;ID=exon:HG00642_ch_T0001505:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21312280	21381031	1000	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=HG00642_ch_T0001506;Name=TTTY10
HG00642_chrY	CAT	exon	21312280	21312967	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=exon:HG00642_ch_T0001506:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21324546	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=intron:HG00642_ch_T0001506:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324547	21324744	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=exon:HG00642_ch_T0001506:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324745	21326642	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=intron:HG00642_ch_T0001506:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=exon:HG00642_ch_T0001506:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21380617	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=intron:HG00642_ch_T0001506:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381031	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00642_ch_T0001506;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001506;transcript_name=HG00642_ch_T0001506;gene_name=TTTY10;ID=exon:HG00642_ch_T0001506:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21312593	21380657	1000	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=HG00642_ch_T0001507;Name=TTTY10
HG00642_chrY	CAT	exon	21312593	21312967	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21312968	21323781	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21323782	21323840	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21323841	21324398	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21324399	21324511	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324512	21326642	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21332705	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21332706	21332797	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21332798	21380617	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=intron:HG00642_ch_T0001507:5;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380657	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00642_ch_T0001507;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001507;transcript_name=HG00642_ch_T0001507;gene_name=TTTY10;ID=exon:HG00642_ch_T0001507:6;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21324621	21380995	1000	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=HG00642_ch_T0001508;Name=TTTY10
HG00642_chrY	CAT	exon	21324621	21324744	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=exon:HG00642_ch_T0001508:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21324745	21326642	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=intron:HG00642_ch_T0001508:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21326643	21326811	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=exon:HG00642_ch_T0001508:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=intron:HG00642_ch_T0001508:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=exon:HG00642_ch_T0001508:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21332705	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=intron:HG00642_ch_T0001508:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21332706	21332797	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=exon:HG00642_ch_T0001508:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21332798	21380617	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=intron:HG00642_ch_T0001508:3;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21380995	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00642_ch_T0001508;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001508;transcript_name=HG00642_ch_T0001508;gene_name=TTTY10;ID=exon:HG00642_ch_T0001508:4;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21326223	21381009	1000	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=HG00642_ch_T0001509;Name=TTTY10
HG00642_chrY	CAT	exon	21326223	21326811	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001509;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=exon:HG00642_ch_T0001509:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21326812	21329778	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001509;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=intron:HG00642_ch_T0001509:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21329779	21329951	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001509;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=exon:HG00642_ch_T0001509:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21329952	21380617	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001509;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=intron:HG00642_ch_T0001509:1;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21380618	21381009	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00642_ch_T0001509;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001509;transcript_name=HG00642_ch_T0001509;gene_name=TTTY10;ID=exon:HG00642_ch_T0001509:2;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21380444	21380995	1000	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG00642_ch_T0001511;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_G0000477;transcript_name=HG00642_ch_T0001511;gene_name=TTTY10;ID=HG00642_ch_T0001511;Name=TTTY10
HG00642_chrY	CAT	exon	21380444	21380995	.	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG00642_ch_T0001511;gene_id=HG00642_ch_G0000477;Parent=HG00642_ch_T0001511;transcript_name=HG00642_ch_T0001511;gene_name=TTTY10;ID=exon:HG00642_ch_T0001511:0;Name=TTTY10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21375734	21376031	.	-	.	source_gene_common_name=KDM5DP1;source_gene=ENSG00000277438.1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;gene_id=HG00642_ch_G0000478;gene_biotype=processed_pseudogene;gene_name=KDM5DP1;gene_sources=liftoff;ID=HG00642_ch_G0000478;Name=KDM5DP1
HG00642_chrY	CAT	transcript	21375734	21376031	1000	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG00642_ch_T0001510;gene_id=HG00642_ch_G0000478;Parent=HG00642_ch_G0000478;transcript_name=HG00642_ch_T0001510;gene_name=KDM5DP1;ID=HG00642_ch_T0001510;Name=KDM5DP1
HG00642_chrY	CAT	exon	21375734	21376031	.	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG00642_ch_T0001510;gene_id=HG00642_ch_G0000478;Parent=HG00642_ch_T0001510;transcript_name=HG00642_ch_T0001510;gene_name=KDM5DP1;ID=exon:HG00642_ch_T0001510:0;Name=KDM5DP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21381288	21398667	.	+	.	source_gene_common_name=EIF1AY;source_gene=ENSG00000198692.10;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;gene_id=HG00642_ch_G0000479;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff;ID=HG00642_ch_G0000479;Name=EIF1AY
HG00642_chrY	CAT	transcript	21381288	21398667	100	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_G0000479;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=HG00642_ch_T0001512;Name=EIF1AY
HG00642_chrY	CAT	exon	21381288	21381399	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21381384	21381399	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	21381384	21381386	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=start_codon:HG00642_ch_T0001512;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21381400	21385119	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21385120	21385203	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21385120	21385203	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21385204	21388101	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21388102	21388205	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21388102	21388205	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21388206	21389986	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21389987	21390037	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21389987	21390037	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21390038	21393536	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21393537	21393618	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21393537	21393618	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21393619	21394996	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21394997	21395088	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21394997	21395088	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21395089	21397853	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001512:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21397854	21398667	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001512:6;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21397854	21397859	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001512:6;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	21397857	21397859	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00642_ch_T0001512;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001512;transcript_name=HG00642_ch_T0001512;gene_name=EIF1AY;ID=stop_codon:HG00642_ch_T0001512;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21381290	21394042	1000	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_G0000479;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=HG00642_ch_T0001513;Name=EIF1AY
HG00642_chrY	CAT	exon	21381290	21381399	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001513:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21381400	21385119	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001513:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21385120	21385203	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001513:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21385204	21388101	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001513:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21388102	21388205	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001513:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21388206	21389986	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001513:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21389987	21390037	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001513:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21390038	21393536	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001513:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21393537	21394042	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00642_ch_T0001513;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001513;transcript_name=HG00642_ch_T0001513;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001513:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21381306	21398143	100	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_G0000479;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=HG00642_ch_T0001514;Name=EIF1AY
HG00642_chrY	CAT	exon	21381306	21381399	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21381384	21381399	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	21381384	21381386	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=start_codon:HG00642_ch_T0001514;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21381400	21385119	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001514:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21385120	21385203	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21385120	21385203	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21385204	21388101	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001514:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21388102	21388205	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21388102	21388205	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21388206	21393536	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001514:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21393537	21393618	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21393537	21393618	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21393619	21394996	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001514:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21394997	21395088	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21394997	21395088	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21395089	21397853	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001514:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21397854	21398143	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001514:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21397854	21397859	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=CDS:HG00642_ch_T0001514:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	21397857	21397859	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00642_ch_T0001514;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001514;transcript_name=HG00642_ch_T0001514;gene_name=EIF1AY;ID=stop_codon:HG00642_ch_T0001514;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21392231	21398143	1000	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00642_ch_T0001515;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_G0000479;transcript_name=HG00642_ch_T0001515;gene_name=EIF1AY;ID=HG00642_ch_T0001515;Name=EIF1AY
HG00642_chrY	CAT	exon	21392231	21395088	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00642_ch_T0001515;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001515;transcript_name=HG00642_ch_T0001515;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001515:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21395089	21397853	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00642_ch_T0001515;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001515;transcript_name=HG00642_ch_T0001515;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001515:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21397854	21398143	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00642_ch_T0001515;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001515;transcript_name=HG00642_ch_T0001515;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001515:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21393360	21398143	1000	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_G0000479;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=HG00642_ch_T0001516;Name=EIF1AY
HG00642_chrY	CAT	exon	21393360	21393618	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001516;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001516:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21393619	21394996	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001516;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001516:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21394997	21395088	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001516;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001516:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21395089	21397853	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001516;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=intron:HG00642_ch_T0001516:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21397854	21398143	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00642_ch_T0001516;gene_id=HG00642_ch_G0000479;Parent=HG00642_ch_T0001516;transcript_name=HG00642_ch_T0001516;gene_name=EIF1AY;ID=exon:HG00642_ch_T0001516:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21530872	21540075	.	-	.	source_gene_common_name=ENSG00000286247;source_gene=ENSG00000286247.2;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;gene_id=HG00642_ch_G0000480;gene_biotype=lncRNA;gene_name=ENSG00000286247;gene_sources=liftoff;ID=HG00642_ch_G0000480;Name=ENSG00000286247
HG00642_chrY	CAT	transcript	21530872	21540075	1000	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00642_ch_T0001517;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_G0000480;transcript_name=HG00642_ch_T0001517;gene_name=ENSG00000286247;ID=HG00642_ch_T0001517;Name=ENSG00000286247
HG00642_chrY	CAT	exon	21530872	21531638	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00642_ch_T0001517;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001517;transcript_name=HG00642_ch_T0001517;gene_name=ENSG00000286247;ID=exon:HG00642_ch_T0001517:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21531639	21540017	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00642_ch_T0001517;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001517;transcript_name=HG00642_ch_T0001517;gene_name=ENSG00000286247;ID=intron:HG00642_ch_T0001517:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21540018	21540075	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00642_ch_T0001517;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001517;transcript_name=HG00642_ch_T0001517;gene_name=ENSG00000286247;ID=exon:HG00642_ch_T0001517:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21531343	21532821	1000	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00642_ch_T0001518;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_G0000480;transcript_name=HG00642_ch_T0001518;gene_name=ENSG00000286247;ID=HG00642_ch_T0001518;Name=ENSG00000286247
HG00642_chrY	CAT	exon	21531343	21531638	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00642_ch_T0001518;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001518;transcript_name=HG00642_ch_T0001518;gene_name=ENSG00000286247;ID=exon:HG00642_ch_T0001518:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21531639	21532747	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00642_ch_T0001518;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001518;transcript_name=HG00642_ch_T0001518;gene_name=ENSG00000286247;ID=intron:HG00642_ch_T0001518:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21532748	21532821	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00642_ch_T0001518;gene_id=HG00642_ch_G0000480;Parent=HG00642_ch_T0001518;transcript_name=HG00642_ch_T0001518;gene_name=ENSG00000286247;ID=exon:HG00642_ch_T0001518:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21532795	21548449	.	+	.	source_gene_common_name=TBL1YP1;source_gene=ENSG00000225624.1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;gene_id=HG00642_ch_G0000481;gene_biotype=unprocessed_pseudogene;gene_name=TBL1YP1;gene_sources=liftoff;ID=HG00642_ch_G0000481;Name=TBL1YP1
HG00642_chrY	CAT	transcript	21532795	21548449	1000	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_G0000481;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=HG00642_ch_T0001519;Name=TBL1YP1
HG00642_chrY	CAT	exon	21532795	21533038	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21533039	21534941	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21534942	21535072	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21535073	21535463	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21535464	21535611	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21535612	21536309	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21536310	21536373	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21536374	21536482	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21536483	21536581	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21536582	21539631	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21539632	21539699	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21539700	21546448	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21546449	21546522	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21546523	21546859	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21546860	21546984	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21546985	21548376	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=intron:HG00642_ch_T0001519:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21548377	21548449	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00642_ch_T0001519;gene_id=HG00642_ch_G0000481;Parent=HG00642_ch_T0001519;transcript_name=HG00642_ch_T0001519;gene_name=TBL1YP1;ID=exon:HG00642_ch_T0001519:8;Name=TBL1YP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21561657	21586581	.	+	.	source_gene_common_name=RPS4Y2;source_gene=ENSG00000280969.2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;gene_id=HG00642_ch_G0000482;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff;ID=HG00642_ch_G0000482;Name=RPS4Y2
HG00642_chrY	CAT	transcript	21561657	21586581	100	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_G0000482;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=HG00642_ch_T0001520;Name=RPS4Y2
HG00642_chrY	CAT	exon	21561657	21561715	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21561713	21561715	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	21561713	21561715	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=start_codon:HG00642_ch_T0001520;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21561716	21562326	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21562327	21562404	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21562327	21562404	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21562405	21565416	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21565417	21565597	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21565417	21565597	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21565598	21566832	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21566833	21566930	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21566833	21566930	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21566931	21574353	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21574354	21574525	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21574354	21574525	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21574526	21585057	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21585058	21585215	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21585058	21585215	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21585216	21586479	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=intron:HG00642_ch_T0001520:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21586480	21586581	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=exon:HG00642_ch_T0001520:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	21586480	21586581	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=CDS:HG00642_ch_T0001520:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	21586579	21586581	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00642_ch_T0001520;gene_id=HG00642_ch_G0000482;Parent=HG00642_ch_T0001520;transcript_name=HG00642_ch_T0001520;gene_name=RPS4Y2;ID=stop_codon:HG00642_ch_T0001520;Name=RPS4Y2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21614325	21617358	.	-	.	source_gene_common_name=HSFY4P;source_gene=ENSG00000224482.1;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;gene_id=HG00642_ch_G0000483;gene_biotype=unprocessed_pseudogene;gene_name=HSFY4P;gene_sources=liftoff;ID=HG00642_ch_G0000483;Name=HSFY4P
HG00642_chrY	CAT	transcript	21614325	21617358	1000	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00642_ch_T0001521;gene_id=HG00642_ch_G0000483;Parent=HG00642_ch_G0000483;transcript_name=HG00642_ch_T0001521;gene_name=HSFY4P;ID=HG00642_ch_T0001521;Name=HSFY4P
HG00642_chrY	CAT	exon	21614325	21615014	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00642_ch_T0001521;gene_id=HG00642_ch_G0000483;Parent=HG00642_ch_T0001521;transcript_name=HG00642_ch_T0001521;gene_name=HSFY4P;ID=exon:HG00642_ch_T0001521:0;Name=HSFY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21615015	21616867	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00642_ch_T0001521;gene_id=HG00642_ch_G0000483;Parent=HG00642_ch_T0001521;transcript_name=HG00642_ch_T0001521;gene_name=HSFY4P;ID=intron:HG00642_ch_T0001521:0;Name=HSFY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21616868	21617358	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00642_ch_T0001521;gene_id=HG00642_ch_G0000483;Parent=HG00642_ch_T0001521;transcript_name=HG00642_ch_T0001521;gene_name=HSFY4P;ID=exon:HG00642_ch_T0001521:1;Name=HSFY4P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21648802	21649256	.	-	.	source_gene_common_name=ENSG00000216844;source_gene=ENSG00000216844.1;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;gene_id=HG00642_ch_G0000484;gene_biotype=processed_pseudogene;gene_name=ENSG00000216844;gene_sources=liftoff;ID=HG00642_ch_G0000484;Name=ENSG00000216844
HG00642_chrY	CAT	transcript	21648802	21649256	1000	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG00642_ch_T0001522;gene_id=HG00642_ch_G0000484;Parent=HG00642_ch_G0000484;transcript_name=HG00642_ch_T0001522;gene_name=ENSG00000216844;ID=HG00642_ch_T0001522;Name=ENSG00000216844
HG00642_chrY	CAT	exon	21648802	21649256	.	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG00642_ch_T0001522;gene_id=HG00642_ch_G0000484;Parent=HG00642_ch_T0001522;transcript_name=HG00642_ch_T0001522;gene_name=ENSG00000216844;ID=exon:HG00642_ch_T0001522:0;Name=ENSG00000216844;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21666883	21667883	.	+	.	source_gene_common_name=GAPDHP17;source_gene=ENSG00000229551.2;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;gene_id=HG00642_ch_G0000485;gene_biotype=processed_pseudogene;gene_name=GAPDHP17;gene_sources=liftoff;ID=HG00642_ch_G0000485;Name=GAPDHP17
HG00642_chrY	CAT	transcript	21666883	21667883	1000	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG00642_ch_T0001523;gene_id=HG00642_ch_G0000485;Parent=HG00642_ch_G0000485;transcript_name=HG00642_ch_T0001523;gene_name=GAPDHP17;ID=HG00642_ch_T0001523;Name=GAPDHP17
HG00642_chrY	CAT	exon	21666883	21667883	.	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG00642_ch_T0001523;gene_id=HG00642_ch_G0000485;Parent=HG00642_ch_T0001523;transcript_name=HG00642_ch_T0001523;gene_name=GAPDHP17;ID=exon:HG00642_ch_T0001523:0;Name=GAPDHP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21712888	21713106	.	-	.	source_gene_common_name=TMEM167AP1;source_gene=ENSG00000226504.1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;gene_id=HG00642_ch_G0000486;gene_biotype=processed_pseudogene;gene_name=TMEM167AP1;gene_sources=liftoff;ID=HG00642_ch_G0000486;Name=TMEM167AP1
HG00642_chrY	CAT	transcript	21712888	21713106	1000	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG00642_ch_T0001524;gene_id=HG00642_ch_G0000486;Parent=HG00642_ch_G0000486;transcript_name=HG00642_ch_T0001524;gene_name=TMEM167AP1;ID=HG00642_ch_T0001524;Name=TMEM167AP1
HG00642_chrY	CAT	exon	21712888	21713106	.	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG00642_ch_T0001524;gene_id=HG00642_ch_G0000486;Parent=HG00642_ch_T0001524;transcript_name=HG00642_ch_T0001524;gene_name=TMEM167AP1;ID=exon:HG00642_ch_T0001524:0;Name=TMEM167AP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21843834	21850269	.	-	.	source_gene_common_name=ENSG00000254488;source_gene=ENSG00000254488.1;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;gene_id=HG00642_ch_G0000487;gene_biotype=lncRNA;gene_name=ENSG00000254488;gene_sources=liftoff;ID=HG00642_ch_G0000487;Name=ENSG00000254488
HG00642_chrY	CAT	transcript	21843834	21850269	1000	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_G0000487;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=HG00642_ch_T0001525;Name=ENSG00000254488
HG00642_chrY	CAT	exon	21843834	21844589	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_T0001525;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=exon:HG00642_ch_T0001525:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21844590	21847813	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_T0001525;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=intron:HG00642_ch_T0001525:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21847814	21847914	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_T0001525;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=exon:HG00642_ch_T0001525:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21847915	21850143	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_T0001525;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=intron:HG00642_ch_T0001525:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21850144	21850269	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=HG00642_ch_T0001525;gene_id=HG00642_ch_G0000487;Parent=HG00642_ch_T0001525;transcript_name=HG00642_ch_T0001525;gene_name=ENSG00000254488;ID=exon:HG00642_ch_T0001525:2;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21936412	21936723	.	+	.	source_gene_common_name=TOMM22P1;source_gene=ENSG00000237427.1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;gene_id=HG00642_ch_G0000488;gene_biotype=processed_pseudogene;gene_name=TOMM22P1;gene_sources=liftoff;ID=HG00642_ch_G0000488;Name=TOMM22P1
HG00642_chrY	CAT	transcript	21936412	21936723	1000	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG00642_ch_T0001526;gene_id=HG00642_ch_G0000488;Parent=HG00642_ch_G0000488;transcript_name=HG00642_ch_T0001526;gene_name=TOMM22P1;ID=HG00642_ch_T0001526;Name=TOMM22P1
HG00642_chrY	CAT	exon	21936412	21936723	.	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG00642_ch_T0001526;gene_id=HG00642_ch_G0000488;Parent=HG00642_ch_T0001526;transcript_name=HG00642_ch_T0001526;gene_name=TOMM22P1;ID=exon:HG00642_ch_T0001526:0;Name=TOMM22P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21940783	21943387	.	-	.	source_gene_common_name=ENSG00000297760;source_gene=ENSG00000297760.1;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;gene_id=HG00642_ch_G0000489;gene_biotype=lncRNA;gene_name=ENSG00000297760;gene_sources=liftoff;ID=HG00642_ch_G0000489;Name=ENSG00000297760
HG00642_chrY	CAT	transcript	21940783	21943387	1000	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00642_ch_T0001527;gene_id=HG00642_ch_G0000489;Parent=HG00642_ch_G0000489;transcript_name=HG00642_ch_T0001527;gene_name=ENSG00000297760;ID=HG00642_ch_T0001527;Name=ENSG00000297760
HG00642_chrY	CAT	exon	21940783	21942248	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00642_ch_T0001527;gene_id=HG00642_ch_G0000489;Parent=HG00642_ch_T0001527;transcript_name=HG00642_ch_T0001527;gene_name=ENSG00000297760;ID=exon:HG00642_ch_T0001527:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21942249	21943280	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00642_ch_T0001527;gene_id=HG00642_ch_G0000489;Parent=HG00642_ch_T0001527;transcript_name=HG00642_ch_T0001527;gene_name=ENSG00000297760;ID=intron:HG00642_ch_T0001527:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21943281	21943387	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00642_ch_T0001527;gene_id=HG00642_ch_G0000489;Parent=HG00642_ch_T0001527;transcript_name=HG00642_ch_T0001527;gene_name=ENSG00000297760;ID=exon:HG00642_ch_T0001527:1;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	21944167	22063361	.	+	.	source_gene_common_name=ENSG00000289707;source_gene=ENSG00000289707.2;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;gene_id=HG00642_ch_G0000490;gene_biotype=lncRNA;gene_name=ENSG00000289707;gene_sources=liftoff;ID=HG00642_ch_G0000490;Name=ENSG00000289707
HG00642_chrY	CAT	transcript	21944167	21979127	1000	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_G0000490;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=HG00642_ch_T0001528;Name=ENSG00000289707
HG00642_chrY	CAT	exon	21944167	21944402	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001528:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21944403	21953952	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001528:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21953953	21954047	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001528:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21954048	21957118	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001528:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21957119	21957172	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001528:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21957173	21958368	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001528:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21958369	21958503	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001528:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21958504	21975489	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001528:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21975490	21979127	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00642_ch_T0001528;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001528;transcript_name=HG00642_ch_T0001528;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001528:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	21944167	22063361	1000	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_G0000490;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=HG00642_ch_T0001529;Name=ENSG00000289707
HG00642_chrY	CAT	exon	21944167	21944402	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21944403	21953952	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21953953	21954047	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21954048	21957118	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21957119	21957172	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21957173	21958368	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	21958369	21958503	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	21958504	22002673	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22002674	22002737	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22002738	22033885	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22033886	22033993	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22033994	22056082	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22056083	22056241	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22056242	22058655	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22058656	22058726	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22058727	22060948	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001529:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22060949	22063361	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00642_ch_T0001529;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001529;transcript_name=HG00642_ch_T0001529;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001529:8;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22033671	22058726	1000	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_G0000490;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=HG00642_ch_T0001531;Name=ENSG00000289707
HG00642_chrY	CAT	exon	22033671	22033708	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001531:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22033709	22033885	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001531:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22033886	22033993	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001531:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22033994	22056082	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001531:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22056083	22056241	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001531:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22056242	22058655	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=intron:HG00642_ch_T0001531:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22058656	22058726	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00642_ch_T0001531;gene_id=HG00642_ch_G0000490;Parent=HG00642_ch_T0001531;transcript_name=HG00642_ch_T0001531;gene_name=ENSG00000289707;ID=exon:HG00642_ch_T0001531:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22026640	22027623	.	-	.	source_gene_common_name=NEFLP1;source_gene=ENSG00000232634.1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;gene_id=HG00642_ch_G0000491;gene_biotype=processed_pseudogene;gene_name=NEFLP1;gene_sources=liftoff;ID=HG00642_ch_G0000491;Name=NEFLP1
HG00642_chrY	CAT	transcript	22026640	22027623	1000	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG00642_ch_T0001530;gene_id=HG00642_ch_G0000491;Parent=HG00642_ch_G0000491;transcript_name=HG00642_ch_T0001530;gene_name=NEFLP1;ID=HG00642_ch_T0001530;Name=NEFLP1
HG00642_chrY	CAT	exon	22026640	22027623	.	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG00642_ch_T0001530;gene_id=HG00642_ch_G0000491;Parent=HG00642_ch_T0001530;transcript_name=HG00642_ch_T0001530;gene_name=NEFLP1;ID=exon:HG00642_ch_T0001530:0;Name=NEFLP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22116798	22124425	.	+	.	source_gene_common_name=ENSG00000226918;source_gene=ENSG00000226918.1;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;gene_id=HG00642_ch_G0000492;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000226918;gene_sources=liftoff;ID=HG00642_ch_G0000492;Name=ENSG00000226918
HG00642_chrY	CAT	transcript	22116798	22124425	1000	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_G0000492;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=HG00642_ch_T0001532;Name=ENSG00000226918
HG00642_chrY	CAT	exon	22116798	22116906	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22116907	22117351	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22117352	22117530	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22117531	22119707	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22119708	22119825	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22119826	22120136	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22120137	22120167	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22120168	22122163	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22122164	22122278	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22122279	22123145	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22123146	22123256	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22123257	22123337	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22123338	22123426	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22123427	22123849	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22123850	22124027	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22124028	22124303	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=intron:HG00642_ch_T0001532:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22124304	22124425	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00642_ch_T0001532;gene_id=HG00642_ch_G0000492;Parent=HG00642_ch_T0001532;transcript_name=HG00642_ch_T0001532;gene_name=ENSG00000226918;ID=exon:HG00642_ch_T0001532:8;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22188486	22191892	.	-	.	source_gene_common_name=PRORY;source_gene=ENSG00000183146.4;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;gene_id=HG00642_ch_G0000493;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG00642_ch_G0000493;Name=PRORY
HG00642_chrY	CAT	transcript	22188486	22191892	1000	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_G0000493;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=HG00642_ch_T0001533;Name=PRORY
HG00642_chrY	CAT	exon	22188486	22188812	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=exon:HG00642_ch_T0001533:0;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22188813	22188963	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=intron:HG00642_ch_T0001533:0;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22188964	22189328	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=exon:HG00642_ch_T0001533:1;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22189329	22189444	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=intron:HG00642_ch_T0001533:1;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22189445	22189501	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=exon:HG00642_ch_T0001533:2;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22189502	22191763	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=intron:HG00642_ch_T0001533:2;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22191764	22191892	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00642_ch_T0001533;gene_id=HG00642_ch_G0000493;Parent=HG00642_ch_T0001533;transcript_name=HG00642_ch_T0001533;gene_name=PRORY;ID=exon:HG00642_ch_T0001533:3;Name=PRORY;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22200169	22257460	.	-	.	source_gene_common_name=ENSG00000293672;source_gene=ENSG00000293672.1;gene_id=HG00642_ch_G0000494;gene_biotype=lncRNA;gene_name=ENSG00000293672;gene_sources=liftoff;ID=HG00642_ch_G0000494;Name=ENSG00000293672
HG00642_chrY	CAT	transcript	22200169	22257460	1000	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_G0000494;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=HG00642_ch_T0001534;Name=ENSG00000293672
HG00642_chrY	CAT	exon	22200169	22200823	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_T0001534;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=exon:HG00642_ch_T0001534:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22200824	22201231	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_T0001534;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=intron:HG00642_ch_T0001534:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201232	22201320	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_T0001534;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=exon:HG00642_ch_T0001534:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201321	22257175	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_T0001534;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=intron:HG00642_ch_T0001534:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22257176	22257460	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00642_ch_T0001534;gene_id=HG00642_ch_G0000494;Parent=HG00642_ch_T0001534;transcript_name=HG00642_ch_T0001534;gene_name=ENSG00000293672;ID=exon:HG00642_ch_T0001534:2;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22200240	22210303	.	-	.	source_gene_common_name=ENSG00000290954;source_gene=ENSG00000290954.2;gene_id=HG00642_ch_G0000495;gene_biotype=lncRNA;gene_name=ENSG00000290954;gene_sources=liftoff;ID=HG00642_ch_G0000495;Name=ENSG00000290954
HG00642_chrY	CAT	transcript	22200240	22210269	1000	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_G0000495;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=HG00642_ch_T0001535;Name=ENSG00000290954
HG00642_chrY	CAT	exon	22200240	22200823	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22200824	22201231	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001535:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201232	22201320	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201321	22201402	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001535:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201403	22201513	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201514	22207008	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001535:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22207009	22207121	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22207122	22209449	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001535:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22209450	22209514	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22209515	22210160	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001535:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22210161	22210269	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001535;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001535;transcript_name=HG00642_ch_T0001535;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001535:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22200680	22210303	1000	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_G0000495;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=HG00642_ch_T0001537;Name=ENSG00000290954
HG00642_chrY	CAT	exon	22200680	22200823	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22200824	22201231	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001537:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201232	22201320	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201321	22201402	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001537:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201403	22201513	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201514	22206454	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001537:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22206455	22206558	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22206559	22207008	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001537:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22207009	22207121	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22207122	22210160	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=intron:HG00642_ch_T0001537:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22210161	22210303	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00642_ch_T0001537;gene_id=HG00642_ch_G0000495;Parent=HG00642_ch_T0001537;transcript_name=HG00642_ch_T0001537;gene_name=ENSG00000290954;ID=exon:HG00642_ch_T0001537:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22200523	22207117	.	-	.	source_gene_common_name=RBMY2EP;source_gene=ENSG00000223637.9;gene_id=HG00642_ch_G0000496;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG00642_ch_G0000496;Name=RBMY2EP
HG00642_chrY	CAT	transcript	22200523	22207117	1000	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_G0000496;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=HG00642_ch_T0001536;Name=RBMY2EP
HG00642_chrY	CAT	exon	22200523	22200823	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22200824	22201231	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201232	22201320	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201321	22201402	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201403	22201513	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201514	22201877	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22201878	22201988	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22201989	22202869	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22202870	22202984	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22202985	22206454	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22206455	22206558	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22206559	22207008	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=intron:HG00642_ch_T0001536:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22207009	22207117	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00642_ch_T0001536;gene_id=HG00642_ch_G0000496;Parent=HG00642_ch_T0001536;transcript_name=HG00642_ch_T0001536;gene_name=RBMY2EP;ID=exon:HG00642_ch_T0001536:6;Name=RBMY2EP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22211302	22211527	.	+	.	source_gene_common_name=ENSG00000236615;source_gene=ENSG00000236615.1;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;gene_id=HG00642_ch_G0000497;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236615;gene_sources=liftoff;ID=HG00642_ch_G0000497;Name=ENSG00000236615
HG00642_chrY	CAT	transcript	22211302	22211527	1000	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG00642_ch_T0001538;gene_id=HG00642_ch_G0000497;Parent=HG00642_ch_G0000497;transcript_name=HG00642_ch_T0001538;gene_name=ENSG00000236615;ID=HG00642_ch_T0001538;Name=ENSG00000236615
HG00642_chrY	CAT	exon	22211302	22211527	.	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG00642_ch_T0001538;gene_id=HG00642_ch_G0000497;Parent=HG00642_ch_T0001538;transcript_name=HG00642_ch_T0001538;gene_name=ENSG00000236615;ID=exon:HG00642_ch_T0001538:0;Name=ENSG00000236615;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22229560	22261748	.	-	.	source_gene_common_name=ENSG00000288057;source_gene=ENSG00000288057.2;gene_id=HG00642_ch_G0000498;gene_biotype=lncRNA;gene_name=ENSG00000288057;gene_sources=liftoff;ID=HG00642_ch_G0000498;Name=ENSG00000288057
HG00642_chrY	CAT	transcript	22229560	22261748	1000	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_G0000498;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=HG00642_ch_T0001539;Name=ENSG00000288057
HG00642_chrY	CAT	exon	22229560	22231795	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001539:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22231796	22257175	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=intron:HG00642_ch_T0001539:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22257176	22257338	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001539:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22257339	22260054	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=intron:HG00642_ch_T0001539:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22260055	22260194	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001539:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22260195	22261429	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=intron:HG00642_ch_T0001539:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22261430	22261748	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001539;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001539;transcript_name=HG00642_ch_T0001539;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001539:3;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22231412	22257377	1000	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_G0000498;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=HG00642_ch_T0001540;Name=ENSG00000288057
HG00642_chrY	CAT	exon	22231412	22231795	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001540;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001540:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22231796	22236937	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001540;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=intron:HG00642_ch_T0001540:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22236938	22237026	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001540;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001540:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22237027	22257175	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001540;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=intron:HG00642_ch_T0001540:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22257176	22257377	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00642_ch_T0001540;gene_id=HG00642_ch_G0000498;Parent=HG00642_ch_T0001540;transcript_name=HG00642_ch_T0001540;gene_name=ENSG00000288057;ID=exon:HG00642_ch_T0001540:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22236229	22242777	.	-	.	source_gene_common_name=RBMY2TP;source_gene=ENSG00000237269.1;gene_id=HG00642_ch_G0000499;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2TP;gene_sources=liftoff;ID=HG00642_ch_G0000499;Name=RBMY2TP
HG00642_chrY	CAT	transcript	22236229	22242777	1000	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_G0000499;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=HG00642_ch_T0001541;Name=RBMY2TP
HG00642_chrY	CAT	exon	22236229	22236529	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22236530	22236937	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=intron:HG00642_ch_T0001541:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22236938	22237026	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22237027	22237118	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=intron:HG00642_ch_T0001541:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22237119	22237229	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22237230	22238115	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=intron:HG00642_ch_T0001541:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22238116	22238230	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22238231	22240222	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=intron:HG00642_ch_T0001541:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22240223	22240375	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22240376	22242599	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=intron:HG00642_ch_T0001541:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22242600	22242777	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00642_ch_T0001541;gene_id=HG00642_ch_G0000499;Parent=HG00642_ch_T0001541;transcript_name=HG00642_ch_T0001541;gene_name=RBMY2TP;ID=exon:HG00642_ch_T0001541:5;Name=RBMY2TP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22273690	22276215	.	+	.	source_gene_common_name=TSPY14P;source_gene=ENSG00000169849.8;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;gene_id=HG00642_ch_G0000500;gene_biotype=unprocessed_pseudogene;gene_name=TSPY14P;gene_sources=liftoff;ID=HG00642_ch_G0000500;Name=TSPY14P
HG00642_chrY	CAT	transcript	22273690	22276215	1000	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_G0000500;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=HG00642_ch_T0001542;Name=TSPY14P
HG00642_chrY	CAT	exon	22273690	22274163	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:0;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22274164	22274772	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=intron:HG00642_ch_T0001542:0;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22274773	22274850	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:1;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22274851	22274978	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=intron:HG00642_ch_T0001542:1;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22274979	22275090	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:2;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22275091	22275189	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=intron:HG00642_ch_T0001542:2;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22275190	22275335	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:3;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22275336	22275443	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=intron:HG00642_ch_T0001542:3;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22275444	22275525	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:4;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22275526	22276192	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=intron:HG00642_ch_T0001542:4;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22276193	22276215	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00642_ch_T0001542;gene_id=HG00642_ch_G0000500;Parent=HG00642_ch_T0001542;transcript_name=HG00642_ch_T0001542;gene_name=TSPY14P;ID=exon:HG00642_ch_T0001542:5;Name=TSPY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22299051	22307499	.	+	.	source_gene_common_name=RBMY1HP;source_gene=ENSG00000169811.8;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;gene_id=HG00642_ch_G0000501;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1HP;gene_sources=liftoff;ID=HG00642_ch_G0000501;Name=RBMY1HP
HG00642_chrY	CAT	transcript	22299051	22307499	1000	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_G0000501;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=HG00642_ch_T0001543;Name=RBMY1HP
HG00642_chrY	CAT	exon	22299051	22299228	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22299229	22301141	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22301142	22301294	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22301295	22303304	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22303305	22303419	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22303420	22304374	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22304375	22304485	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22304486	22304926	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22304927	22305037	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22305038	22305471	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22305472	22305582	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22305583	22306015	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22306016	22306126	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22306127	22306503	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22306504	22306614	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22306615	22306700	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22306701	22306789	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22306790	22307200	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=intron:HG00642_ch_T0001543:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22307201	22307499	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00642_ch_T0001543;gene_id=HG00642_ch_G0000501;Parent=HG00642_ch_T0001543;transcript_name=HG00642_ch_T0001543;gene_name=RBMY1HP;ID=exon:HG00642_ch_T0001543:9;Name=RBMY1HP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22313830	22316001	.	-	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;gene_id=HG00642_ch_G0000502;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00642_ch_G0000502;Name=ENSG00000242393
HG00642_chrY	CAT	transcript	22313830	22316001	1000	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_G0000502;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=HG00642_ch_T0001544;Name=ENSG00000242393
HG00642_chrY	CAT	exon	22313830	22313877	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001544:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22313878	22313994	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001544:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22313995	22314140	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001544:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22314141	22314226	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001544:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22314227	22314290	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001544:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22314291	22314553	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001544:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22314554	22314619	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001544:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22314620	22315608	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001544:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22315609	22316001	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG00642_ch_T0001544;gene_id=HG00642_ch_G0000502;Parent=HG00642_ch_T0001544;transcript_name=HG00642_ch_T0001544;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001544:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22316869	22331317	.	+	.	source_gene_common_name=RBMY1B;source_gene=ENSG00000242875.7;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;gene_id=HG00642_ch_G0000503;gene_biotype=protein_coding;gene_name=RBMY1B;gene_sources=liftoff;ID=HG00642_ch_G0000503;Name=RBMY1B
HG00642_chrY	CAT	transcript	22316869	22331317	100	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_G0000503;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=HG00642_ch_T0001545;Name=RBMY1B
HG00642_chrY	CAT	exon	22316869	22317016	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22317017	22318877	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22318878	22318990	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22318882	22318990	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22318882	22318884	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=start_codon:HG00642_ch_T0001545;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22318991	22319464	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22319465	22319568	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22319465	22319568	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22319569	22322587	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22322588	22322765	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22322588	22322765	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22322766	22324680	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22324681	22324833	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22324681	22324833	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22324834	22326843	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22326844	22326958	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22326844	22326958	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22326959	22327913	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22327914	22328024	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22327914	22328024	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22328025	22328465	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22328466	22328576	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22328466	22328576	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22328577	22329010	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22329011	22329121	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22329011	22329121	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22329122	22330042	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330043	22330153	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22330043	22330153	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22330154	22330240	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330241	22330329	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22330241	22330329	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22330330	22330740	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001545:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330741	22331317	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001545:11;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22330741	22331039	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001545:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22331037	22331039	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG00642_ch_T0001545;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001545;transcript_name=HG00642_ch_T0001545;gene_name=RBMY1B;ID=stop_codon:HG00642_ch_T0001545;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22316894	22331317	1000	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_G0000503;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=HG00642_ch_T0001546;Name=RBMY1B
HG00642_chrY	CAT	exon	22316894	22317016	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22317017	22318877	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22318878	22318990	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22318882	22318990	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001546:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22318882	22318884	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=start_codon:HG00642_ch_T0001546;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22318991	22319464	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22319465	22319568	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22319465	22319568	.	+	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001546:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22319569	22324680	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22324681	22324833	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22324681	22324713	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=CDS:HG00642_ch_T0001546:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22324711	22324713	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=stop_codon:HG00642_ch_T0001546;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22324834	22326843	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22326844	22326958	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22326959	22327913	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22327914	22328024	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22328025	22328465	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22328466	22328576	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22328577	22329010	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22329011	22329121	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22329122	22330042	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330043	22330153	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22330154	22330240	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330241	22330329	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22330330	22330740	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=intron:HG00642_ch_T0001546:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22330741	22331317	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG00642_ch_T0001546;gene_id=HG00642_ch_G0000503;Parent=HG00642_ch_T0001546;transcript_name=HG00642_ch_T0001546;gene_name=RBMY1B;ID=exon:HG00642_ch_T0001546:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22337370	22339541	.	-	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;gene_id=HG00642_ch_G0000504;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=HG00642_ch_G0000504;Name=ENSG00000228257
HG00642_chrY	CAT	transcript	22337370	22339541	1000	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_G0000504;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=HG00642_ch_T0001547;Name=ENSG00000228257
HG00642_chrY	CAT	exon	22337370	22337417	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=exon:HG00642_ch_T0001547:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22337418	22337534	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=intron:HG00642_ch_T0001547:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22337535	22337680	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=exon:HG00642_ch_T0001547:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22337681	22337766	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=intron:HG00642_ch_T0001547:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22337767	22337830	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=exon:HG00642_ch_T0001547:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22337831	22338093	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=intron:HG00642_ch_T0001547:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22338094	22338159	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=exon:HG00642_ch_T0001547:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22338160	22339144	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=intron:HG00642_ch_T0001547:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22339145	22339541	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG00642_ch_T0001547;gene_id=HG00642_ch_G0000504;Parent=HG00642_ch_T0001547;transcript_name=HG00642_ch_T0001547;gene_name=ENSG00000228257;ID=exon:HG00642_ch_T0001547:4;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22340409	22354855	.	+	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;gene_id=HG00642_ch_G0000505;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG00642_ch_G0000505;Name=RBMY1A1
HG00642_chrY	CAT	transcript	22340409	22354855	100	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_G0000505;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=HG00642_ch_T0001548;Name=RBMY1A1
HG00642_chrY	CAT	exon	22340409	22340556	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22340557	22342417	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22342418	22342530	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22342422	22342530	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22342422	22342424	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=start_codon:HG00642_ch_T0001548;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22342531	22343002	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22343003	22343106	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22343003	22343106	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22343107	22346125	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22346126	22346303	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22346126	22346303	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22346304	22348218	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22348219	22348371	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22348219	22348371	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22348372	22350381	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22350382	22350496	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22350382	22350496	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22350497	22351451	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22351452	22351562	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22351452	22351562	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22351563	22352003	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22352004	22352114	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22352004	22352114	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22352115	22352548	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22352549	22352659	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22352549	22352659	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22352660	22353580	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22353581	22353691	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22353581	22353691	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22353692	22353778	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22353779	22353867	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22353779	22353867	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22353868	22354278	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001548:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22354279	22354855	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001548:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22354279	22354577	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001548:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22354575	22354577	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG00642_ch_T0001548;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001548;transcript_name=HG00642_ch_T0001548;gene_name=RBMY1A1;ID=stop_codon:HG00642_ch_T0001548;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22340434	22354855	1000	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_G0000505;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=HG00642_ch_T0001549;Name=RBMY1A1
HG00642_chrY	CAT	exon	22340434	22340556	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22340557	22342417	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22342418	22342530	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22342422	22342530	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001549:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22342422	22342424	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=start_codon:HG00642_ch_T0001549;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22342531	22343002	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22343003	22343106	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22343003	22343106	.	+	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001549:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22343107	22348218	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22348219	22348371	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22348219	22348251	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001549:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22348249	22348251	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=stop_codon:HG00642_ch_T0001549;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22348372	22350381	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22350382	22350496	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22350497	22351451	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22351452	22351562	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22351563	22352003	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22352004	22352114	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22352115	22352548	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22352549	22352659	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22352660	22353580	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22353581	22353691	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22353692	22353778	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22353779	22353867	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22353868	22354278	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001549:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22354279	22354855	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG00642_ch_T0001549;gene_id=HG00642_ch_G0000505;Parent=HG00642_ch_T0001549;transcript_name=HG00642_ch_T0001549;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001549:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22360914	22363079	.	-	.	source_gene_common_name=ENSG00000251618;source_gene=ENSG00000251618.1;gene_id=HG00642_ch_G0000506;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000251618;gene_sources=liftoff;ID=HG00642_ch_G0000506;Name=ENSG00000251618
HG00642_chrY	CAT	transcript	22360914	22363079	1000	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_G0000506;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=HG00642_ch_T0001550;Name=ENSG00000251618
HG00642_chrY	CAT	exon	22360914	22360955	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=exon:HG00642_ch_T0001550:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22360956	22361072	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=intron:HG00642_ch_T0001550:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22361073	22361204	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=exon:HG00642_ch_T0001550:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22361205	22361289	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=intron:HG00642_ch_T0001550:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22361290	22361368	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=exon:HG00642_ch_T0001550:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22361369	22361612	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=intron:HG00642_ch_T0001550:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22361613	22361697	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=exon:HG00642_ch_T0001550:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22361698	22362694	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=intron:HG00642_ch_T0001550:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22362695	22363079	.	-	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00642_ch_T0001550;gene_id=HG00642_ch_G0000506;Parent=HG00642_ch_T0001550;transcript_name=HG00642_ch_T0001550;gene_name=ENSG00000251618;ID=exon:HG00642_ch_T0001550:4;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22363947	22378395	.	+	.	source_gene_common_name=RBMY1D;source_gene=ENSG00000244395.6;gene_id=HG00642_ch_G0000507;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff;ID=HG00642_ch_G0000507;Name=RBMY1D
HG00642_chrY	CAT	transcript	22363947	22378395	100	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_G0000507;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=HG00642_ch_T0001551;Name=RBMY1D
HG00642_chrY	CAT	exon	22363947	22364094	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22364095	22365955	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22365956	22366068	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22365960	22366068	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22365960	22365962	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=start_codon:HG00642_ch_T0001551;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366069	22366542	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22366543	22366646	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22366543	22366646	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366647	22369665	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22369666	22369843	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22369666	22369843	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22369844	22371758	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22371759	22371911	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22371759	22371911	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22371912	22373921	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22373922	22374036	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22373922	22374036	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22374037	22374991	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22374992	22375102	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22374992	22375102	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375103	22375543	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22375544	22375654	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22375544	22375654	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375655	22376088	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22376089	22376199	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22376089	22376199	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22376200	22377120	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377121	22377231	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22377121	22377231	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22377232	22377318	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377319	22377407	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22377319	22377407	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22377408	22377818	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001551:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377819	22378395	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001551:11;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22377819	22378117	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001551:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22378115	22378117	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001551;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001551;transcript_name=HG00642_ch_T0001551;gene_name=RBMY1D;ID=stop_codon:HG00642_ch_T0001551;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22363972	22378395	1000	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_G0000507;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=HG00642_ch_T0001552;Name=RBMY1D
HG00642_chrY	CAT	exon	22363972	22364094	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22364095	22365955	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22365956	22366068	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22365960	22366068	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22365960	22365962	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=start_codon:HG00642_ch_T0001552;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366069	22366542	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22366543	22366646	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22366543	22366646	.	+	2	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366647	22371758	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22371759	22371911	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22371759	22371791	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22371789	22371791	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=stop_codon:HG00642_ch_T0001552;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22371912	22373921	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22373922	22374036	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22374037	22374991	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22374992	22375102	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375103	22375543	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22375544	22375654	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375655	22376088	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22376089	22376199	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22376200	22377120	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377121	22377231	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22377232	22377318	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377319	22377407	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22377408	22377818	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001552:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377819	22378395	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001552;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001552;transcript_name=HG00642_ch_T0001552;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001552:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22364034	22378163	100	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_G0000507;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=HG00642_ch_T0001553;Name=RBMY1D
HG00642_chrY	CAT	exon	22364034	22364094	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22364095	22365955	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22365956	22366068	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22365960	22366068	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22365960	22365962	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=start_codon:HG00642_ch_T0001553;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366069	22366542	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22366543	22366646	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22366543	22366646	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22366647	22369665	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22369666	22369843	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22369666	22369843	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22369844	22371758	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22371759	22371911	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22371759	22371911	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22371912	22373921	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22373922	22374036	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22373922	22374036	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22374037	22374991	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22374992	22375102	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22374992	22375102	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375103	22375543	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22375544	22375654	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22375544	22375654	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22375655	22376088	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22376089	22376199	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22376089	22376199	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22376200	22377318	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377319	22377407	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22377319	22377407	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22377408	22377818	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=intron:HG00642_ch_T0001553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22377819	22378163	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=exon:HG00642_ch_T0001553:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22377819	22378117	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=CDS:HG00642_ch_T0001553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22378115	22378117	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG00642_ch_T0001553;gene_id=HG00642_ch_G0000507;Parent=HG00642_ch_T0001553;transcript_name=HG00642_ch_T0001553;gene_name=RBMY1D;ID=stop_codon:HG00642_ch_T0001553;Name=RBMY1D;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22384921	22387140	.	-	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;gene_id=HG00642_ch_G0000508;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG00642_ch_G0000508;Name=ENSG00000229725
HG00642_chrY	CAT	transcript	22384921	22387140	1000	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_G0000508;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=HG00642_ch_T0001554;Name=ENSG00000229725
HG00642_chrY	CAT	exon	22384921	22384970	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_T0001554;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001554:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22384971	22385341	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_T0001554;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=intron:HG00642_ch_T0001554:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22385342	22385509	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_T0001554;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001554:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22385510	22386753	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_T0001554;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=intron:HG00642_ch_T0001554:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22386754	22387140	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=299.835;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG00642_ch_T0001554;gene_id=HG00642_ch_G0000508;Parent=HG00642_ch_T0001554;transcript_name=HG00642_ch_T0001554;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001554:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22394157	22434152	.	-	.	source_gene_common_name=TTTY13;source_gene=ENSG00000184991.3;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;gene_id=HG00642_ch_G0000509;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG00642_ch_G0000509;Name=TTTY13
HG00642_chrY	CAT	transcript	22394157	22434152	1000	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_G0000509;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=HG00642_ch_T0001555;Name=TTTY13
HG00642_chrY	CAT	exon	22394157	22395254	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:0;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22395255	22395398	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:0;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22395399	22395473	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:1;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22395474	22400062	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:1;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22400063	22400221	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:2;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22400222	22412585	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:2;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22412586	22412727	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:3;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22412728	22413847	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:3;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22413848	22413939	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:4;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22413940	22416565	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:4;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22416566	22416727	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:5;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22416728	22433938	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=intron:HG00642_ch_T0001555:5;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22433939	22434152	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=299.949;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG00642_ch_T0001555;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001555;transcript_name=HG00642_ch_T0001555;gene_name=TTTY13;ID=exon:HG00642_ch_T0001555:6;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22412665	22423731	1000	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_G0000509;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=HG00642_ch_T0001556;Name=TTTY13
HG00642_chrY	CAT	exon	22412665	22412727	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:0;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22412728	22413847	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=intron:HG00642_ch_T0001556:0;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22413848	22413939	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:1;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22413940	22416565	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=intron:HG00642_ch_T0001556:1;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22416566	22416727	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:2;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22416728	22418336	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=intron:HG00642_ch_T0001556:2;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22418337	22418435	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:3;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22418436	22419030	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=intron:HG00642_ch_T0001556:3;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22419031	22419192	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:4;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22419193	22423650	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=intron:HG00642_ch_T0001556:4;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22423651	22423731	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG00642_ch_T0001556;gene_id=HG00642_ch_G0000509;Parent=HG00642_ch_T0001556;transcript_name=HG00642_ch_T0001556;gene_name=TTTY13;ID=exon:HG00642_ch_T0001556:5;Name=TTTY13;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22460754	22461086	.	-	.	source_gene_common_name=ELOCP5;source_gene=ENSG00000271123.1;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;gene_id=HG00642_ch_G0000510;gene_biotype=processed_pseudogene;gene_name=ELOCP5;gene_sources=liftoff;ID=HG00642_ch_G0000510;Name=ELOCP5
HG00642_chrY	CAT	transcript	22460754	22461086	1000	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=HG00642_ch_T0001557;gene_id=HG00642_ch_G0000510;Parent=HG00642_ch_G0000510;transcript_name=HG00642_ch_T0001557;gene_name=ELOCP5;ID=HG00642_ch_T0001557;Name=ELOCP5
HG00642_chrY	CAT	exon	22460754	22461086	.	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=HG00642_ch_T0001557;gene_id=HG00642_ch_G0000510;Parent=HG00642_ch_T0001557;transcript_name=HG00642_ch_T0001557;gene_name=ELOCP5;ID=exon:HG00642_ch_T0001557:0;Name=ELOCP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22466546	22468112	.	-	.	source_gene_common_name=CDY10P;source_gene=ENSG00000226042.1;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;gene_id=HG00642_ch_G0000511;gene_biotype=unprocessed_pseudogene;gene_name=CDY10P;gene_sources=liftoff;ID=HG00642_ch_G0000511;Name=CDY10P
HG00642_chrY	CAT	transcript	22466546	22468112	1000	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=HG00642_ch_T0001558;gene_id=HG00642_ch_G0000511;Parent=HG00642_ch_G0000511;transcript_name=HG00642_ch_T0001558;gene_name=CDY10P;ID=HG00642_ch_T0001558;Name=CDY10P
HG00642_chrY	CAT	exon	22466546	22468112	.	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=HG00642_ch_T0001558;gene_id=HG00642_ch_G0000511;Parent=HG00642_ch_T0001558;transcript_name=HG00642_ch_T0001558;gene_name=CDY10P;ID=exon:HG00642_ch_T0001558:0;Name=CDY10P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22490996	22503399	.	+	.	source_gene_common_name=USP9YP3;source_gene=ENSG00000237023.1;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;gene_id=HG00642_ch_G0000512;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP3;gene_sources=liftoff;ID=HG00642_ch_G0000512;Name=USP9YP3
HG00642_chrY	CAT	transcript	22490996	22503399	1000	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_G0000512;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=HG00642_ch_T0001559;Name=USP9YP3
HG00642_chrY	CAT	exon	22490996	22491212	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:0;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22491213	22493833	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=intron:HG00642_ch_T0001559:0;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22493834	22494048	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:1;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22494049	22496169	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=intron:HG00642_ch_T0001559:1;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22496170	22496347	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:2;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22496348	22499154	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=intron:HG00642_ch_T0001559:2;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22499155	22499281	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:3;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22499282	22501960	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=intron:HG00642_ch_T0001559:3;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22501961	22502864	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:4;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22502865	22503274	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=intron:HG00642_ch_T0001559:4;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22503275	22503399	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG00642_ch_T0001559;gene_id=HG00642_ch_G0000512;Parent=HG00642_ch_T0001559;transcript_name=HG00642_ch_T0001559;gene_name=USP9YP3;ID=exon:HG00642_ch_T0001559:5;Name=USP9YP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22506637	22510509	.	-	.	source_gene_common_name=USP9YP8;source_gene=ENSG00000229416.1;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;gene_id=HG00642_ch_G0000513;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP8;gene_sources=liftoff;ID=HG00642_ch_G0000513;Name=USP9YP8
HG00642_chrY	CAT	transcript	22506637	22510509	1000	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_G0000513;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=HG00642_ch_T0001560;Name=USP9YP8
HG00642_chrY	CAT	exon	22506637	22506826	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_T0001560;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=exon:HG00642_ch_T0001560:0;Name=USP9YP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22506827	22508390	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_T0001560;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=intron:HG00642_ch_T0001560:0;Name=USP9YP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22508391	22508614	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_T0001560;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=exon:HG00642_ch_T0001560:1;Name=USP9YP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22508615	22510423	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_T0001560;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=intron:HG00642_ch_T0001560:1;Name=USP9YP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22510424	22510509	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG00642_ch_T0001560;gene_id=HG00642_ch_G0000513;Parent=HG00642_ch_T0001560;transcript_name=HG00642_ch_T0001560;gene_name=USP9YP8;ID=exon:HG00642_ch_T0001560:2;Name=USP9YP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22525965	22527615	.	+	.	source_gene_common_name=CDY11P;source_gene=ENSG00000230029.1;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;gene_id=HG00642_ch_G0000514;gene_biotype=unprocessed_pseudogene;gene_name=CDY11P;gene_sources=liftoff;ID=HG00642_ch_G0000514;Name=CDY11P
HG00642_chrY	CAT	transcript	22525965	22527615	1000	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=HG00642_ch_T0001561;gene_id=HG00642_ch_G0000514;Parent=HG00642_ch_G0000514;transcript_name=HG00642_ch_T0001561;gene_name=CDY11P;ID=HG00642_ch_T0001561;Name=CDY11P
HG00642_chrY	CAT	exon	22525965	22527615	.	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=HG00642_ch_T0001561;gene_id=HG00642_ch_G0000514;Parent=HG00642_ch_T0001561;transcript_name=HG00642_ch_T0001561;gene_name=CDY11P;ID=exon:HG00642_ch_T0001561:0;Name=CDY11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22606991	22607630	.	-	.	source_gene_common_name=OFD1P16Y;source_gene=ENSG00000277519.1;alternative_source_transcripts=ENST00000620993.1;gene_id=HG00642_ch_G0000515;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P16Y;gene_sources=liftoff;ID=HG00642_ch_G0000515;Name=OFD1P16Y
HG00642_chrY	CAT	transcript	22606991	22607630	1000	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00642_ch_T0001562;gene_id=HG00642_ch_G0000515;Parent=HG00642_ch_G0000515;transcript_name=HG00642_ch_T0001562;gene_name=OFD1P16Y;ID=HG00642_ch_T0001562;Name=OFD1P16Y
HG00642_chrY	CAT	exon	22606991	22607167	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00642_ch_T0001562;gene_id=HG00642_ch_G0000515;Parent=HG00642_ch_T0001562;transcript_name=HG00642_ch_T0001562;gene_name=OFD1P16Y;ID=exon:HG00642_ch_T0001562:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22607168	22607489	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00642_ch_T0001562;gene_id=HG00642_ch_G0000515;Parent=HG00642_ch_T0001562;transcript_name=HG00642_ch_T0001562;gene_name=OFD1P16Y;ID=intron:HG00642_ch_T0001562:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22607490	22607630	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00642_ch_T0001562;gene_id=HG00642_ch_G0000515;Parent=HG00642_ch_T0001562;transcript_name=HG00642_ch_T0001562;gene_name=OFD1P16Y;ID=exon:HG00642_ch_T0001562:1;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22614674	22636135	.	+	.	source_gene_common_name=ENSG00000286187;source_gene=ENSG00000286187.2;alternative_source_transcripts=ENST00000807569.1;gene_id=HG00642_ch_G0000516;gene_biotype=lncRNA;gene_name=ENSG00000286187;gene_sources=liftoff;ID=HG00642_ch_G0000516;Name=ENSG00000286187
HG00642_chrY	CAT	transcript	22614674	22628585	1000	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_G0000516;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=HG00642_ch_T0001563;Name=ENSG00000286187
HG00642_chrY	CAT	exon	22614674	22614992	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001563;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001563:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22614993	22628093	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001563;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001563:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628094	22628253	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001563;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001563:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22628254	22628413	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001563;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001563:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628414	22628585	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00642_ch_T0001563;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001563;transcript_name=HG00642_ch_T0001563;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001563:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22614705	22636135	1000	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_G0000516;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=HG00642_ch_T0001564;Name=ENSG00000286187
HG00642_chrY	CAT	exon	22614705	22614992	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22614993	22626615	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22626616	22626921	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22626922	22628093	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628094	22628253	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22628254	22628413	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628414	22630579	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22630580	22630762	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22630763	22630924	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22630925	22631577	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22631578	22632942	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22632943	22633229	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001564:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22633230	22636135	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00642_ch_T0001564;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001564;transcript_name=HG00642_ch_T0001564;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001564:6;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22626469	22628579	1000	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_G0000516;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=HG00642_ch_T0001565;Name=ENSG00000286187
HG00642_chrY	CAT	exon	22626469	22626921	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001565;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001565:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22626922	22628093	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001565;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001565:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628094	22628253	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001565;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001565:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22628254	22628413	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001565;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=intron:HG00642_ch_T0001565:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22628414	22628579	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00642_ch_T0001565;gene_id=HG00642_ch_G0000516;Parent=HG00642_ch_T0001565;transcript_name=HG00642_ch_T0001565;gene_name=ENSG00000286187;ID=exon:HG00642_ch_T0001565:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22660751	22662970	.	+	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1;gene_id=HG00642_ch_G0000517;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG00642_ch_G0000517;Name=ENSG00000229725
HG00642_chrY	CAT	transcript	22660751	22662970	1000	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_G0000517;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=HG00642_ch_T0001566;Name=ENSG00000229725
HG00642_chrY	CAT	exon	22660751	22661137	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_T0001566;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001566:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22661138	22662381	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_T0001566;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=intron:HG00642_ch_T0001566:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22662382	22662549	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_T0001566;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001566:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22662550	22662920	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_T0001566;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=intron:HG00642_ch_T0001566:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22662921	22662970	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00642_ch_T0001566;gene_id=HG00642_ch_G0000517;Parent=HG00642_ch_T0001566;transcript_name=HG00642_ch_T0001566;gene_name=ENSG00000229725;ID=exon:HG00642_ch_T0001566:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22669497	22683946	.	-	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;alternative_source_transcripts=ENST00000382680.5;gene_id=HG00642_ch_G0000518;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG00642_ch_G0000518;Name=RBMY1A1
HG00642_chrY	CAT	transcript	22669497	22683946	100	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_G0000518;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=HG00642_ch_T0001567;Name=RBMY1A1
HG00642_chrY	CAT	exon	22669497	22670073	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22669775	22670073	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22669775	22669777	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=stop_codon:HG00642_ch_T0001567;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670074	22670484	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22670485	22670573	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22670485	22670573	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670574	22670659	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22670660	22670770	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22670660	22670770	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670771	22671691	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22671692	22671802	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22671692	22671802	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22671803	22672236	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22672237	22672347	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22672237	22672347	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22672348	22672788	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22672789	22672899	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22672789	22672899	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22672900	22673854	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22673855	22673969	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22673855	22673969	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22673970	22675979	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22675980	22676132	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22675980	22676132	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22676133	22678047	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22678048	22678225	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22678048	22678225	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22678226	22681244	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22681245	22681348	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22681245	22681348	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22681349	22681824	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22681825	22681937	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22681825	22681933	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22681931	22681933	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=start_codon:HG00642_ch_T0001567;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22681938	22683798	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001567:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22683799	22683946	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00642_ch_T0001567;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001567;transcript_name=HG00642_ch_T0001567;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001567:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22669497	22683921	1000	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_G0000518;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=HG00642_ch_T0001568;Name=RBMY1A1
HG00642_chrY	CAT	exon	22669497	22670073	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670074	22670484	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22670485	22670573	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670574	22670659	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22670660	22670770	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22670771	22671691	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22671692	22671802	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22671803	22672236	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22672237	22672347	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22672348	22672788	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22672789	22672899	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22672900	22673854	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22673855	22673969	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22673970	22675979	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22675980	22676132	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22676100	22676132	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001568:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22676100	22676102	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=stop_codon:HG00642_ch_T0001568;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22676133	22681244	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22681245	22681348	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22681245	22681348	.	-	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001568:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22681349	22681824	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22681825	22681937	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22681825	22681933	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=CDS:HG00642_ch_T0001568:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22681931	22681933	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=start_codon:HG00642_ch_T0001568;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22681938	22683798	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=intron:HG00642_ch_T0001568:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22683799	22683921	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00642_ch_T0001568;gene_id=HG00642_ch_G0000518;Parent=HG00642_ch_T0001568;transcript_name=HG00642_ch_T0001568;gene_name=RBMY1A1;ID=exon:HG00642_ch_T0001568:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22684814	22686985	.	+	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;gene_id=HG00642_ch_G0000519;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00642_ch_G0000519;Name=ENSG00000242393
HG00642_chrY	CAT	transcript	22684814	22686985	1000	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_G0000519;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=HG00642_ch_T0001569;Name=ENSG00000242393
HG00642_chrY	CAT	exon	22684814	22685206	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001569:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22685207	22686195	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001569:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22686196	22686261	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001569:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22686262	22686524	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001569:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22686525	22686588	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001569:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22686589	22686674	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001569:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22686675	22686820	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001569:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22686821	22686937	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=intron:HG00642_ch_T0001569:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22686938	22686985	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00642_ch_T0001569;gene_id=HG00642_ch_G0000519;Parent=HG00642_ch_T0001569;transcript_name=HG00642_ch_T0001569;gene_name=ENSG00000242393;ID=exon:HG00642_ch_T0001569:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22693038	22707462	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000358944.8;gene_id=HG00642_ch_G0000520;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=HG00642_ch_G0000520;Name=RBMY1E
HG00642_chrY	CAT	transcript	22693038	22707462	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_G0000520;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=HG00642_ch_T0001570;Name=RBMY1E
HG00642_chrY	CAT	exon	22693038	22693614	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22693615	22694025	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22694026	22694114	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22694115	22694200	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22694201	22694311	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22694312	22695232	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695233	22695343	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695344	22695777	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695778	22695888	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695889	22696329	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22696330	22696440	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22696441	22697395	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22697396	22697510	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22697511	22699520	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22699521	22699673	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22699641	22699673	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22699641	22699643	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=stop_codon:HG00642_ch_T0001570;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22699674	22704785	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22704786	22704889	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22704786	22704889	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22704890	22705365	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22705366	22705478	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22705366	22705474	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22705472	22705474	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=start_codon:HG00642_ch_T0001570;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22705479	22707339	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001570:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22707340	22707462	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00642_ch_T0001570;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001570;transcript_name=HG00642_ch_T0001570;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001570:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22693040	22707452	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_G0000520;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=HG00642_ch_T0001571;Name=RBMY1E
HG00642_chrY	CAT	exon	22693040	22693614	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22693316	22693614	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22693316	22693318	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=stop_codon:HG00642_ch_T0001571;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22693615	22694025	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22694026	22694114	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22694026	22694114	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22694115	22695232	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695233	22695343	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22695233	22695343	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695344	22695777	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695778	22695888	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22695778	22695888	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695889	22696329	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22696330	22696440	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22696330	22696440	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22696441	22697395	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22697396	22697510	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22697396	22697510	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22697511	22699520	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22699521	22699673	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22699521	22699673	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22699674	22701588	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22701589	22701766	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22701589	22701766	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22701767	22704785	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22704786	22704889	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22704786	22704889	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22704890	22705365	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22705366	22705478	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22705366	22705474	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001571:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22705472	22705474	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=start_codon:HG00642_ch_T0001571;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22705479	22707339	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001571:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22707340	22707452	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG00642_ch_T0001571;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001571;transcript_name=HG00642_ch_T0001571;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001571:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22693042	22707452	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_G0000520;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=HG00642_ch_T0001572;Name=RBMY1E
HG00642_chrY	CAT	exon	22693042	22693614	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22693316	22693614	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22693316	22693318	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=stop_codon:HG00642_ch_T0001572;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22693615	22694025	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22694026	22694114	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22694026	22694114	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22694115	22694200	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22694201	22694311	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22694201	22694311	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22694312	22695232	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695233	22695343	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22695233	22695343	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695344	22695777	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22695778	22695888	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22695778	22695888	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22695889	22696329	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22696330	22696440	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22696330	22696440	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22696441	22697395	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22697396	22697510	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22697396	22697510	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22697511	22699520	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22699521	22699673	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22699521	22699673	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22699674	22701588	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22701589	22701766	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22701589	22701766	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22701767	22704785	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22704786	22704889	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22704786	22704889	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22704890	22705365	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22705366	22705478	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22705366	22705474	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=CDS:HG00642_ch_T0001572:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22705472	22705474	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=start_codon:HG00642_ch_T0001572;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22705479	22707339	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=intron:HG00642_ch_T0001572:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22707340	22707452	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG00642_ch_T0001572;gene_id=HG00642_ch_G0000520;Parent=HG00642_ch_T0001572;transcript_name=HG00642_ch_T0001572;gene_name=RBMY1E;ID=exon:HG00642_ch_T0001572:11;Name=RBMY1E;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22708355	22710526	.	+	.	source_gene_common_name=ENSG00000227444;source_gene=ENSG00000227444.1;gene_id=HG00642_ch_G0000521;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000227444;gene_sources=liftoff,transMap;ID=HG00642_ch_G0000521;Name=ENSG00000227444
HG00642_chrY	CAT	transcript	22708355	22710526	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_G0000521;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=HG00642_ch_T0001573;Name=ENSG00000227444
HG00642_chrY	CAT	exon	22708355	22708748	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001573:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22708749	22709736	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001573:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22709737	22709821	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001573:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22709822	22710065	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001573:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22710066	22710361	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001573:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22710362	22710478	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001573:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22710479	22710526	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001573;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001573;transcript_name=HG00642_ch_T0001573;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001573:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22708355	22710526	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_G0000521;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=HG00642_ch_T0001574;Name=ENSG00000227444
HG00642_chrY	CAT	exon	22708355	22708748	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001574:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22708749	22709736	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001574:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22709737	22709821	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001574:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22709822	22710065	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001574:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22710066	22710144	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001574:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22710145	22710217	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001574:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22710218	22710361	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001574:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22710362	22710478	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=intron:HG00642_ch_T0001574:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22710479	22710526	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00642_ch_T0001574;gene_id=HG00642_ch_G0000521;Parent=HG00642_ch_T0001574;transcript_name=HG00642_ch_T0001574;gene_name=ENSG00000227444;ID=exon:HG00642_ch_T0001574:4;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22716941	22726570	.	-	.	source_gene_common_name=RBMY2AP;source_gene=ENSG00000226092.4;gene_id=HG00642_ch_G0000522;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2AP;gene_sources=liftoff;ID=HG00642_ch_G0000522;Name=RBMY2AP
HG00642_chrY	CAT	transcript	22716941	22726570	1000	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_G0000522;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=HG00642_ch_T0001575;Name=RBMY2AP
HG00642_chrY	CAT	exon	22716941	22717239	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22717240	22717660	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22717661	22717748	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22717749	22717830	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22717831	22717941	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22717942	22718810	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22718811	22718925	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22718926	22720932	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22720933	22721085	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22721086	22723020	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22723021	22723198	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22723199	22725904	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22725905	22726008	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22726009	22726461	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=intron:HG00642_ch_T0001575:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22726462	22726570	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00642_ch_T0001575;gene_id=HG00642_ch_G0000522;Parent=HG00642_ch_T0001575;transcript_name=HG00642_ch_T0001575;gene_name=RBMY2AP;ID=exon:HG00642_ch_T0001575:7;Name=RBMY2AP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22718728	22728572	.	-	.	source_gene_common_name=ENSG00000295847;source_gene=ENSG00000295847.1;gene_id=HG00642_ch_G0000523;gene_biotype=lncRNA;gene_name=ENSG00000295847;gene_sources=liftoff;ID=HG00642_ch_G0000523;Name=ENSG00000295847
HG00642_chrY	CAT	transcript	22718728	22728572	1000	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_G0000523;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=HG00642_ch_T0001576;Name=ENSG00000295847
HG00642_chrY	CAT	exon	22718728	22718925	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22718926	22720932	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22720933	22721085	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22721086	22723020	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22723021	22723198	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22723199	22725904	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22725905	22726008	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22726009	22726461	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22726462	22726574	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22726575	22727588	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22727589	22727668	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22727669	22728422	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001576:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22728423	22728572	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001576;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001576;transcript_name=HG00642_ch_T0001576;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001576:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22720097	22728541	1000	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_G0000523;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=HG00642_ch_T0001577;Name=ENSG00000295847
HG00642_chrY	CAT	exon	22720097	22720354	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22720355	22720932	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22720933	22721085	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22721086	22723020	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22723021	22723198	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22723199	22725904	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22725905	22726008	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22726009	22726461	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22726462	22726574	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22726575	22727588	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22727589	22727668	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22727669	22728422	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=intron:HG00642_ch_T0001577:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22728423	22728541	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00642_ch_T0001577;gene_id=HG00642_ch_G0000523;Parent=HG00642_ch_T0001577;transcript_name=HG00642_ch_T0001577;gene_name=ENSG00000295847;ID=exon:HG00642_ch_T0001577:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22729432	22731013	.	+	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;alternative_source_transcripts=ENST00000426526.1;gene_id=HG00642_ch_G0000524;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=HG00642_ch_G0000524;Name=ENSG00000237968
HG00642_chrY	CAT	transcript	22729432	22731013	1000	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_G0000524;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=HG00642_ch_T0001578;Name=ENSG00000237968
HG00642_chrY	CAT	exon	22729432	22729763	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=exon:HG00642_ch_T0001578:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22729764	22730242	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=intron:HG00642_ch_T0001578:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22730243	22730281	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=exon:HG00642_ch_T0001578:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22730282	22730479	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=intron:HG00642_ch_T0001578:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22730480	22730589	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=exon:HG00642_ch_T0001578:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22730590	22730676	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=intron:HG00642_ch_T0001578:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22730677	22730820	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=exon:HG00642_ch_T0001578:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22730821	22730937	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=intron:HG00642_ch_T0001578:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22730938	22731013	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00642_ch_T0001578;gene_id=HG00642_ch_G0000524;Parent=HG00642_ch_T0001578;transcript_name=HG00642_ch_T0001578;gene_name=ENSG00000237968;ID=exon:HG00642_ch_T0001578:4;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22734787	22740233	.	-	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=HG00642_ch_G0000525;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG00642_ch_G0000525;Name=ENSG00000305658
HG00642_chrY	CAT	transcript	22734787	22740233	1000	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_G0000525;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=HG00642_ch_T0001579;Name=ENSG00000305658
HG00642_chrY	CAT	exon	22734787	22735491	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001579:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22735492	22735855	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001579:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22735856	22735982	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001579:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22735983	22737851	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001579:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22737852	22737985	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001579:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22737986	22739894	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001579:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22739895	22740233	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001579;gene_id=HG00642_ch_G0000525;Parent=HG00642_ch_T0001579;transcript_name=HG00642_ch_T0001579;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001579:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22761731	22794769	.	+	.	source_gene_common_name=OFD1P8Y;source_gene=ENSG00000231159.1;alternative_source_transcripts=ENST00000449148.1;gene_id=HG00642_ch_G0000526;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P8Y;gene_sources=liftoff;ID=HG00642_ch_G0000526;Name=OFD1P8Y
HG00642_chrY	CAT	transcript	22761731	22794769	1000	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_G0000526;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=HG00642_ch_T0001580;Name=OFD1P8Y
HG00642_chrY	CAT	exon	22761731	22761837	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22761838	22763349	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22763350	22763477	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22763478	22764013	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22764014	22764123	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22764124	22765840	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22765841	22766456	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22766457	22766829	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22766830	22766940	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22766941	22786282	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22786283	22786383	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22786384	22793015	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22793016	22793167	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22793168	22794363	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22794364	22794429	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22794430	22794727	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=intron:HG00642_ch_T0001580:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22794728	22794769	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00642_ch_T0001580;gene_id=HG00642_ch_G0000526;Parent=HG00642_ch_T0001580;transcript_name=HG00642_ch_T0001580;gene_name=OFD1P8Y;ID=exon:HG00642_ch_T0001580:8;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22790556	22838905	.	-	.	source_gene_common_name=ENSG00000310035;source_gene=ENSG00000310035.1;gene_id=HG00642_ch_G0000527;gene_biotype=lncRNA;gene_name=ENSG00000310035;gene_sources=liftoff;ID=HG00642_ch_G0000527;Name=ENSG00000310035
HG00642_chrY	CAT	transcript	22790556	22838844	1000	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_G0000527;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=HG00642_ch_T0001581;Name=ENSG00000310035
HG00642_chrY	CAT	exon	22790556	22790830	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001581:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22790831	22798376	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001581:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22798377	22798679	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001581:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22798680	22833854	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001581:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22833855	22834016	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001581:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22834017	22838580	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001581:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22838581	22838844	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001581;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001581;transcript_name=HG00642_ch_T0001581;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001581:3;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22798051	22838905	1000	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_G0000527;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=HG00642_ch_T0001582;Name=ENSG00000310035
HG00642_chrY	CAT	exon	22798051	22798679	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001582;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001582:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22798680	22833854	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001582;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001582:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22833855	22834016	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001582;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001582:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22834017	22838580	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001582;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001582:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22838581	22838905	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001582;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001582;transcript_name=HG00642_ch_T0001582;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001582:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22815550	22838891	1000	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001583;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_G0000527;transcript_name=HG00642_ch_T0001583;gene_name=ENSG00000310035;ID=HG00642_ch_T0001583;Name=ENSG00000310035
HG00642_chrY	CAT	exon	22815550	22815917	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001583;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001583;transcript_name=HG00642_ch_T0001583;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001583:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22815918	22838580	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001583;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001583;transcript_name=HG00642_ch_T0001583;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001583:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22838581	22838891	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001583;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001583;transcript_name=HG00642_ch_T0001583;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001583:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22815625	22838829	1000	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_G0000527;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=HG00642_ch_T0001584;Name=ENSG00000310035
HG00642_chrY	CAT	exon	22815625	22815917	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001584;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001584:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22815918	22833858	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001584;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001584:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22833859	22834016	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001584;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001584:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22834017	22838580	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001584;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=intron:HG00642_ch_T0001584:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22838581	22838829	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00642_ch_T0001584;gene_id=HG00642_ch_G0000527;Parent=HG00642_ch_T0001584;transcript_name=HG00642_ch_T0001584;gene_name=ENSG00000310035;ID=exon:HG00642_ch_T0001584:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22817748	22820916	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00642_ch_G0000528;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00642_ch_G0000528;Name=ENSG00000295422
HG00642_chrY	CAT	transcript	22817748	22820916	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_G0000528;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=HG00642_ch_T0001585;Name=ENSG00000295422
HG00642_chrY	CAT	exon	22817748	22817858	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_T0001585;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001585:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22817859	22817975	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_T0001585;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001585:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22817976	22818036	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_T0001585;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001585:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22818037	22819571	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_T0001585;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001585:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22819572	22820916	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001585;gene_id=HG00642_ch_G0000528;Parent=HG00642_ch_T0001585;transcript_name=HG00642_ch_T0001585;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001585:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22837981	22838774	.	-	.	source_gene_common_name=HSFY5P;source_gene=ENSG00000232475.1;gene_id=HG00642_ch_G0000529;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY5P;gene_sources=liftoff;ID=HG00642_ch_G0000529;Name=HSFY5P
HG00642_chrY	CAT	transcript	22837981	22838774	1000	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00642_ch_T0001586;gene_id=HG00642_ch_G0000529;Parent=HG00642_ch_G0000529;transcript_name=HG00642_ch_T0001586;gene_name=HSFY5P;ID=HG00642_ch_T0001586;Name=HSFY5P
HG00642_chrY	CAT	exon	22837981	22838130	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00642_ch_T0001586;gene_id=HG00642_ch_G0000529;Parent=HG00642_ch_T0001586;transcript_name=HG00642_ch_T0001586;gene_name=HSFY5P;ID=exon:HG00642_ch_T0001586:0;Name=HSFY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22838131	22838615	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00642_ch_T0001586;gene_id=HG00642_ch_G0000529;Parent=HG00642_ch_T0001586;transcript_name=HG00642_ch_T0001586;gene_name=HSFY5P;ID=intron:HG00642_ch_T0001586:0;Name=HSFY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22838616	22838774	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00642_ch_T0001586;gene_id=HG00642_ch_G0000529;Parent=HG00642_ch_T0001586;transcript_name=HG00642_ch_T0001586;gene_name=HSFY5P;ID=exon:HG00642_ch_T0001586:1;Name=HSFY5P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22839182	22847540	.	-	.	source_gene_common_name=USP9YP17;source_gene=ENSG00000229553.1;alternative_source_transcripts=ENST00000444617.1;gene_id=HG00642_ch_G0000530;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP17;gene_sources=liftoff;ID=HG00642_ch_G0000530;Name=USP9YP17
HG00642_chrY	CAT	transcript	22839182	22847540	1000	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_G0000530;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=HG00642_ch_T0001587;Name=USP9YP17
HG00642_chrY	CAT	exon	22839182	22839220	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=exon:HG00642_ch_T0001587:0;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22839221	22840936	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=intron:HG00642_ch_T0001587:0;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22840937	22841065	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=exon:HG00642_ch_T0001587:1;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22841066	22843423	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=intron:HG00642_ch_T0001587:1;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22843424	22843612	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=exon:HG00642_ch_T0001587:2;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22843613	22845398	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=intron:HG00642_ch_T0001587:2;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22845399	22845516	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=exon:HG00642_ch_T0001587:3;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22845517	22847319	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=intron:HG00642_ch_T0001587:3;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22847320	22847540	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00642_ch_T0001587;gene_id=HG00642_ch_G0000530;Parent=HG00642_ch_T0001587;transcript_name=HG00642_ch_T0001587;gene_name=USP9YP17;ID=exon:HG00642_ch_T0001587:4;Name=USP9YP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22854127	22855141	.	+	.	source_gene_common_name=CDY12P;source_gene=ENSG00000228850.1;alternative_source_transcripts=ENST00000440679.1;gene_id=HG00642_ch_G0000531;gene_biotype=unprocessed_pseudogene;gene_name=CDY12P;gene_sources=liftoff;ID=HG00642_ch_G0000531;Name=CDY12P
HG00642_chrY	CAT	transcript	22854127	22855141	1000	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG00642_ch_T0001588;gene_id=HG00642_ch_G0000531;Parent=HG00642_ch_G0000531;transcript_name=HG00642_ch_T0001588;gene_name=CDY12P;ID=HG00642_ch_T0001588;Name=CDY12P
HG00642_chrY	CAT	exon	22854127	22855141	.	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG00642_ch_T0001588;gene_id=HG00642_ch_G0000531;Parent=HG00642_ch_T0001588;transcript_name=HG00642_ch_T0001588;gene_name=CDY12P;ID=exon:HG00642_ch_T0001588:0;Name=CDY12P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22858249	22858580	.	+	.	source_gene_common_name=ELOCP15;source_gene=ENSG00000232029.1;alternative_source_transcripts=ENST00000442090.1;gene_id=HG00642_ch_G0000532;gene_biotype=processed_pseudogene;gene_name=ELOCP15;gene_sources=liftoff;ID=HG00642_ch_G0000532;Name=ELOCP15
HG00642_chrY	CAT	transcript	22858249	22858580	1000	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG00642_ch_T0001589;gene_id=HG00642_ch_G0000532;Parent=HG00642_ch_G0000532;transcript_name=HG00642_ch_T0001589;gene_name=ELOCP15;ID=HG00642_ch_T0001589;Name=ELOCP15
HG00642_chrY	CAT	exon	22858249	22858580	.	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG00642_ch_T0001589;gene_id=HG00642_ch_G0000532;Parent=HG00642_ch_T0001589;transcript_name=HG00642_ch_T0001589;gene_name=ELOCP15;ID=exon:HG00642_ch_T0001589:0;Name=ELOCP15;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22861185	22936892	.	-	.	source_gene_common_name=ENSG00000236951;source_gene=ENSG00000236951.7;alternative_source_transcripts=ENST00000303804.6;gene_id=HG00642_ch_G0000533;gene_biotype=lncRNA;gene_name=ENSG00000236951;gene_sources=liftoff;ID=HG00642_ch_G0000533;Name=ENSG00000236951
HG00642_chrY	CAT	transcript	22861185	22891798	1000	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=HG00642_ch_T0001590;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22861185	22862010	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22862011	22871508	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001590:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22871509	22871624	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22871625	22874199	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001590:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22874200	22874320	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22874321	22885161	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001590:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22885162	22885248	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22885249	22885349	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001590:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22885350	22885438	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22885439	22891533	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001590:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22891534	22891798	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00642_ch_T0001590;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001590;transcript_name=HG00642_ch_T0001590;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001590:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22861185	22891798	1000	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=HG00642_ch_T0001591;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22861185	22862010	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22862011	22863072	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22863073	22863187	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22863188	22871508	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22871509	22871624	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22871625	22874199	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22874200	22874320	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22874321	22885161	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22885162	22885248	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22885249	22885349	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22885350	22885438	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22885439	22891533	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001591:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22891534	22891798	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00642_ch_T0001591;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001591;transcript_name=HG00642_ch_T0001591;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001591:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22890243	22895298	1000	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=HG00642_ch_T0001592;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22890243	22890484	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001592:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22890485	22891533	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001592:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22891534	22891798	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001592:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22891799	22892313	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001592:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22892314	22892431	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001592:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22892432	22895178	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001592:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22895179	22895298	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00642_ch_T0001592;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001592;transcript_name=HG00642_ch_T0001592;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001592:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22890934	22910894	1000	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=HG00642_ch_T0001593;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22890934	22891798	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001593;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001593:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22891799	22892313	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001593;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001593:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22892314	22892435	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001593;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001593:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22892436	22910697	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001593;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001593:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22910698	22910894	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00642_ch_T0001593;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001593;transcript_name=HG00642_ch_T0001593;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001593:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22891121	22936892	1000	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=HG00642_ch_T0001594;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22891121	22891798	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22891799	22892313	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22892314	22892431	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22892432	22892975	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22892976	22893172	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22893173	22893292	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22893293	22893378	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22893379	22895178	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22895179	22895514	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22895515	22896980	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22896981	22897070	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22897071	22910697	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22910698	22911051	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22911052	22911481	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22911482	22911600	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22911601	22918778	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22918779	22918864	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22918865	22919172	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22919173	22919395	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22919396	22929359	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22929360	22929500	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22929501	22936047	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936048	22936357	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22936358	22936691	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001594:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936692	22936892	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00642_ch_T0001594;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001594;transcript_name=HG00642_ch_T0001594;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001594:12;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22908894	22910904	1000	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00642_ch_T0001595;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001595;gene_name=ENSG00000236951;ID=HG00642_ch_T0001595;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22908894	22909103	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00642_ch_T0001595;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001595;transcript_name=HG00642_ch_T0001595;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001595:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22909104	22910697	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00642_ch_T0001595;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001595;transcript_name=HG00642_ch_T0001595;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001595:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22910698	22910904	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00642_ch_T0001595;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001595;transcript_name=HG00642_ch_T0001595;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001595:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22925799	22936818	1000	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_G0000533;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=HG00642_ch_T0001597;Name=ENSG00000236951
HG00642_chrY	CAT	exon	22925799	22926593	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001597;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001597:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22926594	22929359	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001597;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001597:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22929360	22929500	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001597;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001597:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22929501	22936691	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001597;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=intron:HG00642_ch_T0001597:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936692	22936818	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00642_ch_T0001597;gene_id=HG00642_ch_G0000533;Parent=HG00642_ch_T0001597;transcript_name=HG00642_ch_T0001597;gene_name=ENSG00000236951;ID=exon:HG00642_ch_T0001597:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22921359	22936239	.	+	.	source_gene_common_name=TTTY6B;source_gene=ENSG00000131548.8;alternative_source_transcripts=ENST00000253848.4;gene_id=HG00642_ch_G0000534;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG00642_ch_G0000534;Name=TTTY6B
HG00642_chrY	CAT	transcript	22921359	22936239	1000	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_G0000534;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=HG00642_ch_T0001596;Name=TTTY6B
HG00642_chrY	CAT	exon	22921359	22921413	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22921414	22923788	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22923789	22923862	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22923863	22928603	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22928604	22928765	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22928766	22931047	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22931048	22931208	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22931209	22934373	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22934374	22934487	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22934488	22934705	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22934706	22934843	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22934844	22936000	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001596:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936001	22936239	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00642_ch_T0001596;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001596;transcript_name=HG00642_ch_T0001596;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001596:6;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22930674	22936239	1000	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_G0000534;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=HG00642_ch_T0001598;Name=TTTY6B
HG00642_chrY	CAT	exon	22930674	22930803	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22930804	22931047	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001598:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22931048	22931208	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22931209	22934373	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001598:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22934374	22934487	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22934488	22934705	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001598:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22934706	22934843	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22934844	22934961	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001598:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22934962	22935052	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22935053	22936000	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001598:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936001	22936239	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00642_ch_T0001598;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001598;transcript_name=HG00642_ch_T0001598;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001598:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22932113	22936237	1000	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00642_ch_T0001599;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_G0000534;transcript_name=HG00642_ch_T0001599;gene_name=TTTY6B;ID=HG00642_ch_T0001599;Name=TTTY6B
HG00642_chrY	CAT	exon	22932113	22932378	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00642_ch_T0001599;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001599;transcript_name=HG00642_ch_T0001599;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001599:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22932379	22936000	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00642_ch_T0001599;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001599;transcript_name=HG00642_ch_T0001599;gene_name=TTTY6B;ID=intron:HG00642_ch_T0001599:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22936001	22936237	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00642_ch_T0001599;gene_id=HG00642_ch_G0000534;Parent=HG00642_ch_T0001599;transcript_name=HG00642_ch_T0001599;gene_name=TTTY6B;ID=exon:HG00642_ch_T0001599:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22957951	22972419	.	-	.	source_gene_common_name=RBMY1J;source_gene=ENSG00000226941.9;alternative_source_transcripts=ENST00000250831.6;gene_id=HG00642_ch_G0000535;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff;ID=HG00642_ch_G0000535;Name=RBMY1J
HG00642_chrY	CAT	transcript	22957951	22972419	100	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_G0000535;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=HG00642_ch_T0001600;Name=RBMY1J
HG00642_chrY	CAT	exon	22957951	22958527	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22958229	22958527	.	-	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	22958229	22958231	.	-	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=stop_codon:HG00642_ch_T0001600;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22958528	22958938	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22958939	22959027	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22958939	22959027	.	-	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22959028	22959113	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22959114	22959224	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22959114	22959224	.	-	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22959225	22960147	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22960148	22960258	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22960148	22960258	.	-	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22960259	22960692	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22960693	22960803	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22960693	22960803	.	-	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22960804	22961243	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22961244	22961354	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22961244	22961354	.	-	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22961355	22962309	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22962310	22962424	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22962310	22962424	.	-	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22962425	22964434	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22964435	22964587	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22964435	22964587	.	-	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22964588	22966502	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22966503	22966680	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22966503	22966680	.	-	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22966681	22969699	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22969700	22969803	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22969700	22969803	.	-	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22969804	22970271	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22970272	22970384	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	22970272	22970380	.	-	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=CDS:HG00642_ch_T0001600:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	22970378	22970380	.	-	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=start_codon:HG00642_ch_T0001600;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22970385	22972245	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001600:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22972246	22972419	.	-	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00642_ch_T0001600;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001600;transcript_name=HG00642_ch_T0001600;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001600:11;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	22957951	22972368	1000	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_G0000535;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=HG00642_ch_T0001601;Name=RBMY1J
HG00642_chrY	CAT	exon	22957951	22958527	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22958528	22958938	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22958939	22959027	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22959028	22959113	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22959114	22959224	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22959225	22960147	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22960148	22960258	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22960259	22960692	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22960693	22960803	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22960804	22961243	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22961244	22961354	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22961355	22962309	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22962310	22962424	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22962425	22964434	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22964435	22964587	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22964588	22969699	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22969700	22969803	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22969804	22970271	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22970272	22970384	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22970385	22972245	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=intron:HG00642_ch_T0001601:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22972246	22972368	.	-	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00642_ch_T0001601;gene_id=HG00642_ch_G0000535;Parent=HG00642_ch_T0001601;transcript_name=HG00642_ch_T0001601;gene_name=RBMY1J;ID=exon:HG00642_ch_T0001601:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22973261	22975426	.	+	.	source_gene_common_name=TSPY21P;source_gene=ENSG00000237902.1;gene_id=HG00642_ch_G0000536;gene_biotype=unprocessed_pseudogene;gene_name=TSPY21P;gene_sources=liftoff;ID=HG00642_ch_G0000536;Name=TSPY21P
HG00642_chrY	CAT	transcript	22973261	22975426	1000	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_G0000536;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=HG00642_ch_T0001602;Name=TSPY21P
HG00642_chrY	CAT	exon	22973261	22973654	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=exon:HG00642_ch_T0001602:0;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22973655	22974642	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=intron:HG00642_ch_T0001602:0;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22974643	22974727	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=exon:HG00642_ch_T0001602:1;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22974728	22974971	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=intron:HG00642_ch_T0001602:1;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22974972	22975037	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=exon:HG00642_ch_T0001602:2;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22975038	22975123	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=intron:HG00642_ch_T0001602:2;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22975124	22975267	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=exon:HG00642_ch_T0001602:3;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22975268	22975384	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=intron:HG00642_ch_T0001602:3;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22975385	22975426	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG00642_ch_T0001602;gene_id=HG00642_ch_G0000536;Parent=HG00642_ch_T0001602;transcript_name=HG00642_ch_T0001602;gene_name=TSPY21P;ID=exon:HG00642_ch_T0001602:4;Name=TSPY21P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	22987840	22993123	.	+	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG00642_ch_G0000537;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG00642_ch_G0000537;Name=RBMY2UP
HG00642_chrY	CAT	transcript	22987840	22993123	1000	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_G0000537;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=HG00642_ch_T0001603;Name=RBMY2UP
HG00642_chrY	CAT	exon	22987840	22987947	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_T0001603;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001603:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22987948	22988350	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_T0001603;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=intron:HG00642_ch_T0001603:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22988351	22988453	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_T0001603;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001603:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	22988454	22993010	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_T0001603;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=intron:HG00642_ch_T0001603:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	22993011	22993123	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001603;gene_id=HG00642_ch_G0000537;Parent=HG00642_ch_T0001603;transcript_name=HG00642_ch_T0001603;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001603:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23043329	23045377	.	-	.	source_gene_common_name=TTTY25P;source_gene=ENSG00000259247.1;alternative_source_transcripts=ENST00000558356.1;gene_id=HG00642_ch_G0000538;gene_biotype=unprocessed_pseudogene;gene_name=TTTY25P;gene_sources=liftoff;ID=HG00642_ch_G0000538;Name=TTTY25P
HG00642_chrY	CAT	transcript	23043329	23045377	1000	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00642_ch_T0001604;gene_id=HG00642_ch_G0000538;Parent=HG00642_ch_G0000538;transcript_name=HG00642_ch_T0001604;gene_name=TTTY25P;ID=HG00642_ch_T0001604;Name=TTTY25P
HG00642_chrY	CAT	exon	23043329	23044260	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00642_ch_T0001604;gene_id=HG00642_ch_G0000538;Parent=HG00642_ch_T0001604;transcript_name=HG00642_ch_T0001604;gene_name=TTTY25P;ID=exon:HG00642_ch_T0001604:0;Name=TTTY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23044261	23044804	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00642_ch_T0001604;gene_id=HG00642_ch_G0000538;Parent=HG00642_ch_T0001604;transcript_name=HG00642_ch_T0001604;gene_name=TTTY25P;ID=intron:HG00642_ch_T0001604:0;Name=TTTY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23044805	23045377	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00642_ch_T0001604;gene_id=HG00642_ch_G0000538;Parent=HG00642_ch_T0001604;transcript_name=HG00642_ch_T0001604;gene_name=TTTY25P;ID=exon:HG00642_ch_T0001604:1;Name=TTTY25P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23054004	23064965	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000243040.7;gene_id=HG00642_ch_G0000539;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG00642_ch_G0000539;Name=RBMY2FP
HG00642_chrY	CAT	transcript	23054004	23064965	1000	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_G0000539;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=HG00642_ch_T0001605;Name=RBMY2FP
HG00642_chrY	CAT	exon	23054004	23054305	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23054306	23054719	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23054720	23054808	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23054809	23054888	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23054889	23054999	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23055000	23055364	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23055365	23055466	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23055467	23056931	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23056932	23057046	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23057047	23059081	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23059082	23059234	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23059235	23061158	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23061159	23061336	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23061337	23064330	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23064331	23064434	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23064435	23064856	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001605:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23064857	23064965	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001605;gene_id=HG00642_ch_G0000539;Parent=HG00642_ch_T0001605;transcript_name=HG00642_ch_T0001605;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001605:8;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23059624	23067000	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000290336.2;gene_id=HG00642_ch_G0000540;gene_biotype=lncRNA;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG00642_ch_G0000540;Name=RBMY2FP
HG00642_chrY	CAT	transcript	23059624	23067000	1000	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_G0000540;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=HG00642_ch_T0001606;Name=RBMY2FP
HG00642_chrY	CAT	exon	23059624	23061336	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001606:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23061337	23064330	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001606:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23064331	23064434	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001606:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23064435	23064856	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001606:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23064857	23064969	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001606:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23064970	23066858	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001606:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23066859	23067000	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001606;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001606;transcript_name=HG00642_ch_T0001606;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001606:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23064718	23066945	1000	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_G0000540;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=HG00642_ch_T0001607;Name=RBMY2FP
HG00642_chrY	CAT	exon	23064718	23064969	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001607;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001607:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23064970	23066118	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001607;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001607:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23066119	23066205	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001607;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001607:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23066206	23066858	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001607;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=intron:HG00642_ch_T0001607:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23066859	23066945	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00642_ch_T0001607;gene_id=HG00642_ch_G0000540;Parent=HG00642_ch_T0001607;transcript_name=HG00642_ch_T0001607;gene_name=RBMY2FP;ID=exon:HG00642_ch_T0001607:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23067878	23069904	.	+	.	source_gene_common_name=TSPY22P;source_gene=ENSG00000229940.1;alternative_source_transcripts=ENST00000427496.1;gene_id=HG00642_ch_G0000541;gene_biotype=unprocessed_pseudogene;gene_name=TSPY22P;gene_sources=liftoff;ID=HG00642_ch_G0000541;Name=TSPY22P
HG00642_chrY	CAT	transcript	23067878	23069904	1000	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_G0000541;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=HG00642_ch_T0001608;Name=TSPY22P
HG00642_chrY	CAT	exon	23067878	23068269	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_T0001608;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=exon:HG00642_ch_T0001608:0;Name=TSPY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23068270	23069608	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_T0001608;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=intron:HG00642_ch_T0001608:0;Name=TSPY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23069609	23069674	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_T0001608;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=exon:HG00642_ch_T0001608:1;Name=TSPY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23069675	23069758	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_T0001608;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=intron:HG00642_ch_T0001608:1;Name=TSPY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23069759	23069904	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00642_ch_T0001608;gene_id=HG00642_ch_G0000541;Parent=HG00642_ch_T0001608;transcript_name=HG00642_ch_T0001608;gene_name=TSPY22P;ID=exon:HG00642_ch_T0001608:2;Name=TSPY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23076957	23079035	.	+	.	source_gene_common_name=TTTY5;source_gene=ENSG00000215560.2;alternative_source_transcripts=ENST00000400581.2;gene_id=HG00642_ch_G0000542;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG00642_ch_G0000542;Name=TTTY5
HG00642_chrY	CAT	transcript	23076957	23079035	1000	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00642_ch_T0001609;gene_id=HG00642_ch_G0000542;Parent=HG00642_ch_G0000542;transcript_name=HG00642_ch_T0001609;gene_name=TTTY5;ID=HG00642_ch_T0001609;Name=TTTY5
HG00642_chrY	CAT	exon	23076957	23077527	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00642_ch_T0001609;gene_id=HG00642_ch_G0000542;Parent=HG00642_ch_T0001609;transcript_name=HG00642_ch_T0001609;gene_name=TTTY5;ID=exon:HG00642_ch_T0001609:0;Name=TTTY5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23077528	23078044	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00642_ch_T0001609;gene_id=HG00642_ch_G0000542;Parent=HG00642_ch_T0001609;transcript_name=HG00642_ch_T0001609;gene_name=TTTY5;ID=intron:HG00642_ch_T0001609:0;Name=TTTY5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23078045	23079035	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00642_ch_T0001609;gene_id=HG00642_ch_G0000542;Parent=HG00642_ch_T0001609;transcript_name=HG00642_ch_T0001609;gene_name=TTTY5;ID=exon:HG00642_ch_T0001609:1;Name=TTTY5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23159321	23166570	.	-	.	source_gene_common_name=RBMY1KP;source_gene=ENSG00000229234.1;alternative_source_transcripts=ENST00000423480.1;gene_id=HG00642_ch_G0000543;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1KP;gene_sources=liftoff;ID=HG00642_ch_G0000543;Name=RBMY1KP
HG00642_chrY	CAT	transcript	23159321	23166570	1000	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_G0000543;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=HG00642_ch_T0001610;Name=RBMY1KP
HG00642_chrY	CAT	exon	23159321	23159435	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=exon:HG00642_ch_T0001610:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23159436	23163299	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=intron:HG00642_ch_T0001610:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23163300	23163476	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=exon:HG00642_ch_T0001610:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23163477	23165873	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=intron:HG00642_ch_T0001610:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23165874	23165944	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=exon:HG00642_ch_T0001610:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23165945	23166457	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=intron:HG00642_ch_T0001610:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23166458	23166570	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00642_ch_T0001610;gene_id=HG00642_ch_G0000543;Parent=HG00642_ch_T0001610;transcript_name=HG00642_ch_T0001610;gene_name=RBMY1KP;ID=exon:HG00642_ch_T0001610:3;Name=RBMY1KP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23172189	23177472	.	-	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG00642_ch_G0000544;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG00642_ch_G0000544;Name=RBMY2UP
HG00642_chrY	CAT	transcript	23172189	23177472	1000	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_G0000544;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=HG00642_ch_T0001611;Name=RBMY2UP
HG00642_chrY	CAT	exon	23172189	23172301	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_T0001611;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001611:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23172302	23176858	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_T0001611;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=intron:HG00642_ch_T0001611:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23176859	23176961	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_T0001611;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001611:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23176962	23177364	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_T0001611;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=intron:HG00642_ch_T0001611:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23177365	23177472	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00642_ch_T0001611;gene_id=HG00642_ch_G0000544;Parent=HG00642_ch_T0001611;transcript_name=HG00642_ch_T0001611;gene_name=RBMY2UP;ID=exon:HG00642_ch_T0001611:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23189880	23192051	.	-	.	source_gene_common_name=TSPY23P;source_gene=ENSG00000229159.1;gene_id=HG00642_ch_G0000545;gene_biotype=unprocessed_pseudogene;gene_name=TSPY23P;gene_sources=liftoff;ID=HG00642_ch_G0000545;Name=TSPY23P
HG00642_chrY	CAT	transcript	23189880	23192051	1000	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_G0000545;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=HG00642_ch_T0001612;Name=TSPY23P
HG00642_chrY	CAT	exon	23189880	23189927	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=exon:HG00642_ch_T0001612:0;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23189928	23190044	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=intron:HG00642_ch_T0001612:0;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23190045	23190188	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=exon:HG00642_ch_T0001612:1;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23190189	23190275	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=intron:HG00642_ch_T0001612:1;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23190276	23190346	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=exon:HG00642_ch_T0001612:2;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23190347	23190584	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=intron:HG00642_ch_T0001612:2;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23190585	23190666	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=exon:HG00642_ch_T0001612:3;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23190667	23191657	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=intron:HG00642_ch_T0001612:3;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23191658	23192051	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG00642_ch_T0001612;gene_id=HG00642_ch_G0000545;Parent=HG00642_ch_T0001612;transcript_name=HG00642_ch_T0001612;gene_name=TSPY23P;ID=exon:HG00642_ch_T0001612:4;Name=TSPY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23192919	23207359	.	+	.	source_gene_common_name=RBMY1F;source_gene=ENSG00000169800.14;alternative_source_transcripts=ENST00000454978.2;gene_id=HG00642_ch_G0000546;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff;ID=HG00642_ch_G0000546;Name=RBMY1F
HG00642_chrY	CAT	transcript	23192919	23207359	100	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_G0000546;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=HG00642_ch_T0001613;Name=RBMY1F
HG00642_chrY	CAT	exon	23192919	23193066	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23193067	23194927	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23194928	23195040	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23194932	23195040	.	+	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	23194932	23194934	.	+	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=start_codon:HG00642_ch_T0001613;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195041	23195506	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23195507	23195610	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23195507	23195610	.	+	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195611	23198629	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23198630	23198807	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23198630	23198807	.	+	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23198808	23200722	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23200723	23200875	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23200723	23200875	.	+	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23200876	23202885	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23202886	23203000	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23202886	23203000	.	+	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23203001	23203955	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23203956	23204066	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23203956	23204066	.	+	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204067	23204506	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23204507	23204617	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23204507	23204617	.	+	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204618	23205051	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23205052	23205162	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23205052	23205162	.	+	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23205163	23206282	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206283	23206371	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23206283	23206371	.	+	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23206372	23206782	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206783	23207359	.	+	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001613:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23206783	23207081	.	+	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001613:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	23207079	23207081	.	+	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00642_ch_T0001613;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001613;transcript_name=HG00642_ch_T0001613;gene_name=RBMY1F;ID=stop_codon:HG00642_ch_T0001613;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23192944	23207359	1000	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_G0000546;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=HG00642_ch_T0001614;Name=RBMY1F
HG00642_chrY	CAT	exon	23192944	23193066	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23193067	23194927	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23194928	23195040	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195041	23195506	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23195507	23195610	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195611	23200722	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23200723	23200875	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23200876	23202885	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23202886	23203000	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23203001	23203955	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23203956	23204066	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204067	23204506	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23204507	23204617	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204618	23205051	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23205052	23205162	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23205163	23206085	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206086	23206196	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23206197	23206282	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206283	23206371	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23206372	23206782	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001614:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206783	23207359	.	+	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00642_ch_T0001614;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001614;transcript_name=HG00642_ch_T0001614;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001614:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23192978	23207359	100	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_G0000546;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=HG00642_ch_T0001615;Name=RBMY1F
HG00642_chrY	CAT	exon	23192978	23193066	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23193067	23194927	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23194928	23195040	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23194932	23195040	.	+	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	23194932	23194934	.	+	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=start_codon:HG00642_ch_T0001615;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195041	23195506	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23195507	23195610	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23195507	23195610	.	+	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23195611	23198629	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23198630	23198807	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23198630	23198807	.	+	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23198808	23200722	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23200723	23200875	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23200723	23200875	.	+	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23200876	23202885	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23202886	23203000	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23202886	23203000	.	+	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23203001	23203955	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23203956	23204066	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23203956	23204066	.	+	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204067	23204506	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23204507	23204617	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23204507	23204617	.	+	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23204618	23205051	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23205052	23205162	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23205052	23205162	.	+	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23205163	23206085	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206086	23206196	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23206086	23206196	.	+	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23206197	23206282	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206283	23206371	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23206283	23206371	.	+	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23206372	23206782	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=intron:HG00642_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23206783	23207359	.	+	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=exon:HG00642_ch_T0001615:11;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23206783	23207081	.	+	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=CDS:HG00642_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	23207079	23207081	.	+	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00642_ch_T0001615;gene_id=HG00642_ch_G0000546;Parent=HG00642_ch_T0001615;transcript_name=HG00642_ch_T0001615;gene_name=RBMY1F;ID=stop_codon:HG00642_ch_T0001615;Name=RBMY1F;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23228402	23304125	.	+	.	source_gene_common_name=ENSG00000235059;source_gene=ENSG00000235059.7;alternative_source_transcripts=ENST00000446299.6;gene_id=HG00642_ch_G0000547;gene_biotype=lncRNA;gene_name=ENSG00000235059;gene_sources=liftoff;ID=HG00642_ch_G0000547;Name=ENSG00000235059
HG00642_chrY	CAT	transcript	23228402	23274201	1000	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=HG00642_ch_T0001616;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23228402	23228618	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23228619	23228952	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23228953	23229262	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23229263	23235809	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23235810	23235950	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23235951	23245925	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23245926	23246148	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23246149	23246456	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23246457	23246542	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23246543	23253721	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23253722	23253840	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23253841	23254270	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23254271	23254624	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23254625	23268251	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23268252	23268341	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23268342	23269807	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23269808	23270143	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23270144	23271943	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23271944	23272029	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23272030	23272149	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23272150	23272346	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23272347	23272890	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23272891	23273008	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273009	23273523	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001616:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23273524	23274201	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00642_ch_T0001616;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001616;transcript_name=HG00642_ch_T0001616;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001616:12;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23254428	23274388	1000	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=HG00642_ch_T0001619;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23254428	23254624	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001619;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001619:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23254625	23272886	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001619;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001619:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23272887	23273008	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001619;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001619:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273009	23273523	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001619;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001619:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23273524	23274388	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00642_ch_T0001619;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001619;transcript_name=HG00642_ch_T0001619;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001619:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23268180	23274381	1000	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=HG00642_ch_T0001620;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23268180	23268341	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001620:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23268342	23269807	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001620:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23269808	23270143	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001620:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23270144	23272886	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001620:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23272887	23273008	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001620:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273009	23273523	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001620:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23273524	23274381	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00642_ch_T0001620;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001620;transcript_name=HG00642_ch_T0001620;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001620:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23270024	23275079	1000	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=HG00642_ch_T0001621;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23270024	23270143	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001621:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23270144	23272890	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001621:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23272891	23273008	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001621:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273009	23273523	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001621:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23273524	23273788	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001621:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273789	23274837	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001621:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23274838	23275079	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00642_ch_T0001621;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001621;transcript_name=HG00642_ch_T0001621;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001621:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23273524	23304125	1000	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=HG00642_ch_T0001622;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23273524	23273788	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273789	23279882	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001622:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23279883	23279971	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23279972	23280072	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001622:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23280073	23280159	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23280160	23291000	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001622:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23291001	23291121	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23291122	23293696	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001622:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23293697	23293812	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23293813	23303299	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001622:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23303300	23304125	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00642_ch_T0001622;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001622;transcript_name=HG00642_ch_T0001622;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001622:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23273524	23304125	1000	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_G0000547;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=HG00642_ch_T0001623;Name=ENSG00000235059
HG00642_chrY	CAT	exon	23273524	23273788	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23273789	23279882	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23279883	23279971	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23279972	23280072	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23280073	23280159	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23280160	23291000	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23291001	23291121	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23291122	23293696	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23293697	23293812	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23293813	23302125	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23302126	23302240	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23302241	23303299	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=intron:HG00642_ch_T0001623:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23303300	23304125	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00642_ch_T0001623;gene_id=HG00642_ch_G0000547;Parent=HG00642_ch_T0001623;transcript_name=HG00642_ch_T0001623;gene_name=ENSG00000235059;ID=exon:HG00642_ch_T0001623:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23229071	23243963	.	-	.	source_gene_common_name=TTTY6;source_gene=ENSG00000131538.8;alternative_source_transcripts=ENST00000253838.4;gene_id=HG00642_ch_G0000548;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG00642_ch_G0000548;Name=TTTY6
HG00642_chrY	CAT	transcript	23229071	23243963	1000	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_G0000548;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=HG00642_ch_T0001617;Name=TTTY6
HG00642_chrY	CAT	exon	23229071	23229309	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:0;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23229310	23230466	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:0;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23230467	23230604	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:1;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23230605	23230822	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:1;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23230823	23230936	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:2;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23230937	23234101	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:2;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23234102	23234262	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:3;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23234263	23236544	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:3;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23236545	23236706	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:4;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23236707	23241447	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:4;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23241448	23241521	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:5;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23241522	23243908	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=intron:HG00642_ch_T0001617:5;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23243909	23243963	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00642_ch_T0001617;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001617;transcript_name=HG00642_ch_T0001617;gene_name=TTTY6;ID=exon:HG00642_ch_T0001617:6;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23229073	23233212	1000	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00642_ch_T0001618;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_G0000548;transcript_name=HG00642_ch_T0001618;gene_name=TTTY6;ID=HG00642_ch_T0001618;Name=TTTY6
HG00642_chrY	CAT	exon	23229073	23229309	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00642_ch_T0001618;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001618;transcript_name=HG00642_ch_T0001618;gene_name=TTTY6;ID=exon:HG00642_ch_T0001618:0;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23229310	23232931	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00642_ch_T0001618;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001618;transcript_name=HG00642_ch_T0001618;gene_name=TTTY6;ID=intron:HG00642_ch_T0001618:0;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23232932	23233212	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00642_ch_T0001618;gene_id=HG00642_ch_G0000548;Parent=HG00642_ch_T0001618;transcript_name=HG00642_ch_T0001618;gene_name=TTTY6;ID=exon:HG00642_ch_T0001618:1;Name=TTTY6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23306730	23307061	.	-	.	source_gene_common_name=ELOCP8;source_gene=ENSG00000234131.1;alternative_source_transcripts=ENST00000439309.1;gene_id=HG00642_ch_G0000549;gene_biotype=processed_pseudogene;gene_name=ELOCP8;gene_sources=liftoff;ID=HG00642_ch_G0000549;Name=ELOCP8
HG00642_chrY	CAT	transcript	23306730	23307061	1000	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG00642_ch_T0001624;gene_id=HG00642_ch_G0000549;Parent=HG00642_ch_G0000549;transcript_name=HG00642_ch_T0001624;gene_name=ELOCP8;ID=HG00642_ch_T0001624;Name=ELOCP8
HG00642_chrY	CAT	exon	23306730	23307061	.	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG00642_ch_T0001624;gene_id=HG00642_ch_G0000549;Parent=HG00642_ch_T0001624;transcript_name=HG00642_ch_T0001624;gene_name=ELOCP8;ID=exon:HG00642_ch_T0001624:0;Name=ELOCP8;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23310169	23311183	.	-	.	source_gene_common_name=CDY13P;source_gene=ENSG00000224873.1;alternative_source_transcripts=ENST00000445813.1;gene_id=HG00642_ch_G0000550;gene_biotype=unprocessed_pseudogene;gene_name=CDY13P;gene_sources=liftoff;ID=HG00642_ch_G0000550;Name=CDY13P
HG00642_chrY	CAT	transcript	23310169	23311183	1000	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG00642_ch_T0001625;gene_id=HG00642_ch_G0000550;Parent=HG00642_ch_G0000550;transcript_name=HG00642_ch_T0001625;gene_name=CDY13P;ID=HG00642_ch_T0001625;Name=CDY13P
HG00642_chrY	CAT	exon	23310169	23311183	.	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG00642_ch_T0001625;gene_id=HG00642_ch_G0000550;Parent=HG00642_ch_T0001625;transcript_name=HG00642_ch_T0001625;gene_name=CDY13P;ID=exon:HG00642_ch_T0001625:0;Name=CDY13P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23317770	23326128	.	+	.	source_gene_common_name=USP9YP24;source_gene=ENSG00000230814.1;alternative_source_transcripts=ENST00000434374.1;gene_id=HG00642_ch_G0000551;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP24;gene_sources=liftoff;ID=HG00642_ch_G0000551;Name=USP9YP24
HG00642_chrY	CAT	transcript	23317770	23326128	1000	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_G0000551;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=HG00642_ch_T0001626;Name=USP9YP24
HG00642_chrY	CAT	exon	23317770	23317990	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=exon:HG00642_ch_T0001626:0;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23317991	23319792	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=intron:HG00642_ch_T0001626:0;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23319793	23319911	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=exon:HG00642_ch_T0001626:1;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23319912	23321697	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=intron:HG00642_ch_T0001626:1;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23321698	23321886	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=exon:HG00642_ch_T0001626:2;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23321887	23324244	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=intron:HG00642_ch_T0001626:2;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23324245	23324373	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=exon:HG00642_ch_T0001626:3;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23324374	23326089	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=intron:HG00642_ch_T0001626:3;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23326090	23326128	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00642_ch_T0001626;gene_id=HG00642_ch_G0000551;Parent=HG00642_ch_T0001626;transcript_name=HG00642_ch_T0001626;gene_name=USP9YP24;ID=exon:HG00642_ch_T0001626:4;Name=USP9YP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23326408	23374753	.	+	.	source_gene_common_name=ENSG00000300637;source_gene=ENSG00000300637.1;gene_id=HG00642_ch_G0000552;gene_biotype=lncRNA;gene_name=ENSG00000300637;gene_sources=liftoff;ID=HG00642_ch_G0000552;Name=ENSG00000300637
HG00642_chrY	CAT	transcript	23326408	23367254	1000	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_G0000552;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=HG00642_ch_T0001627;Name=ENSG00000300637
HG00642_chrY	CAT	exon	23326408	23326729	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001627;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001627:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23326730	23331293	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001627;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=intron:HG00642_ch_T0001627:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23331294	23331455	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001627;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001627:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23331456	23366625	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001627;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=intron:HG00642_ch_T0001627:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23366626	23367254	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001627;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001627;transcript_name=HG00642_ch_T0001627;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001627:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23326468	23374753	1000	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_G0000552;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=HG00642_ch_T0001628;Name=ENSG00000300637
HG00642_chrY	CAT	exon	23326468	23326729	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001628:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23326730	23331293	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=intron:HG00642_ch_T0001628:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23331294	23331455	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001628:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23331456	23366625	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=intron:HG00642_ch_T0001628:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23366626	23366928	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001628:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23366929	23374478	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=intron:HG00642_ch_T0001628:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23374479	23374753	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00642_ch_T0001628;gene_id=HG00642_ch_G0000552;Parent=HG00642_ch_T0001628;transcript_name=HG00642_ch_T0001628;gene_name=ENSG00000300637;ID=exon:HG00642_ch_T0001628:3;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23326536	23327338	.	+	.	source_gene_common_name=HSFY7P;source_gene=ENSG00000228571.1;gene_id=HG00642_ch_G0000553;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY7P;gene_sources=liftoff;ID=HG00642_ch_G0000553;Name=HSFY7P
HG00642_chrY	CAT	transcript	23326536	23327338	1000	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00642_ch_T0001629;gene_id=HG00642_ch_G0000553;Parent=HG00642_ch_G0000553;transcript_name=HG00642_ch_T0001629;gene_name=HSFY7P;ID=HG00642_ch_T0001629;Name=HSFY7P
HG00642_chrY	CAT	exon	23326536	23326694	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00642_ch_T0001629;gene_id=HG00642_ch_G0000553;Parent=HG00642_ch_T0001629;transcript_name=HG00642_ch_T0001629;gene_name=HSFY7P;ID=exon:HG00642_ch_T0001629:0;Name=HSFY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23326695	23327179	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00642_ch_T0001629;gene_id=HG00642_ch_G0000553;Parent=HG00642_ch_T0001629;transcript_name=HG00642_ch_T0001629;gene_name=HSFY7P;ID=intron:HG00642_ch_T0001629:0;Name=HSFY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23327180	23327338	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00642_ch_T0001629;gene_id=HG00642_ch_G0000553;Parent=HG00642_ch_T0001629;transcript_name=HG00642_ch_T0001629;gene_name=HSFY7P;ID=exon:HG00642_ch_T0001629:1;Name=HSFY7P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23344393	23347561	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00642_ch_G0000554;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00642_ch_G0000554;Name=ENSG00000295422
HG00642_chrY	CAT	transcript	23344393	23347561	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_G0000554;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=HG00642_ch_T0001630;Name=ENSG00000295422
HG00642_chrY	CAT	exon	23344393	23345737	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_T0001630;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001630:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23345738	23347272	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_T0001630;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001630:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23347273	23347333	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_T0001630;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001630:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23347334	23347450	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_T0001630;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001630:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23347451	23347561	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001630;gene_id=HG00642_ch_G0000554;Parent=HG00642_ch_T0001630;transcript_name=HG00642_ch_T0001630;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001630:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23370483	23403572	.	-	.	source_gene_common_name=OFD1P9Y;source_gene=ENSG00000230476.1;alternative_source_transcripts=ENST00000417699.1;gene_id=HG00642_ch_G0000555;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P9Y;gene_sources=liftoff;ID=HG00642_ch_G0000555;Name=OFD1P9Y
HG00642_chrY	CAT	transcript	23370483	23403572	1000	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_G0000555;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=HG00642_ch_T0001631;Name=OFD1P9Y
HG00642_chrY	CAT	exon	23370483	23370576	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23370577	23370874	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23370875	23370941	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23370942	23372137	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23372138	23372292	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23372293	23378925	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23378926	23379026	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23379027	23398364	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23398365	23398475	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23398476	23398848	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23398849	23399464	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23399465	23401181	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23401182	23401291	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23401292	23401825	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23401826	23401955	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23401956	23403465	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=intron:HG00642_ch_T0001631:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23403466	23403572	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00642_ch_T0001631;gene_id=HG00642_ch_G0000555;Parent=HG00642_ch_T0001631;transcript_name=HG00642_ch_T0001631;gene_name=OFD1P9Y;ID=exon:HG00642_ch_T0001631:8;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23425068	23430519	.	+	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=HG00642_ch_G0000556;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG00642_ch_G0000556;Name=ENSG00000305658
HG00642_chrY	CAT	transcript	23425068	23430519	1000	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_G0000556;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=HG00642_ch_T0001632;Name=ENSG00000305658
HG00642_chrY	CAT	exon	23425068	23425406	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001632:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23425407	23427320	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001632:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23427321	23427454	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001632:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23427455	23429323	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001632:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23429324	23429450	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001632:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23429451	23429814	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001632:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23429815	23430519	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00642_ch_T0001632;gene_id=HG00642_ch_G0000556;Parent=HG00642_ch_T0001632;transcript_name=HG00642_ch_T0001632;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001632:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23435522	23435818	.	-	.	source_gene_common_name=ENSG00000273589;source_gene=ENSG00000273589.1;alternative_source_transcripts=ENST00000612840.1;gene_id=HG00642_ch_G0000557;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000273589;gene_sources=liftoff;ID=HG00642_ch_G0000557;Name=ENSG00000273589
HG00642_chrY	CAT	transcript	23435522	23435818	1000	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG00642_ch_T0001633;gene_id=HG00642_ch_G0000557;Parent=HG00642_ch_G0000557;transcript_name=HG00642_ch_T0001633;gene_name=ENSG00000273589;ID=HG00642_ch_T0001633;Name=ENSG00000273589
HG00642_chrY	CAT	exon	23435522	23435818	.	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG00642_ch_T0001633;gene_id=HG00642_ch_G0000557;Parent=HG00642_ch_T0001633;transcript_name=HG00642_ch_T0001633;gene_name=ENSG00000273589;ID=exon:HG00642_ch_T0001633:0;Name=ENSG00000273589;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23436734	23446580	.	+	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;gene_id=HG00642_ch_G0000558;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=HG00642_ch_G0000558;Name=ENSG00000293249
HG00642_chrY	CAT	transcript	23436734	23446580	1000	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_G0000558;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=HG00642_ch_T0001634;Name=ENSG00000293249
HG00642_chrY	CAT	exon	23436734	23436883	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23436884	23437637	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23437638	23437717	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23437718	23438731	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23438732	23438844	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23438845	23439297	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23439298	23439401	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23439402	23442109	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23442110	23442287	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23442288	23444222	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444223	23444375	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23444376	23446382	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001634:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23446383	23446580	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001634;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001634;transcript_name=HG00642_ch_T0001634;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001634:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23436753	23445213	1000	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_G0000558;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=HG00642_ch_T0001635;Name=ENSG00000293249
HG00642_chrY	CAT	exon	23436753	23436883	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23436884	23437637	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23437638	23437717	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23437718	23438731	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23438732	23438844	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23438845	23439297	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23439298	23439401	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23439402	23442109	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23442110	23442287	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23442288	23444222	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444223	23444375	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23444376	23444953	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001635:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444954	23445213	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001635;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001635;transcript_name=HG00642_ch_T0001635;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001635:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23436762	23445213	1000	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_G0000558;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=HG00642_ch_T0001636;Name=ENSG00000293249
HG00642_chrY	CAT	exon	23436762	23436883	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23436884	23437534	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23437535	23437717	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23437718	23438731	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23438732	23438844	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23438845	23439297	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23439298	23439401	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23439402	23442109	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23442110	23442287	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23442288	23444222	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444223	23444375	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23444376	23444953	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001636:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444954	23445213	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001636;gene_id=HG00642_ch_G0000558;Parent=HG00642_ch_T0001636;transcript_name=HG00642_ch_T0001636;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001636:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23438736	23448370	.	+	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11_1;gene_id=HG00642_ch_G0000559;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=HG00642_ch_G0000559;Name=RBMY2CP
HG00642_chrY	CAT	transcript	23438736	23448370	1000	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_G0000559;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=HG00642_ch_T0001637;Name=RBMY2CP
HG00642_chrY	CAT	exon	23438736	23438844	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23438845	23439297	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23439298	23439401	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23439402	23442109	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23442110	23442287	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23442288	23444222	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23444223	23444375	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23444376	23446382	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23446383	23446497	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23446498	23447366	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23447367	23447477	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23447478	23447559	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23447560	23447647	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23447648	23448071	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001637:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23448072	23448370	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001637;gene_id=HG00642_ch_G0000559;Parent=HG00642_ch_T0001637;transcript_name=HG00642_ch_T0001637;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001637:7;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23460114	23462357	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;gene_id=HG00642_ch_G0000560;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=HG00642_ch_G0000560;Name=ENSG00000224917
HG00642_chrY	CAT	transcript	23460114	23462357	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_G0000560;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=HG00642_ch_T0001638;Name=ENSG00000224917
HG00642_chrY	CAT	exon	23460114	23460187	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=exon:HG00642_ch_T0001638:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23460188	23460308	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=intron:HG00642_ch_T0001638:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23460309	23460368	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=exon:HG00642_ch_T0001638:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23460369	23460544	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=intron:HG00642_ch_T0001638:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23460545	23460653	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=exon:HG00642_ch_T0001638:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23460654	23460868	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=intron:HG00642_ch_T0001638:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23460869	23460923	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=exon:HG00642_ch_T0001638:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23460924	23461955	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=intron:HG00642_ch_T0001638:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23461956	23462357	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00642_ch_T0001638;gene_id=HG00642_ch_G0000560;Parent=HG00642_ch_T0001638;transcript_name=HG00642_ch_T0001638;gene_name=ENSG00000224917;ID=exon:HG00642_ch_T0001638:4;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23483442	23561644	.	-	.	source_gene_common_name=ENSG00000306918;source_gene=ENSG00000306918.1;gene_id=HG00642_ch_G0000561;gene_biotype=lncRNA;gene_name=ENSG00000306918;gene_sources=liftoff;ID=HG00642_ch_G0000561;Name=ENSG00000306918
HG00642_chrY	CAT	transcript	23483442	23561628	1000	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_G0000561;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=HG00642_ch_T0001639;Name=ENSG00000306918
HG00642_chrY	CAT	exon	23483442	23483724	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001639:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23483725	23485344	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001639:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23485345	23485388	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001639:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23485389	23549803	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001639:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23549804	23549911	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001639:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23549912	23553058	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001639:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23553059	23553147	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001639:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23553148	23561529	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001639:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23561530	23561628	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001639;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001639;transcript_name=HG00642_ch_T0001639;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001639:4;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23518618	23561644	1000	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_G0000561;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=HG00642_ch_T0001640;Name=ENSG00000306918
HG00642_chrY	CAT	exon	23518618	23519014	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001640;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001640:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23519015	23549803	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001640;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001640:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23549804	23549911	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001640;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001640:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23549912	23561529	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001640;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001640:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23561530	23561644	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001640;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001640;transcript_name=HG00642_ch_T0001640;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001640:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23518618	23561626	1000	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_G0000561;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=HG00642_ch_T0001641;Name=ENSG00000306918
HG00642_chrY	CAT	exon	23518618	23519014	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001641:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23519015	23549803	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001641:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23549804	23549911	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001641:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23549912	23553058	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001641:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23553059	23553147	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001641:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23553148	23561529	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=intron:HG00642_ch_T0001641:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23561530	23561626	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00642_ch_T0001641;gene_id=HG00642_ch_G0000561;Parent=HG00642_ch_T0001641;transcript_name=HG00642_ch_T0001641;gene_name=ENSG00000306918;ID=exon:HG00642_ch_T0001641:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23552344	23559288	.	-	.	source_gene_common_name=RBMY2WP;source_gene=ENSG00000230727.1;gene_id=HG00642_ch_G0000562;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2WP;gene_sources=liftoff;ID=HG00642_ch_G0000562;Name=RBMY2WP
HG00642_chrY	CAT	transcript	23552344	23559288	1000	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_G0000562;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=HG00642_ch_T0001642;Name=RBMY2WP
HG00642_chrY	CAT	exon	23552344	23552645	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23552646	23553058	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=intron:HG00642_ch_T0001642:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23553059	23553147	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23553148	23553228	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=intron:HG00642_ch_T0001642:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23553229	23553339	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23553340	23556098	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=intron:HG00642_ch_T0001642:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23556099	23556275	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23556276	23558663	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=intron:HG00642_ch_T0001642:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23558664	23558765	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23558766	23559175	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=intron:HG00642_ch_T0001642:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23559176	23559288	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00642_ch_T0001642;gene_id=HG00642_ch_G0000562;Parent=HG00642_ch_T0001642;transcript_name=HG00642_ch_T0001642;gene_name=RBMY2WP;ID=exon:HG00642_ch_T0001642:5;Name=RBMY2WP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23606605	23611695	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=HG00642_ch_G0000563;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG00642_ch_G0000563;Name=ENSG00000308317
HG00642_chrY	CAT	transcript	23606605	23611695	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00642_ch_T0001643;gene_id=HG00642_ch_G0000563;Parent=HG00642_ch_G0000563;transcript_name=HG00642_ch_T0001643;gene_name=ENSG00000308317;ID=HG00642_ch_T0001643;Name=ENSG00000308317
HG00642_chrY	CAT	exon	23606605	23606946	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00642_ch_T0001643;gene_id=HG00642_ch_G0000563;Parent=HG00642_ch_T0001643;transcript_name=HG00642_ch_T0001643;gene_name=ENSG00000308317;ID=exon:HG00642_ch_T0001643:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23606947	23611598	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00642_ch_T0001643;gene_id=HG00642_ch_G0000563;Parent=HG00642_ch_T0001643;transcript_name=HG00642_ch_T0001643;gene_name=ENSG00000308317;ID=intron:HG00642_ch_T0001643:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23611599	23611695	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00642_ch_T0001643;gene_id=HG00642_ch_G0000563;Parent=HG00642_ch_T0001643;transcript_name=HG00642_ch_T0001643;gene_name=ENSG00000308317;ID=exon:HG00642_ch_T0001643:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23641086	23642217	.	+	.	source_gene_common_name=TTTY17A;source_gene=ENSG00000228240.1;alternative_source_transcripts=ENST00000416110.1;gene_id=HG00642_ch_G0000564;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG00642_ch_G0000564;Name=TTTY17A
HG00642_chrY	CAT	transcript	23641086	23642217	1000	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1;transcript_id=HG00642_ch_T0001644;gene_id=HG00642_ch_G0000564;Parent=HG00642_ch_G0000564;transcript_name=HG00642_ch_T0001644;gene_name=TTTY17A;ID=HG00642_ch_T0001644;Name=TTTY17A
HG00642_chrY	CAT	exon	23641086	23641145	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1;transcript_id=HG00642_ch_T0001644;gene_id=HG00642_ch_G0000564;Parent=HG00642_ch_T0001644;transcript_name=HG00642_ch_T0001644;gene_name=TTTY17A;ID=exon:HG00642_ch_T0001644:0;Name=TTTY17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23641146	23642111	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1;transcript_id=HG00642_ch_T0001644;gene_id=HG00642_ch_G0000564;Parent=HG00642_ch_T0001644;transcript_name=HG00642_ch_T0001644;gene_name=TTTY17A;ID=intron:HG00642_ch_T0001644:0;Name=TTTY17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23642112	23642217	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1;transcript_id=HG00642_ch_T0001644;gene_id=HG00642_ch_G0000564;Parent=HG00642_ch_T0001644;transcript_name=HG00642_ch_T0001644;gene_name=TTTY17A;ID=exon:HG00642_ch_T0001644:1;Name=TTTY17A;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23650463	23651337	.	-	.	source_gene_common_name=TRIM60P5Y;source_gene=ENSG00000224210.1;gene_id=HG00642_ch_G0000565;gene_biotype=processed_pseudogene;gene_name=TRIM60P5Y;gene_sources=liftoff;ID=HG00642_ch_G0000565;Name=TRIM60P5Y
HG00642_chrY	CAT	transcript	23650463	23651337	1000	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00642_ch_T0001645;gene_id=HG00642_ch_G0000565;Parent=HG00642_ch_G0000565;transcript_name=HG00642_ch_T0001645;gene_name=TRIM60P5Y;ID=HG00642_ch_T0001645;Name=TRIM60P5Y
HG00642_chrY	CAT	exon	23650463	23650760	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00642_ch_T0001645;gene_id=HG00642_ch_G0000565;Parent=HG00642_ch_T0001645;transcript_name=HG00642_ch_T0001645;gene_name=TRIM60P5Y;ID=exon:HG00642_ch_T0001645:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23650761	23651061	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00642_ch_T0001645;gene_id=HG00642_ch_G0000565;Parent=HG00642_ch_T0001645;transcript_name=HG00642_ch_T0001645;gene_name=TRIM60P5Y;ID=intron:HG00642_ch_T0001645:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23651062	23651337	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00642_ch_T0001645;gene_id=HG00642_ch_G0000565;Parent=HG00642_ch_T0001645;transcript_name=HG00642_ch_T0001645;gene_name=TRIM60P5Y;ID=exon:HG00642_ch_T0001645:1;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23656016	23657258	.	-	.	source_gene_common_name=ZNF736P12Y;source_gene=ENSG00000232003.2;gene_id=HG00642_ch_G0000566;gene_biotype=processed_pseudogene;gene_name=ZNF736P12Y;gene_sources=liftoff;ID=HG00642_ch_G0000566;Name=ZNF736P12Y
HG00642_chrY	CAT	transcript	23656016	23657258	1000	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;transcript_id=HG00642_ch_T0001646;gene_id=HG00642_ch_G0000566;Parent=HG00642_ch_G0000566;transcript_name=HG00642_ch_T0001646;gene_name=ZNF736P12Y;ID=HG00642_ch_T0001646;Name=ZNF736P12Y
HG00642_chrY	CAT	exon	23656016	23657258	.	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;transcript_id=HG00642_ch_T0001646;gene_id=HG00642_ch_G0000566;Parent=HG00642_ch_T0001646;transcript_name=HG00642_ch_T0001646;gene_name=ZNF736P12Y;ID=exon:HG00642_ch_T0001646:0;Name=ZNF736P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23725957	23762786	.	+	.	source_gene_common_name=TTTY4B;source_gene=ENSG00000235412.1;alternative_source_transcripts=ENST00000436568.1;gene_id=HG00642_ch_G0000567;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG00642_ch_G0000567;Name=TTTY4B
HG00642_chrY	CAT	transcript	23725957	23762786	1000	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_G0000567;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=HG00642_ch_T0001647;Name=TTTY4B
HG00642_chrY	CAT	exon	23725957	23726117	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=exon:HG00642_ch_T0001647:0;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23726118	23753129	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=intron:HG00642_ch_T0001647:0;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23753130	23753205	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=exon:HG00642_ch_T0001647:1;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23753206	23755009	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=intron:HG00642_ch_T0001647:1;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23755010	23755117	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=exon:HG00642_ch_T0001647:2;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23755118	23761785	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=intron:HG00642_ch_T0001647:2;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23761786	23762786	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG00642_ch_T0001647;gene_id=HG00642_ch_G0000567;Parent=HG00642_ch_T0001647;transcript_name=HG00642_ch_T0001647;gene_name=TTTY4B;ID=exon:HG00642_ch_T0001647:3;Name=TTTY4B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23763321	23794968	.	+	.	source_gene_common_name=BPY2B;source_gene=ENSG00000183795.8;gene_id=HG00642_ch_G0000568;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG00642_ch_G0000568;Name=BPY2B
HG00642_chrY	CAT	transcript	23763321	23781878	100	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_G0000568;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=HG00642_ch_T0001648;Name=BPY2B
HG00642_chrY	CAT	exon	23763321	23763476	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=exon:HG00642_ch_T0001648:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23763477	23773649	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=intron:HG00642_ch_T0001648:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23773650	23773718	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=exon:HG00642_ch_T0001648:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23773719	23774070	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=intron:HG00642_ch_T0001648:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23774071	23774193	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=exon:HG00642_ch_T0001648:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23774194	23777258	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=intron:HG00642_ch_T0001648:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23777259	23777395	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=exon:HG00642_ch_T0001648:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23777396	23781804	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=intron:HG00642_ch_T0001648:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23781805	23781878	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=exon:HG00642_ch_T0001648:4;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23781846	23781878	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001648:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	23781846	23781848	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=start_codon:HG00642_ch_T0001648;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	23781876	23781878	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001648;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001648;transcript_name=HG00642_ch_T0001648;gene_name=BPY2B;ID=stop_codon:HG00642_ch_T0001648;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23773765	23794968	100	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_G0000568;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=HG00642_ch_T0001649;Name=BPY2B
HG00642_chrY	CAT	exon	23773765	23773795	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23773796	23774070	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23774071	23774193	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23774194	23777258	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23777259	23777395	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23777396	23781804	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23781805	23781923	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23781846	23781923	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001649:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	23781846	23781848	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=start_codon:HG00642_ch_T0001649;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23781924	23783982	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23783983	23784100	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:4;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23783983	23784100	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001649:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23784101	23786954	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:4;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23786955	23787060	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:5;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23786955	23787060	.	+	2	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001649:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23787061	23787752	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:5;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23787753	23787877	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:6;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23787753	23787771	.	+	1	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001649:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	23787769	23787771	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=stop_codon:HG00642_ch_T0001649;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23787878	23794427	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:6;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23794428	23794552	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:7;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23794553	23794646	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=intron:HG00642_ch_T0001649:7;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23794647	23794968	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001649;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001649;transcript_name=HG00642_ch_T0001649;gene_name=BPY2B;ID=exon:HG00642_ch_T0001649:8;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23773789	23794909	1000	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_G0000568;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=HG00642_ch_T0001650;Name=BPY2B
HG00642_chrY	CAT	exon	23773789	23773795	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23773796	23774070	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23774071	23774193	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23774194	23777258	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23777259	23777395	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23777396	23781804	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23781805	23781923	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23781924	23786954	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23786955	23787060	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:4;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23787061	23787752	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:4;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23787753	23787877	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:5;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23787878	23794427	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:5;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23794428	23794557	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:6;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23794558	23794646	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=intron:HG00642_ch_T0001650:6;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23794647	23794909	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001650;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001650;transcript_name=HG00642_ch_T0001650;gene_name=BPY2B;ID=exon:HG00642_ch_T0001650:7;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	23781846	23787771	100	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_G0000568;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=HG00642_ch_T0001651;Name=BPY2B
HG00642_chrY	CAT	exon	23781846	23781923	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=exon:HG00642_ch_T0001651:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23781846	23781923	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001651:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	23781846	23781848	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=start_codon:HG00642_ch_T0001651;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23781924	23783982	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=intron:HG00642_ch_T0001651:0;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23783983	23784100	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=exon:HG00642_ch_T0001651:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23783983	23784100	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001651:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23784101	23786954	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=intron:HG00642_ch_T0001651:1;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23786955	23787060	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=exon:HG00642_ch_T0001651:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23786955	23787060	.	+	2	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001651:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23787061	23787752	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=intron:HG00642_ch_T0001651:2;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23787753	23787771	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=exon:HG00642_ch_T0001651:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	23787753	23787771	.	+	1	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=CDS:HG00642_ch_T0001651:3;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	23787769	23787771	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;transcript_id=HG00642_ch_T0001651;gene_id=HG00642_ch_G0000568;Parent=HG00642_ch_T0001651;transcript_name=HG00642_ch_T0001651;gene_name=BPY2B;ID=stop_codon:HG00642_ch_T0001651;Name=BPY2B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23806566	23807324	.	+	.	source_gene_common_name=ENSG00000244000;source_gene=ENSG00000244000.1;gene_id=HG00642_ch_G0000569;gene_biotype=processed_pseudogene;gene_name=ENSG00000244000;gene_sources=liftoff;ID=HG00642_ch_G0000569;Name=ENSG00000244000
HG00642_chrY	CAT	transcript	23806566	23807324	1000	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG00642_ch_T0001652;gene_id=HG00642_ch_G0000569;Parent=HG00642_ch_G0000569;transcript_name=HG00642_ch_T0001652;gene_name=ENSG00000244000;ID=HG00642_ch_T0001652;Name=ENSG00000244000
HG00642_chrY	CAT	exon	23806566	23807324	.	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG00642_ch_T0001652;gene_id=HG00642_ch_G0000569;Parent=HG00642_ch_T0001652;transcript_name=HG00642_ch_T0001652;gene_name=ENSG00000244000;ID=exon:HG00642_ch_T0001652:0;Name=ENSG00000244000;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23815097	23816166	.	+	.	source_gene_common_name=TRIM60P8Y;source_gene=ENSG00000232764.1;gene_id=HG00642_ch_G0000570;gene_biotype=processed_pseudogene;gene_name=TRIM60P8Y;gene_sources=liftoff;ID=HG00642_ch_G0000570;Name=TRIM60P8Y
HG00642_chrY	CAT	transcript	23815097	23816166	1000	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00642_ch_T0001653;gene_id=HG00642_ch_G0000570;Parent=HG00642_ch_G0000570;transcript_name=HG00642_ch_T0001653;gene_name=TRIM60P8Y;ID=HG00642_ch_T0001653;Name=TRIM60P8Y
HG00642_chrY	CAT	exon	23815097	23815347	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00642_ch_T0001653;gene_id=HG00642_ch_G0000570;Parent=HG00642_ch_T0001653;transcript_name=HG00642_ch_T0001653;gene_name=TRIM60P8Y;ID=exon:HG00642_ch_T0001653:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23815348	23815655	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00642_ch_T0001653;gene_id=HG00642_ch_G0000570;Parent=HG00642_ch_T0001653;transcript_name=HG00642_ch_T0001653;gene_name=TRIM60P8Y;ID=intron:HG00642_ch_T0001653:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23815656	23816166	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00642_ch_T0001653;gene_id=HG00642_ch_G0000570;Parent=HG00642_ch_T0001653;transcript_name=HG00642_ch_T0001653;gene_name=TRIM60P8Y;ID=exon:HG00642_ch_T0001653:1;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23838750	23840698	.	+	.	source_gene_common_name=ZNF736P3Y;source_gene=ENSG00000233126.3;alternative_source_transcripts=ENST00000428264.1;gene_id=HG00642_ch_G0000571;gene_biotype=processed_pseudogene;gene_name=ZNF736P3Y;gene_sources=liftoff;ID=HG00642_ch_G0000571;Name=ZNF736P3Y
HG00642_chrY	CAT	transcript	23838750	23840698	1000	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_G0000571;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=HG00642_ch_T0001654;Name=ZNF736P3Y
HG00642_chrY	CAT	exon	23838750	23838863	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_T0001654;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=exon:HG00642_ch_T0001654:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23838864	23839182	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_T0001654;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=intron:HG00642_ch_T0001654:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23839183	23839239	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_T0001654;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=exon:HG00642_ch_T0001654:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23839240	23839404	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_T0001654;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=intron:HG00642_ch_T0001654:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23839405	23840698	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1;transcript_id=HG00642_ch_T0001654;gene_id=HG00642_ch_G0000571;Parent=HG00642_ch_T0001654;transcript_name=HG00642_ch_T0001654;gene_name=ZNF736P3Y;ID=exon:HG00642_ch_T0001654:2;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	23847546	23848702	.	+	.	source_gene_common_name=TRIM60P9Y;source_gene=ENSG00000227251.1;gene_id=HG00642_ch_G0000572;gene_biotype=processed_pseudogene;gene_name=TRIM60P9Y;gene_sources=liftoff;ID=HG00642_ch_G0000572;Name=TRIM60P9Y
HG00642_chrY	CAT	transcript	23847546	23848702	1000	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00642_ch_T0001655;gene_id=HG00642_ch_G0000572;Parent=HG00642_ch_G0000572;transcript_name=HG00642_ch_T0001655;gene_name=TRIM60P9Y;ID=HG00642_ch_T0001655;Name=TRIM60P9Y
HG00642_chrY	CAT	exon	23847546	23847845	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00642_ch_T0001655;gene_id=HG00642_ch_G0000572;Parent=HG00642_ch_T0001655;transcript_name=HG00642_ch_T0001655;gene_name=TRIM60P9Y;ID=exon:HG00642_ch_T0001655:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	23847846	23848186	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00642_ch_T0001655;gene_id=HG00642_ch_G0000572;Parent=HG00642_ch_T0001655;transcript_name=HG00642_ch_T0001655;gene_name=TRIM60P9Y;ID=intron:HG00642_ch_T0001655:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	23848187	23848702	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00642_ch_T0001655;gene_id=HG00642_ch_G0000572;Parent=HG00642_ch_T0001655;transcript_name=HG00642_ch_T0001655;gene_name=TRIM60P9Y;ID=exon:HG00642_ch_T0001655:1;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24014756	24069961	.	+	.	source_gene_common_name=DAZ3;source_gene=ENSG00000187191.16;alternative_source_transcripts=ENST00000446723.4;gene_id=HG00642_ch_G0000573;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG00642_ch_G0000573;Name=DAZ3
HG00642_chrY	CAT	transcript	24014756	24069961	100	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_G0000573;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=HG00642_ch_T0001656;Name=DAZ3
HG00642_chrY	CAT	exon	24014756	24015065	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24015063	24015065	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24015063	24015065	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=start_codon:HG00642_ch_T0001656;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24015066	24021666	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24021667	24021813	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24021667	24021813	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24021814	24022087	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022088	24022179	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022088	24022179	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022180	24022739	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022740	24022791	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022740	24022791	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022792	24023227	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023228	24023291	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023228	24023291	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023292	24023380	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023381	24023520	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023381	24023520	.	+	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023521	24024920	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24024921	24024992	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24024921	24024992	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24024993	24027363	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24027364	24027435	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24027364	24027435	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24027436	24029753	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24029754	24029825	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24029754	24029825	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24029826	24036929	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24036930	24037001	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24036930	24037001	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24037002	24039306	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24039307	24039378	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24039307	24039378	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24039379	24041686	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24041687	24041758	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24041687	24041758	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24041759	24044063	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24044064	24044135	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24044064	24044135	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24044136	24058607	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24058608	24058679	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24058608	24058679	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24058680	24059424	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24059425	24059459	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24059425	24059459	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24059460	24064031	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24064032	24064130	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24064032	24064095	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001656:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24064093	24064095	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=stop_codon:HG00642_ch_T0001656;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24064131	24068104	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=intron:HG00642_ch_T0001656:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24068105	24069961	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=HG00642_ch_T0001656;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001656;transcript_name=HG00642_ch_T0001656;gene_name=DAZ3;ID=exon:HG00642_ch_T0001656:16;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24014779	24069961	100	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_G0000573;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=HG00642_ch_T0001657;Name=DAZ3
HG00642_chrY	CAT	exon	24014779	24015065	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24015063	24015065	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24015063	24015065	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=start_codon:HG00642_ch_T0001657;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24015066	24021666	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24021667	24021813	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24021667	24021813	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24021814	24022087	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022088	24022179	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022088	24022179	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022180	24022739	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022740	24022791	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022740	24022791	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022792	24023227	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023228	24023291	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023228	24023291	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023292	24023380	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023381	24023520	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023381	24023520	.	+	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023521	24024920	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24024921	24024992	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24024921	24024992	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24024993	24027363	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24027364	24027435	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24027364	24027435	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24027436	24029753	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24029754	24029825	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24029754	24029825	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24029826	24039306	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24039307	24039378	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24039307	24039378	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24039379	24044063	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24044064	24044135	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24044064	24044135	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24044136	24048820	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24048821	24048892	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24048821	24048892	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24048893	24058607	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24058608	24058679	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24058608	24058679	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24058680	24059424	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24059425	24059459	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24059425	24059459	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24059460	24064031	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24064032	24064130	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24064032	24064095	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001657:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24064093	24064095	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=stop_codon:HG00642_ch_T0001657;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24064131	24068104	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=intron:HG00642_ch_T0001657:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24068105	24069961	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=HG00642_ch_T0001657;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001657;transcript_name=HG00642_ch_T0001657;gene_name=DAZ3;ID=exon:HG00642_ch_T0001657:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24014855	24069961	100	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_G0000573;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=HG00642_ch_T0001658;Name=DAZ3
HG00642_chrY	CAT	exon	24014855	24015065	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24015063	24015065	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24015063	24015065	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=start_codon:HG00642_ch_T0001658;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24015066	24021666	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24021667	24021813	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24021667	24021813	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24021814	24022087	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022088	24022179	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022088	24022179	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022180	24022739	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24022740	24022791	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24022740	24022791	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24022792	24023227	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023228	24023291	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023228	24023291	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023292	24023380	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24023381	24023520	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24023381	24023520	.	+	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24023521	24024920	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:5;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24024921	24024992	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24024921	24024992	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24024993	24027363	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:6;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24027364	24027435	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24027364	24027435	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24027436	24029753	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:7;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24029754	24029825	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24029754	24029825	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24029826	24036929	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:8;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24036930	24037001	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24036930	24037001	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24037002	24039306	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:9;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24039307	24039378	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24039307	24039378	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24039379	24041686	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:10;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24041687	24041758	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24041687	24041758	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24041759	24044063	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:11;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24044064	24044135	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24044064	24044135	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24044136	24046443	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:12;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24046444	24046515	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24046444	24046515	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24046516	24048820	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:13;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24048821	24048892	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24048821	24048892	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24048893	24058607	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:14;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24058608	24058679	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24058608	24058679	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24058680	24059424	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:15;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24059425	24059459	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:16;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24059425	24059459	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:16;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24059460	24064031	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:16;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24064032	24064130	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:17;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24064032	24064095	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=CDS:HG00642_ch_T0001658:17;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24064093	24064095	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=stop_codon:HG00642_ch_T0001658;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24064131	24068104	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=intron:HG00642_ch_T0001658:17;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24068105	24069961	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=HG00642_ch_T0001658;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001658;transcript_name=HG00642_ch_T0001658;gene_name=DAZ3;ID=exon:HG00642_ch_T0001658:18;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24058481	24069273	1000	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_G0000573;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=HG00642_ch_T0001659;Name=DAZ3
HG00642_chrY	CAT	exon	24058481	24058679	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=exon:HG00642_ch_T0001659:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24058680	24059424	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=intron:HG00642_ch_T0001659:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24059425	24059459	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=exon:HG00642_ch_T0001659:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24059460	24064031	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=intron:HG00642_ch_T0001659:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24064032	24064130	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=exon:HG00642_ch_T0001659:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24064131	24068104	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=intron:HG00642_ch_T0001659:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24068105	24069273	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=HG00642_ch_T0001659;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001659;transcript_name=HG00642_ch_T0001659;gene_name=DAZ3;ID=exon:HG00642_ch_T0001659:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24058493	24069953	1000	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_G0000573;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=HG00642_ch_T0001660;Name=DAZ3
HG00642_chrY	CAT	exon	24058493	24058679	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=exon:HG00642_ch_T0001660:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24058680	24059424	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=intron:HG00642_ch_T0001660:0;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24059425	24059459	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=exon:HG00642_ch_T0001660:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24059460	24061024	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=intron:HG00642_ch_T0001660:1;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24061025	24061096	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=exon:HG00642_ch_T0001660:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24061097	24064031	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=intron:HG00642_ch_T0001660:2;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24064032	24064130	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=exon:HG00642_ch_T0001660:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24064131	24068104	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=intron:HG00642_ch_T0001660:3;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24068105	24069953	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=HG00642_ch_T0001660;gene_id=HG00642_ch_G0000573;Parent=HG00642_ch_T0001660;transcript_name=HG00642_ch_T0001660;gene_name=DAZ3;ID=exon:HG00642_ch_T0001660:4;Name=DAZ3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24140094	24141235	.	-	.	source_gene_common_name=TRIM60P11Y;source_gene=ENSG00000227837.1;alternative_source_transcripts=ENST00000445313.1;gene_id=HG00642_ch_G0000574;gene_biotype=processed_pseudogene;gene_name=TRIM60P11Y;gene_sources=liftoff;ID=HG00642_ch_G0000574;Name=TRIM60P11Y
HG00642_chrY	CAT	transcript	24140094	24141235	1000	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;alternative_source_transcripts=ENST00000445313.1;transcript_id=HG00642_ch_T0001661;gene_id=HG00642_ch_G0000574;Parent=HG00642_ch_G0000574;transcript_name=HG00642_ch_T0001661;gene_name=TRIM60P11Y;ID=HG00642_ch_T0001661;Name=TRIM60P11Y
HG00642_chrY	CAT	exon	24140094	24140609	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;alternative_source_transcripts=ENST00000445313.1;transcript_id=HG00642_ch_T0001661;gene_id=HG00642_ch_G0000574;Parent=HG00642_ch_T0001661;transcript_name=HG00642_ch_T0001661;gene_name=TRIM60P11Y;ID=exon:HG00642_ch_T0001661:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24140610	24140950	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;alternative_source_transcripts=ENST00000445313.1;transcript_id=HG00642_ch_T0001661;gene_id=HG00642_ch_G0000574;Parent=HG00642_ch_T0001661;transcript_name=HG00642_ch_T0001661;gene_name=TRIM60P11Y;ID=intron:HG00642_ch_T0001661:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24140951	24141235	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;alternative_source_transcripts=ENST00000445313.1;transcript_id=HG00642_ch_T0001661;gene_id=HG00642_ch_G0000574;Parent=HG00642_ch_T0001661;transcript_name=HG00642_ch_T0001661;gene_name=TRIM60P11Y;ID=exon:HG00642_ch_T0001661:1;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24148091	24149369	.	-	.	source_gene_common_name=ZNF736P2Y;source_gene=ENSG00000226270.3;alternative_source_transcripts=ENST00000416040.1;gene_id=HG00642_ch_G0000575;gene_biotype=processed_pseudogene;gene_name=ZNF736P2Y;gene_sources=liftoff;ID=HG00642_ch_G0000575;Name=ZNF736P2Y
HG00642_chrY	CAT	transcript	24148091	24149369	1000	-	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;alternative_source_transcripts=ENST00000416040.1;transcript_id=HG00642_ch_T0001662;gene_id=HG00642_ch_G0000575;Parent=HG00642_ch_G0000575;transcript_name=HG00642_ch_T0001662;gene_name=ZNF736P2Y;ID=HG00642_ch_T0001662;Name=ZNF736P2Y
HG00642_chrY	CAT	exon	24148091	24149369	.	-	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;alternative_source_transcripts=ENST00000416040.1;transcript_id=HG00642_ch_T0001662;gene_id=HG00642_ch_G0000575;Parent=HG00642_ch_T0001662;transcript_name=HG00642_ch_T0001662;gene_name=ZNF736P2Y;ID=exon:HG00642_ch_T0001662:0;Name=ZNF736P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24172621	24173690	.	-	.	source_gene_common_name=TRIM60P10Y;source_gene=ENSG00000232976.1;alternative_source_transcripts=ENST00000425589.1;gene_id=HG00642_ch_G0000576;gene_biotype=processed_pseudogene;gene_name=TRIM60P10Y;gene_sources=liftoff;ID=HG00642_ch_G0000576;Name=TRIM60P10Y
HG00642_chrY	CAT	transcript	24172621	24173690	1000	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;alternative_source_transcripts=ENST00000425589.1;transcript_id=HG00642_ch_T0001663;gene_id=HG00642_ch_G0000576;Parent=HG00642_ch_G0000576;transcript_name=HG00642_ch_T0001663;gene_name=TRIM60P10Y;ID=HG00642_ch_T0001663;Name=TRIM60P10Y
HG00642_chrY	CAT	exon	24172621	24173140	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;alternative_source_transcripts=ENST00000425589.1;transcript_id=HG00642_ch_T0001663;gene_id=HG00642_ch_G0000576;Parent=HG00642_ch_T0001663;transcript_name=HG00642_ch_T0001663;gene_name=TRIM60P10Y;ID=exon:HG00642_ch_T0001663:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24173141	24173459	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;alternative_source_transcripts=ENST00000425589.1;transcript_id=HG00642_ch_T0001663;gene_id=HG00642_ch_G0000576;Parent=HG00642_ch_T0001663;transcript_name=HG00642_ch_T0001663;gene_name=TRIM60P10Y;ID=intron:HG00642_ch_T0001663:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24173460	24173690	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;alternative_source_transcripts=ENST00000425589.1;transcript_id=HG00642_ch_T0001663;gene_id=HG00642_ch_G0000576;Parent=HG00642_ch_T0001663;transcript_name=HG00642_ch_T0001663;gene_name=TRIM60P10Y;ID=exon:HG00642_ch_T0001663:1;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24181494	24182220	.	-	.	source_gene_common_name=ENSG00000240566;source_gene=ENSG00000240566.1;alternative_source_transcripts=ENST00000432862.1;gene_id=HG00642_ch_G0000577;gene_biotype=processed_pseudogene;gene_name=ENSG00000240566;gene_sources=liftoff;ID=HG00642_ch_G0000577;Name=ENSG00000240566
HG00642_chrY	CAT	transcript	24181494	24182220	1000	-	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;alternative_source_transcripts=ENST00000432862.1;transcript_id=HG00642_ch_T0001664;gene_id=HG00642_ch_G0000577;Parent=HG00642_ch_G0000577;transcript_name=HG00642_ch_T0001664;gene_name=ENSG00000240566;ID=HG00642_ch_T0001664;Name=ENSG00000240566
HG00642_chrY	CAT	exon	24181494	24182220	.	-	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;alternative_source_transcripts=ENST00000432862.1;transcript_id=HG00642_ch_T0001664;gene_id=HG00642_ch_G0000577;Parent=HG00642_ch_T0001664;transcript_name=HG00642_ch_T0001664;gene_name=ENSG00000240566;ID=exon:HG00642_ch_T0001664:0;Name=ENSG00000240566;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24193821	24225468	.	-	.	source_gene_common_name=BPY2;source_gene=ENSG00000183753.10;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;gene_id=HG00642_ch_G0000578;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG00642_ch_G0000578;Name=BPY2
HG00642_chrY	CAT	transcript	24193821	24215024	100	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_G0000578;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=HG00642_ch_T0001665;Name=BPY2
HG00642_chrY	CAT	exon	24193821	24194142	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24194143	24194236	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24194237	24194361	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24194362	24200911	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24200912	24201036	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24201018	24201036	.	-	1	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=CDS:HG00642_ch_T0001665:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24201018	24201020	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=stop_codon:HG00642_ch_T0001665;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201037	24201728	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24201729	24201834	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24201729	24201834	.	-	2	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=CDS:HG00642_ch_T0001665:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201835	24204688	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24204689	24204806	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:4;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24204689	24204806	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=CDS:HG00642_ch_T0001665:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24204807	24206865	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:4;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24206866	24206984	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:5;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24206866	24206943	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=CDS:HG00642_ch_T0001665:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24206941	24206943	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=start_codon:HG00642_ch_T0001665;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24206985	24211393	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:5;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24211394	24211530	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:6;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24211531	24214595	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:6;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24214596	24214718	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:7;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24214719	24214993	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=intron:HG00642_ch_T0001665:7;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24214994	24215024	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG00642_ch_T0001665;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001665;transcript_name=HG00642_ch_T0001665;gene_name=BPY2;ID=exon:HG00642_ch_T0001665:8;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24193880	24215000	1000	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_G0000578;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=HG00642_ch_T0001666;Name=BPY2
HG00642_chrY	CAT	exon	24193880	24194142	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24194143	24194231	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24194232	24194361	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24194362	24200911	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24200912	24201036	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201037	24201728	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24201729	24201834	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201835	24206865	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24206866	24206984	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:4;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24206985	24211393	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:4;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24211394	24211530	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:5;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24211531	24214595	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:5;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24214596	24214718	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:6;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24214719	24214993	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=intron:HG00642_ch_T0001666:6;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24214994	24215000	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG00642_ch_T0001666;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001666;transcript_name=HG00642_ch_T0001666;gene_name=BPY2;ID=exon:HG00642_ch_T0001666:7;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24201018	24206943	100	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_G0000578;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=HG00642_ch_T0001667;Name=BPY2
HG00642_chrY	CAT	exon	24201018	24201036	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=exon:HG00642_ch_T0001667:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24201018	24201036	.	-	1	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=CDS:HG00642_ch_T0001667:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24201018	24201020	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=stop_codon:HG00642_ch_T0001667;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201037	24201728	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=intron:HG00642_ch_T0001667:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24201729	24201834	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=exon:HG00642_ch_T0001667:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24201729	24201834	.	-	2	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=CDS:HG00642_ch_T0001667:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24201835	24204688	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=intron:HG00642_ch_T0001667:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24204689	24204806	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=exon:HG00642_ch_T0001667:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24204689	24204806	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=CDS:HG00642_ch_T0001667:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24204807	24206865	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=intron:HG00642_ch_T0001667:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24206866	24206943	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=exon:HG00642_ch_T0001667:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24206866	24206943	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=CDS:HG00642_ch_T0001667:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24206941	24206943	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG00642_ch_T0001667;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001667;transcript_name=HG00642_ch_T0001667;gene_name=BPY2;ID=start_codon:HG00642_ch_T0001667;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24206911	24225468	100	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_G0000578;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=HG00642_ch_T0001668;Name=BPY2
HG00642_chrY	CAT	exon	24206911	24206984	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=exon:HG00642_ch_T0001668:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24206911	24206943	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=CDS:HG00642_ch_T0001668:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24206941	24206943	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=start_codon:HG00642_ch_T0001668;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24206985	24211393	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=intron:HG00642_ch_T0001668:0;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24211394	24211530	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=exon:HG00642_ch_T0001668:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24211531	24214595	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=intron:HG00642_ch_T0001668:1;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24214596	24214718	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=exon:HG00642_ch_T0001668:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24214719	24215070	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=intron:HG00642_ch_T0001668:2;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24215071	24215139	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=exon:HG00642_ch_T0001668:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24215140	24225312	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=intron:HG00642_ch_T0001668:3;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24225313	24225468	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG00642_ch_T0001668;gene_id=HG00642_ch_G0000578;Parent=HG00642_ch_T0001668;transcript_name=HG00642_ch_T0001668;gene_name=BPY2;ID=exon:HG00642_ch_T0001668:4;Name=BPY2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24226003	24262822	.	-	.	source_gene_common_name=TTTY4;source_gene=ENSG00000226906.1;alternative_source_transcripts=ENST00000420149.1;gene_id=HG00642_ch_G0000579;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG00642_ch_G0000579;Name=TTTY4
HG00642_chrY	CAT	transcript	24226003	24262822	1000	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_G0000579;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=HG00642_ch_T0001669;Name=TTTY4
HG00642_chrY	CAT	exon	24226003	24227003	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=exon:HG00642_ch_T0001669:0;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24227004	24233671	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=intron:HG00642_ch_T0001669:0;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24233672	24233779	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=exon:HG00642_ch_T0001669:1;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24233780	24235583	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=intron:HG00642_ch_T0001669:1;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24235584	24235659	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=exon:HG00642_ch_T0001669:2;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24235660	24262661	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=intron:HG00642_ch_T0001669:2;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24262662	24262822	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00642_ch_T0001669;gene_id=HG00642_ch_G0000579;Parent=HG00642_ch_T0001669;transcript_name=HG00642_ch_T0001669;gene_name=TTTY4;ID=exon:HG00642_ch_T0001669:3;Name=TTTY4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24331522	24332734	.	+	.	source_gene_common_name=ZNF736P11Y;source_gene=ENSG00000215537.3;alternative_source_transcripts=ENST00000442535.1;gene_id=HG00642_ch_G0000580;gene_biotype=processed_pseudogene;gene_name=ZNF736P11Y;gene_sources=liftoff;ID=HG00642_ch_G0000580;Name=ZNF736P11Y
HG00642_chrY	CAT	transcript	24331522	24332734	1000	+	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1;transcript_id=HG00642_ch_T0001670;gene_id=HG00642_ch_G0000580;Parent=HG00642_ch_G0000580;transcript_name=HG00642_ch_T0001670;gene_name=ZNF736P11Y;ID=HG00642_ch_T0001670;Name=ZNF736P11Y
HG00642_chrY	CAT	exon	24331522	24332734	.	+	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1;transcript_id=HG00642_ch_T0001670;gene_id=HG00642_ch_G0000580;Parent=HG00642_ch_T0001670;transcript_name=HG00642_ch_T0001670;gene_name=ZNF736P11Y;ID=exon:HG00642_ch_T0001670:0;Name=ZNF736P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24337445	24338167	.	+	.	source_gene_common_name=ENSG00000276829;source_gene=ENSG00000276829.1;alternative_source_transcripts=ENST00000613297.1;gene_id=HG00642_ch_G0000581;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000276829;gene_sources=liftoff;ID=HG00642_ch_G0000581;Name=ENSG00000276829
HG00642_chrY	CAT	transcript	24337445	24338167	1000	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG00642_ch_T0001671;gene_id=HG00642_ch_G0000581;Parent=HG00642_ch_G0000581;transcript_name=HG00642_ch_T0001671;gene_name=ENSG00000276829;ID=HG00642_ch_T0001671;Name=ENSG00000276829
HG00642_chrY	CAT	exon	24337445	24337735	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG00642_ch_T0001671;gene_id=HG00642_ch_G0000581;Parent=HG00642_ch_T0001671;transcript_name=HG00642_ch_T0001671;gene_name=ENSG00000276829;ID=exon:HG00642_ch_T0001671:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24337736	24338006	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG00642_ch_T0001671;gene_id=HG00642_ch_G0000581;Parent=HG00642_ch_T0001671;transcript_name=HG00642_ch_T0001671;gene_name=ENSG00000276829;ID=intron:HG00642_ch_T0001671:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24338007	24338167	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG00642_ch_T0001671;gene_id=HG00642_ch_G0000581;Parent=HG00642_ch_T0001671;transcript_name=HG00642_ch_T0001671;gene_name=ENSG00000276829;ID=exon:HG00642_ch_T0001671:1;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24346565	24347696	.	-	.	source_gene_common_name=TTTY17B;source_gene=ENSG00000227439.1;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;gene_id=HG00642_ch_G0000582;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG00642_ch_G0000582;Name=TTTY17B
HG00642_chrY	CAT	transcript	24346565	24347696	1000	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG00642_ch_T0001672;gene_id=HG00642_ch_G0000582;Parent=HG00642_ch_G0000582;transcript_name=HG00642_ch_T0001672;gene_name=TTTY17B;ID=HG00642_ch_T0001672;Name=TTTY17B
HG00642_chrY	CAT	exon	24346565	24346670	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG00642_ch_T0001672;gene_id=HG00642_ch_G0000582;Parent=HG00642_ch_T0001672;transcript_name=HG00642_ch_T0001672;gene_name=TTTY17B;ID=exon:HG00642_ch_T0001672:0;Name=TTTY17B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24346671	24347636	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG00642_ch_T0001672;gene_id=HG00642_ch_G0000582;Parent=HG00642_ch_T0001672;transcript_name=HG00642_ch_T0001672;gene_name=TTTY17B;ID=intron:HG00642_ch_T0001672:0;Name=TTTY17B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24347637	24347696	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG00642_ch_T0001672;gene_id=HG00642_ch_G0000582;Parent=HG00642_ch_T0001672;transcript_name=HG00642_ch_T0001672;gene_name=TTTY17B;ID=exon:HG00642_ch_T0001672:1;Name=TTTY17B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24377087	24382177	.	+	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;alternative_source_transcripts=ENST00000833217.1;gene_id=HG00642_ch_G0000583;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG00642_ch_G0000583;Name=ENSG00000308317
HG00642_chrY	CAT	transcript	24377087	24382177	1000	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00642_ch_T0001673;gene_id=HG00642_ch_G0000583;Parent=HG00642_ch_G0000583;transcript_name=HG00642_ch_T0001673;gene_name=ENSG00000308317;ID=HG00642_ch_T0001673;Name=ENSG00000308317
HG00642_chrY	CAT	exon	24377087	24377183	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00642_ch_T0001673;gene_id=HG00642_ch_G0000583;Parent=HG00642_ch_T0001673;transcript_name=HG00642_ch_T0001673;gene_name=ENSG00000308317;ID=exon:HG00642_ch_T0001673:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24377184	24381835	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00642_ch_T0001673;gene_id=HG00642_ch_G0000583;Parent=HG00642_ch_T0001673;transcript_name=HG00642_ch_T0001673;gene_name=ENSG00000308317;ID=intron:HG00642_ch_T0001673:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24381836	24382177	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00642_ch_T0001673;gene_id=HG00642_ch_G0000583;Parent=HG00642_ch_T0001673;transcript_name=HG00642_ch_T0001673;gene_name=ENSG00000308317;ID=exon:HG00642_ch_T0001673:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24429500	24436422	.	+	.	source_gene_common_name=RBMY2XP;source_gene=ENSG00000234399.1;alternative_source_transcripts=ENST00000447471.1;gene_id=HG00642_ch_G0000584;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2XP;gene_sources=liftoff;ID=HG00642_ch_G0000584;Name=RBMY2XP
HG00642_chrY	CAT	transcript	24429500	24436422	1000	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_G0000584;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=HG00642_ch_T0001674;Name=RBMY2XP
HG00642_chrY	CAT	exon	24429500	24429608	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:0;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24429609	24430016	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=intron:HG00642_ch_T0001674:0;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24430017	24430118	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:1;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24430119	24432506	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=intron:HG00642_ch_T0001674:1;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24432507	24432688	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:2;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24432689	24435426	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=intron:HG00642_ch_T0001674:2;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24435427	24435537	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:3;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24435538	24435618	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=intron:HG00642_ch_T0001674:3;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24435619	24435707	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:4;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24435708	24436120	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=intron:HG00642_ch_T0001674:4;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24436121	24436422	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG00642_ch_T0001674;gene_id=HG00642_ch_G0000584;Parent=HG00642_ch_T0001674;transcript_name=HG00642_ch_T0001674;gene_name=RBMY2XP;ID=exon:HG00642_ch_T0001674:5;Name=RBMY2XP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24470635	24470709	.	+	.	source_gene_common_name=ENSG00000279274;source_gene=ENSG00000279274.2;alternative_source_transcripts=ENST00000624575.2;gene_id=HG00642_ch_G0000585;gene_biotype=processed_pseudogene;gene_name=ENSG00000279274;gene_sources=liftoff;ID=HG00642_ch_G0000585;Name=ENSG00000279274
HG00642_chrY	CAT	transcript	24470635	24470709	1000	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG00642_ch_T0001675;gene_id=HG00642_ch_G0000585;Parent=HG00642_ch_G0000585;transcript_name=HG00642_ch_T0001675;gene_name=ENSG00000279274;ID=HG00642_ch_T0001675;Name=ENSG00000279274
HG00642_chrY	CAT	exon	24470635	24470709	.	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG00642_ch_T0001675;gene_id=HG00642_ch_G0000585;Parent=HG00642_ch_T0001675;transcript_name=HG00642_ch_T0001675;gene_name=ENSG00000279274;ID=exon:HG00642_ch_T0001675:0;Name=ENSG00000279274;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24511411	24520492	.	+	.	source_gene_common_name=ENSG00000306111;source_gene=ENSG00000306111.1;alternative_source_transcripts=ENST00000815376.1;gene_id=HG00642_ch_G0000586;gene_biotype=lncRNA;gene_name=ENSG00000306111;gene_sources=liftoff;ID=HG00642_ch_G0000586;Name=ENSG00000306111
HG00642_chrY	CAT	transcript	24511411	24520492	1000	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG00642_ch_T0001676;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_G0000586;transcript_name=HG00642_ch_T0001676;gene_name=ENSG00000306111;ID=HG00642_ch_T0001676;Name=ENSG00000306111
HG00642_chrY	CAT	exon	24511411	24511584	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG00642_ch_T0001676;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001676;transcript_name=HG00642_ch_T0001676;gene_name=ENSG00000306111;ID=exon:HG00642_ch_T0001676:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24511585	24519399	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG00642_ch_T0001676;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001676;transcript_name=HG00642_ch_T0001676;gene_name=ENSG00000306111;ID=intron:HG00642_ch_T0001676:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24519400	24520492	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG00642_ch_T0001676;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001676;transcript_name=HG00642_ch_T0001676;gene_name=ENSG00000306111;ID=exon:HG00642_ch_T0001676:1;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24511488	24512268	1000	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG00642_ch_T0001677;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_G0000586;transcript_name=HG00642_ch_T0001677;gene_name=ENSG00000306111;ID=HG00642_ch_T0001677;Name=ENSG00000306111
HG00642_chrY	CAT	exon	24511488	24511584	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG00642_ch_T0001677;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001677;transcript_name=HG00642_ch_T0001677;gene_name=ENSG00000306111;ID=exon:HG00642_ch_T0001677:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24511585	24512028	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG00642_ch_T0001677;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001677;transcript_name=HG00642_ch_T0001677;gene_name=ENSG00000306111;ID=intron:HG00642_ch_T0001677:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24512029	24512268	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG00642_ch_T0001677;gene_id=HG00642_ch_G0000586;Parent=HG00642_ch_T0001677;transcript_name=HG00642_ch_T0001677;gene_name=ENSG00000306111;ID=exon:HG00642_ch_T0001677:1;Name=ENSG00000306111;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24540473	24557642	.	-	.	source_gene_common_name=ENSG00000293927;source_gene=ENSG00000293927.1;gene_id=HG00642_ch_G0000587;gene_biotype=lncRNA;gene_name=ENSG00000293927;gene_sources=liftoff;ID=HG00642_ch_G0000587;Name=ENSG00000293927
HG00642_chrY	CAT	transcript	24540473	24557642	1000	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_G0000587;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=HG00642_ch_T0001678;Name=ENSG00000293927
HG00642_chrY	CAT	exon	24540473	24541794	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_T0001678;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=exon:HG00642_ch_T0001678:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24541795	24549833	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_T0001678;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=intron:HG00642_ch_T0001678:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24549834	24550002	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_T0001678;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=exon:HG00642_ch_T0001678:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24550003	24557543	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_T0001678;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=intron:HG00642_ch_T0001678:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24557544	24557642	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00642_ch_T0001678;gene_id=HG00642_ch_G0000587;Parent=HG00642_ch_T0001678;transcript_name=HG00642_ch_T0001678;gene_name=ENSG00000293927;ID=exon:HG00642_ch_T0001678:2;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24549834	24550002	.	-	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=HG00642_ch_G0000588;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=HG00642_ch_G0000588;Name=SEPTIN14P22
HG00642_chrY	CAT	transcript	24549834	24550002	1000	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG00642_ch_T0001679;gene_id=HG00642_ch_G0000588;Parent=HG00642_ch_G0000588;transcript_name=HG00642_ch_T0001679;gene_name=SEPTIN14P22;ID=HG00642_ch_T0001679;Name=SEPTIN14P22
HG00642_chrY	CAT	exon	24549834	24550002	.	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG00642_ch_T0001679;gene_id=HG00642_ch_G0000588;Parent=HG00642_ch_T0001679;transcript_name=HG00642_ch_T0001679;gene_name=SEPTIN14P22;ID=exon:HG00642_ch_T0001679:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24551924	24554728	.	+	.	source_gene_common_name=CICP2;source_gene=ENSG00000233740.1;gene_id=HG00642_ch_G0000589;gene_biotype=processed_pseudogene;gene_name=CICP2;gene_sources=liftoff,transMap_pairwise;ID=HG00642_ch_G0000589;Name=CICP2
HG00642_chrY	CAT	transcript	24551924	24554728	1000	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001680;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_G0000589;transcript_name=HG00642_ch_T0001680;gene_name=CICP2;ID=HG00642_ch_T0001680;Name=CICP2
HG00642_chrY	CAT	exon	24551924	24554191	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001680;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001680;transcript_name=HG00642_ch_T0001680;gene_name=CICP2;ID=exon:HG00642_ch_T0001680:0;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24554192	24554601	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001680;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001680;transcript_name=HG00642_ch_T0001680;gene_name=CICP2;ID=intron:HG00642_ch_T0001680:0;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24554602	24554728	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001680;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001680;transcript_name=HG00642_ch_T0001680;gene_name=CICP2;ID=exon:HG00642_ch_T0001680:1;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24551924	24554728	1000	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_G0000589;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=HG00642_ch_T0001681;Name=CICP2
HG00642_chrY	CAT	exon	24551924	24553703	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001681;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=exon:HG00642_ch_T0001681:0;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24553704	24553769	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001681;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=intron:HG00642_ch_T0001681:0;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24553770	24554191	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001681;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=exon:HG00642_ch_T0001681:1;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24554192	24554601	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001681;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=intron:HG00642_ch_T0001681:1;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24554602	24554728	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00642_ch_T0001681;gene_id=HG00642_ch_G0000589;Parent=HG00642_ch_T0001681;transcript_name=HG00642_ch_T0001681;gene_name=CICP2;ID=exon:HG00642_ch_T0001681:2;Name=CICP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24556039	24556820	.	-	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;alternative_source_transcripts=ENST00000413372.1;gene_id=HG00642_ch_G0000590;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=liftoff;ID=HG00642_ch_G0000590;Name=LINC00265-2P
HG00642_chrY	CAT	transcript	24556039	24556820	1000	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=HG00642_ch_T0001682;gene_id=HG00642_ch_G0000590;Parent=HG00642_ch_G0000590;transcript_name=HG00642_ch_T0001682;gene_name=LINC00265-2P;ID=HG00642_ch_T0001682;Name=LINC00265-2P
HG00642_chrY	CAT	exon	24556039	24556820	.	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=HG00642_ch_T0001682;gene_id=HG00642_ch_G0000590;Parent=HG00642_ch_T0001682;transcript_name=HG00642_ch_T0001682;gene_name=LINC00265-2P;ID=exon:HG00642_ch_T0001682:0;Name=LINC00265-2P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24594084	24600242	.	+	.	source_gene_common_name=UBE2Q2P4Y;source_gene=ENSG00000225491.1;alternative_source_transcripts=ENST00000433767.1;gene_id=HG00642_ch_G0000591;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P4Y;gene_sources=liftoff;ID=HG00642_ch_G0000591;Name=UBE2Q2P4Y
HG00642_chrY	CAT	transcript	24594084	24600242	1000	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00642_ch_T0001683;gene_id=HG00642_ch_G0000591;Parent=HG00642_ch_G0000591;transcript_name=HG00642_ch_T0001683;gene_name=UBE2Q2P4Y;ID=HG00642_ch_T0001683;Name=UBE2Q2P4Y
HG00642_chrY	CAT	exon	24594084	24594185	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00642_ch_T0001683;gene_id=HG00642_ch_G0000591;Parent=HG00642_ch_T0001683;transcript_name=HG00642_ch_T0001683;gene_name=UBE2Q2P4Y;ID=exon:HG00642_ch_T0001683:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24594186	24600137	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00642_ch_T0001683;gene_id=HG00642_ch_G0000591;Parent=HG00642_ch_T0001683;transcript_name=HG00642_ch_T0001683;gene_name=UBE2Q2P4Y;ID=intron:HG00642_ch_T0001683:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24600138	24600242	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00642_ch_T0001683;gene_id=HG00642_ch_G0000591;Parent=HG00642_ch_T0001683;transcript_name=HG00642_ch_T0001683;gene_name=UBE2Q2P4Y;ID=exon:HG00642_ch_T0001683:1;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24617487	24623502	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000239533.7;gene_id=HG00642_ch_G0000592;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG00642_ch_G0000592;Name=GOLGA2P2Y
HG00642_chrY	CAT	transcript	24617487	24623502	1000	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_G0000592;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=HG00642_ch_T0001684;Name=GOLGA2P2Y
HG00642_chrY	CAT	exon	24617487	24617606	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24617607	24618219	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24618220	24618279	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24618280	24618463	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24618464	24618544	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24618545	24619185	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24619186	24619275	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24619276	24619663	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24619664	24620014	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24620015	24620312	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24620313	24620370	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24620371	24621726	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24621727	24621801	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24621802	24622221	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622222	24622310	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622311	24622565	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622566	24622754	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622755	24622843	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622844	24622936	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622937	24623018	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24623019	24623114	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24623115	24623197	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24623198	24623344	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24623345	24623445	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001684:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24623446	24623502	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001684;gene_id=HG00642_ch_G0000592;Parent=HG00642_ch_T0001684;transcript_name=HG00642_ch_T0001684;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001684:12;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24618237	24623102	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000291016.1;gene_id=HG00642_ch_G0000593;gene_biotype=lncRNA;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG00642_ch_G0000593;Name=GOLGA2P2Y
HG00642_chrY	CAT	transcript	24618237	24623102	1000	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_G0000593;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=HG00642_ch_T0001685;Name=GOLGA2P2Y
HG00642_chrY	CAT	exon	24618237	24618279	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24618280	24618465	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24618466	24618544	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24618545	24619664	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24619665	24620014	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24620015	24620312	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24620313	24620370	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24620371	24621726	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24621727	24621801	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24621802	24622221	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622222	24622310	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622311	24622565	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622566	24622754	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622755	24622843	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24622844	24622936	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24622937	24623018	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=intron:HG00642_ch_T0001685:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24623019	24623102	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00642_ch_T0001685;gene_id=HG00642_ch_G0000593;Parent=HG00642_ch_T0001685;transcript_name=HG00642_ch_T0001685;gene_name=GOLGA2P2Y;ID=exon:HG00642_ch_T0001685:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24621853	24622111	.	+	.	source_gene_common_name=RN7SL818P;source_gene=ENSG00000274234.1;alternative_source_transcripts=ENST00000485099.3;gene_id=HG00642_ch_G0000594;gene_biotype=misc_RNA;gene_name=RN7SL818P;gene_sources=liftoff;ID=HG00642_ch_G0000594;Name=RN7SL818P
HG00642_chrY	CAT	transcript	24621853	24622111	1000	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG00642_ch_T0001686;gene_id=HG00642_ch_G0000594;Parent=HG00642_ch_G0000594;transcript_name=HG00642_ch_T0001686;gene_name=RN7SL818P;ID=HG00642_ch_T0001686;Name=RN7SL818P
HG00642_chrY	CAT	exon	24621853	24622111	.	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG00642_ch_T0001686;gene_id=HG00642_ch_G0000594;Parent=HG00642_ch_T0001686;transcript_name=HG00642_ch_T0001686;gene_name=RN7SL818P;ID=exon:HG00642_ch_T0001686:0;Name=RN7SL818P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24626939	24636553	.	+	.	source_gene_common_name=ENSG00000284380;source_gene=ENSG00000284380.1;gene_id=HG00642_ch_G0000595;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284380;gene_sources=liftoff;ID=HG00642_ch_G0000595;Name=ENSG00000284380
HG00642_chrY	CAT	transcript	24626939	24636553	1000	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_G0000595;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=HG00642_ch_T0001687;Name=ENSG00000284380
HG00642_chrY	CAT	exon	24626939	24627023	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_T0001687;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=exon:HG00642_ch_T0001687:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24627024	24628444	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_T0001687;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=intron:HG00642_ch_T0001687:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24628445	24628594	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_T0001687;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=exon:HG00642_ch_T0001687:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24628595	24636391	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_T0001687;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=intron:HG00642_ch_T0001687:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24636392	24636553	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG00642_ch_T0001687;gene_id=HG00642_ch_G0000595;Parent=HG00642_ch_T0001687;transcript_name=HG00642_ch_T0001687;gene_name=ENSG00000284380;ID=exon:HG00642_ch_T0001687:2;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24627031	24636612	.	+	.	source_gene_common_name=ENSG00000310249;source_gene=ENSG00000310249.1;gene_id=HG00642_ch_G0000596;gene_biotype=lncRNA;gene_name=ENSG00000310249;gene_sources=liftoff;ID=HG00642_ch_G0000596;Name=ENSG00000310249
HG00642_chrY	CAT	transcript	24627031	24636612	1000	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_G0000596;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=HG00642_ch_T0001688;Name=ENSG00000310249
HG00642_chrY	CAT	exon	24627031	24627398	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001688;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001688:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24627399	24628444	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001688;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=intron:HG00642_ch_T0001688:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24628445	24628594	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001688;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001688:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24628595	24636391	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001688;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=intron:HG00642_ch_T0001688:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24636392	24636612	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001688;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001688;transcript_name=HG00642_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001688:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24627287	24636612	1000	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_G0000596;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=HG00642_ch_T0001689;Name=ENSG00000310249
HG00642_chrY	CAT	exon	24627287	24627398	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001689;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001689:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24627399	24628415	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001689;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=intron:HG00642_ch_T0001689:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24628416	24628594	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001689;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001689:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24628595	24636391	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001689;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=intron:HG00642_ch_T0001689:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24636392	24636612	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001689;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001689;transcript_name=HG00642_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001689:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24628415	24636491	1000	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001690;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_G0000596;transcript_name=HG00642_ch_T0001690;gene_name=ENSG00000310249;ID=HG00642_ch_T0001690;Name=ENSG00000310249
HG00642_chrY	CAT	exon	24628415	24628594	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001690;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001690;transcript_name=HG00642_ch_T0001690;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001690:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24628595	24636391	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001690;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001690;transcript_name=HG00642_ch_T0001690;gene_name=ENSG00000310249;ID=intron:HG00642_ch_T0001690:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24636392	24636491	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00642_ch_T0001690;gene_id=HG00642_ch_G0000596;Parent=HG00642_ch_T0001690;transcript_name=HG00642_ch_T0001690;gene_name=ENSG00000310249;ID=exon:HG00642_ch_T0001690:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24641201	24646562	.	+	.	source_gene_common_name=CSPG4P3Y;source_gene=ENSG00000172342.5;gene_id=HG00642_ch_G0000597;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P3Y;gene_sources=liftoff;ID=HG00642_ch_G0000597;Name=CSPG4P3Y
HG00642_chrY	CAT	transcript	24641201	24646562	1000	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00642_ch_T0001691;gene_id=HG00642_ch_G0000597;Parent=HG00642_ch_G0000597;transcript_name=HG00642_ch_T0001691;gene_name=CSPG4P3Y;ID=HG00642_ch_T0001691;Name=CSPG4P3Y
HG00642_chrY	CAT	exon	24641201	24641364	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00642_ch_T0001691;gene_id=HG00642_ch_G0000597;Parent=HG00642_ch_T0001691;transcript_name=HG00642_ch_T0001691;gene_name=CSPG4P3Y;ID=exon:HG00642_ch_T0001691:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24641365	24643002	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00642_ch_T0001691;gene_id=HG00642_ch_G0000597;Parent=HG00642_ch_T0001691;transcript_name=HG00642_ch_T0001691;gene_name=CSPG4P3Y;ID=intron:HG00642_ch_T0001691:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24643003	24646562	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00642_ch_T0001691;gene_id=HG00642_ch_G0000597;Parent=HG00642_ch_T0001691;transcript_name=HG00642_ch_T0001691;gene_name=CSPG4P3Y;ID=exon:HG00642_ch_T0001691:1;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24645840	24649637	.	+	.	source_gene_common_name=CSPG4P2Y;source_gene=ENSG00000244231.1;gene_id=HG00642_ch_G0000598;gene_biotype=lncRNA;gene_name=CSPG4P2Y;gene_sources=liftoff;ID=HG00642_ch_G0000598;Name=CSPG4P2Y
HG00642_chrY	CAT	transcript	24645840	24649637	1000	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00642_ch_T0001692;gene_id=HG00642_ch_G0000598;Parent=HG00642_ch_G0000598;transcript_name=HG00642_ch_T0001692;gene_name=CSPG4P2Y;ID=HG00642_ch_T0001692;Name=CSPG4P2Y
HG00642_chrY	CAT	exon	24645840	24646562	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00642_ch_T0001692;gene_id=HG00642_ch_G0000598;Parent=HG00642_ch_T0001692;transcript_name=HG00642_ch_T0001692;gene_name=CSPG4P2Y;ID=exon:HG00642_ch_T0001692:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24646563	24649565	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00642_ch_T0001692;gene_id=HG00642_ch_G0000598;Parent=HG00642_ch_T0001692;transcript_name=HG00642_ch_T0001692;gene_name=CSPG4P2Y;ID=intron:HG00642_ch_T0001692:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24649566	24649637	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00642_ch_T0001692;gene_id=HG00642_ch_G0000598;Parent=HG00642_ch_T0001692;transcript_name=HG00642_ch_T0001692;gene_name=CSPG4P2Y;ID=exon:HG00642_ch_T0001692:1;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24649566	24653755	.	+	.	source_gene_common_name=DNM1P24;source_gene=ENSG00000242854.1;gene_id=HG00642_ch_G0000599;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=DNM1P24;gene_sources=liftoff;ID=HG00642_ch_G0000599;Name=DNM1P24
HG00642_chrY	CAT	transcript	24649566	24653755	1000	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_G0000599;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=HG00642_ch_T0001693;Name=DNM1P24
HG00642_chrY	CAT	exon	24649566	24649797	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_T0001693;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=exon:HG00642_ch_T0001693:0;Name=DNM1P24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24649798	24650048	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_T0001693;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=intron:HG00642_ch_T0001693:0;Name=DNM1P24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24650049	24650253	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_T0001693;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=exon:HG00642_ch_T0001693:1;Name=DNM1P24;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24650254	24653702	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_T0001693;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=intron:HG00642_ch_T0001693:1;Name=DNM1P24;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24653703	24653755	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00642_ch_T0001693;gene_id=HG00642_ch_G0000599;Parent=HG00642_ch_T0001693;transcript_name=HG00642_ch_T0001693;gene_name=DNM1P24;ID=exon:HG00642_ch_T0001693:2;Name=DNM1P24;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24650000	24650594	.	-	.	source_gene_common_name=ENSG00000230977;source_gene=ENSG00000230977.1;alternative_source_transcripts=ENST00000418278.1;gene_id=HG00642_ch_G0000600;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230977;gene_sources=liftoff;ID=HG00642_ch_G0000600;Name=ENSG00000230977
HG00642_chrY	CAT	transcript	24650000	24650594	1000	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;alternative_source_transcripts=ENST00000418278.1;transcript_id=HG00642_ch_T0001694;gene_id=HG00642_ch_G0000600;Parent=HG00642_ch_G0000600;transcript_name=HG00642_ch_T0001694;gene_name=ENSG00000230977;ID=HG00642_ch_T0001694;Name=ENSG00000230977
HG00642_chrY	CAT	exon	24650000	24650594	.	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;alternative_source_transcripts=ENST00000418278.1;transcript_id=HG00642_ch_T0001694;gene_id=HG00642_ch_G0000600;Parent=HG00642_ch_T0001694;transcript_name=HG00642_ch_T0001694;gene_name=ENSG00000230977;ID=exon:HG00642_ch_T0001694:0;Name=ENSG00000230977;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24656638	24661439	.	-	.	source_gene_common_name=ENSG00000297966;source_gene=ENSG00000297966.1;gene_id=HG00642_ch_G0000601;gene_biotype=lncRNA;gene_name=ENSG00000297966;gene_sources=liftoff;ID=HG00642_ch_G0000601;Name=ENSG00000297966
HG00642_chrY	CAT	transcript	24656638	24661009	1000	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=HG00642_ch_T0001695;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24656638	24658709	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001695:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001695:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001695:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001695:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001695:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001695:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24661009	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001695;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001695;transcript_name=HG00642_ch_T0001695;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001695:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660844	1000	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=HG00642_ch_T0001696;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001696:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001696:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001696:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001696:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001696:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660672	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001696:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660673	24660844	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001696;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001696;transcript_name=HG00642_ch_T0001696;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001696:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660814	1000	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=HG00642_ch_T0001697;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001697:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001697:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001697:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001697:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001697:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001697:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24660814	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001697;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001697;transcript_name=HG00642_ch_T0001697;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001697:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660815	1000	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=HG00642_ch_T0001698;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001698:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001698:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001698:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001698:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001698:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660572	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001698:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660573	24660815	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001698;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001698;transcript_name=HG00642_ch_T0001698;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001698:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660513	1000	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=HG00642_ch_T0001699;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001699:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001699:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001699:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001699:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001699:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660245	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001699:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660246	24660513	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001699;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001699;transcript_name=HG00642_ch_T0001699;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001699:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660845	1000	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=HG00642_ch_T0001700;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001700:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001700:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001700:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001700:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001700:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660672	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001700:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660673	24660845	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001700;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001700;transcript_name=HG00642_ch_T0001700;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001700:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660606	1000	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=HG00642_ch_T0001701;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001701:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001701:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001701:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001701:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001701:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660486	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001701:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660487	24660606	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001701;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001701;transcript_name=HG00642_ch_T0001701;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001701:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660883	1000	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=HG00642_ch_T0001702;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001702:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001702:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001702:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660056	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001702:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660057	24660134	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001702:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001702:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24660883	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001702;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001702;transcript_name=HG00642_ch_T0001702;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001702:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24661439	1000	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=HG00642_ch_T0001703;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001703:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001703:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001703:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001703:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001703:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24661358	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001703:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24661359	24661439	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001703;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001703;transcript_name=HG00642_ch_T0001703;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001703:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660594	1000	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=HG00642_ch_T0001704;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24659033	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001704;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001704:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001704;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001704:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001704;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001704:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001704;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001704:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24660594	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001704;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001704;transcript_name=HG00642_ch_T0001704;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001704:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660883	1000	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=HG00642_ch_T0001705;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001705:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001705:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001705:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001705:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001705:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660572	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001705:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660573	24660883	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001705;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001705;transcript_name=HG00642_ch_T0001705;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001705:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660232	1000	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=HG00642_ch_T0001706;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001706;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001706:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001706;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001706:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001706;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001706:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001706;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001706:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660232	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001706;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001706;transcript_name=HG00642_ch_T0001706;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001706:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24661416	1000	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=HG00642_ch_T0001707;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001707:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001707:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001707:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001707:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001707:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24661358	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001707:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24661359	24661416	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001707;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001707;transcript_name=HG00642_ch_T0001707;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001707:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658545	24660696	1000	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=HG00642_ch_T0001708;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658545	24658709	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001708:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001708:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001708:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660056	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001708:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660057	24660134	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001708:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660572	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001708:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660573	24660696	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001708;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001708;transcript_name=HG00642_ch_T0001708;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001708:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658546	24660387	1000	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=HG00642_ch_T0001709;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658546	24659033	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001709;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001709:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001709;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001709:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001709;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001709:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660245	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001709;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001709:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660246	24660387	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001709;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001709;transcript_name=HG00642_ch_T0001709;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001709:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658546	24660429	1000	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=HG00642_ch_T0001710;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658546	24658709	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001710:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001710:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001710:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001710:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001710:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660245	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001710:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660246	24660429	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001710;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001710;transcript_name=HG00642_ch_T0001710;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001710:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658546	24659238	1000	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001711;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001711;gene_name=ENSG00000297966;ID=HG00642_ch_T0001711;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658546	24658709	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001711;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001711;transcript_name=HG00642_ch_T0001711;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001711:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001711;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001711;transcript_name=HG00642_ch_T0001711;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001711:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659238	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001711;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001711;transcript_name=HG00642_ch_T0001711;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001711:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658546	24660419	1000	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=HG00642_ch_T0001712;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658546	24658709	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001712:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001712:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001712:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660056	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001712:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660057	24660134	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001712:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660245	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001712:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660246	24660419	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001712;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001712;transcript_name=HG00642_ch_T0001712;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001712:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658547	24660610	1000	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=HG00642_ch_T0001713;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658547	24659033	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001713;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001713:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24659895	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001713;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001713:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24659896	24660134	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001713;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001713:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001713;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001713:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24660610	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001713;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001713;transcript_name=HG00642_ch_T0001713;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001713:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24658548	24660629	1000	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_G0000601;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=HG00642_ch_T0001714;Name=ENSG00000297966
HG00642_chrY	CAT	exon	24658548	24658709	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001714:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001714:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001714:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660056	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001714:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660057	24660134	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001714:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660486	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=intron:HG00642_ch_T0001714:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660487	24660629	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00642_ch_T0001714;gene_id=HG00642_ch_G0000601;Parent=HG00642_ch_T0001714;transcript_name=HG00642_ch_T0001714;gene_name=ENSG00000297966;ID=exon:HG00642_ch_T0001714:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24658577	24664884	.	-	.	source_gene_common_name=GOLGA6L11P;source_gene=ENSG00000223698.3;gene_id=HG00642_ch_G0000602;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L11P;gene_sources=liftoff;ID=HG00642_ch_G0000602;Name=GOLGA6L11P
HG00642_chrY	CAT	transcript	24658577	24664884	1000	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_G0000602;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=HG00642_ch_T0001715;Name=GOLGA6L11P
HG00642_chrY	CAT	exon	24658577	24658709	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24658710	24658918	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24658919	24659033	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24659034	24660073	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660074	24660134	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660135	24660401	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24660402	24660970	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24660971	24661358	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24661359	24661433	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24661434	24662089	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24662090	24662170	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24662171	24662355	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24662356	24662415	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24662416	24663037	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24663038	24663157	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24663158	24664800	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=intron:HG00642_ch_T0001715:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24664801	24664884	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00642_ch_T0001715;gene_id=HG00642_ch_G0000602;Parent=HG00642_ch_T0001715;transcript_name=HG00642_ch_T0001715;gene_name=GOLGA6L11P;ID=exon:HG00642_ch_T0001715:8;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24675227	24690711	.	-	.	source_gene_common_name=ENSG00000235981;source_gene=ENSG00000235981.2;gene_id=HG00642_ch_G0000603;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235981;gene_sources=liftoff;ID=HG00642_ch_G0000603;Name=ENSG00000235981
HG00642_chrY	CAT	transcript	24675227	24690711	1000	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_G0000603;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=HG00642_ch_T0001716;Name=ENSG00000235981
HG00642_chrY	CAT	exon	24675227	24675322	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24675323	24676049	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=intron:HG00642_ch_T0001716:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24676050	24676098	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24676099	24682603	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=intron:HG00642_ch_T0001716:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24682604	24682662	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24682663	24686950	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=intron:HG00642_ch_T0001716:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24688128	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=intron:HG00642_ch_T0001716:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24688129	24688213	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24688214	24690573	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=intron:HG00642_ch_T0001716:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690574	24690711	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00642_ch_T0001716;gene_id=HG00642_ch_G0000603;Parent=HG00642_ch_T0001716;transcript_name=HG00642_ch_T0001716;gene_name=ENSG00000235981;ID=exon:HG00642_ch_T0001716:5;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24679705	24695682	.	-	.	source_gene_common_name=ENSG00000299288;source_gene=ENSG00000299288.1;gene_id=HG00642_ch_G0000604;gene_biotype=lncRNA;gene_name=ENSG00000299288;gene_sources=liftoff;ID=HG00642_ch_G0000604;Name=ENSG00000299288
HG00642_chrY	CAT	transcript	24679705	24694902	1000	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=HG00642_ch_T0001717;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24679705	24680723	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001717:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001717:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001717:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24690573	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001717:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690574	24690711	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001717:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001717:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24694902	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001717;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001717;transcript_name=HG00642_ch_T0001717;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001717:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24679705	24695127	1000	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=HG00642_ch_T0001718;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24679705	24680723	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001718:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001718:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001718:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24688128	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001718:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24688129	24688213	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001718:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24688214	24690589	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001718:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690590	24690711	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001718:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001718:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24695127	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001718;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001718;transcript_name=HG00642_ch_T0001718;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001718:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24680288	24695682	1000	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=HG00642_ch_T0001719;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24680288	24680723	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001719:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24688128	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001719:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24688129	24688213	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24688214	24690589	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001719:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690590	24690711	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001719:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24694829	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24694830	24695577	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001719:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24695578	24695682	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001719;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001719;transcript_name=HG00642_ch_T0001719;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001719:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24680288	24695682	1000	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=HG00642_ch_T0001720;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24680288	24680723	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001720:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24688128	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001720:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24688129	24688213	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24688214	24690573	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001720:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690574	24690711	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001720:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24694829	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24694830	24695577	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001720:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24695578	24695682	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001720;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001720;transcript_name=HG00642_ch_T0001720;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001720:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24680288	24695682	1000	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=HG00642_ch_T0001721;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24680288	24680723	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001721:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001721:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001721:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24690573	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001721:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690574	24690711	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001721:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24695577	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001721:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24695578	24695682	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001721;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001721;transcript_name=HG00642_ch_T0001721;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001721:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24680301	24695078	1000	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=HG00642_ch_T0001722;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24680301	24680723	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001722:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001722:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001722:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24690589	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001722:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690590	24690711	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001722:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001722:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24695078	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001722;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001722;transcript_name=HG00642_ch_T0001722;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001722:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24680301	24695675	1000	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_G0000604;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=HG00642_ch_T0001723;Name=ENSG00000299288
HG00642_chrY	CAT	exon	24680301	24680723	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001723:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24680724	24686950	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001723:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24686951	24687035	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001723:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24687036	24690573	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001723:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24690574	24690711	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001723:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24690712	24694666	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001723:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24694667	24694829	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001723:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24694830	24695577	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=intron:HG00642_ch_T0001723:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24695578	24695675	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00642_ch_T0001723;gene_id=HG00642_ch_G0000604;Parent=HG00642_ch_T0001723;transcript_name=HG00642_ch_T0001723;gene_name=ENSG00000299288;ID=exon:HG00642_ch_T0001723:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24727037	24728948	.	-	.	source_gene_common_name=CDY18P;source_gene=ENSG00000232205.1;alternative_source_transcripts=ENST00000438294.1;gene_id=HG00642_ch_G0000605;gene_biotype=unprocessed_pseudogene;gene_name=CDY18P;gene_sources=liftoff;ID=HG00642_ch_G0000605;Name=CDY18P
HG00642_chrY	CAT	transcript	24727037	24728948	1000	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00642_ch_T0001724;gene_id=HG00642_ch_G0000605;Parent=HG00642_ch_G0000605;transcript_name=HG00642_ch_T0001724;gene_name=CDY18P;ID=HG00642_ch_T0001724;Name=CDY18P
HG00642_chrY	CAT	exon	24727037	24728451	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00642_ch_T0001724;gene_id=HG00642_ch_G0000605;Parent=HG00642_ch_T0001724;transcript_name=HG00642_ch_T0001724;gene_name=CDY18P;ID=exon:HG00642_ch_T0001724:0;Name=CDY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24728452	24728754	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00642_ch_T0001724;gene_id=HG00642_ch_G0000605;Parent=HG00642_ch_T0001724;transcript_name=HG00642_ch_T0001724;gene_name=CDY18P;ID=intron:HG00642_ch_T0001724:0;Name=CDY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24728755	24728948	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00642_ch_T0001724;gene_id=HG00642_ch_G0000605;Parent=HG00642_ch_T0001724;transcript_name=HG00642_ch_T0001724;gene_name=CDY18P;ID=exon:HG00642_ch_T0001724:1;Name=CDY18P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24742709	24751351	.	+	.	source_gene_common_name=USP9YP31;source_gene=ENSG00000229250.1;alternative_source_transcripts=ENST00000431405.1;gene_id=HG00642_ch_G0000606;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP31;gene_sources=liftoff;ID=HG00642_ch_G0000606;Name=USP9YP31
HG00642_chrY	CAT	transcript	24742709	24751351	1000	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_G0000606;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=HG00642_ch_T0001725;Name=USP9YP31
HG00642_chrY	CAT	exon	24742709	24742930	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=exon:HG00642_ch_T0001725:0;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24742931	24745075	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=intron:HG00642_ch_T0001725:0;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24745076	24745295	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=exon:HG00642_ch_T0001725:1;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24745296	24747093	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=intron:HG00642_ch_T0001725:1;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24747094	24747283	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=exon:HG00642_ch_T0001725:2;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24747284	24749098	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=intron:HG00642_ch_T0001725:2;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24749099	24749227	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=exon:HG00642_ch_T0001725:3;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24749228	24751231	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=intron:HG00642_ch_T0001725:3;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24751232	24751351	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00642_ch_T0001725;gene_id=HG00642_ch_G0000606;Parent=HG00642_ch_T0001725;transcript_name=HG00642_ch_T0001725;gene_name=USP9YP31;ID=exon:HG00642_ch_T0001725:4;Name=USP9YP31;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24753243	24755256	.	-	.	source_gene_common_name=USP9YP35;source_gene=ENSG00000237467.1;alternative_source_transcripts=ENST00000435696.1;gene_id=HG00642_ch_G0000607;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP35;gene_sources=liftoff;ID=HG00642_ch_G0000607;Name=USP9YP35
HG00642_chrY	CAT	transcript	24753243	24755256	1000	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00642_ch_T0001726;gene_id=HG00642_ch_G0000607;Parent=HG00642_ch_G0000607;transcript_name=HG00642_ch_T0001726;gene_name=USP9YP35;ID=HG00642_ch_T0001726;Name=USP9YP35
HG00642_chrY	CAT	exon	24753243	24753432	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00642_ch_T0001726;gene_id=HG00642_ch_G0000607;Parent=HG00642_ch_T0001726;transcript_name=HG00642_ch_T0001726;gene_name=USP9YP35;ID=exon:HG00642_ch_T0001726:0;Name=USP9YP35;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24753433	24755034	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00642_ch_T0001726;gene_id=HG00642_ch_G0000607;Parent=HG00642_ch_T0001726;transcript_name=HG00642_ch_T0001726;gene_name=USP9YP35;ID=intron:HG00642_ch_T0001726:0;Name=USP9YP35;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24755035	24755256	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00642_ch_T0001726;gene_id=HG00642_ch_G0000607;Parent=HG00642_ch_T0001726;transcript_name=HG00642_ch_T0001726;gene_name=USP9YP35;ID=exon:HG00642_ch_T0001726:1;Name=USP9YP35;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24781567	24783176	.	+	.	source_gene_common_name=CDY17P;source_gene=ENSG00000231375.1;alternative_source_transcripts=ENST00000414121.1;gene_id=HG00642_ch_G0000608;gene_biotype=unprocessed_pseudogene;gene_name=CDY17P;gene_sources=liftoff;ID=HG00642_ch_G0000608;Name=CDY17P
HG00642_chrY	CAT	transcript	24781567	24783176	1000	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00642_ch_T0001727;gene_id=HG00642_ch_G0000608;Parent=HG00642_ch_G0000608;transcript_name=HG00642_ch_T0001727;gene_name=CDY17P;ID=HG00642_ch_T0001727;Name=CDY17P
HG00642_chrY	CAT	exon	24781567	24781632	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00642_ch_T0001727;gene_id=HG00642_ch_G0000608;Parent=HG00642_ch_T0001727;transcript_name=HG00642_ch_T0001727;gene_name=CDY17P;ID=exon:HG00642_ch_T0001727:0;Name=CDY17P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24781633	24781960	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00642_ch_T0001727;gene_id=HG00642_ch_G0000608;Parent=HG00642_ch_T0001727;transcript_name=HG00642_ch_T0001727;gene_name=CDY17P;ID=intron:HG00642_ch_T0001727:0;Name=CDY17P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24781961	24783176	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00642_ch_T0001727;gene_id=HG00642_ch_G0000608;Parent=HG00642_ch_T0001727;transcript_name=HG00642_ch_T0001727;gene_name=CDY17P;ID=exon:HG00642_ch_T0001727:1;Name=CDY17P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24785035	24787825	.	+	.	source_gene_common_name=CDY1B;source_gene=ENSG00000172352.5;alternative_source_transcripts=ENST00000382407.1;gene_id=HG00642_ch_G0000609;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG00642_ch_G0000609;Name=CDY1B
HG00642_chrY	CAT	transcript	24785035	24787261	100	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00642_ch_T0001728;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_G0000609;transcript_name=HG00642_ch_T0001728;gene_name=CDY1B;ID=HG00642_ch_T0001728;Name=CDY1B
HG00642_chrY	CAT	exon	24785035	24787261	.	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00642_ch_T0001728;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001728;transcript_name=HG00642_ch_T0001728;gene_name=CDY1B;ID=exon:HG00642_ch_T0001728:0;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24785366	24786988	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00642_ch_T0001728;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001728;transcript_name=HG00642_ch_T0001728;gene_name=CDY1B;ID=CDS:HG00642_ch_T0001728:0;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24785366	24785368	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00642_ch_T0001728;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001728;transcript_name=HG00642_ch_T0001728;gene_name=CDY1B;ID=start_codon:HG00642_ch_T0001728;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24786986	24786988	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00642_ch_T0001728;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001728;transcript_name=HG00642_ch_T0001728;gene_name=CDY1B;ID=stop_codon:HG00642_ch_T0001728;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	24785085	24787825	100	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_G0000609;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=HG00642_ch_T0001729;Name=CDY1B
HG00642_chrY	CAT	exon	24785085	24786957	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=exon:HG00642_ch_T0001729:0;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24785366	24786957	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=CDS:HG00642_ch_T0001729:0;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	24785366	24785368	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=start_codon:HG00642_ch_T0001729;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24786958	24787377	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=intron:HG00642_ch_T0001729:0;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24787378	24787825	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=exon:HG00642_ch_T0001729:1;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	24787378	24787450	.	+	1	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=CDS:HG00642_ch_T0001729:1;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	24787448	24787450	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00642_ch_T0001729;gene_id=HG00642_ch_G0000609;Parent=HG00642_ch_T0001729;transcript_name=HG00642_ch_T0001729;gene_name=CDY1B;ID=stop_codon:HG00642_ch_T0001729;Name=CDY1B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24825824	24826150	.	+	.	source_gene_common_name=ELOCP34;source_gene=ENSG00000270535.1;alternative_source_transcripts=ENST00000440624.1;gene_id=HG00642_ch_G0000610;gene_biotype=processed_pseudogene;gene_name=ELOCP34;gene_sources=liftoff;ID=HG00642_ch_G0000610;Name=ELOCP34
HG00642_chrY	CAT	transcript	24825824	24826150	1000	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG00642_ch_T0001730;gene_id=HG00642_ch_G0000610;Parent=HG00642_ch_G0000610;transcript_name=HG00642_ch_T0001730;gene_name=ELOCP34;ID=HG00642_ch_T0001730;Name=ELOCP34
HG00642_chrY	CAT	exon	24825824	24826150	.	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG00642_ch_T0001730;gene_id=HG00642_ch_G0000610;Parent=HG00642_ch_T0001730;transcript_name=HG00642_ch_T0001730;gene_name=ELOCP34;ID=exon:HG00642_ch_T0001730:0;Name=ELOCP34;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24837976	24860272	.	-	.	source_gene_common_name=OFD1P12Y;source_gene=ENSG00000232585.1;alternative_source_transcripts=ENST00000427963.1;gene_id=HG00642_ch_G0000611;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P12Y;gene_sources=liftoff;ID=HG00642_ch_G0000611;Name=OFD1P12Y
HG00642_chrY	CAT	transcript	24837976	24860272	1000	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_G0000611;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=HG00642_ch_T0001731;Name=OFD1P12Y
HG00642_chrY	CAT	exon	24837976	24838124	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24838125	24839739	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24839740	24839831	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24839832	24840935	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24840936	24841009	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24841010	24842785	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24842786	24842898	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24842899	24845004	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24845005	24845113	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24845114	24848157	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24848158	24848293	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24848294	24848631	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24848632	24848765	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24848766	24856269	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24856270	24856302	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24856303	24856387	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24856388	24856455	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24856456	24858662	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24858663	24858862	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24858863	24860173	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=intron:HG00642_ch_T0001731:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24860174	24860272	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1;transcript_id=HG00642_ch_T0001731;gene_id=HG00642_ch_G0000611;Parent=HG00642_ch_T0001731;transcript_name=HG00642_ch_T0001731;gene_name=OFD1P12Y;ID=exon:HG00642_ch_T0001731:10;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24862358	24865488	.	+	.	source_gene_common_name=TRAPPC2P10;source_gene=ENSG00000228465.1;alternative_source_transcripts=ENST00000415662.1;gene_id=HG00642_ch_G0000612;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P10;gene_sources=liftoff;ID=HG00642_ch_G0000612;Name=TRAPPC2P10
HG00642_chrY	CAT	transcript	24862358	24865488	1000	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_G0000612;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=HG00642_ch_T0001732;Name=TRAPPC2P10
HG00642_chrY	CAT	exon	24862358	24862469	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_T0001732;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=exon:HG00642_ch_T0001732:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24862470	24864833	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_T0001732;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=intron:HG00642_ch_T0001732:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24864834	24864965	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_T0001732;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=exon:HG00642_ch_T0001732:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24864966	24865409	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_T0001732;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=intron:HG00642_ch_T0001732:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24865410	24865488	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00642_ch_T0001732;gene_id=HG00642_ch_G0000612;Parent=HG00642_ch_T0001732;transcript_name=HG00642_ch_T0001732;gene_name=TRAPPC2P10;ID=exon:HG00642_ch_T0001732:2;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24872834	24876483	.	-	.	source_gene_common_name=RAB9AP5;source_gene=ENSG00000231423.1;alternative_source_transcripts=ENST00000437794.1;gene_id=HG00642_ch_G0000613;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP5;gene_sources=liftoff;ID=HG00642_ch_G0000613;Name=RAB9AP5
HG00642_chrY	CAT	transcript	24872834	24876483	1000	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1;transcript_id=HG00642_ch_T0001733;gene_id=HG00642_ch_G0000613;Parent=HG00642_ch_G0000613;transcript_name=HG00642_ch_T0001733;gene_name=RAB9AP5;ID=HG00642_ch_T0001733;Name=RAB9AP5
HG00642_chrY	CAT	exon	24872834	24873202	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1;transcript_id=HG00642_ch_T0001733;gene_id=HG00642_ch_G0000613;Parent=HG00642_ch_T0001733;transcript_name=HG00642_ch_T0001733;gene_name=RAB9AP5;ID=exon:HG00642_ch_T0001733:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24873203	24876255	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1;transcript_id=HG00642_ch_T0001733;gene_id=HG00642_ch_G0000613;Parent=HG00642_ch_T0001733;transcript_name=HG00642_ch_T0001733;gene_name=RAB9AP5;ID=intron:HG00642_ch_T0001733:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24876256	24876483	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1;transcript_id=HG00642_ch_T0001733;gene_id=HG00642_ch_G0000613;Parent=HG00642_ch_T0001733;transcript_name=HG00642_ch_T0001733;gene_name=RAB9AP5;ID=exon:HG00642_ch_T0001733:1;Name=RAB9AP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24880758	24887124	.	+	.	source_gene_common_name=USP9YP12;source_gene=ENSG00000227871.1;alternative_source_transcripts=ENST00000450481.1;gene_id=HG00642_ch_G0000614;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP12;gene_sources=liftoff;ID=HG00642_ch_G0000614;Name=USP9YP12
HG00642_chrY	CAT	transcript	24880758	24887124	1000	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_G0000614;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=HG00642_ch_T0001734;Name=USP9YP12
HG00642_chrY	CAT	exon	24880758	24880889	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=exon:HG00642_ch_T0001734:0;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24880890	24885950	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=intron:HG00642_ch_T0001734:0;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24885951	24886104	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=exon:HG00642_ch_T0001734:1;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24886105	24886459	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=intron:HG00642_ch_T0001734:1;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24886460	24886647	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=exon:HG00642_ch_T0001734:2;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24886648	24887028	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=intron:HG00642_ch_T0001734:2;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24887029	24887124	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1;transcript_id=HG00642_ch_T0001734;gene_id=HG00642_ch_G0000614;Parent=HG00642_ch_T0001734;transcript_name=HG00642_ch_T0001734;gene_name=USP9YP12;ID=exon:HG00642_ch_T0001734:3;Name=USP9YP12;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24886280	24886433	.	+	.	source_gene_common_name=RNU1-86P;source_gene=ENSG00000251917.1;alternative_source_transcripts=ENST00000516108.1;gene_id=HG00642_ch_G0000615;gene_biotype=snRNA;gene_name=RNU1-86P;gene_sources=liftoff;ID=HG00642_ch_G0000615;Name=RNU1-86P
HG00642_chrY	CAT	transcript	24886280	24886433	1000	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG00642_ch_T0001735;gene_id=HG00642_ch_G0000615;Parent=HG00642_ch_G0000615;transcript_name=HG00642_ch_T0001735;gene_name=RNU1-86P;ID=HG00642_ch_T0001735;Name=RNU1-86P
HG00642_chrY	CAT	exon	24886280	24886433	.	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG00642_ch_T0001735;gene_id=HG00642_ch_G0000615;Parent=HG00642_ch_T0001735;transcript_name=HG00642_ch_T0001735;gene_name=RNU1-86P;ID=exon:HG00642_ch_T0001735:0;Name=RNU1-86P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24891424	24896319	.	+	.	source_gene_common_name=TTTY3B;source_gene=ENSG00000280961.1;alternative_source_transcripts=ENST00000631331.1;gene_id=HG00642_ch_G0000616;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG00642_ch_G0000616;Name=TTTY3B
HG00642_chrY	CAT	transcript	24891424	24896319	1000	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_G0000616;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=HG00642_ch_T0001736;Name=TTTY3B
HG00642_chrY	CAT	exon	24891424	24891527	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_T0001736;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=exon:HG00642_ch_T0001736:0;Name=TTTY3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24891528	24893725	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_T0001736;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=intron:HG00642_ch_T0001736:0;Name=TTTY3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24893726	24893860	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_T0001736;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=exon:HG00642_ch_T0001736:1;Name=TTTY3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24893861	24896214	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_T0001736;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=intron:HG00642_ch_T0001736:1;Name=TTTY3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24896215	24896319	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00642_ch_T0001736;gene_id=HG00642_ch_G0000616;Parent=HG00642_ch_T0001736;transcript_name=HG00642_ch_T0001736;gene_name=TTTY3B;ID=exon:HG00642_ch_T0001736:2;Name=TTTY3B;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24892945	24898093	.	-	.	source_gene_common_name=USP9YP11;source_gene=ENSG00000226369.1;alternative_source_transcripts=ENST00000427537.1;gene_id=HG00642_ch_G0000617;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP11;gene_sources=liftoff;ID=HG00642_ch_G0000617;Name=USP9YP11
HG00642_chrY	CAT	transcript	24892945	24898093	1000	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_G0000617;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=HG00642_ch_T0001737;Name=USP9YP11
HG00642_chrY	CAT	exon	24892945	24893135	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=exon:HG00642_ch_T0001737:0;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24893136	24894770	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=intron:HG00642_ch_T0001737:0;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24894771	24895033	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=exon:HG00642_ch_T0001737:1;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24895034	24896156	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=intron:HG00642_ch_T0001737:1;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24896157	24896380	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=exon:HG00642_ch_T0001737:2;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24896381	24898054	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=intron:HG00642_ch_T0001737:2;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24898055	24898093	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00642_ch_T0001737;gene_id=HG00642_ch_G0000617;Parent=HG00642_ch_T0001737;transcript_name=HG00642_ch_T0001737;gene_name=USP9YP11;ID=exon:HG00642_ch_T0001737:3;Name=USP9YP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24911532	24913137	.	-	.	source_gene_common_name=USP9YP13;source_gene=ENSG00000224571.1;alternative_source_transcripts=ENST00000417797.1;gene_id=HG00642_ch_G0000618;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP13;gene_sources=liftoff;ID=HG00642_ch_G0000618;Name=USP9YP13
HG00642_chrY	CAT	transcript	24911532	24913137	1000	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00642_ch_T0001738;gene_id=HG00642_ch_G0000618;Parent=HG00642_ch_G0000618;transcript_name=HG00642_ch_T0001738;gene_name=USP9YP13;ID=HG00642_ch_T0001738;Name=USP9YP13
HG00642_chrY	CAT	exon	24911532	24911791	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00642_ch_T0001738;gene_id=HG00642_ch_G0000618;Parent=HG00642_ch_T0001738;transcript_name=HG00642_ch_T0001738;gene_name=USP9YP13;ID=exon:HG00642_ch_T0001738:0;Name=USP9YP13;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	24911792	24912917	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00642_ch_T0001738;gene_id=HG00642_ch_G0000618;Parent=HG00642_ch_T0001738;transcript_name=HG00642_ch_T0001738;gene_name=USP9YP13;ID=intron:HG00642_ch_T0001738:0;Name=USP9YP13;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	24912918	24913137	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00642_ch_T0001738;gene_id=HG00642_ch_G0000618;Parent=HG00642_ch_T0001738;transcript_name=HG00642_ch_T0001738;gene_name=USP9YP13;ID=exon:HG00642_ch_T0001738:1;Name=USP9YP13;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24915319	24915801	.	+	.	source_gene_common_name=XKRYP4;source_gene=ENSG00000231026.1;alternative_source_transcripts=ENST00000414395.1;gene_id=HG00642_ch_G0000619;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP4;gene_sources=liftoff;ID=HG00642_ch_G0000619;Name=XKRYP4
HG00642_chrY	CAT	transcript	24915319	24915801	1000	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG00642_ch_T0001739;gene_id=HG00642_ch_G0000619;Parent=HG00642_ch_G0000619;transcript_name=HG00642_ch_T0001739;gene_name=XKRYP4;ID=HG00642_ch_T0001739;Name=XKRYP4
HG00642_chrY	CAT	exon	24915319	24915801	.	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG00642_ch_T0001739;gene_id=HG00642_ch_G0000619;Parent=HG00642_ch_T0001739;transcript_name=HG00642_ch_T0001739;gene_name=XKRYP4;ID=exon:HG00642_ch_T0001739:0;Name=XKRYP4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	24975940	24977509	.	+	.	source_gene_common_name=CDY15P;source_gene=ENSG00000223362.1;alternative_source_transcripts=ENST00000421995.1;gene_id=HG00642_ch_G0000620;gene_biotype=unprocessed_pseudogene;gene_name=CDY15P;gene_sources=liftoff;ID=HG00642_ch_G0000620;Name=CDY15P
HG00642_chrY	CAT	transcript	24975940	24977509	1000	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1;transcript_id=HG00642_ch_T0001740;gene_id=HG00642_ch_G0000620;Parent=HG00642_ch_G0000620;transcript_name=HG00642_ch_T0001740;gene_name=CDY15P;ID=HG00642_ch_T0001740;Name=CDY15P
HG00642_chrY	CAT	exon	24975940	24977509	.	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1;transcript_id=HG00642_ch_T0001740;gene_id=HG00642_ch_G0000620;Parent=HG00642_ch_T0001740;transcript_name=HG00642_ch_T0001740;gene_name=CDY15P;ID=exon:HG00642_ch_T0001740:0;Name=CDY15P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25023972	25024210	.	+	.	source_gene_common_name=ELOCP9;source_gene=ENSG00000231540.1;alternative_source_transcripts=ENST00000418624.1;gene_id=HG00642_ch_G0000621;gene_biotype=processed_pseudogene;gene_name=ELOCP9;gene_sources=liftoff;ID=HG00642_ch_G0000621;Name=ELOCP9
HG00642_chrY	CAT	transcript	25023972	25024210	1000	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1;transcript_id=HG00642_ch_T0001741;gene_id=HG00642_ch_G0000621;Parent=HG00642_ch_G0000621;transcript_name=HG00642_ch_T0001741;gene_name=ELOCP9;ID=HG00642_ch_T0001741;Name=ELOCP9
HG00642_chrY	CAT	exon	25023972	25024210	.	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1;transcript_id=HG00642_ch_T0001741;gene_id=HG00642_ch_G0000621;Parent=HG00642_ch_T0001741;transcript_name=HG00642_ch_T0001741;gene_name=ELOCP9;ID=exon:HG00642_ch_T0001741:0;Name=ELOCP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25034873	25061787	.	-	.	source_gene_common_name=OFD1P11Y;source_gene=ENSG00000237302.1;alternative_source_transcripts=ENST00000418213.1;gene_id=HG00642_ch_G0000622;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P11Y;gene_sources=liftoff;ID=HG00642_ch_G0000622;Name=OFD1P11Y
HG00642_chrY	CAT	transcript	25034873	25061787	1000	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_G0000622;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=HG00642_ch_T0001742;Name=OFD1P11Y
HG00642_chrY	CAT	exon	25034873	25034944	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25034945	25036046	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25036047	25036120	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25036121	25037906	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25037907	25038025	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25038026	25040673	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25040674	25040780	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25040781	25043826	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25043827	25043972	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25043973	25044316	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25044317	25044451	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25044452	25048281	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25048282	25048405	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25048406	25049195	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25049196	25049226	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25049227	25049310	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25049311	25049379	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25049380	25060069	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25060070	25060271	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25060272	25061689	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=intron:HG00642_ch_T0001742:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25061690	25061787	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1;transcript_id=HG00642_ch_T0001742;gene_id=HG00642_ch_G0000622;Parent=HG00642_ch_T0001742;transcript_name=HG00642_ch_T0001742;gene_name=OFD1P11Y;ID=exon:HG00642_ch_T0001742:10;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25067436	25070181	.	+	.	source_gene_common_name=TRAPPC2P9;source_gene=ENSG00000232845.1;alternative_source_transcripts=ENST00000434556.1;gene_id=HG00642_ch_G0000623;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P9;gene_sources=liftoff;ID=HG00642_ch_G0000623;Name=TRAPPC2P9
HG00642_chrY	CAT	transcript	25067436	25070181	1000	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_G0000623;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=HG00642_ch_T0001743;Name=TRAPPC2P9
HG00642_chrY	CAT	exon	25067436	25067547	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_T0001743;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=exon:HG00642_ch_T0001743:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25067548	25069501	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_T0001743;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=intron:HG00642_ch_T0001743:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25069502	25069646	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_T0001743;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=exon:HG00642_ch_T0001743:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25069647	25070095	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_T0001743;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=intron:HG00642_ch_T0001743:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25070096	25070181	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00642_ch_T0001743;gene_id=HG00642_ch_G0000623;Parent=HG00642_ch_T0001743;transcript_name=HG00642_ch_T0001743;gene_name=TRAPPC2P9;ID=exon:HG00642_ch_T0001743:2;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25081259	25081831	.	-	.	source_gene_common_name=RAB9AP1;source_gene=ENSG00000232910.1;alternative_source_transcripts=ENST00000449393.1;gene_id=HG00642_ch_G0000624;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP1;gene_sources=liftoff;ID=HG00642_ch_G0000624;Name=RAB9AP1
HG00642_chrY	CAT	transcript	25081259	25081831	1000	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG00642_ch_T0001744;gene_id=HG00642_ch_G0000624;Parent=HG00642_ch_G0000624;transcript_name=HG00642_ch_T0001744;gene_name=RAB9AP1;ID=HG00642_ch_T0001744;Name=RAB9AP1
HG00642_chrY	CAT	exon	25081259	25081831	.	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG00642_ch_T0001744;gene_id=HG00642_ch_G0000624;Parent=HG00642_ch_T0001744;transcript_name=HG00642_ch_T0001744;gene_name=RAB9AP1;ID=exon:HG00642_ch_T0001744:0;Name=RAB9AP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25086326	25092762	.	+	.	source_gene_common_name=USP9YP29;source_gene=ENSG00000232424.1;gene_id=HG00642_ch_G0000625;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP29;gene_sources=liftoff;ID=HG00642_ch_G0000625;Name=USP9YP29
HG00642_chrY	CAT	transcript	25086326	25092762	1000	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_G0000625;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=HG00642_ch_T0001745;Name=USP9YP29
HG00642_chrY	CAT	exon	25086326	25086453	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=exon:HG00642_ch_T0001745:0;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25086454	25091586	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=intron:HG00642_ch_T0001745:0;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25091587	25091736	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=exon:HG00642_ch_T0001745:1;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25091737	25091885	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=intron:HG00642_ch_T0001745:1;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25091886	25091915	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=exon:HG00642_ch_T0001745:2;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25091916	25092125	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=intron:HG00642_ch_T0001745:2;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25092126	25092284	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=exon:HG00642_ch_T0001745:3;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25092285	25092666	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=intron:HG00642_ch_T0001745:3;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25092667	25092762	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00642_ch_T0001745;gene_id=HG00642_ch_G0000625;Parent=HG00642_ch_T0001745;transcript_name=HG00642_ch_T0001745;gene_name=USP9YP29;ID=exon:HG00642_ch_T0001745:4;Name=USP9YP29;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25091915	25092078	.	+	.	source_gene_common_name=RNU1-97P;source_gene=ENSG00000252681.1;gene_id=HG00642_ch_G0000626;gene_biotype=snRNA;gene_name=RNU1-97P;gene_sources=liftoff;ID=HG00642_ch_G0000626;Name=RNU1-97P
HG00642_chrY	CAT	transcript	25091915	25092078	1000	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG00642_ch_T0001746;gene_id=HG00642_ch_G0000626;Parent=HG00642_ch_G0000626;transcript_name=HG00642_ch_T0001746;gene_name=RNU1-97P;ID=HG00642_ch_T0001746;Name=RNU1-97P
HG00642_chrY	CAT	exon	25091915	25092078	.	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG00642_ch_T0001746;gene_id=HG00642_ch_G0000626;Parent=HG00642_ch_T0001746;transcript_name=HG00642_ch_T0001746;gene_name=RNU1-97P;ID=exon:HG00642_ch_T0001746:0;Name=RNU1-97P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25096777	25098825	.	-	.	source_gene_common_name=USP9YP21;source_gene=ENSG00000227635.1;gene_id=HG00642_ch_G0000627;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP21;gene_sources=liftoff;ID=HG00642_ch_G0000627;Name=USP9YP21
HG00642_chrY	CAT	transcript	25096777	25098825	1000	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00642_ch_T0001747;gene_id=HG00642_ch_G0000627;Parent=HG00642_ch_G0000627;transcript_name=HG00642_ch_T0001747;gene_name=USP9YP21;ID=HG00642_ch_T0001747;Name=USP9YP21
HG00642_chrY	CAT	exon	25096777	25096959	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00642_ch_T0001747;gene_id=HG00642_ch_G0000627;Parent=HG00642_ch_T0001747;transcript_name=HG00642_ch_T0001747;gene_name=USP9YP21;ID=exon:HG00642_ch_T0001747:0;Name=USP9YP21;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25096960	25098576	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00642_ch_T0001747;gene_id=HG00642_ch_G0000627;Parent=HG00642_ch_T0001747;transcript_name=HG00642_ch_T0001747;gene_name=USP9YP21;ID=intron:HG00642_ch_T0001747:0;Name=USP9YP21;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25098577	25098825	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00642_ch_T0001747;gene_id=HG00642_ch_G0000627;Parent=HG00642_ch_T0001747;transcript_name=HG00642_ch_T0001747;gene_name=USP9YP21;ID=exon:HG00642_ch_T0001747:1;Name=USP9YP21;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25106212	25117098	.	+	.	source_gene_common_name=XKRYP3;source_gene=ENSG00000236620.1;alternative_source_transcripts=ENST00000442113.1;gene_id=HG00642_ch_G0000628;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP3;gene_sources=liftoff;ID=HG00642_ch_G0000628;Name=XKRYP3
HG00642_chrY	CAT	transcript	25106212	25117098	1000	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG00642_ch_T0001748;gene_id=HG00642_ch_G0000628;Parent=HG00642_ch_G0000628;transcript_name=HG00642_ch_T0001748;gene_name=XKRYP3;ID=HG00642_ch_T0001748;Name=XKRYP3
HG00642_chrY	CAT	exon	25106212	25106547	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG00642_ch_T0001748;gene_id=HG00642_ch_G0000628;Parent=HG00642_ch_T0001748;transcript_name=HG00642_ch_T0001748;gene_name=XKRYP3;ID=exon:HG00642_ch_T0001748:0;Name=XKRYP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25106548	25116318	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG00642_ch_T0001748;gene_id=HG00642_ch_G0000628;Parent=HG00642_ch_T0001748;transcript_name=HG00642_ch_T0001748;gene_name=XKRYP3;ID=intron:HG00642_ch_T0001748:0;Name=XKRYP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25116319	25117098	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG00642_ch_T0001748;gene_id=HG00642_ch_G0000628;Parent=HG00642_ch_T0001748;transcript_name=HG00642_ch_T0001748;gene_name=XKRYP3;ID=exon:HG00642_ch_T0001748:1;Name=XKRYP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25154186	25154517	.	-	.	source_gene_common_name=ELOCP16;source_gene=ENSG00000227915.1;alternative_source_transcripts=ENST00000444494.1;gene_id=HG00642_ch_G0000629;gene_biotype=unprocessed_pseudogene;gene_name=ELOCP16;gene_sources=liftoff;ID=HG00642_ch_G0000629;Name=ELOCP16
HG00642_chrY	CAT	transcript	25154186	25154517	1000	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG00642_ch_T0001749;gene_id=HG00642_ch_G0000629;Parent=HG00642_ch_G0000629;transcript_name=HG00642_ch_T0001749;gene_name=ELOCP16;ID=HG00642_ch_T0001749;Name=ELOCP16
HG00642_chrY	CAT	exon	25154186	25154517	.	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG00642_ch_T0001749;gene_id=HG00642_ch_G0000629;Parent=HG00642_ch_T0001749;transcript_name=HG00642_ch_T0001749;gene_name=ELOCP16;ID=exon:HG00642_ch_T0001749:0;Name=ELOCP16;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25157629	25158642	.	-	.	source_gene_common_name=CDY14P;source_gene=ENSG00000226873.1;alternative_source_transcripts=ENST00000431260.1;gene_id=HG00642_ch_G0000630;gene_biotype=unprocessed_pseudogene;gene_name=CDY14P;gene_sources=liftoff;ID=HG00642_ch_G0000630;Name=CDY14P
HG00642_chrY	CAT	transcript	25157629	25158642	1000	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG00642_ch_T0001750;gene_id=HG00642_ch_G0000630;Parent=HG00642_ch_G0000630;transcript_name=HG00642_ch_T0001750;gene_name=CDY14P;ID=HG00642_ch_T0001750;Name=CDY14P
HG00642_chrY	CAT	exon	25157629	25158642	.	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG00642_ch_T0001750;gene_id=HG00642_ch_G0000630;Parent=HG00642_ch_T0001750;transcript_name=HG00642_ch_T0001750;gene_name=CDY14P;ID=exon:HG00642_ch_T0001750:0;Name=CDY14P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25165200	25173556	.	+	.	source_gene_common_name=USP9YP18;source_gene=ENSG00000223407.1;alternative_source_transcripts=ENST00000425912.1;gene_id=HG00642_ch_G0000631;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP18;gene_sources=liftoff;ID=HG00642_ch_G0000631;Name=USP9YP18
HG00642_chrY	CAT	transcript	25165200	25173556	1000	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_G0000631;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=HG00642_ch_T0001751;Name=USP9YP18
HG00642_chrY	CAT	exon	25165200	25165420	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=exon:HG00642_ch_T0001751:0;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25165421	25167223	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=intron:HG00642_ch_T0001751:0;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25167224	25167339	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=exon:HG00642_ch_T0001751:1;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25167340	25169125	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=intron:HG00642_ch_T0001751:1;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25169126	25169314	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=exon:HG00642_ch_T0001751:2;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25169315	25171672	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=intron:HG00642_ch_T0001751:2;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25171673	25171802	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=exon:HG00642_ch_T0001751:3;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25171803	25173517	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=intron:HG00642_ch_T0001751:3;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25173518	25173556	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1;transcript_id=HG00642_ch_T0001751;gene_id=HG00642_ch_G0000631;Parent=HG00642_ch_T0001751;transcript_name=HG00642_ch_T0001751;gene_name=USP9YP18;ID=exon:HG00642_ch_T0001751:4;Name=USP9YP18;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25173964	25175183	.	+	.	source_gene_common_name=HSFY6P;source_gene=ENSG00000224169.1;alternative_source_transcripts=ENST00000445573.1;gene_id=HG00642_ch_G0000632;gene_biotype=unprocessed_pseudogene;gene_name=HSFY6P;gene_sources=liftoff;ID=HG00642_ch_G0000632;Name=HSFY6P
HG00642_chrY	CAT	transcript	25173964	25175183	1000	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_G0000632;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=HG00642_ch_T0001752;Name=HSFY6P
HG00642_chrY	CAT	exon	25173964	25174047	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_T0001752;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=exon:HG00642_ch_T0001752:0;Name=HSFY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25174048	25174379	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_T0001752;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=intron:HG00642_ch_T0001752:0;Name=HSFY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25174380	25174539	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_T0001752;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=exon:HG00642_ch_T0001752:1;Name=HSFY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25174540	25175024	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_T0001752;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=intron:HG00642_ch_T0001752:1;Name=HSFY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25175025	25175183	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1;transcript_id=HG00642_ch_T0001752;gene_id=HG00642_ch_G0000632;Parent=HG00642_ch_T0001752;transcript_name=HG00642_ch_T0001752;gene_name=HSFY6P;ID=exon:HG00642_ch_T0001752:2;Name=HSFY6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25192233	25195399	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;alternative_source_transcripts=ENST00000729927.1;gene_id=HG00642_ch_G0000633;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00642_ch_G0000633;Name=ENSG00000295422
HG00642_chrY	CAT	transcript	25192233	25195399	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_G0000633;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=HG00642_ch_T0001753;Name=ENSG00000295422
HG00642_chrY	CAT	exon	25192233	25193575	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_T0001753;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001753:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25193576	25195110	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_T0001753;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001753:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25195111	25195171	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_T0001753;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001753:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25195172	25195288	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_T0001753;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001753:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25195289	25195399	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG00642_ch_T0001753;gene_id=HG00642_ch_G0000633;Parent=HG00642_ch_T0001753;transcript_name=HG00642_ch_T0001753;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001753:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25218153	25468303	.	-	.	source_gene_common_name=ENSG00000305624;source_gene=ENSG00000305624.1;gene_id=HG00642_ch_G0000634;gene_biotype=lncRNA;gene_name=ENSG00000305624;gene_sources=liftoff;ID=HG00642_ch_G0000634;Name=ENSG00000305624
HG00642_chrY	CAT	transcript	25218153	25389143	1000	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=HG00642_ch_T0001754;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25218153	25218413	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001754:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218414	25226771	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001754:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001754:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001754:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001754:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001754:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001754:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001754:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389143	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001754;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001754;transcript_name=HG00642_ch_T0001754;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001754:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25218457	25389082	1000	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=HG00642_ch_T0001756;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25218457	25218794	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001756:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218795	25226771	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001756:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001756:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001756:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001756:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001756:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001756:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001756:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389082	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001756;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001756;transcript_name=HG00642_ch_T0001756;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001756:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25218457	25389064	1000	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=HG00642_ch_T0001757;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25218457	25218794	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218795	25226771	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001757:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001757:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001757:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25376177	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001757:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25376178	25376194	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25376195	25388912	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001757:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389064	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001757;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001757;transcript_name=HG00642_ch_T0001757;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001757:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25218457	25397776	1000	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=HG00642_ch_T0001758;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25218457	25218794	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001758:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218795	25226771	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001758:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001758:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001758:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001758:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001758:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001758:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25397381	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001758:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25397382	25397776	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001758;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001758;transcript_name=HG00642_ch_T0001758;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001758:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25222679	25389090	1000	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=HG00642_ch_T0001759;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25222679	25222896	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001759:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25222897	25226771	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001759:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001759:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001759:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001759:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001759:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001759:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001759:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389090	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001759;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001759;transcript_name=HG00642_ch_T0001759;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001759:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25222679	25389006	1000	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=HG00642_ch_T0001760;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25222679	25222896	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25222897	25226771	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001760:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001760:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001760:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25376177	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001760:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25376178	25376194	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25376195	25388912	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001760:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389006	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001760;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001760;transcript_name=HG00642_ch_T0001760;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001760:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25226814	25468303	1000	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=HG00642_ch_T0001761;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25226814	25226872	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246211	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246212	25246322	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25370490	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25440328	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25440329	25440370	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25440371	25441470	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25441471	25441583	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25441584	25441671	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25441672	25441861	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25441862	25443831	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25443832	25444035	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:6;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25444036	25453452	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:6;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25453453	25453542	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:7;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25453543	25468160	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001761:7;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25468161	25468303	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001761;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001761;transcript_name=HG00642_ch_T0001761;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001761:8;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25300697	25389064	1000	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=HG00642_ch_T0001768;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25300697	25300875	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25300876	25307453	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25307454	25307548	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25307549	25307658	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25307659	25307804	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25307805	25307890	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25307891	25308006	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25308007	25332684	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25332685	25332728	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25332729	25370490	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001768:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389064	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001768;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001768;transcript_name=HG00642_ch_T0001768;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001768:6;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25300697	25389080	1000	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=HG00642_ch_T0001769;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25300697	25300875	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001769;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001769:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25300876	25370490	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001769;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001769:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001769;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001769:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001769;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001769:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389080	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001769;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001769;transcript_name=HG00642_ch_T0001769;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001769:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25330388	25397770	1000	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=HG00642_ch_T0001771;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25330388	25331066	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001771:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25331067	25332684	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001771:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25332685	25332728	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001771:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25332729	25360423	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001771:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25360424	25360870	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001771:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25360871	25370490	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001771:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001771:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25397381	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001771:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25397382	25397770	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001771;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001771;transcript_name=HG00642_ch_T0001771;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001771:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25332314	25389068	1000	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=HG00642_ch_T0001772;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25332314	25332728	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001772:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25332729	25360743	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001772:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25360744	25360870	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001772:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25360871	25370490	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001772:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001772:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001772:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389068	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001772;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001772;transcript_name=HG00642_ch_T0001772;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001772:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25368020	25389108	1000	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=HG00642_ch_T0001774;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25368020	25368646	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001774;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001774:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25368647	25370490	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001774;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001774:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001774;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001774:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25388912	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001774;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001774:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389108	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001774;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001774;transcript_name=HG00642_ch_T0001774;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001774:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25368020	25389063	1000	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_G0000634;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=HG00642_ch_T0001775;Name=ENSG00000305624
HG00642_chrY	CAT	exon	25368020	25368646	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001775:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25368647	25370490	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001775:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370563	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001775:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25370564	25376177	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001775:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25376178	25376194	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001775:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25376195	25388912	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=intron:HG00642_ch_T0001775:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25388913	25389063	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00642_ch_T0001775;gene_id=HG00642_ch_G0000634;Parent=HG00642_ch_T0001775;transcript_name=HG00642_ch_T0001775;gene_name=ENSG00000305624;ID=exon:HG00642_ch_T0001775:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25218382	25251427	.	-	.	source_gene_common_name=OFD1P10Y;source_gene=ENSG00000225466.1;gene_id=HG00642_ch_G0000635;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P10Y;gene_sources=liftoff;ID=HG00642_ch_G0000635;Name=OFD1P10Y
HG00642_chrY	CAT	transcript	25218382	25251427	1000	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_G0000635;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=HG00642_ch_T0001755;Name=OFD1P10Y
HG00642_chrY	CAT	exon	25218382	25218413	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218414	25218712	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25218713	25218794	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25218795	25219982	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25219983	25220137	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25220138	25226771	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25226772	25226872	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25226873	25246217	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246218	25246322	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25246323	25246695	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25246696	25247311	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25247312	25249028	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25249029	25249138	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25249139	25249674	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25249675	25249799	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25249800	25251320	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=intron:HG00642_ch_T0001755:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25251321	25251427	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG00642_ch_T0001755;gene_id=HG00642_ch_G0000635;Parent=HG00642_ch_T0001755;transcript_name=HG00642_ch_T0001755;gene_name=OFD1P10Y;ID=exon:HG00642_ch_T0001755:8;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25272411	25277868	.	+	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;alternative_source_transcripts=ENST00000812264.1;gene_id=HG00642_ch_G0000636;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG00642_ch_G0000636;Name=ENSG00000305658
HG00642_chrY	CAT	transcript	25272411	25277868	1000	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_G0000636;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=HG00642_ch_T0001762;Name=ENSG00000305658
HG00642_chrY	CAT	exon	25272411	25272749	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001762:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25272750	25274669	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001762:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25274670	25274803	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001762:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25274804	25276671	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001762:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25276672	25276798	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001762:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25276799	25277162	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=intron:HG00642_ch_T0001762:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25277163	25277868	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00642_ch_T0001762;gene_id=HG00642_ch_G0000636;Parent=HG00642_ch_T0001762;transcript_name=HG00642_ch_T0001762;gene_name=ENSG00000305658;ID=exon:HG00642_ch_T0001762:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25281642	25283218	.	-	.	source_gene_common_name=ENSG00000236647;source_gene=ENSG00000236647.1;alternative_source_transcripts=ENST00000444014.1;gene_id=HG00642_ch_G0000637;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236647;gene_sources=liftoff;ID=HG00642_ch_G0000637;Name=ENSG00000236647
HG00642_chrY	CAT	transcript	25281642	25283218	1000	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_G0000637;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=HG00642_ch_T0001763;Name=ENSG00000236647
HG00642_chrY	CAT	exon	25281642	25281717	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=exon:HG00642_ch_T0001763:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25281718	25281834	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=intron:HG00642_ch_T0001763:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25281835	25281974	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=exon:HG00642_ch_T0001763:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25281975	25282069	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=intron:HG00642_ch_T0001763:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25282070	25282144	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=exon:HG00642_ch_T0001763:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25282145	25282373	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=intron:HG00642_ch_T0001763:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25282374	25282412	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=exon:HG00642_ch_T0001763:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25282413	25282876	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=intron:HG00642_ch_T0001763:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25282877	25283218	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1;transcript_id=HG00642_ch_T0001763;gene_id=HG00642_ch_G0000637;Parent=HG00642_ch_T0001763;transcript_name=HG00642_ch_T0001763;gene_name=ENSG00000236647;ID=exon:HG00642_ch_T0001763:4;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25284083	25293930	.	+	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;gene_id=HG00642_ch_G0000638;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=HG00642_ch_G0000638;Name=ENSG00000293249
HG00642_chrY	CAT	transcript	25284083	25293930	1000	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_G0000638;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=HG00642_ch_T0001764;Name=ENSG00000293249
HG00642_chrY	CAT	exon	25284083	25284232	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25284233	25284986	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25284987	25285066	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25285067	25286080	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286081	25286193	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286194	25286646	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286647	25286750	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286751	25289459	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25289460	25289637	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25289638	25291572	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25291573	25291725	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25291726	25293732	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001764:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25293733	25293930	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001764;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001764;transcript_name=HG00642_ch_T0001764;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001764:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25284102	25292563	1000	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_G0000638;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=HG00642_ch_T0001765;Name=ENSG00000293249
HG00642_chrY	CAT	exon	25284102	25284232	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25284233	25284986	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25284987	25285066	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25285067	25286080	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286081	25286193	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286194	25286646	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286647	25286750	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286751	25289459	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25289460	25289637	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25289638	25291572	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25291573	25291725	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25291726	25292303	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001765:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25292304	25292563	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001765;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001765;transcript_name=HG00642_ch_T0001765;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001765:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25284111	25292563	1000	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_G0000638;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=HG00642_ch_T0001766;Name=ENSG00000293249
HG00642_chrY	CAT	exon	25284111	25284232	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25284233	25284883	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25284884	25285066	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25285067	25286080	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286081	25286193	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286194	25286646	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286647	25286750	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286751	25289459	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25289460	25289637	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25289638	25291572	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25291573	25291725	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25291726	25292303	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=intron:HG00642_ch_T0001766:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25292304	25292563	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG00642_ch_T0001766;gene_id=HG00642_ch_G0000638;Parent=HG00642_ch_T0001766;transcript_name=HG00642_ch_T0001766;gene_name=ENSG00000293249;ID=exon:HG00642_ch_T0001766:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25286085	25295720	.	+	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11;gene_id=HG00642_ch_G0000639;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=HG00642_ch_G0000639;Name=RBMY2CP
HG00642_chrY	CAT	transcript	25286085	25295720	1000	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_G0000639;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=HG00642_ch_T0001767;Name=RBMY2CP
HG00642_chrY	CAT	exon	25286085	25286193	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286194	25286646	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25286647	25286750	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25286751	25289459	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25289460	25289637	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25289638	25291572	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25291573	25291725	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25291726	25293732	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25293733	25293847	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25293848	25294716	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25294717	25294827	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25294828	25294909	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25294910	25294997	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25294998	25295421	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=intron:HG00642_ch_T0001767:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25295422	25295720	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00642_ch_T0001767;gene_id=HG00642_ch_G0000639;Parent=HG00642_ch_T0001767;transcript_name=HG00642_ch_T0001767;gene_name=RBMY2CP;ID=exon:HG00642_ch_T0001767:7;Name=RBMY2CP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25307659	25309707	.	-	.	source_gene_common_name=ENSG00000230073;source_gene=ENSG00000230073.1;gene_id=HG00642_ch_G0000640;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000230073;gene_sources=liftoff;ID=HG00642_ch_G0000640;Name=ENSG00000230073
HG00642_chrY	CAT	transcript	25307659	25309707	1000	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_G0000640;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=HG00642_ch_T0001770;Name=ENSG00000230073
HG00642_chrY	CAT	exon	25307659	25307802	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=exon:HG00642_ch_T0001770:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25307803	25307894	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=intron:HG00642_ch_T0001770:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25307895	25308018	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=exon:HG00642_ch_T0001770:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25308019	25308218	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=intron:HG00642_ch_T0001770:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25308219	25308275	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=exon:HG00642_ch_T0001770:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25308276	25309305	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=intron:HG00642_ch_T0001770:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25309306	25309707	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00642_ch_T0001770;gene_id=HG00642_ch_G0000640;Parent=HG00642_ch_T0001770;transcript_name=HG00642_ch_T0001770;gene_name=ENSG00000230073;ID=exon:HG00642_ch_T0001770:3;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25360744	25370561	.	-	.	source_gene_common_name=REREP1Y;source_gene=ENSG00000225189.1;gene_id=HG00642_ch_G0000641;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG00642_ch_G0000641;Name=REREP1Y
HG00642_chrY	CAT	transcript	25360744	25370561	1000	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00642_ch_T0001773;gene_id=HG00642_ch_G0000641;Parent=HG00642_ch_G0000641;transcript_name=HG00642_ch_T0001773;gene_name=REREP1Y;ID=HG00642_ch_T0001773;Name=REREP1Y
HG00642_chrY	CAT	exon	25360744	25360870	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00642_ch_T0001773;gene_id=HG00642_ch_G0000641;Parent=HG00642_ch_T0001773;transcript_name=HG00642_ch_T0001773;gene_name=REREP1Y;ID=exon:HG00642_ch_T0001773:0;Name=REREP1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25360871	25370490	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00642_ch_T0001773;gene_id=HG00642_ch_G0000641;Parent=HG00642_ch_T0001773;transcript_name=HG00642_ch_T0001773;gene_name=REREP1Y;ID=intron:HG00642_ch_T0001773:0;Name=REREP1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25370491	25370561	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00642_ch_T0001773;gene_id=HG00642_ch_G0000641;Parent=HG00642_ch_T0001773;transcript_name=HG00642_ch_T0001773;gene_name=REREP1Y;ID=exon:HG00642_ch_T0001773:1;Name=REREP1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25397020	25397121	.	-	.	source_gene_common_name=ENSG00000286744;source_gene=ENSG00000286744.1;alternative_source_transcripts=ENST00000662956.1;gene_id=HG00642_ch_G0000642;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000286744;gene_sources=liftoff;ID=HG00642_ch_G0000642;Name=ENSG00000286744
HG00642_chrY	CAT	transcript	25397020	25397121	1000	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=HG00642_ch_T0001776;gene_id=HG00642_ch_G0000642;Parent=HG00642_ch_G0000642;transcript_name=HG00642_ch_T0001776;gene_name=ENSG00000286744;ID=HG00642_ch_T0001776;Name=ENSG00000286744
HG00642_chrY	CAT	exon	25397020	25397121	.	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=HG00642_ch_T0001776;gene_id=HG00642_ch_G0000642;Parent=HG00642_ch_T0001776;transcript_name=HG00642_ch_T0001776;gene_name=ENSG00000286744;ID=exon:HG00642_ch_T0001776:0;Name=ENSG00000286744;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25409790	25409927	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251925.1;alternative_source_transcripts=ENST00000516116.1;gene_id=HG00642_ch_G0000643;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG00642_ch_G0000643;Name=SNORA70
HG00642_chrY	CAT	transcript	25409790	25409927	1000	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=HG00642_ch_T0001777;gene_id=HG00642_ch_G0000643;Parent=HG00642_ch_G0000643;transcript_name=HG00642_ch_T0001777;gene_name=SNORA70;ID=HG00642_ch_T0001777;Name=SNORA70
HG00642_chrY	CAT	exon	25409790	25409927	.	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=HG00642_ch_T0001777;gene_id=HG00642_ch_G0000643;Parent=HG00642_ch_T0001777;transcript_name=HG00642_ch_T0001777;gene_name=SNORA70;ID=exon:HG00642_ch_T0001777:0;Name=SNORA70;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25440329	25453542	.	-	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3;gene_id=HG00642_ch_G0000644;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=HG00642_ch_G0000644;Name=PPP1R12BP2
HG00642_chrY	CAT	transcript	25440329	25453542	1000	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_G0000644;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=HG00642_ch_T0001778;Name=PPP1R12BP2
HG00642_chrY	CAT	exon	25440329	25440370	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=exon:HG00642_ch_T0001778:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25440371	25441470	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=intron:HG00642_ch_T0001778:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25441471	25441583	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=exon:HG00642_ch_T0001778:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25441584	25441671	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=intron:HG00642_ch_T0001778:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25441672	25441861	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=exon:HG00642_ch_T0001778:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25441862	25443831	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=intron:HG00642_ch_T0001778:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25443832	25444035	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=exon:HG00642_ch_T0001778:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25444036	25453452	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=intron:HG00642_ch_T0001778:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25453453	25453542	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00642_ch_T0001778;gene_id=HG00642_ch_G0000644;Parent=HG00642_ch_T0001778;transcript_name=HG00642_ch_T0001778;gene_name=PPP1R12BP2;ID=exon:HG00642_ch_T0001778:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25541657	25601622	.	-	.	source_gene_common_name=DAZ4;source_gene=ENSG00000205916.12;gene_id=HG00642_ch_G0000645;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG00642_ch_G0000645;Name=DAZ4
HG00642_chrY	CAT	transcript	25541657	25601622	100	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=HG00642_ch_T0001779;Name=DAZ4
HG00642_chrY	CAT	exon	25541657	25543513	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001779;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25560080	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25560081	25560152	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25560081	25560152	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25560153	25564849	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25564850	25564921	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25564850	25564921	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25564922	25567233	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25567234	25567305	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25567234	25567305	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25567306	25581796	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25588965	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25601335	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=intron:HG00642_ch_T0001779:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601622	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=exon:HG00642_ch_T0001779:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001779:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001779;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001779;transcript_name=HG00642_ch_T0001779;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001779;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25541657	25601546	100	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=HG00642_ch_T0001780;Name=DAZ4
HG00642_chrY	CAT	exon	25541657	25543513	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001780;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25555312	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25555313	25555384	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25555313	25555384	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25555385	25557696	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25557697	25557768	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25557697	25557768	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25557769	25560080	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25560081	25560152	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25560081	25560152	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25560153	25564849	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25564850	25564921	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25564850	25564921	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25564922	25567233	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25567234	25567305	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25567234	25567305	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25567306	25577023	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25577024	25577095	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25577024	25577095	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25577096	25579400	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25579401	25579472	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25579401	25579472	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25579473	25581796	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25584178	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25584179	25584250	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25584179	25584250	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25584251	25586574	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25586575	25586646	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25586575	25586646	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25586647	25588965	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25592881	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25592882	25593021	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25592882	25593021	.	-	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593022	25593110	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593111	25593174	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:17;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593111	25593174	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593175	25593610	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:17;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593611	25593662	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:18;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593611	25593662	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:17;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593663	25594222	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:18;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594223	25594314	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:19;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594223	25594314	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:18;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594315	25594588	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:19;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594589	25594735	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:20;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594589	25594735	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:19;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594736	25601335	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=intron:HG00642_ch_T0001780:20;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601546	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=exon:HG00642_ch_T0001780:21;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001780:20;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001780;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001780;transcript_name=HG00642_ch_T0001780;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001780;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25541661	25601548	100	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=HG00642_ch_T0001781;Name=DAZ4
HG00642_chrY	CAT	exon	25541661	25543513	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001781;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25577023	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25577024	25577095	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25577024	25577095	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25577096	25579400	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25579401	25579472	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25579401	25579472	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25579473	25581796	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25584178	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25584179	25584250	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25584179	25584250	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25584251	25586574	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25586575	25586646	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25586575	25586646	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25586647	25588965	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25601335	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=intron:HG00642_ch_T0001781:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601548	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=exon:HG00642_ch_T0001781:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001781:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001781;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001781;transcript_name=HG00642_ch_T0001781;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001781;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25541661	25601548	100	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=HG00642_ch_T0001782;Name=DAZ4
HG00642_chrY	CAT	exon	25541661	25543513	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001782;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25577023	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25577024	25577095	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25577024	25577095	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25577096	25579400	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25579401	25579472	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25579401	25579472	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25579473	25581796	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25584178	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25584179	25584250	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25584179	25584250	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25584251	25586574	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25586575	25586646	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25586575	25586646	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25586647	25588965	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25592881	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25592882	25593021	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25592882	25593021	.	-	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593022	25593110	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593111	25593174	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593111	25593174	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593175	25593610	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593611	25593662	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593611	25593662	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593663	25594222	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594223	25594314	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594223	25594314	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594315	25594588	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594589	25594735	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594589	25594735	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594736	25601335	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=intron:HG00642_ch_T0001782:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601548	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=exon:HG00642_ch_T0001782:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001782:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001782;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001782;transcript_name=HG00642_ch_T0001782;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001782;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25543014	25601531	9880	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=HG00642_ch_T0001783;Name=DAZ4
HG00642_chrY	CAT	exon	25543014	25543513	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001783;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25555312	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25555313	25555384	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25555313	25555384	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25555385	25557696	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25557697	25557768	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25557697	25557768	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25557769	25560080	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25560081	25560152	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25560081	25560152	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25560153	25564849	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25564850	25564921	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25564850	25564921	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25564922	25567233	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25567234	25567305	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25567234	25567305	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25567306	25577023	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25577024	25577095	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25577024	25577095	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25577096	25579400	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25579401	25579472	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25579401	25579472	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25579473	25581796	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25584178	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25584179	25584250	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25584179	25584250	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25584251	25586574	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25586575	25586646	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25586575	25586646	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25586647	25588965	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25601335	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=intron:HG00642_ch_T0001783:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601531	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=exon:HG00642_ch_T0001783:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001783:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=231.20921739130435;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001783;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001783;transcript_name=HG00642_ch_T0001783;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001783;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25543457	25601338	9840	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_G0000645;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=HG00642_ch_T0001784;Name=DAZ4
HG00642_chrY	CAT	exon	25543457	25543513	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25543514	25547476	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25547477	25547575	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25547512	25547575	.	-	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:0;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25547512	25547514	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=stop_codon:HG00642_ch_T0001784;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25547576	25552148	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552149	25552183	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552149	25552183	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:1;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25552184	25552927	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25552928	25552999	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25552928	25552999	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:2;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25553000	25555312	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25555313	25555384	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25555313	25555384	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:3;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25555385	25577023	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25577024	25577095	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25577024	25577095	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:4;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25577096	25579400	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25579401	25579472	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25579401	25579472	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:5;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25579473	25581796	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25581797	25581868	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25581797	25581868	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:6;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25581869	25584178	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25584179	25584250	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25584179	25584250	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:7;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25584251	25586574	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25586575	25586646	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25586575	25586646	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:8;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25586647	25588965	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25588966	25589037	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25588966	25589037	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:9;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25589038	25591409	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25591410	25591481	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25591410	25591481	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:10;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25591482	25592881	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25592882	25593021	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25592882	25593021	.	-	2	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:11;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593022	25593110	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593111	25593174	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593111	25593174	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:12;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593175	25593610	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25593611	25593662	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25593611	25593662	.	-	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:13;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25593663	25594222	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594223	25594314	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594223	25594314	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:14;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594315	25594588	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25594589	25594735	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25594589	25594735	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:15;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25594736	25601335	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=intron:HG00642_ch_T0001784:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25601336	25601338	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=exon:HG00642_ch_T0001784:17;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25601336	25601338	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=CDS:HG00642_ch_T0001784:16;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25601336	25601338	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=216.78754545454547;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00642_ch_T0001784;gene_id=HG00642_ch_G0000645;Parent=HG00642_ch_T0001784;transcript_name=HG00642_ch_T0001784;gene_name=DAZ4;ID=start_codon:HG00642_ch_T0001784;Name=DAZ4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25622069	25691726	.	+	.	source_gene_common_name=DAZ1;source_gene=ENSG00000188120.16;alternative_source_transcripts=ENST00000540248.5;gene_id=HG00642_ch_G0000646;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=HG00642_ch_G0000646;Name=DAZ1
HG00642_chrY	CAT	transcript	25622069	25691719	100	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_G0000646;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=HG00642_ch_T0001785;Name=DAZ1
HG00642_chrY	CAT	exon	25622069	25622281	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25622279	25622281	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25622279	25622281	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=start_codon:HG00642_ch_T0001785;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25622282	25628880	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25628881	25629027	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25628881	25629027	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629028	25629301	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629302	25629393	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629302	25629393	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629394	25629953	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629954	25630005	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629954	25630005	.	+	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630006	25630441	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630442	25630505	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630442	25630505	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630506	25630594	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630595	25630734	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630595	25630734	.	+	2	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630735	25653823	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25653824	25653895	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25653824	25653895	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25653896	25656268	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25656269	25656340	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25656269	25656340	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25656341	25658659	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25658660	25658731	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25658660	25658731	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25658732	25661055	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25661056	25661127	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25661056	25661127	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25661128	25663438	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25663439	25663510	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25663439	25663510	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25663511	25665834	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25665835	25665906	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25665835	25665906	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25665907	25668211	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25668212	25668283	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25668212	25668283	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25668284	25680382	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25680383	25680454	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25680383	25680454	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25680455	25681198	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25681199	25681233	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25681199	25681233	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25681234	25685806	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25685807	25685905	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25685807	25685870	.	+	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001785:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25685868	25685870	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=stop_codon:HG00642_ch_T0001785;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25685906	25689869	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=intron:HG00642_ch_T0001785:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25689870	25691719	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5;transcript_id=HG00642_ch_T0001785;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001785;transcript_name=HG00642_ch_T0001785;gene_name=DAZ1;ID=exon:HG00642_ch_T0001785:16;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25622071	25691726	100	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_G0000646;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=HG00642_ch_T0001786;Name=DAZ1
HG00642_chrY	CAT	exon	25622071	25622281	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25622279	25622281	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25622279	25622281	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=start_codon:HG00642_ch_T0001786;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25622282	25628880	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25628881	25629027	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25628881	25629027	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629028	25629301	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629302	25629393	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629302	25629393	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629394	25629953	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629954	25630005	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629954	25630005	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630006	25630441	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630442	25630505	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630442	25630505	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630506	25630594	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630595	25630734	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630595	25630734	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630735	25639728	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25639729	25639875	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25639729	25639875	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25639876	25640149	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25640150	25640241	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25640150	25640241	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25640242	25640801	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25640802	25640853	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25640802	25640853	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25640854	25641289	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25641290	25641353	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25641290	25641353	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25641354	25641442	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25641443	25641582	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25641443	25641582	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25641583	25650569	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25650570	25650716	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25650570	25650716	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25650717	25650990	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25650991	25651082	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25650991	25651082	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25651083	25651642	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25651643	25651694	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25651643	25651694	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25651695	25652130	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25652131	25652194	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25652131	25652194	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25652195	25652283	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25652284	25652423	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25652284	25652423	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25652424	25653823	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25653824	25653895	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:16;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25653824	25653895	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:16;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25653896	25656268	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:16;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25656269	25656340	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:17;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25656269	25656340	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:17;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25656341	25658659	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:17;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25658660	25658731	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:18;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25658660	25658731	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:18;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25658732	25661055	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:18;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25661056	25661127	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:19;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25661056	25661127	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:19;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25661128	25663438	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:19;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25663439	25663510	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:20;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25663439	25663510	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:20;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25663511	25665834	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:20;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25665835	25665906	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:21;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25665835	25665906	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:21;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25665907	25668211	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:21;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25668212	25668283	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:22;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25668212	25668283	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:22;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25668284	25677997	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:22;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25677998	25678069	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:23;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25677998	25678069	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:23;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25678070	25680382	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:23;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25680383	25680454	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:24;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25680383	25680454	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:24;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25680455	25681198	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:24;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25681199	25681233	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:25;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25681199	25681233	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:25;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25681234	25685806	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:25;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25685807	25685905	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:26;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25685807	25685870	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001786:26;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25685868	25685870	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=stop_codon:HG00642_ch_T0001786;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25685906	25689869	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=intron:HG00642_ch_T0001786:26;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25689870	25691726	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6;transcript_id=HG00642_ch_T0001786;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001786;transcript_name=HG00642_ch_T0001786;gene_name=DAZ1;ID=exon:HG00642_ch_T0001786:27;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25622071	25690371	100	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_G0000646;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=HG00642_ch_T0001787;Name=DAZ1
HG00642_chrY	CAT	exon	25622071	25622281	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25622279	25622281	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25622279	25622281	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=start_codon:HG00642_ch_T0001787;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25622282	25628880	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25628881	25629027	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25628881	25629027	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629028	25629301	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629302	25629393	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629302	25629393	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25629394	25629953	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25629954	25630005	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25629954	25630005	.	+	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630006	25630441	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630442	25630505	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630442	25630505	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630506	25630594	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25630595	25630734	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25630595	25630734	.	+	2	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25630735	25653823	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:5;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25653824	25653895	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25653824	25653895	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25653896	25656268	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:6;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25656269	25656340	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25656269	25656340	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25656341	25658659	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:7;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25658660	25658731	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25658660	25658731	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25658732	25663438	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:8;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25663439	25663510	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25663439	25663510	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25663511	25668211	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:9;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25668212	25668283	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25668212	25668283	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25668284	25677997	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:10;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25677998	25678069	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25677998	25678069	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25678070	25680382	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:11;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25680383	25680454	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25680383	25680454	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25680455	25681198	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:12;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25681199	25681233	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25681199	25681233	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25681234	25685806	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:13;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25685807	25685905	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25685807	25685870	.	+	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=CDS:HG00642_ch_T0001787:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25685868	25685870	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=stop_codon:HG00642_ch_T0001787;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25685906	25689869	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=intron:HG00642_ch_T0001787:14;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25689870	25690371	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001787;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001787;transcript_name=HG00642_ch_T0001787;gene_name=DAZ1;ID=exon:HG00642_ch_T0001787:15;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25680268	25691718	1000	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_G0000646;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=HG00642_ch_T0001788;Name=DAZ1
HG00642_chrY	CAT	exon	25680268	25680454	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=exon:HG00642_ch_T0001788:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25680455	25681198	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=intron:HG00642_ch_T0001788:0;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25681199	25681233	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=exon:HG00642_ch_T0001788:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25681234	25682798	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=intron:HG00642_ch_T0001788:1;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25682799	25682870	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=exon:HG00642_ch_T0001788:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25682871	25685806	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=intron:HG00642_ch_T0001788:2;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25685807	25685905	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=exon:HG00642_ch_T0001788:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25685906	25689869	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=intron:HG00642_ch_T0001788:3;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25689870	25691718	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00642_ch_T0001788;gene_id=HG00642_ch_G0000646;Parent=HG00642_ch_T0001788;transcript_name=HG00642_ch_T0001788;gene_name=DAZ1;ID=exon:HG00642_ch_T0001788:4;Name=DAZ1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25761861	25763002	.	-	.	source_gene_common_name=ENSG00000278602;source_gene=ENSG00000278602.1;gene_id=HG00642_ch_G0000647;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278602;gene_sources=liftoff;ID=HG00642_ch_G0000647;Name=ENSG00000278602
HG00642_chrY	CAT	transcript	25761861	25763002	1000	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00642_ch_T0001789;gene_id=HG00642_ch_G0000647;Parent=HG00642_ch_G0000647;transcript_name=HG00642_ch_T0001789;gene_name=ENSG00000278602;ID=HG00642_ch_T0001789;Name=ENSG00000278602
HG00642_chrY	CAT	exon	25761861	25762384	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00642_ch_T0001789;gene_id=HG00642_ch_G0000647;Parent=HG00642_ch_T0001789;transcript_name=HG00642_ch_T0001789;gene_name=ENSG00000278602;ID=exon:HG00642_ch_T0001789:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25762385	25762735	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00642_ch_T0001789;gene_id=HG00642_ch_G0000647;Parent=HG00642_ch_T0001789;transcript_name=HG00642_ch_T0001789;gene_name=ENSG00000278602;ID=intron:HG00642_ch_T0001789:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25762736	25763002	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00642_ch_T0001789;gene_id=HG00642_ch_G0000647;Parent=HG00642_ch_T0001789;transcript_name=HG00642_ch_T0001789;gene_name=ENSG00000278602;ID=exon:HG00642_ch_T0001789:1;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25769882	25771157	.	-	.	source_gene_common_name=ZNF736P1Y;source_gene=ENSG00000223978.1;alternative_source_transcripts=ENST00000440402.1;gene_id=HG00642_ch_G0000648;gene_biotype=processed_pseudogene;gene_name=ZNF736P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000648;Name=ZNF736P1Y
HG00642_chrY	CAT	transcript	25769882	25771157	1000	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=HG00642_ch_T0001790;gene_id=HG00642_ch_G0000648;Parent=HG00642_ch_G0000648;transcript_name=HG00642_ch_T0001790;gene_name=ZNF736P1Y;ID=HG00642_ch_T0001790;Name=ZNF736P1Y
HG00642_chrY	CAT	exon	25769882	25771157	.	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=HG00642_ch_T0001790;gene_id=HG00642_ch_G0000648;Parent=HG00642_ch_T0001790;transcript_name=HG00642_ch_T0001790;gene_name=ZNF736P1Y;ID=exon:HG00642_ch_T0001790:0;Name=ZNF736P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25794383	25795452	.	-	.	source_gene_common_name=ENSG00000278197;source_gene=ENSG00000278197.1;gene_id=HG00642_ch_G0000649;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278197;gene_sources=liftoff;ID=HG00642_ch_G0000649;Name=ENSG00000278197
HG00642_chrY	CAT	transcript	25794383	25795452	1000	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00642_ch_T0001791;gene_id=HG00642_ch_G0000649;Parent=HG00642_ch_G0000649;transcript_name=HG00642_ch_T0001791;gene_name=ENSG00000278197;ID=HG00642_ch_T0001791;Name=ENSG00000278197
HG00642_chrY	CAT	exon	25794383	25794904	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00642_ch_T0001791;gene_id=HG00642_ch_G0000649;Parent=HG00642_ch_T0001791;transcript_name=HG00642_ch_T0001791;gene_name=ENSG00000278197;ID=exon:HG00642_ch_T0001791:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25794905	25795225	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00642_ch_T0001791;gene_id=HG00642_ch_G0000649;Parent=HG00642_ch_T0001791;transcript_name=HG00642_ch_T0001791;gene_name=ENSG00000278197;ID=intron:HG00642_ch_T0001791:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25795226	25795452	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00642_ch_T0001791;gene_id=HG00642_ch_G0000649;Parent=HG00642_ch_T0001791;transcript_name=HG00642_ch_T0001791;gene_name=ENSG00000278197;ID=exon:HG00642_ch_T0001791:1;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25803181	25803985	.	-	.	source_gene_common_name=ZNF736P5Y;source_gene=ENSG00000230819.1;gene_id=HG00642_ch_G0000650;gene_biotype=processed_pseudogene;gene_name=ZNF736P5Y;gene_sources=liftoff;ID=HG00642_ch_G0000650;Name=ZNF736P5Y
HG00642_chrY	CAT	transcript	25803181	25803985	1000	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=HG00642_ch_T0001792;gene_id=HG00642_ch_G0000650;Parent=HG00642_ch_G0000650;transcript_name=HG00642_ch_T0001792;gene_name=ZNF736P5Y;ID=HG00642_ch_T0001792;Name=ZNF736P5Y
HG00642_chrY	CAT	exon	25803181	25803985	.	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=HG00642_ch_T0001792;gene_id=HG00642_ch_G0000650;Parent=HG00642_ch_T0001792;transcript_name=HG00642_ch_T0001792;gene_name=ZNF736P5Y;ID=exon:HG00642_ch_T0001792:0;Name=ZNF736P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25815583	25847230	.	-	.	source_gene_common_name=BPY2C;source_gene=ENSG00000185894.8;gene_id=HG00642_ch_G0000651;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG00642_ch_G0000651;Name=BPY2C
HG00642_chrY	CAT	transcript	25815583	25836786	10000	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_G0000651;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=HG00642_ch_T0001793;Name=BPY2C
HG00642_chrY	CAT	exon	25815583	25815904	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25815905	25815998	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25815999	25816123	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25816124	25822673	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25822674	25822798	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25822780	25822798	.	-	1	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001793:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25822780	25822782	.	-	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=stop_codon:HG00642_ch_T0001793;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25822799	25823490	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25823491	25823596	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25823491	25823596	.	-	2	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001793:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25823597	25826450	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25826451	25826568	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:4;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25826451	25826568	.	-	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001793:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25826569	25828627	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:4;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25828628	25828746	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:5;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25828628	25828705	.	-	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001793:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25828703	25828705	.	-	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=start_codon:HG00642_ch_T0001793;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25828747	25833155	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:5;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25833156	25833292	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:6;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25833293	25836357	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:6;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836358	25836480	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:7;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25836481	25836755	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=intron:HG00642_ch_T0001793:7;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836756	25836786	.	-	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001793;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001793;transcript_name=HG00642_ch_T0001793;gene_name=BPY2C;ID=exon:HG00642_ch_T0001793:8;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25815642	25836762	1000	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_G0000651;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=HG00642_ch_T0001794;Name=BPY2C
HG00642_chrY	CAT	exon	25815642	25815904	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25815905	25815993	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25815994	25816123	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25816124	25822673	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25822674	25822798	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25822799	25823490	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25823491	25823596	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25823597	25828627	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25828628	25828746	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:4;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25828747	25833155	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:4;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25833156	25833292	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:5;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25833293	25836357	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:5;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836358	25836480	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:6;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25836481	25836755	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=intron:HG00642_ch_T0001794:6;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836756	25836762	.	-	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001794;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001794;transcript_name=HG00642_ch_T0001794;gene_name=BPY2C;ID=exon:HG00642_ch_T0001794:7;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25822780	25828705	10000	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_G0000651;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=HG00642_ch_T0001795;Name=BPY2C
HG00642_chrY	CAT	exon	25822780	25822798	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=exon:HG00642_ch_T0001795:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25822780	25822798	.	-	1	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001795:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25822780	25822782	.	-	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=stop_codon:HG00642_ch_T0001795;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25822799	25823490	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=intron:HG00642_ch_T0001795:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25823491	25823596	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=exon:HG00642_ch_T0001795:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25823491	25823596	.	-	2	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001795:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25823597	25826450	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=intron:HG00642_ch_T0001795:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25826451	25826568	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=exon:HG00642_ch_T0001795:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25826451	25826568	.	-	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001795:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25826569	25828627	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=intron:HG00642_ch_T0001795:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25828628	25828705	.	-	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=exon:HG00642_ch_T0001795:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25828628	25828705	.	-	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001795:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25828703	25828705	.	-	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001795;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001795;transcript_name=HG00642_ch_T0001795;gene_name=BPY2C;ID=start_codon:HG00642_ch_T0001795;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25828673	25847230	10000	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_G0000651;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=HG00642_ch_T0001796;Name=BPY2C
HG00642_chrY	CAT	exon	25828673	25828746	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=exon:HG00642_ch_T0001796:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	25828673	25828705	.	-	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=CDS:HG00642_ch_T0001796:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	25828673	25828675	.	-	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=stop_codon:HG00642_ch_T0001796;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	25828703	25828705	.	-	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=start_codon:HG00642_ch_T0001796;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25828747	25833155	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=intron:HG00642_ch_T0001796:0;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25833156	25833292	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=exon:HG00642_ch_T0001796:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25833293	25836357	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=intron:HG00642_ch_T0001796:1;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836358	25836480	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=exon:HG00642_ch_T0001796:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25836481	25836832	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=intron:HG00642_ch_T0001796:2;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25836833	25836901	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=exon:HG00642_ch_T0001796:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25836902	25847074	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=intron:HG00642_ch_T0001796:3;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25847075	25847230	.	-	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00642_ch_T0001796;gene_id=HG00642_ch_G0000651;Parent=HG00642_ch_T0001796;transcript_name=HG00642_ch_T0001796;gene_name=BPY2C;ID=exon:HG00642_ch_T0001796:4;Name=BPY2C;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25847765	25884562	.	-	.	source_gene_common_name=TTTY4C;source_gene=ENSG00000228296.1;gene_id=HG00642_ch_G0000652;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG00642_ch_G0000652;Name=TTTY4C
HG00642_chrY	CAT	transcript	25847765	25884562	1000	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_G0000652;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=HG00642_ch_T0001797;Name=TTTY4C
HG00642_chrY	CAT	exon	25847765	25848765	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=exon:HG00642_ch_T0001797:0;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25848766	25855415	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=intron:HG00642_ch_T0001797:0;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25855416	25855523	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=exon:HG00642_ch_T0001797:1;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25855524	25857327	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=intron:HG00642_ch_T0001797:1;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25857328	25857403	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=exon:HG00642_ch_T0001797:2;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25857404	25884401	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=intron:HG00642_ch_T0001797:2;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25884402	25884562	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00642_ch_T0001797;gene_id=HG00642_ch_G0000652;Parent=HG00642_ch_T0001797;transcript_name=HG00642_ch_T0001797;gene_name=TTTY4C;ID=exon:HG00642_ch_T0001797:3;Name=TTTY4C;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25953269	25954511	.	+	.	source_gene_common_name=ZNF736P4Y;source_gene=ENSG00000236379.2;alternative_source_transcripts=ENST00000454995.1;gene_id=HG00642_ch_G0000653;gene_biotype=processed_pseudogene;gene_name=ZNF736P4Y;gene_sources=liftoff;ID=HG00642_ch_G0000653;Name=ZNF736P4Y
HG00642_chrY	CAT	transcript	25953269	25954511	1000	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG00642_ch_T0001798;gene_id=HG00642_ch_G0000653;Parent=HG00642_ch_G0000653;transcript_name=HG00642_ch_T0001798;gene_name=ZNF736P4Y;ID=HG00642_ch_T0001798;Name=ZNF736P4Y
HG00642_chrY	CAT	exon	25953269	25954511	.	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG00642_ch_T0001798;gene_id=HG00642_ch_G0000653;Parent=HG00642_ch_T0001798;transcript_name=HG00642_ch_T0001798;gene_name=ZNF736P4Y;ID=exon:HG00642_ch_T0001798:0;Name=ZNF736P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25959190	25959907	.	+	.	source_gene_common_name=ENSG00000274899;source_gene=ENSG00000274899.1;gene_id=HG00642_ch_G0000654;gene_biotype=processed_pseudogene;gene_name=ENSG00000274899;gene_sources=liftoff;ID=HG00642_ch_G0000654;Name=ENSG00000274899
HG00642_chrY	CAT	transcript	25959190	25959907	1000	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00642_ch_T0001799;gene_id=HG00642_ch_G0000654;Parent=HG00642_ch_G0000654;transcript_name=HG00642_ch_T0001799;gene_name=ENSG00000274899;ID=HG00642_ch_T0001799;Name=ENSG00000274899
HG00642_chrY	CAT	exon	25959190	25959462	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00642_ch_T0001799;gene_id=HG00642_ch_G0000654;Parent=HG00642_ch_T0001799;transcript_name=HG00642_ch_T0001799;gene_name=ENSG00000274899;ID=exon:HG00642_ch_T0001799:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25959463	25959765	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00642_ch_T0001799;gene_id=HG00642_ch_G0000654;Parent=HG00642_ch_T0001799;transcript_name=HG00642_ch_T0001799;gene_name=ENSG00000274899;ID=intron:HG00642_ch_T0001799:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25959766	25959907	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00642_ch_T0001799;gene_id=HG00642_ch_G0000654;Parent=HG00642_ch_T0001799;transcript_name=HG00642_ch_T0001799;gene_name=ENSG00000274899;ID=exon:HG00642_ch_T0001799:1;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25966937	25998523	.	-	.	source_gene_common_name=TTTY17C;source_gene=ENSG00000223641.3;alternative_source_transcripts=ENST00000772950.1;gene_id=HG00642_ch_G0000655;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG00642_ch_G0000655;Name=TTTY17C
HG00642_chrY	CAT	transcript	25966937	25998523	1000	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_G0000655;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=HG00642_ch_T0001800;Name=TTTY17C
HG00642_chrY	CAT	exon	25966937	25967257	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25967258	25968257	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001800:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25968258	25968418	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25968419	25969383	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001800:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25969384	25969508	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25969509	25979634	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001800:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25979635	25979751	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25979752	25997989	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001800:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25997990	25998059	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25998060	25998453	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001800:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25998454	25998523	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=HG00642_ch_T0001800;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001800;transcript_name=HG00642_ch_T0001800;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001800:5;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	25966937	25998391	1000	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_G0000655;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=HG00642_ch_T0001801;Name=TTTY17C
HG00642_chrY	CAT	exon	25966937	25967257	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25967258	25968257	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001801:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25968258	25968418	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25968419	25969383	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001801:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25969384	25969508	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25969509	25985273	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001801:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25985274	25985382	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25985383	25997989	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001801:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25997990	25998059	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25998060	25998345	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=intron:HG00642_ch_T0001801:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	25998346	25998391	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=HG00642_ch_T0001801;gene_id=HG00642_ch_G0000655;Parent=HG00642_ch_T0001801;transcript_name=HG00642_ch_T0001801;gene_name=TTTY17C;ID=exon:HG00642_ch_T0001801:5;Name=TTTY17C;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	25998837	26003927	.	+	.	source_gene_common_name=ENSG00000294545;source_gene=ENSG00000294545.1;alternative_source_transcripts=ENST00000724319.1;gene_id=HG00642_ch_G0000656;gene_biotype=lncRNA;gene_name=ENSG00000294545;gene_sources=liftoff;ID=HG00642_ch_G0000656;Name=ENSG00000294545
HG00642_chrY	CAT	transcript	25998837	26003927	1000	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG00642_ch_T0001802;gene_id=HG00642_ch_G0000656;Parent=HG00642_ch_G0000656;transcript_name=HG00642_ch_T0001802;gene_name=ENSG00000294545;ID=HG00642_ch_T0001802;Name=ENSG00000294545
HG00642_chrY	CAT	exon	25998837	25998933	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG00642_ch_T0001802;gene_id=HG00642_ch_G0000656;Parent=HG00642_ch_T0001802;transcript_name=HG00642_ch_T0001802;gene_name=ENSG00000294545;ID=exon:HG00642_ch_T0001802:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	25998934	26003585	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG00642_ch_T0001802;gene_id=HG00642_ch_G0000656;Parent=HG00642_ch_T0001802;transcript_name=HG00642_ch_T0001802;gene_name=ENSG00000294545;ID=intron:HG00642_ch_T0001802:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26003586	26003927	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG00642_ch_T0001802;gene_id=HG00642_ch_G0000656;Parent=HG00642_ch_T0001802;transcript_name=HG00642_ch_T0001802;gene_name=ENSG00000294545;ID=exon:HG00642_ch_T0001802:1;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26048912	26133510	.	+	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;alternative_source_transcripts=ENST00000820371.1;gene_id=HG00642_ch_G0000657;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=HG00642_ch_G0000657;Name=ENSG00000306715
HG00642_chrY	CAT	transcript	26048912	26133510	1000	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_G0000657;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=HG00642_ch_T0001803;Name=ENSG00000306715
HG00642_chrY	CAT	exon	26048912	26049010	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001803:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26049011	26060619	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001803:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26060620	26060727	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001803:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26060728	26075161	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001803:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26075162	26075266	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001803:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26075267	26133098	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001803:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26133099	26133510	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG00642_ch_T0001803;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001803;transcript_name=HG00642_ch_T0001803;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001803:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26048943	26080550	1000	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_G0000657;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=HG00642_ch_T0001804;Name=ENSG00000306715
HG00642_chrY	CAT	exon	26048943	26049010	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001804:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26049011	26060619	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001804:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26060620	26060727	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001804:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26060728	26075161	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001804:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26075162	26075266	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001804:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26075267	26079895	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=intron:HG00642_ch_T0001804:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26079896	26080550	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00642_ch_T0001804;gene_id=HG00642_ch_G0000657;Parent=HG00642_ch_T0001804;transcript_name=HG00642_ch_T0001804;gene_name=ENSG00000306715;ID=exon:HG00642_ch_T0001804:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26051252	26058201	.	+	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1;alternative_source_transcripts=ENST00000423333.1;gene_id=HG00642_ch_G0000658;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=HG00642_ch_G0000658;Name=RBMY2YP
HG00642_chrY	CAT	transcript	26051252	26058201	1000	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_G0000658;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=HG00642_ch_T0001805;Name=RBMY2YP
HG00642_chrY	CAT	exon	26051252	26051364	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26051365	26051774	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=intron:HG00642_ch_T0001805:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26051775	26051876	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26051877	26054264	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=intron:HG00642_ch_T0001805:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26054265	26054446	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26054447	26057192	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=intron:HG00642_ch_T0001805:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26057193	26057303	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26057304	26057384	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=intron:HG00642_ch_T0001805:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26057385	26057473	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26057474	26057886	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=intron:HG00642_ch_T0001805:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26057887	26058201	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG00642_ch_T0001805;gene_id=HG00642_ch_G0000658;Parent=HG00642_ch_T0001805;transcript_name=HG00642_ch_T0001805;gene_name=RBMY2YP;ID=exon:HG00642_ch_T0001805:5;Name=RBMY2YP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26092399	26092473	.	+	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2;alternative_source_transcripts=ENST00000624491.2;gene_id=HG00642_ch_G0000659;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=HG00642_ch_G0000659;Name=ENSG00000279115
HG00642_chrY	CAT	transcript	26092399	26092473	1000	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=HG00642_ch_T0001806;gene_id=HG00642_ch_G0000659;Parent=HG00642_ch_G0000659;transcript_name=HG00642_ch_T0001806;gene_name=ENSG00000279115;ID=HG00642_ch_T0001806;Name=ENSG00000279115
HG00642_chrY	CAT	exon	26092399	26092473	.	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=HG00642_ch_T0001806;gene_id=HG00642_ch_G0000659;Parent=HG00642_ch_T0001806;transcript_name=HG00642_ch_T0001806;gene_name=ENSG00000279115;ID=exon:HG00642_ch_T0001806:0;Name=ENSG00000279115;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26162212	26179376	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=ENSG00000228786.7;alternative_source_transcripts=ENST00000427373.6;gene_id=HG00642_ch_G0000660;gene_biotype=lncRNA;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG00642_ch_G0000660;Name=SEPTIN14P23
HG00642_chrY	CAT	transcript	26162212	26179376	1000	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_G0000660;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=HG00642_ch_T0001807;Name=SEPTIN14P23
HG00642_chrY	CAT	exon	26162212	26163533	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_T0001807;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=exon:HG00642_ch_T0001807:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26163534	26171571	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_T0001807;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=intron:HG00642_ch_T0001807:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26171572	26171740	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_T0001807;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=exon:HG00642_ch_T0001807:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26171741	26179282	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_T0001807;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=intron:HG00642_ch_T0001807:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26179283	26179376	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=HG00642_ch_T0001807;gene_id=HG00642_ch_G0000660;Parent=HG00642_ch_T0001807;transcript_name=HG00642_ch_T0001807;gene_name=SEPTIN14P23;ID=exon:HG00642_ch_T0001807:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26173647	26176466	.	+	.	source_gene_common_name=CICP1;source_gene=ENSG00000233652.1;alternative_source_transcripts=ENST00000416803.1;gene_id=HG00642_ch_G0000661;gene_biotype=processed_pseudogene;gene_name=CICP1;gene_sources=liftoff;ID=HG00642_ch_G0000661;Name=CICP1
HG00642_chrY	CAT	transcript	26173647	26176466	1000	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1;transcript_id=HG00642_ch_T0001808;gene_id=HG00642_ch_G0000661;Parent=HG00642_ch_G0000661;transcript_name=HG00642_ch_T0001808;gene_name=CICP1;ID=HG00642_ch_T0001808;Name=CICP1
HG00642_chrY	CAT	exon	26173647	26175929	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1;transcript_id=HG00642_ch_T0001808;gene_id=HG00642_ch_G0000661;Parent=HG00642_ch_T0001808;transcript_name=HG00642_ch_T0001808;gene_name=CICP1;ID=exon:HG00642_ch_T0001808:0;Name=CICP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26175930	26176339	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1;transcript_id=HG00642_ch_T0001808;gene_id=HG00642_ch_G0000661;Parent=HG00642_ch_T0001808;transcript_name=HG00642_ch_T0001808;gene_name=CICP1;ID=intron:HG00642_ch_T0001808:0;Name=CICP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26176340	26176466	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1;transcript_id=HG00642_ch_T0001808;gene_id=HG00642_ch_G0000661;Parent=HG00642_ch_T0001808;transcript_name=HG00642_ch_T0001808;gene_name=CICP1;ID=exon:HG00642_ch_T0001808:1;Name=CICP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26177810	26178713	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;alternative_source_transcripts=ENST00000447588.1;gene_id=HG00642_ch_G0000662;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=liftoff;ID=HG00642_ch_G0000662;Name=LINC00265-3P
HG00642_chrY	CAT	transcript	26177810	26178713	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;alternative_source_transcripts=ENST00000447588.1;transcript_id=HG00642_ch_T0001809;gene_id=HG00642_ch_G0000662;Parent=HG00642_ch_G0000662;transcript_name=HG00642_ch_T0001809;gene_name=LINC00265-3P;ID=HG00642_ch_T0001809;Name=LINC00265-3P
HG00642_chrY	CAT	exon	26177810	26178713	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;alternative_source_transcripts=ENST00000447588.1;transcript_id=HG00642_ch_T0001809;gene_id=HG00642_ch_G0000662;Parent=HG00642_ch_T0001809;transcript_name=HG00642_ch_T0001809;gene_name=LINC00265-3P;ID=exon:HG00642_ch_T0001809:0;Name=LINC00265-3P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26215812	26221971	.	+	.	source_gene_common_name=UBE2Q2P5Y;source_gene=ENSG00000223636.1;alternative_source_transcripts=ENST00000413867.1;gene_id=HG00642_ch_G0000663;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P5Y;gene_sources=liftoff;ID=HG00642_ch_G0000663;Name=UBE2Q2P5Y
HG00642_chrY	CAT	transcript	26215812	26221971	1000	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG00642_ch_T0001810;gene_id=HG00642_ch_G0000663;Parent=HG00642_ch_G0000663;transcript_name=HG00642_ch_T0001810;gene_name=UBE2Q2P5Y;ID=HG00642_ch_T0001810;Name=UBE2Q2P5Y
HG00642_chrY	CAT	exon	26215812	26215913	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG00642_ch_T0001810;gene_id=HG00642_ch_G0000663;Parent=HG00642_ch_T0001810;transcript_name=HG00642_ch_T0001810;gene_name=UBE2Q2P5Y;ID=exon:HG00642_ch_T0001810:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26215914	26221866	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG00642_ch_T0001810;gene_id=HG00642_ch_G0000663;Parent=HG00642_ch_T0001810;transcript_name=HG00642_ch_T0001810;gene_name=UBE2Q2P5Y;ID=intron:HG00642_ch_T0001810:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26221867	26221971	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG00642_ch_T0001810;gene_id=HG00642_ch_G0000663;Parent=HG00642_ch_T0001810;transcript_name=HG00642_ch_T0001810;gene_name=UBE2Q2P5Y;ID=exon:HG00642_ch_T0001810:1;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26239217	26245228	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=ENSG00000172297.7;gene_id=HG00642_ch_G0000664;gene_biotype=unprocessed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff,transMap_pairwise;ID=HG00642_ch_G0000664;Name=GOLGA2P3Y
HG00642_chrY	CAT	transcript	26239217	26245228	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_G0000664;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=HG00642_ch_T0001811;Name=GOLGA2P3Y
HG00642_chrY	CAT	exon	26239217	26239336	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26239337	26239949	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26239950	26240009	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26240010	26240195	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26240196	26240274	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26240275	26241393	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26241394	26241743	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26241744	26242041	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26242042	26242099	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26242100	26243129	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243130	26243530	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26243531	26243950	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243951	26244039	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244040	26244294	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244295	26244483	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244484	26244572	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244573	26244665	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244666	26244747	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244748	26244838	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244839	26244920	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244921	26245076	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26245077	26245166	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001811:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26245167	26245228	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001811;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001811;transcript_name=HG00642_ch_T0001811;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001811:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26239217	26245228	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_G0000664;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=HG00642_ch_T0001812;Name=GOLGA2P3Y
HG00642_chrY	CAT	exon	26239217	26239336	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26239337	26239949	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26239950	26240009	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26240010	26240195	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26240196	26240274	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26240275	26241393	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26241394	26241743	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26241744	26242041	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26242042	26242099	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26242100	26243129	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243130	26243199	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26243200	26243218	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243219	26243379	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26243380	26243455	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243456	26243530	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26243531	26243950	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26243951	26244039	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244040	26244294	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244295	26244483	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244484	26244572	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244573	26244665	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244666	26244747	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244748	26244838	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26244839	26244920	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26244921	26245076	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26245077	26245166	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=intron:HG00642_ch_T0001812:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26245167	26245228	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00642_ch_T0001812;gene_id=HG00642_ch_G0000664;Parent=HG00642_ch_T0001812;transcript_name=HG00642_ch_T0001812;gene_name=GOLGA2P3Y;ID=exon:HG00642_ch_T0001812:13;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26243582	26243840	.	+	.	source_gene_common_name=RN7SL725P;source_gene=ENSG00000278242.1;alternative_source_transcripts=ENST00000606439.2;gene_id=HG00642_ch_G0000665;gene_biotype=misc_RNA;gene_name=RN7SL725P;gene_sources=liftoff;ID=HG00642_ch_G0000665;Name=RN7SL725P
HG00642_chrY	CAT	transcript	26243582	26243840	1000	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000606439.2;transcript_id=HG00642_ch_T0001813;gene_id=HG00642_ch_G0000665;Parent=HG00642_ch_G0000665;transcript_name=HG00642_ch_T0001813;gene_name=RN7SL725P;ID=HG00642_ch_T0001813;Name=RN7SL725P
HG00642_chrY	CAT	exon	26243582	26243840	.	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000606439.2;transcript_id=HG00642_ch_T0001813;gene_id=HG00642_ch_G0000665;Parent=HG00642_ch_T0001813;transcript_name=HG00642_ch_T0001813;gene_name=RN7SL725P;ID=exon:HG00642_ch_T0001813:0;Name=RN7SL725P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26248666	26258282	.	+	.	source_gene_common_name=ENSG00000284071;source_gene=ENSG00000284071.1;gene_id=HG00642_ch_G0000666;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284071;gene_sources=liftoff;ID=HG00642_ch_G0000666;Name=ENSG00000284071
HG00642_chrY	CAT	transcript	26248666	26258282	1000	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_G0000666;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=HG00642_ch_T0001814;Name=ENSG00000284071
HG00642_chrY	CAT	exon	26248666	26248750	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_T0001814;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=exon:HG00642_ch_T0001814:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26248751	26250171	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_T0001814;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=intron:HG00642_ch_T0001814:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26250172	26250321	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_T0001814;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=exon:HG00642_ch_T0001814:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26250322	26258120	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_T0001814;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=intron:HG00642_ch_T0001814:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26258121	26258282	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00642_ch_T0001814;gene_id=HG00642_ch_G0000666;Parent=HG00642_ch_T0001814;transcript_name=HG00642_ch_T0001814;gene_name=ENSG00000284071;ID=exon:HG00642_ch_T0001814:2;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26262930	26268291	.	+	.	source_gene_common_name=CSPG4P4Y;source_gene=ENSG00000172294.7;gene_id=HG00642_ch_G0000667;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P4Y;gene_sources=liftoff;ID=HG00642_ch_G0000667;Name=CSPG4P4Y
HG00642_chrY	CAT	transcript	26262930	26268291	1000	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00642_ch_T0001815;gene_id=HG00642_ch_G0000667;Parent=HG00642_ch_G0000667;transcript_name=HG00642_ch_T0001815;gene_name=CSPG4P4Y;ID=HG00642_ch_T0001815;Name=CSPG4P4Y
HG00642_chrY	CAT	exon	26262930	26263093	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00642_ch_T0001815;gene_id=HG00642_ch_G0000667;Parent=HG00642_ch_T0001815;transcript_name=HG00642_ch_T0001815;gene_name=CSPG4P4Y;ID=exon:HG00642_ch_T0001815:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26263094	26264731	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00642_ch_T0001815;gene_id=HG00642_ch_G0000667;Parent=HG00642_ch_T0001815;transcript_name=HG00642_ch_T0001815;gene_name=CSPG4P4Y;ID=intron:HG00642_ch_T0001815:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26264732	26268291	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00642_ch_T0001815;gene_id=HG00642_ch_G0000667;Parent=HG00642_ch_T0001815;transcript_name=HG00642_ch_T0001815;gene_name=CSPG4P4Y;ID=exon:HG00642_ch_T0001815:1;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26267569	26271366	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=ENSG00000240450.1;gene_id=HG00642_ch_G0000668;gene_biotype=lncRNA;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG00642_ch_G0000668;Name=CSPG4P1Y
HG00642_chrY	CAT	transcript	26267569	26271366	1000	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00642_ch_T0001816;gene_id=HG00642_ch_G0000668;Parent=HG00642_ch_G0000668;transcript_name=HG00642_ch_T0001816;gene_name=CSPG4P1Y;ID=HG00642_ch_T0001816;Name=CSPG4P1Y
HG00642_chrY	CAT	exon	26267569	26268291	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00642_ch_T0001816;gene_id=HG00642_ch_G0000668;Parent=HG00642_ch_T0001816;transcript_name=HG00642_ch_T0001816;gene_name=CSPG4P1Y;ID=exon:HG00642_ch_T0001816:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26268292	26271294	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00642_ch_T0001816;gene_id=HG00642_ch_G0000668;Parent=HG00642_ch_T0001816;transcript_name=HG00642_ch_T0001816;gene_name=CSPG4P1Y;ID=intron:HG00642_ch_T0001816:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26271295	26271366	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00642_ch_T0001816;gene_id=HG00642_ch_G0000668;Parent=HG00642_ch_T0001816;transcript_name=HG00642_ch_T0001816;gene_name=CSPG4P1Y;ID=exon:HG00642_ch_T0001816:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26271301	26271983	.	+	.	source_gene_common_name=DNM1P48;source_gene=ENSG00000239304.1;gene_id=HG00642_ch_G0000669;gene_biotype=transcribed_processed_pseudogene;gene_name=DNM1P48;gene_sources=liftoff;ID=HG00642_ch_G0000669;Name=DNM1P48
HG00642_chrY	CAT	transcript	26271301	26271983	1000	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00642_ch_T0001817;gene_id=HG00642_ch_G0000669;Parent=HG00642_ch_G0000669;transcript_name=HG00642_ch_T0001817;gene_name=DNM1P48;ID=HG00642_ch_T0001817;Name=DNM1P48
HG00642_chrY	CAT	exon	26271301	26271526	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00642_ch_T0001817;gene_id=HG00642_ch_G0000669;Parent=HG00642_ch_T0001817;transcript_name=HG00642_ch_T0001817;gene_name=DNM1P48;ID=exon:HG00642_ch_T0001817:0;Name=DNM1P48;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26271527	26271770	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00642_ch_T0001817;gene_id=HG00642_ch_G0000669;Parent=HG00642_ch_T0001817;transcript_name=HG00642_ch_T0001817;gene_name=DNM1P48;ID=intron:HG00642_ch_T0001817:0;Name=DNM1P48;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26271771	26271983	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00642_ch_T0001817;gene_id=HG00642_ch_G0000669;Parent=HG00642_ch_T0001817;transcript_name=HG00642_ch_T0001817;gene_name=DNM1P48;ID=exon:HG00642_ch_T0001817:1;Name=DNM1P48;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26271945	26272323	.	-	.	source_gene_common_name=ENSG00000233619;source_gene=ENSG00000233619.1;alternative_source_transcripts=ENST00000437571.1;gene_id=HG00642_ch_G0000670;gene_biotype=processed_pseudogene;gene_name=ENSG00000233619;gene_sources=liftoff;ID=HG00642_ch_G0000670;Name=ENSG00000233619
HG00642_chrY	CAT	transcript	26271945	26272323	1000	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;alternative_source_transcripts=ENST00000437571.1;transcript_id=HG00642_ch_T0001818;gene_id=HG00642_ch_G0000670;Parent=HG00642_ch_G0000670;transcript_name=HG00642_ch_T0001818;gene_name=ENSG00000233619;ID=HG00642_ch_T0001818;Name=ENSG00000233619
HG00642_chrY	CAT	exon	26271945	26272323	.	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;alternative_source_transcripts=ENST00000437571.1;transcript_id=HG00642_ch_T0001818;gene_id=HG00642_ch_G0000670;Parent=HG00642_ch_T0001818;transcript_name=HG00642_ch_T0001818;gene_name=ENSG00000233619;ID=exon:HG00642_ch_T0001818:0;Name=ENSG00000233619;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26277593	26283176	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=HG00642_ch_G0000671;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=HG00642_ch_G0000671;Name=ENSG00000307363
HG00642_chrY	CAT	transcript	26277593	26283003	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=HG00642_ch_T0001819;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26277593	26280446	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001819:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001819:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001819:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281810	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001819:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281811	26281871	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001819:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282138	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001819:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282139	26283003	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001819;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001819;transcript_name=HG00642_ch_T0001819;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001819:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26279880	26282746	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=HG00642_ch_T0001820;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26279880	26280446	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001820:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001820:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001820:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281793	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001820:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281794	26281871	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001820:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282138	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001820:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282139	26282746	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001820;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001820;transcript_name=HG00642_ch_T0001820;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001820:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280281	26281005	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001821;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001821;gene_name=ENSG00000307363;ID=HG00642_ch_T0001821;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280281	26280446	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001821;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001821;transcript_name=HG00642_ch_T0001821;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001821:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001821;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001821;transcript_name=HG00642_ch_T0001821;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001821:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26281005	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001821;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001821;transcript_name=HG00642_ch_T0001821;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001821:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282156	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=HG00642_ch_T0001822;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001822:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001822:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001822:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281793	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001822:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281794	26281871	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001822:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26281982	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001822:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281983	26282156	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001822;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001822;transcript_name=HG00642_ch_T0001822;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001822:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282471	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=HG00642_ch_T0001823;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001823:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001823:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001823:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001823:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001823:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282309	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001823:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282310	26282471	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001823;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001823;transcript_name=HG00642_ch_T0001823;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001823:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282582	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=HG00642_ch_T0001824;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001824:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001824:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001824:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281810	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001824:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281811	26281871	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001824:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282409	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001824:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282410	26282582	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001824;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001824;transcript_name=HG00642_ch_T0001824;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001824:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282574	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=HG00642_ch_T0001825;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001825:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001825:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001825:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001825:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001825:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282409	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001825:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282410	26282574	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001825;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001825;transcript_name=HG00642_ch_T0001825;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001825:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282156	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=HG00642_ch_T0001826;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001826:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001826:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001826:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001826:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001826:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26281982	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001826:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281983	26282156	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001826;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001826;transcript_name=HG00642_ch_T0001826;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001826:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282250	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=HG00642_ch_T0001827;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001827:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001827:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001827:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281810	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001827:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281811	26281871	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001827:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26281982	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001827:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281983	26282250	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001827;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001827;transcript_name=HG00642_ch_T0001827;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001827:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282373	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=HG00642_ch_T0001828;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001828:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001828:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001828:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001828:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001828:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282138	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001828:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282139	26282373	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001828;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001828;transcript_name=HG00642_ch_T0001828;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001828:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26283176	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=HG00642_ch_T0001829;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001829:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001829:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001829:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001829:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001829:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26283095	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001829:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26283096	26283176	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001829;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001829;transcript_name=HG00642_ch_T0001829;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001829:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282492	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=HG00642_ch_T0001830;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001830:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001830:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001830:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281793	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001830:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281794	26281871	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001830:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282309	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001830:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282310	26282492	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001830;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001830;transcript_name=HG00642_ch_T0001830;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001830:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282492	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=HG00642_ch_T0001831;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001831:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001831:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001831:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281810	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001831:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281811	26281871	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001831:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282309	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001831:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282310	26282492	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001831;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001831;transcript_name=HG00642_ch_T0001831;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001831:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26283162	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=HG00642_ch_T0001832;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001832:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001832:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001832:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281810	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001832:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281811	26281871	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001832:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26283095	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001832:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26283096	26283162	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001832;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001832;transcript_name=HG00642_ch_T0001832;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001832:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280282	26282526	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=HG00642_ch_T0001833;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280282	26280446	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001833:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001833:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001833:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281793	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001833:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281794	26281871	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001833:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282409	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001833:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282410	26282526	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001833;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001833;transcript_name=HG00642_ch_T0001833;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001833:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26280283	26282412	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_G0000671;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=HG00642_ch_T0001834;Name=ENSG00000307363
HG00642_chrY	CAT	exon	26280283	26280446	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001834:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280447	26280655	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001834:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280656	26280770	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001834:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280771	26281632	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001834:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281633	26281871	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001834:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282223	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=intron:HG00642_ch_T0001834:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282224	26282412	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00642_ch_T0001834;gene_id=HG00642_ch_G0000671;Parent=HG00642_ch_T0001834;transcript_name=HG00642_ch_T0001834;gene_name=ENSG00000307363;ID=exon:HG00642_ch_T0001834:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26280314	26286621	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5;gene_id=HG00642_ch_G0000672;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=HG00642_ch_G0000672;Name=GOLGA6L16P
HG00642_chrY	CAT	transcript	26280314	26286621	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_G0000672;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=HG00642_ch_T0001835;Name=GOLGA6L16P
HG00642_chrY	CAT	exon	26280314	26280445	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280446	26280654	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26280655	26280778	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26280779	26281800	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26281801	26281871	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26281872	26282138	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26282139	26282708	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26282709	26283113	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26283114	26283170	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26283171	26283826	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26283827	26283907	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26283908	26284092	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26284093	26284152	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26284153	26284774	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26284775	26284894	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26284895	26286537	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=intron:HG00642_ch_T0001835:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26286538	26286621	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00642_ch_T0001835;gene_id=HG00642_ch_G0000672;Parent=HG00642_ch_T0001835;transcript_name=HG00642_ch_T0001835;gene_name=GOLGA6L16P;ID=exon:HG00642_ch_T0001835:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26296964	26312449	.	-	.	source_gene_common_name=ENSG00000235583;source_gene=ENSG00000235583.2;gene_id=HG00642_ch_G0000673;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235583;gene_sources=liftoff;ID=HG00642_ch_G0000673;Name=ENSG00000235583
HG00642_chrY	CAT	transcript	26296964	26312449	1000	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_G0000673;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=HG00642_ch_T0001836;Name=ENSG00000235583
HG00642_chrY	CAT	exon	26296964	26297059	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26297060	26297787	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=intron:HG00642_ch_T0001836:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26297788	26297836	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26297837	26304341	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=intron:HG00642_ch_T0001836:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26304342	26304400	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26304401	26308683	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=intron:HG00642_ch_T0001836:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308684	26308773	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26309866	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=intron:HG00642_ch_T0001836:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26309867	26309951	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26309952	26312311	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=intron:HG00642_ch_T0001836:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312312	26312449	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00642_ch_T0001836;gene_id=HG00642_ch_G0000673;Parent=HG00642_ch_T0001836;transcript_name=HG00642_ch_T0001836;gene_name=ENSG00000235583;ID=exon:HG00642_ch_T0001836:5;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26302026	26317421	.	-	.	source_gene_common_name=ENSG00000304207;source_gene=ENSG00000304207.1;gene_id=HG00642_ch_G0000674;gene_biotype=lncRNA;gene_name=ENSG00000304207;gene_sources=liftoff;ID=HG00642_ch_G0000674;Name=ENSG00000304207
HG00642_chrY	CAT	transcript	26302026	26317420	1000	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=HG00642_ch_T0001837;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302026	26302461	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001837:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26309866	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001837:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26309867	26309951	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26309952	26312327	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001837:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312328	26312449	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26316404	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001837:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26316405	26316567	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26316568	26317315	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001837:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26317316	26317420	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001837;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001837;transcript_name=HG00642_ch_T0001837;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001837:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26302026	26317421	1000	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=HG00642_ch_T0001838;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302026	26302461	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001838:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001838:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001838:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26312311	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001838:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312312	26312449	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001838:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26317315	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001838:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26317316	26317421	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001838;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001838;transcript_name=HG00642_ch_T0001838;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001838:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26302026	26317413	1000	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=HG00642_ch_T0001839;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302026	26302461	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001839:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001839:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001839:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26312327	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001839:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312328	26312449	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001839:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26316404	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001839:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26316405	26316567	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001839:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26316568	26317315	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001839:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26317316	26317413	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001839;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001839;transcript_name=HG00642_ch_T0001839;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001839:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26302039	26317362	1000	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=HG00642_ch_T0001840;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302039	26302461	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001840:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26309866	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001840:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26309867	26309951	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26309952	26312311	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001840:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312312	26312449	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26316404	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001840:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26316405	26316567	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26316568	26317315	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001840:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26317316	26317362	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001840;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001840;transcript_name=HG00642_ch_T0001840;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001840:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26302039	26317404	1000	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=HG00642_ch_T0001841;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302039	26302461	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001841:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001841:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001841:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26309866	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001841:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26309867	26309951	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001841:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26309952	26312311	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001841:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312312	26312449	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001841:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26317315	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001841:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26317316	26317404	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001841;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001841;transcript_name=HG00642_ch_T0001841;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001841:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26302272	26316712	1000	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_G0000674;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=HG00642_ch_T0001842;Name=ENSG00000304207
HG00642_chrY	CAT	exon	26302272	26302461	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001842:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26302462	26308688	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001842:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26308689	26308773	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001842:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26308774	26309866	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001842:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26309867	26309951	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001842:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26309952	26312327	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001842:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26312328	26312449	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001842:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26312450	26316404	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=intron:HG00642_ch_T0001842:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26316405	26316712	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00642_ch_T0001842;gene_id=HG00642_ch_G0000674;Parent=HG00642_ch_T0001842;transcript_name=HG00642_ch_T0001842;gene_name=ENSG00000304207;ID=exon:HG00642_ch_T0001842:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26348789	26350700	.	-	.	source_gene_common_name=CDY19P;source_gene=ENSG00000237823.1;alternative_source_transcripts=ENST00000411668.1;gene_id=HG00642_ch_G0000675;gene_biotype=unprocessed_pseudogene;gene_name=CDY19P;gene_sources=liftoff;ID=HG00642_ch_G0000675;Name=CDY19P
HG00642_chrY	CAT	transcript	26348789	26350700	1000	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1;transcript_id=HG00642_ch_T0001843;gene_id=HG00642_ch_G0000675;Parent=HG00642_ch_G0000675;transcript_name=HG00642_ch_T0001843;gene_name=CDY19P;ID=HG00642_ch_T0001843;Name=CDY19P
HG00642_chrY	CAT	exon	26348789	26350230	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1;transcript_id=HG00642_ch_T0001843;gene_id=HG00642_ch_G0000675;Parent=HG00642_ch_T0001843;transcript_name=HG00642_ch_T0001843;gene_name=CDY19P;ID=exon:HG00642_ch_T0001843:0;Name=CDY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26350231	26350529	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1;transcript_id=HG00642_ch_T0001843;gene_id=HG00642_ch_G0000675;Parent=HG00642_ch_T0001843;transcript_name=HG00642_ch_T0001843;gene_name=CDY19P;ID=intron:HG00642_ch_T0001843:0;Name=CDY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26350530	26350700	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1;transcript_id=HG00642_ch_T0001843;gene_id=HG00642_ch_G0000675;Parent=HG00642_ch_T0001843;transcript_name=HG00642_ch_T0001843;gene_name=CDY19P;ID=exon:HG00642_ch_T0001843:1;Name=CDY19P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26364457	26373111	.	+	.	source_gene_common_name=USP9YP36;source_gene=ENSG00000229709.1;alternative_source_transcripts=ENST00000424581.1;gene_id=HG00642_ch_G0000676;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP36;gene_sources=liftoff;ID=HG00642_ch_G0000676;Name=USP9YP36
HG00642_chrY	CAT	transcript	26364457	26373111	1000	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_G0000676;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=HG00642_ch_T0001844;Name=USP9YP36
HG00642_chrY	CAT	exon	26364457	26364662	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=exon:HG00642_ch_T0001844:0;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26364663	26366825	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=intron:HG00642_ch_T0001844:0;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26366826	26367049	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=exon:HG00642_ch_T0001844:1;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26367050	26368853	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=intron:HG00642_ch_T0001844:1;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26368854	26369032	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=exon:HG00642_ch_T0001844:2;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26369033	26370844	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=intron:HG00642_ch_T0001844:2;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26370845	26370934	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=exon:HG00642_ch_T0001844:3;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26370935	26372981	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=intron:HG00642_ch_T0001844:3;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26372982	26373111	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1;transcript_id=HG00642_ch_T0001844;gene_id=HG00642_ch_G0000676;Parent=HG00642_ch_T0001844;transcript_name=HG00642_ch_T0001844;gene_name=USP9YP36;ID=exon:HG00642_ch_T0001844:4;Name=USP9YP36;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26374990	26377012	.	-	.	source_gene_common_name=USP9YP33;source_gene=ENSG00000232064.1;alternative_source_transcripts=ENST00000412220.1;gene_id=HG00642_ch_G0000677;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP33;gene_sources=liftoff;ID=HG00642_ch_G0000677;Name=USP9YP33
HG00642_chrY	CAT	transcript	26374990	26377012	1000	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1;transcript_id=HG00642_ch_T0001845;gene_id=HG00642_ch_G0000677;Parent=HG00642_ch_G0000677;transcript_name=HG00642_ch_T0001845;gene_name=USP9YP33;ID=HG00642_ch_T0001845;Name=USP9YP33
HG00642_chrY	CAT	exon	26374990	26375180	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1;transcript_id=HG00642_ch_T0001845;gene_id=HG00642_ch_G0000677;Parent=HG00642_ch_T0001845;transcript_name=HG00642_ch_T0001845;gene_name=USP9YP33;ID=exon:HG00642_ch_T0001845:0;Name=USP9YP33;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26375181	26376782	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1;transcript_id=HG00642_ch_T0001845;gene_id=HG00642_ch_G0000677;Parent=HG00642_ch_T0001845;transcript_name=HG00642_ch_T0001845;gene_name=USP9YP33;ID=intron:HG00642_ch_T0001845:0;Name=USP9YP33;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26376783	26377012	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1;transcript_id=HG00642_ch_T0001845;gene_id=HG00642_ch_G0000677;Parent=HG00642_ch_T0001845;transcript_name=HG00642_ch_T0001845;gene_name=USP9YP33;ID=exon:HG00642_ch_T0001845:1;Name=USP9YP33;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26403311	26404920	.	+	.	source_gene_common_name=CDY20P;source_gene=ENSG00000225609.1;alternative_source_transcripts=ENST00000447528.1;gene_id=HG00642_ch_G0000678;gene_biotype=unprocessed_pseudogene;gene_name=CDY20P;gene_sources=liftoff;ID=HG00642_ch_G0000678;Name=CDY20P
HG00642_chrY	CAT	transcript	26403311	26404920	1000	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1;transcript_id=HG00642_ch_T0001846;gene_id=HG00642_ch_G0000678;Parent=HG00642_ch_G0000678;transcript_name=HG00642_ch_T0001846;gene_name=CDY20P;ID=HG00642_ch_T0001846;Name=CDY20P
HG00642_chrY	CAT	exon	26403311	26403376	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1;transcript_id=HG00642_ch_T0001846;gene_id=HG00642_ch_G0000678;Parent=HG00642_ch_T0001846;transcript_name=HG00642_ch_T0001846;gene_name=CDY20P;ID=exon:HG00642_ch_T0001846:0;Name=CDY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26403377	26403707	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1;transcript_id=HG00642_ch_T0001846;gene_id=HG00642_ch_G0000678;Parent=HG00642_ch_T0001846;transcript_name=HG00642_ch_T0001846;gene_name=CDY20P;ID=intron:HG00642_ch_T0001846:0;Name=CDY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26403708	26404920	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1;transcript_id=HG00642_ch_T0001846;gene_id=HG00642_ch_G0000678;Parent=HG00642_ch_T0001846;transcript_name=HG00642_ch_T0001846;gene_name=CDY20P;ID=exon:HG00642_ch_T0001846:1;Name=CDY20P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26406784	26409569	.	+	.	source_gene_common_name=CDY1;source_gene=ENSG00000172288.8;alternative_source_transcripts=ENST00000306609.5;gene_id=HG00642_ch_G0000679;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG00642_ch_G0000679;Name=CDY1
HG00642_chrY	CAT	transcript	26406784	26409569	100	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_G0000679;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=HG00642_ch_T0001847;Name=CDY1
HG00642_chrY	CAT	exon	26406784	26408701	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=exon:HG00642_ch_T0001847:0;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	26407110	26408701	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=CDS:HG00642_ch_T0001847:0;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	26407110	26407112	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=start_codon:HG00642_ch_T0001847;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26408702	26409121	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=intron:HG00642_ch_T0001847:0;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26409122	26409569	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=exon:HG00642_ch_T0001847:1;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	26409122	26409194	.	+	1	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=CDS:HG00642_ch_T0001847:1;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	26409192	26409194	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5;transcript_id=HG00642_ch_T0001847;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001847;transcript_name=HG00642_ch_T0001847;gene_name=CDY1;ID=stop_codon:HG00642_ch_T0001847;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26406829	26409005	100	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3;transcript_id=HG00642_ch_T0001848;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_G0000679;transcript_name=HG00642_ch_T0001848;gene_name=CDY1;ID=HG00642_ch_T0001848;Name=CDY1
HG00642_chrY	CAT	exon	26406829	26409005	.	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3;transcript_id=HG00642_ch_T0001848;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001848;transcript_name=HG00642_ch_T0001848;gene_name=CDY1;ID=exon:HG00642_ch_T0001848:0;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	26407110	26408732	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3;transcript_id=HG00642_ch_T0001848;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001848;transcript_name=HG00642_ch_T0001848;gene_name=CDY1;ID=CDS:HG00642_ch_T0001848:0;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	26407110	26407112	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3;transcript_id=HG00642_ch_T0001848;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001848;transcript_name=HG00642_ch_T0001848;gene_name=CDY1;ID=start_codon:HG00642_ch_T0001848;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	26408730	26408732	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3;transcript_id=HG00642_ch_T0001848;gene_id=HG00642_ch_G0000679;Parent=HG00642_ch_T0001848;transcript_name=HG00642_ch_T0001848;gene_name=CDY1;ID=stop_codon:HG00642_ch_T0001848;Name=CDY1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26447537	26447863	.	+	.	source_gene_common_name=ELOCP10;source_gene=ENSG00000234081.1;alternative_source_transcripts=ENST00000604436.1;gene_id=HG00642_ch_G0000680;gene_biotype=processed_pseudogene;gene_name=ELOCP10;gene_sources=liftoff;ID=HG00642_ch_G0000680;Name=ELOCP10
HG00642_chrY	CAT	transcript	26447537	26447863	1000	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000604436.1;transcript_id=HG00642_ch_T0001849;gene_id=HG00642_ch_G0000680;Parent=HG00642_ch_G0000680;transcript_name=HG00642_ch_T0001849;gene_name=ELOCP10;ID=HG00642_ch_T0001849;Name=ELOCP10
HG00642_chrY	CAT	exon	26447537	26447863	.	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000604436.1;transcript_id=HG00642_ch_T0001849;gene_id=HG00642_ch_G0000680;Parent=HG00642_ch_T0001849;transcript_name=HG00642_ch_T0001849;gene_name=ELOCP10;ID=exon:HG00642_ch_T0001849:0;Name=ELOCP10;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26459690	26481976	.	-	.	source_gene_common_name=OFD1P13Y;source_gene=ENSG00000225287.1;alternative_source_transcripts=ENST00000431179.1;gene_id=HG00642_ch_G0000681;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P13Y;gene_sources=liftoff;ID=HG00642_ch_G0000681;Name=OFD1P13Y
HG00642_chrY	CAT	transcript	26459690	26481976	1000	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_G0000681;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=HG00642_ch_T0001850;Name=OFD1P13Y
HG00642_chrY	CAT	exon	26459690	26459838	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26459839	26461452	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26461453	26461544	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26461545	26462649	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26462650	26462723	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26462724	26464499	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26464500	26464616	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26464617	26466722	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26466723	26466828	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26466829	26469873	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26469874	26470009	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26470010	26470348	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26470349	26470481	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26470482	26477958	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26477959	26478017	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26478018	26478102	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26478103	26478171	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26478172	26480379	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26480380	26480578	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26480579	26481878	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=intron:HG00642_ch_T0001850:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26481879	26481976	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1;transcript_id=HG00642_ch_T0001850;gene_id=HG00642_ch_G0000681;Parent=HG00642_ch_T0001850;transcript_name=HG00642_ch_T0001850;gene_name=OFD1P13Y;ID=exon:HG00642_ch_T0001850:10;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26484081	26487192	.	+	.	source_gene_common_name=TRAPPC2P5;source_gene=ENSG00000225256.1;alternative_source_transcripts=ENST00000426293.1;gene_id=HG00642_ch_G0000682;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P5;gene_sources=liftoff;ID=HG00642_ch_G0000682;Name=TRAPPC2P5
HG00642_chrY	CAT	transcript	26484081	26487192	1000	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_G0000682;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=HG00642_ch_T0001851;Name=TRAPPC2P5
HG00642_chrY	CAT	exon	26484081	26484173	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_T0001851;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=exon:HG00642_ch_T0001851:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26484174	26486536	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_T0001851;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=intron:HG00642_ch_T0001851:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26486537	26486671	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_T0001851;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=exon:HG00642_ch_T0001851:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26486672	26487112	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_T0001851;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=intron:HG00642_ch_T0001851:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26487113	26487192	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1;transcript_id=HG00642_ch_T0001851;gene_id=HG00642_ch_G0000682;Parent=HG00642_ch_T0001851;transcript_name=HG00642_ch_T0001851;gene_name=TRAPPC2P5;ID=exon:HG00642_ch_T0001851:2;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26494538	26498187	.	-	.	source_gene_common_name=RAB9AP2;source_gene=ENSG00000223856.1;alternative_source_transcripts=ENST00000443911.1;gene_id=HG00642_ch_G0000683;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP2;gene_sources=liftoff;ID=HG00642_ch_G0000683;Name=RAB9AP2
HG00642_chrY	CAT	transcript	26494538	26498187	1000	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00642_ch_T0001852;gene_id=HG00642_ch_G0000683;Parent=HG00642_ch_G0000683;transcript_name=HG00642_ch_T0001852;gene_name=RAB9AP2;ID=HG00642_ch_T0001852;Name=RAB9AP2
HG00642_chrY	CAT	exon	26494538	26494900	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00642_ch_T0001852;gene_id=HG00642_ch_G0000683;Parent=HG00642_ch_T0001852;transcript_name=HG00642_ch_T0001852;gene_name=RAB9AP2;ID=exon:HG00642_ch_T0001852:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26494901	26497953	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00642_ch_T0001852;gene_id=HG00642_ch_G0000683;Parent=HG00642_ch_T0001852;transcript_name=HG00642_ch_T0001852;gene_name=RAB9AP2;ID=intron:HG00642_ch_T0001852:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26497954	26498187	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00642_ch_T0001852;gene_id=HG00642_ch_G0000683;Parent=HG00642_ch_T0001852;transcript_name=HG00642_ch_T0001852;gene_name=RAB9AP2;ID=exon:HG00642_ch_T0001852:1;Name=RAB9AP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26507652	26508822	.	+	.	source_gene_common_name=USP9YP30;source_gene=ENSG00000235004.1;alternative_source_transcripts=ENST00000430729.1;gene_id=HG00642_ch_G0000684;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP30;gene_sources=liftoff;ID=HG00642_ch_G0000684;Name=USP9YP30
HG00642_chrY	CAT	transcript	26507652	26508822	1000	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_G0000684;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=HG00642_ch_T0001853;Name=USP9YP30
HG00642_chrY	CAT	exon	26507652	26507817	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_T0001853;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=exon:HG00642_ch_T0001853:0;Name=USP9YP30;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26507818	26508152	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_T0001853;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=intron:HG00642_ch_T0001853:0;Name=USP9YP30;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26508153	26508346	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_T0001853;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=exon:HG00642_ch_T0001853:1;Name=USP9YP30;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26508347	26508727	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_T0001853;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=intron:HG00642_ch_T0001853:1;Name=USP9YP30;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26508728	26508822	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00642_ch_T0001853;gene_id=HG00642_ch_G0000684;Parent=HG00642_ch_T0001853;transcript_name=HG00642_ch_T0001853;gene_name=USP9YP30;ID=exon:HG00642_ch_T0001853:2;Name=USP9YP30;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26507978	26508131	.	+	.	source_gene_common_name=RNU1-107P;source_gene=ENSG00000252426.1;alternative_source_transcripts=ENST00000516617.1;gene_id=HG00642_ch_G0000685;gene_biotype=snRNA;gene_name=RNU1-107P;gene_sources=liftoff;ID=HG00642_ch_G0000685;Name=RNU1-107P
HG00642_chrY	CAT	transcript	26507978	26508131	1000	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516617.1;transcript_id=HG00642_ch_T0001854;gene_id=HG00642_ch_G0000685;Parent=HG00642_ch_G0000685;transcript_name=HG00642_ch_T0001854;gene_name=RNU1-107P;ID=HG00642_ch_T0001854;Name=RNU1-107P
HG00642_chrY	CAT	exon	26507978	26508131	.	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516617.1;transcript_id=HG00642_ch_T0001854;gene_id=HG00642_ch_G0000685;Parent=HG00642_ch_T0001854;transcript_name=HG00642_ch_T0001854;gene_name=RNU1-107P;ID=exon:HG00642_ch_T0001854:0;Name=RNU1-107P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26513126	26518021	.	+	.	source_gene_common_name=TTTY3;source_gene=ENSG00000231141.1;alternative_source_transcripts=ENST00000417334.1;gene_id=HG00642_ch_G0000686;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG00642_ch_G0000686;Name=TTTY3
HG00642_chrY	CAT	transcript	26513126	26518021	1000	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_G0000686;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=HG00642_ch_T0001855;Name=TTTY3
HG00642_chrY	CAT	exon	26513126	26513229	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_T0001855;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=exon:HG00642_ch_T0001855:0;Name=TTTY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26513230	26515427	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_T0001855;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=intron:HG00642_ch_T0001855:0;Name=TTTY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26515428	26515562	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_T0001855;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=exon:HG00642_ch_T0001855:1;Name=TTTY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26515563	26517916	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_T0001855;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=intron:HG00642_ch_T0001855:1;Name=TTTY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26517917	26518021	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG00642_ch_T0001855;gene_id=HG00642_ch_G0000686;Parent=HG00642_ch_T0001855;transcript_name=HG00642_ch_T0001855;gene_name=TTTY3;ID=exon:HG00642_ch_T0001855:2;Name=TTTY3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26514647	26519793	.	-	.	source_gene_common_name=USP9YP9;source_gene=ENSG00000232614.1;alternative_source_transcripts=ENST00000429406.1;gene_id=HG00642_ch_G0000687;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP9;gene_sources=liftoff;ID=HG00642_ch_G0000687;Name=USP9YP9
HG00642_chrY	CAT	transcript	26514647	26519793	1000	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_G0000687;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=HG00642_ch_T0001856;Name=USP9YP9
HG00642_chrY	CAT	exon	26514647	26514839	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=exon:HG00642_ch_T0001856:0;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26514840	26516472	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=intron:HG00642_ch_T0001856:0;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26516473	26516735	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=exon:HG00642_ch_T0001856:1;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26516736	26517859	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=intron:HG00642_ch_T0001856:1;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26517860	26518081	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=exon:HG00642_ch_T0001856:2;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26518082	26519756	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=intron:HG00642_ch_T0001856:2;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26519757	26519793	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1;transcript_id=HG00642_ch_T0001856;gene_id=HG00642_ch_G0000687;Parent=HG00642_ch_T0001856;transcript_name=HG00642_ch_T0001856;gene_name=USP9YP9;ID=exon:HG00642_ch_T0001856:3;Name=USP9YP9;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26533229	26534840	.	-	.	source_gene_common_name=USP9YP19;source_gene=ENSG00000225326.1;alternative_source_transcripts=ENST00000412165.1;gene_id=HG00642_ch_G0000688;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP19;gene_sources=liftoff;ID=HG00642_ch_G0000688;Name=USP9YP19
HG00642_chrY	CAT	transcript	26533229	26534840	1000	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1;transcript_id=HG00642_ch_T0001857;gene_id=HG00642_ch_G0000688;Parent=HG00642_ch_G0000688;transcript_name=HG00642_ch_T0001857;gene_name=USP9YP19;ID=HG00642_ch_T0001857;Name=USP9YP19
HG00642_chrY	CAT	exon	26533229	26533495	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1;transcript_id=HG00642_ch_T0001857;gene_id=HG00642_ch_G0000688;Parent=HG00642_ch_T0001857;transcript_name=HG00642_ch_T0001857;gene_name=USP9YP19;ID=exon:HG00642_ch_T0001857:0;Name=USP9YP19;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26533496	26534622	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1;transcript_id=HG00642_ch_T0001857;gene_id=HG00642_ch_G0000688;Parent=HG00642_ch_T0001857;transcript_name=HG00642_ch_T0001857;gene_name=USP9YP19;ID=intron:HG00642_ch_T0001857:0;Name=USP9YP19;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26534623	26534840	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1;transcript_id=HG00642_ch_T0001857;gene_id=HG00642_ch_G0000688;Parent=HG00642_ch_T0001857;transcript_name=HG00642_ch_T0001857;gene_name=USP9YP19;ID=exon:HG00642_ch_T0001857:1;Name=USP9YP19;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26537022	26537504	.	+	.	source_gene_common_name=XKRYP5;source_gene=ENSG00000223406.1;alternative_source_transcripts=ENST00000449659.1;gene_id=HG00642_ch_G0000689;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP5;gene_sources=liftoff;ID=HG00642_ch_G0000689;Name=XKRYP5
HG00642_chrY	CAT	transcript	26537022	26537504	1000	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=HG00642_ch_T0001858;gene_id=HG00642_ch_G0000689;Parent=HG00642_ch_G0000689;transcript_name=HG00642_ch_T0001858;gene_name=XKRYP5;ID=HG00642_ch_T0001858;Name=XKRYP5
HG00642_chrY	CAT	exon	26537022	26537504	.	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=HG00642_ch_T0001858;gene_id=HG00642_ch_G0000689;Parent=HG00642_ch_T0001858;transcript_name=HG00642_ch_T0001858;gene_name=XKRYP5;ID=exon:HG00642_ch_T0001858:0;Name=XKRYP5;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26597647	26599200	.	+	.	source_gene_common_name=CDY22P;source_gene=ENSG00000229343.1;alternative_source_transcripts=ENST00000451423.1;gene_id=HG00642_ch_G0000690;gene_biotype=unprocessed_pseudogene;gene_name=CDY22P;gene_sources=liftoff;ID=HG00642_ch_G0000690;Name=CDY22P
HG00642_chrY	CAT	transcript	26597647	26599200	1000	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;alternative_source_transcripts=ENST00000451423.1;transcript_id=HG00642_ch_T0001859;gene_id=HG00642_ch_G0000690;Parent=HG00642_ch_G0000690;transcript_name=HG00642_ch_T0001859;gene_name=CDY22P;ID=HG00642_ch_T0001859;Name=CDY22P
HG00642_chrY	CAT	exon	26597647	26599200	.	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;alternative_source_transcripts=ENST00000451423.1;transcript_id=HG00642_ch_T0001859;gene_id=HG00642_ch_G0000690;Parent=HG00642_ch_T0001859;transcript_name=HG00642_ch_T0001859;gene_name=CDY22P;ID=exon:HG00642_ch_T0001859:0;Name=CDY22P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26645580	26645905	.	+	.	source_gene_common_name=ELOCP17;source_gene=ENSG00000232695.1;alternative_source_transcripts=ENST00000414751.1;gene_id=HG00642_ch_G0000691;gene_biotype=processed_pseudogene;gene_name=ELOCP17;gene_sources=liftoff;ID=HG00642_ch_G0000691;Name=ELOCP17
HG00642_chrY	CAT	transcript	26645580	26645905	1000	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;alternative_source_transcripts=ENST00000414751.1;transcript_id=HG00642_ch_T0001860;gene_id=HG00642_ch_G0000691;Parent=HG00642_ch_G0000691;transcript_name=HG00642_ch_T0001860;gene_name=ELOCP17;ID=HG00642_ch_T0001860;Name=ELOCP17
HG00642_chrY	CAT	exon	26645580	26645905	.	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;alternative_source_transcripts=ENST00000414751.1;transcript_id=HG00642_ch_T0001860;gene_id=HG00642_ch_G0000691;Parent=HG00642_ch_T0001860;transcript_name=HG00642_ch_T0001860;gene_name=ELOCP17;ID=exon:HG00642_ch_T0001860:0;Name=ELOCP17;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26656568	26683298	.	-	.	source_gene_common_name=OFD1P18Y;source_gene=ENSG00000235511.1;alternative_source_transcripts=ENST00000420889.1;gene_id=HG00642_ch_G0000692;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P18Y;gene_sources=liftoff;ID=HG00642_ch_G0000692;Name=OFD1P18Y
HG00642_chrY	CAT	transcript	26656568	26683298	1000	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_G0000692;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=HG00642_ch_T0001861;Name=OFD1P18Y
HG00642_chrY	CAT	exon	26656568	26656639	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26656640	26657741	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26657742	26657815	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26657816	26659601	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26659602	26659720	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26659721	26662367	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26662368	26662473	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26662474	26665519	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26665520	26665667	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26665668	26666011	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26666012	26666146	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26666147	26681775	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26681776	26681981	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26681982	26683199	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=intron:HG00642_ch_T0001861:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26683200	26683298	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1;transcript_id=HG00642_ch_T0001861;gene_id=HG00642_ch_G0000692;Parent=HG00642_ch_T0001861;transcript_name=HG00642_ch_T0001861;gene_name=OFD1P18Y;ID=exon:HG00642_ch_T0001861:7;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26689166	26691898	.	+	.	source_gene_common_name=TRAPPC2P4;source_gene=ENSG00000232914.1;alternative_source_transcripts=ENST00000421750.1;gene_id=HG00642_ch_G0000693;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P4;gene_sources=liftoff;ID=HG00642_ch_G0000693;Name=TRAPPC2P4
HG00642_chrY	CAT	transcript	26689166	26691898	1000	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_G0000693;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=HG00642_ch_T0001862;Name=TRAPPC2P4
HG00642_chrY	CAT	exon	26689166	26689258	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_T0001862;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=exon:HG00642_ch_T0001862:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26689259	26691212	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_T0001862;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=intron:HG00642_ch_T0001862:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26691213	26691357	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_T0001862;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=exon:HG00642_ch_T0001862:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26691358	26691805	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_T0001862;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=intron:HG00642_ch_T0001862:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26691806	26691898	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1;transcript_id=HG00642_ch_T0001862;gene_id=HG00642_ch_G0000693;Parent=HG00642_ch_T0001862;transcript_name=HG00642_ch_T0001862;gene_name=TRAPPC2P4;ID=exon:HG00642_ch_T0001862:2;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26702971	26703543	.	-	.	source_gene_common_name=RAB9AP3;source_gene=ENSG00000223655.1;alternative_source_transcripts=ENST00000412737.1;gene_id=HG00642_ch_G0000694;gene_biotype=processed_pseudogene;gene_name=RAB9AP3;gene_sources=liftoff;ID=HG00642_ch_G0000694;Name=RAB9AP3
HG00642_chrY	CAT	transcript	26702971	26703543	1000	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000412737.1;transcript_id=HG00642_ch_T0001863;gene_id=HG00642_ch_G0000694;Parent=HG00642_ch_G0000694;transcript_name=HG00642_ch_T0001863;gene_name=RAB9AP3;ID=HG00642_ch_T0001863;Name=RAB9AP3
HG00642_chrY	CAT	exon	26702971	26703543	.	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000412737.1;transcript_id=HG00642_ch_T0001863;gene_id=HG00642_ch_G0000694;Parent=HG00642_ch_T0001863;transcript_name=HG00642_ch_T0001863;gene_name=RAB9AP3;ID=exon:HG00642_ch_T0001863:0;Name=RAB9AP3;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26708036	26714489	.	+	.	source_gene_common_name=USP9YP20;source_gene=ENSG00000230854.1;gene_id=HG00642_ch_G0000695;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP20;gene_sources=liftoff;ID=HG00642_ch_G0000695;Name=USP9YP20
HG00642_chrY	CAT	transcript	26708036	26714489	1000	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_G0000695;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=HG00642_ch_T0001864;Name=USP9YP20
HG00642_chrY	CAT	exon	26708036	26708167	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=exon:HG00642_ch_T0001864:0;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26708168	26713324	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=intron:HG00642_ch_T0001864:0;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26713325	26713462	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=exon:HG00642_ch_T0001864:1;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26713463	26713605	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=intron:HG00642_ch_T0001864:1;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26713606	26713642	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=exon:HG00642_ch_T0001864:2;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26713643	26713856	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=intron:HG00642_ch_T0001864:2;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26713857	26714014	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=exon:HG00642_ch_T0001864:3;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26714015	26714396	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=intron:HG00642_ch_T0001864:3;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26714397	26714489	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00642_ch_T0001864;gene_id=HG00642_ch_G0000695;Parent=HG00642_ch_T0001864;transcript_name=HG00642_ch_T0001864;gene_name=USP9YP20;ID=exon:HG00642_ch_T0001864:4;Name=USP9YP20;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26713642	26713805	.	+	.	source_gene_common_name=RNU1-40P;source_gene=ENSG00000252625.1;gene_id=HG00642_ch_G0000696;gene_biotype=snRNA;gene_name=RNU1-40P;gene_sources=liftoff;ID=HG00642_ch_G0000696;Name=RNU1-40P
HG00642_chrY	CAT	transcript	26713642	26713805	1000	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG00642_ch_T0001865;gene_id=HG00642_ch_G0000696;Parent=HG00642_ch_G0000696;transcript_name=HG00642_ch_T0001865;gene_name=RNU1-40P;ID=HG00642_ch_T0001865;Name=RNU1-40P
HG00642_chrY	CAT	exon	26713642	26713805	.	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG00642_ch_T0001865;gene_id=HG00642_ch_G0000696;Parent=HG00642_ch_T0001865;transcript_name=HG00642_ch_T0001865;gene_name=RNU1-40P;ID=exon:HG00642_ch_T0001865:0;Name=RNU1-40P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26718486	26720542	.	-	.	source_gene_common_name=USP9YP25;source_gene=ENSG00000224866.1;gene_id=HG00642_ch_G0000697;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP25;gene_sources=liftoff;ID=HG00642_ch_G0000697;Name=USP9YP25
HG00642_chrY	CAT	transcript	26718486	26720542	1000	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00642_ch_T0001866;gene_id=HG00642_ch_G0000697;Parent=HG00642_ch_G0000697;transcript_name=HG00642_ch_T0001866;gene_name=USP9YP25;ID=HG00642_ch_T0001866;Name=USP9YP25
HG00642_chrY	CAT	exon	26718486	26718677	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00642_ch_T0001866;gene_id=HG00642_ch_G0000697;Parent=HG00642_ch_T0001866;transcript_name=HG00642_ch_T0001866;gene_name=USP9YP25;ID=exon:HG00642_ch_T0001866:0;Name=USP9YP25;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26718678	26720291	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00642_ch_T0001866;gene_id=HG00642_ch_G0000697;Parent=HG00642_ch_T0001866;transcript_name=HG00642_ch_T0001866;gene_name=USP9YP25;ID=intron:HG00642_ch_T0001866:0;Name=USP9YP25;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26720292	26720542	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00642_ch_T0001866;gene_id=HG00642_ch_G0000697;Parent=HG00642_ch_T0001866;transcript_name=HG00642_ch_T0001866;gene_name=USP9YP25;ID=exon:HG00642_ch_T0001866:1;Name=USP9YP25;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26727927	26738811	.	+	.	source_gene_common_name=XKRYP6;source_gene=ENSG00000237546.1;alternative_source_transcripts=ENST00000440468.1;gene_id=HG00642_ch_G0000698;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP6;gene_sources=liftoff;ID=HG00642_ch_G0000698;Name=XKRYP6
HG00642_chrY	CAT	transcript	26727927	26738811	1000	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00642_ch_T0001867;gene_id=HG00642_ch_G0000698;Parent=HG00642_ch_G0000698;transcript_name=HG00642_ch_T0001867;gene_name=XKRYP6;ID=HG00642_ch_T0001867;Name=XKRYP6
HG00642_chrY	CAT	exon	26727927	26728262	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00642_ch_T0001867;gene_id=HG00642_ch_G0000698;Parent=HG00642_ch_T0001867;transcript_name=HG00642_ch_T0001867;gene_name=XKRYP6;ID=exon:HG00642_ch_T0001867:0;Name=XKRYP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26728263	26738031	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00642_ch_T0001867;gene_id=HG00642_ch_G0000698;Parent=HG00642_ch_T0001867;transcript_name=HG00642_ch_T0001867;gene_name=XKRYP6;ID=intron:HG00642_ch_T0001867:0;Name=XKRYP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26738032	26738811	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00642_ch_T0001867;gene_id=HG00642_ch_G0000698;Parent=HG00642_ch_T0001867;transcript_name=HG00642_ch_T0001867;gene_name=XKRYP6;ID=exon:HG00642_ch_T0001867:1;Name=XKRYP6;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26775900	26776231	.	-	.	source_gene_common_name=ELOCP11;source_gene=ENSG00000227867.1;alternative_source_transcripts=ENST00000436690.1;gene_id=HG00642_ch_G0000699;gene_biotype=processed_pseudogene;gene_name=ELOCP11;gene_sources=liftoff;ID=HG00642_ch_G0000699;Name=ELOCP11
HG00642_chrY	CAT	transcript	26775900	26776231	1000	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000436690.1;transcript_id=HG00642_ch_T0001868;gene_id=HG00642_ch_G0000699;Parent=HG00642_ch_G0000699;transcript_name=HG00642_ch_T0001868;gene_name=ELOCP11;ID=HG00642_ch_T0001868;Name=ELOCP11
HG00642_chrY	CAT	exon	26775900	26776231	.	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000436690.1;transcript_id=HG00642_ch_T0001868;gene_id=HG00642_ch_G0000699;Parent=HG00642_ch_T0001868;transcript_name=HG00642_ch_T0001868;gene_name=ELOCP11;ID=exon:HG00642_ch_T0001868:0;Name=ELOCP11;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26779343	26780356	.	-	.	source_gene_common_name=CDY23P;source_gene=ENSG00000231716.1;alternative_source_transcripts=ENST00000451661.1;gene_id=HG00642_ch_G0000700;gene_biotype=unprocessed_pseudogene;gene_name=CDY23P;gene_sources=liftoff;ID=HG00642_ch_G0000700;Name=CDY23P
HG00642_chrY	CAT	transcript	26779343	26780356	1000	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000451661.1;transcript_id=HG00642_ch_T0001869;gene_id=HG00642_ch_G0000700;Parent=HG00642_ch_G0000700;transcript_name=HG00642_ch_T0001869;gene_name=CDY23P;ID=HG00642_ch_T0001869;Name=CDY23P
HG00642_chrY	CAT	exon	26779343	26780356	.	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000451661.1;transcript_id=HG00642_ch_T0001869;gene_id=HG00642_ch_G0000700;Parent=HG00642_ch_T0001869;transcript_name=HG00642_ch_T0001869;gene_name=CDY23P;ID=exon:HG00642_ch_T0001869:0;Name=CDY23P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26786913	26793515	.	+	.	source_gene_common_name=USP9YP26;source_gene=ENSG00000234744.1;alternative_source_transcripts=ENST00000421008.1;gene_id=HG00642_ch_G0000701;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP26;gene_sources=liftoff;ID=HG00642_ch_G0000701;Name=USP9YP26
HG00642_chrY	CAT	transcript	26786913	26793515	1000	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_G0000701;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=HG00642_ch_T0001870;Name=USP9YP26
HG00642_chrY	CAT	exon	26786913	26787135	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=exon:HG00642_ch_T0001870:0;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26787136	26788933	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=intron:HG00642_ch_T0001870:0;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26788934	26789052	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=exon:HG00642_ch_T0001870:1;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26789053	26790838	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=intron:HG00642_ch_T0001870:1;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26790839	26791028	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=exon:HG00642_ch_T0001870:2;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26791029	26793386	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=intron:HG00642_ch_T0001870:2;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26793387	26793515	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1;transcript_id=HG00642_ch_T0001870;gene_id=HG00642_ch_G0000701;Parent=HG00642_ch_T0001870;transcript_name=HG00642_ch_T0001870;gene_name=USP9YP26;ID=exon:HG00642_ch_T0001870:3;Name=USP9YP26;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26796094	26796896	.	+	.	source_gene_common_name=HSFY8P;source_gene=ENSG00000233156.1;alternative_source_transcripts=ENST00000437934.1;gene_id=HG00642_ch_G0000702;gene_biotype=unprocessed_pseudogene;gene_name=HSFY8P;gene_sources=liftoff;ID=HG00642_ch_G0000702;Name=HSFY8P
HG00642_chrY	CAT	transcript	26796094	26796896	1000	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1;transcript_id=HG00642_ch_T0001871;gene_id=HG00642_ch_G0000702;Parent=HG00642_ch_G0000702;transcript_name=HG00642_ch_T0001871;gene_name=HSFY8P;ID=HG00642_ch_T0001871;Name=HSFY8P
HG00642_chrY	CAT	exon	26796094	26796252	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1;transcript_id=HG00642_ch_T0001871;gene_id=HG00642_ch_G0000702;Parent=HG00642_ch_T0001871;transcript_name=HG00642_ch_T0001871;gene_name=HSFY8P;ID=exon:HG00642_ch_T0001871:0;Name=HSFY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26796253	26796737	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1;transcript_id=HG00642_ch_T0001871;gene_id=HG00642_ch_G0000702;Parent=HG00642_ch_T0001871;transcript_name=HG00642_ch_T0001871;gene_name=HSFY8P;ID=intron:HG00642_ch_T0001871:0;Name=HSFY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26796738	26796896	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1;transcript_id=HG00642_ch_T0001871;gene_id=HG00642_ch_G0000702;Parent=HG00642_ch_T0001871;transcript_name=HG00642_ch_T0001871;gene_name=HSFY8P;ID=exon:HG00642_ch_T0001871:1;Name=HSFY8P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26813948	26817114	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00642_ch_G0000703;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00642_ch_G0000703;Name=ENSG00000295422
HG00642_chrY	CAT	transcript	26813948	26817114	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_G0000703;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=HG00642_ch_T0001872;Name=ENSG00000295422
HG00642_chrY	CAT	exon	26813948	26815290	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_T0001872;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001872:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26815291	26816825	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_T0001872;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001872:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26816826	26816886	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_T0001872;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001872:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26816887	26817003	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_T0001872;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=intron:HG00642_ch_T0001872:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26817004	26817114	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00642_ch_T0001872;gene_id=HG00642_ch_G0000703;Parent=HG00642_ch_T0001872;transcript_name=HG00642_ch_T0001872;gene_name=ENSG00000295422;ID=exon:HG00642_ch_T0001872:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26832340	27114359	.	-	.	source_gene_common_name=ENSG00000299596;source_gene=ENSG00000299596.1;gene_id=HG00642_ch_G0000704;gene_biotype=lncRNA;gene_name=ENSG00000299596;gene_sources=liftoff;ID=HG00642_ch_G0000704;Name=ENSG00000299596
HG00642_chrY	CAT	transcript	26832340	27011304	1000	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=HG00642_ch_T0001873;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26832340	26833077	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26833078	26835994	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26835995	26836055	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26836056	26839307	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26839308	26839409	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26839410	26848487	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001873:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011304	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001873;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001873;transcript_name=HG00642_ch_T0001873;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001873:6;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26832658	27011317	1000	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=HG00642_ch_T0001874;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26832658	26833077	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26833078	26835994	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26835995	26836058	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26836059	26839307	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26839308	26839409	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26839410	26848487	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001874:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011317	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001874;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001874;transcript_name=HG00642_ch_T0001874;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001874:6;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26839194	27011326	1000	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=HG00642_ch_T0001875;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26839194	26840510	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001875:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26840511	26848487	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001875:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001875:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001875:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001875:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001875:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001875:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001875:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011326	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001875;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001875;transcript_name=HG00642_ch_T0001875;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001875:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26839869	27011397	1000	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=HG00642_ch_T0001876;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26839869	26840129	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001876:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26840130	26848487	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001876:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001876:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001876:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001876:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001876:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001876:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001876:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011397	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001876;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001876;transcript_name=HG00642_ch_T0001876;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001876:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26839869	27011318	1000	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=HG00642_ch_T0001877;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26839869	26840510	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26840511	26848487	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26903360	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26903361	26903451	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26903452	26904311	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26904312	26904428	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26904429	26992738	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001877:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011318	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001877;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001877;transcript_name=HG00642_ch_T0001877;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001877:6;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26840173	27011318	1000	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=HG00642_ch_T0001878;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26840173	26840510	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26840511	26848487	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001878:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848488	26848588	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001878:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001878:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	26998426	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001878:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26998427	26998443	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26998444	27011166	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001878:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011318	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001878;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001878;transcript_name=HG00642_ch_T0001878;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001878:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26848530	27090560	1000	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=HG00642_ch_T0001880;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26848530	26848588	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867927	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27062586	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27062587	27062628	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27062629	27063728	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27063729	27063841	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27063842	27063929	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27063930	27064119	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27064120	27066089	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27066090	27066293	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:6;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27066294	27075711	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:6;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27075712	27075801	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:7;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27075802	27090417	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001880:7;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27090418	27090560	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001880;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001880;transcript_name=HG00642_ch_T0001880;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001880:8;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26867497	27011318	1000	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=HG00642_ch_T0001881;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26867497	26867831	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001881:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26867832	26867927	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001881:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001881:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26992738	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001881:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001881:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001881:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011318	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001881;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001881;transcript_name=HG00642_ch_T0001881;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001881:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26867521	27011317	1000	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=HG00642_ch_T0001882;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26867521	26867831	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26867832	26867927	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001882:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867928	26868038	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26903360	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001882:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26903361	26903451	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26903452	26904311	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001882:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26904312	26904428	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26904429	26992738	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001882:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001882:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011317	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001882;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001882;transcript_name=HG00642_ch_T0001882;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001882:5;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26944057	27011317	1000	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=HG00642_ch_T0001888;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26944057	26944348	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001888:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26944349	26946277	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001888:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26946278	26946309	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001888:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26946310	26954933	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001888:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26954934	26954977	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001888:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26954978	26992738	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001888:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001888:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001888:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011317	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001888;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001888;transcript_name=HG00642_ch_T0001888;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001888:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26954563	27011322	1000	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=HG00642_ch_T0001889;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26954563	26954977	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001889:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26954978	26982993	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001889:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26982994	26983120	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001889:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26983121	26992738	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001889:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001889:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001889:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011322	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001889;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001889;transcript_name=HG00642_ch_T0001889;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001889:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26990268	27011322	1000	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=HG00642_ch_T0001891;Name=ENSG00000299596
HG00642_chrY	CAT	exon	26990268	26990894	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001891;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001891:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26990895	26992738	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001891;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001891:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001891;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001891:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26992812	27011166	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001891;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001891:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27011167	27011322	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001891;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001891;transcript_name=HG00642_ch_T0001891;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001891:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27063932	27114359	1000	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_G0000704;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=HG00642_ch_T0001896;Name=ENSG00000299596
HG00642_chrY	CAT	exon	27063932	27064119	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001896:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27064120	27066089	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001896:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27066090	27066293	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001896:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27066294	27075711	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001896:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27075712	27075801	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001896:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27075802	27113609	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001896:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27113610	27113792	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001896:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27113793	27114194	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=intron:HG00642_ch_T0001896:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27114195	27114359	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00642_ch_T0001896;gene_id=HG00642_ch_G0000704;Parent=HG00642_ch_T0001896;transcript_name=HG00642_ch_T0001896;gene_name=ENSG00000299596;ID=exon:HG00642_ch_T0001896:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26840438	26873149	.	-	.	source_gene_common_name=OFD1P15Y;source_gene=ENSG00000234888.1;gene_id=HG00642_ch_G0000705;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P15Y;gene_sources=liftoff;ID=HG00642_ch_G0000705;Name=OFD1P15Y
HG00642_chrY	CAT	transcript	26840438	26873149	1000	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_G0000705;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=HG00642_ch_T0001879;Name=OFD1P15Y
HG00642_chrY	CAT	exon	26840438	26840508	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26840509	26841689	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26841690	26841853	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26841854	26848491	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26848492	26848588	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26848589	26867941	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26867942	26868038	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26868039	26868407	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26868408	26869027	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26869028	26870744	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26870745	26870857	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26870858	26871393	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26871394	26871518	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26871519	26873044	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=intron:HG00642_ch_T0001879:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26873045	26873149	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00642_ch_T0001879;gene_id=HG00642_ch_G0000705;Parent=HG00642_ch_T0001879;transcript_name=HG00642_ch_T0001879;gene_name=OFD1P15Y;ID=exon:HG00642_ch_T0001879:7;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26894660	26900114	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;alternative_source_transcripts=ENST00000765190.1;gene_id=HG00642_ch_G0000706;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG00642_ch_G0000706;Name=ENSG00000299625
HG00642_chrY	CAT	transcript	26894660	26900108	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_G0000706;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=HG00642_ch_T0001883;Name=ENSG00000299625
HG00642_chrY	CAT	exon	26894660	26894999	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001883;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001883:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26895000	26898917	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001883;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=intron:HG00642_ch_T0001883:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26898918	26899044	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001883;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001883:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26899045	26899408	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001883;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=intron:HG00642_ch_T0001883:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26899409	26900108	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1;transcript_id=HG00642_ch_T0001883;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001883;transcript_name=HG00642_ch_T0001883;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001883:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26894661	26900114	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_G0000706;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=HG00642_ch_T0001884;Name=ENSG00000299625
HG00642_chrY	CAT	exon	26894661	26894999	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001884:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26895000	26896915	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=intron:HG00642_ch_T0001884:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26896916	26897049	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001884:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26897050	26898917	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=intron:HG00642_ch_T0001884:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26898918	26899044	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001884:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26899045	26899408	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=intron:HG00642_ch_T0001884:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26899409	26900114	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG00642_ch_T0001884;gene_id=HG00642_ch_G0000706;Parent=HG00642_ch_T0001884;transcript_name=HG00642_ch_T0001884;gene_name=ENSG00000299625;ID=exon:HG00642_ch_T0001884:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26906315	26920450	.	+	.	source_gene_common_name=ENSG00000293280;source_gene=ENSG00000293280.2;gene_id=HG00642_ch_G0000707;gene_biotype=lncRNA;gene_name=ENSG00000293280;gene_sources=liftoff;ID=HG00642_ch_G0000707;Name=ENSG00000293280
HG00642_chrY	CAT	transcript	26906315	26914812	1000	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_G0000707;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=HG00642_ch_T0001885;Name=ENSG00000293280
HG00642_chrY	CAT	exon	26906315	26906478	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26906479	26907232	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26907233	26907312	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26907313	26908326	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26908327	26908439	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908440	26908892	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26908893	26908996	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908997	26911704	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26911705	26911882	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26911883	26913821	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26913822	26913974	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26913975	26914552	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001885:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26914553	26914812	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001885;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001885;transcript_name=HG00642_ch_T0001885;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001885:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	26906325	26920450	1000	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_G0000707;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=HG00642_ch_T0001886;Name=ENSG00000293280
HG00642_chrY	CAT	exon	26906325	26906478	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26906479	26907232	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26907233	26907312	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26907313	26908326	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26908327	26908439	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908440	26908892	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26908893	26908996	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908997	26911704	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26911705	26911882	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26911883	26913821	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26913822	26913974	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26913975	26915981	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26915982	26916096	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26916097	26920028	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=intron:HG00642_ch_T0001886:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26920029	26920450	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00642_ch_T0001886;gene_id=HG00642_ch_G0000707;Parent=HG00642_ch_T0001886;transcript_name=HG00642_ch_T0001886;gene_name=ENSG00000293280;ID=exon:HG00642_ch_T0001886:7;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26908331	26917969	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;gene_id=HG00642_ch_G0000708;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=liftoff;ID=HG00642_ch_G0000708;Name=RBMY2DP
HG00642_chrY	CAT	transcript	26908331	26917969	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_G0000708;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=HG00642_ch_T0001887;Name=RBMY2DP
HG00642_chrY	CAT	exon	26908331	26908439	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908440	26908892	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26908893	26908996	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26908997	26911704	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26911705	26911882	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26911883	26913821	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26913822	26913974	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26913975	26915981	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26915982	26916096	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26916097	26916965	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26916966	26917076	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26917077	26917158	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26917159	26917246	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26917247	26917670	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=intron:HG00642_ch_T0001887:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26917671	26917969	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00642_ch_T0001887;gene_id=HG00642_ch_G0000708;Parent=HG00642_ch_T0001887;transcript_name=HG00642_ch_T0001887;gene_name=RBMY2DP;ID=exon:HG00642_ch_T0001887:7;Name=RBMY2DP;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	26982994	26992811	.	-	.	source_gene_common_name=REREP2Y;source_gene=ENSG00000235014.1;gene_id=HG00642_ch_G0000709;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG00642_ch_G0000709;Name=REREP2Y
HG00642_chrY	CAT	transcript	26982994	26992811	1000	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00642_ch_T0001890;gene_id=HG00642_ch_G0000709;Parent=HG00642_ch_G0000709;transcript_name=HG00642_ch_T0001890;gene_name=REREP2Y;ID=HG00642_ch_T0001890;Name=REREP2Y
HG00642_chrY	CAT	exon	26982994	26983120	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00642_ch_T0001890;gene_id=HG00642_ch_G0000709;Parent=HG00642_ch_T0001890;transcript_name=HG00642_ch_T0001890;gene_name=REREP2Y;ID=exon:HG00642_ch_T0001890:0;Name=REREP2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	26983121	26992738	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00642_ch_T0001890;gene_id=HG00642_ch_G0000709;Parent=HG00642_ch_T0001890;transcript_name=HG00642_ch_T0001890;gene_name=REREP2Y;ID=intron:HG00642_ch_T0001890:0;Name=REREP2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	26992739	26992811	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00642_ch_T0001890;gene_id=HG00642_ch_G0000709;Parent=HG00642_ch_T0001890;transcript_name=HG00642_ch_T0001890;gene_name=REREP2Y;ID=exon:HG00642_ch_T0001890:1;Name=REREP2Y;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27019274	27019375	.	-	.	source_gene_common_name=ENSG00000289705;source_gene=ENSG00000289705.1;alternative_source_transcripts=ENST00000696462.1;gene_id=HG00642_ch_G0000710;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289705;gene_sources=liftoff;ID=HG00642_ch_G0000710;Name=ENSG00000289705
HG00642_chrY	CAT	transcript	27019274	27019375	1000	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=HG00642_ch_T0001892;gene_id=HG00642_ch_G0000710;Parent=HG00642_ch_G0000710;transcript_name=HG00642_ch_T0001892;gene_name=ENSG00000289705;ID=HG00642_ch_T0001892;Name=ENSG00000289705
HG00642_chrY	CAT	exon	27019274	27019375	.	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=HG00642_ch_T0001892;gene_id=HG00642_ch_G0000710;Parent=HG00642_ch_T0001892;transcript_name=HG00642_ch_T0001892;gene_name=ENSG00000289705;ID=exon:HG00642_ch_T0001892:0;Name=ENSG00000289705;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27029015	27029237	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;alternative_source_transcripts=ENST00000426199.1;gene_id=HG00642_ch_G0000711;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=HG00642_ch_G0000711;Name=ENSG00000225876
HG00642_chrY	CAT	transcript	27029015	27029237	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=HG00642_ch_T0001893;gene_id=HG00642_ch_G0000711;Parent=HG00642_ch_G0000711;transcript_name=HG00642_ch_T0001893;gene_name=ENSG00000225876;ID=HG00642_ch_T0001893;Name=ENSG00000225876
HG00642_chrY	CAT	exon	27029015	27029237	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=HG00642_ch_T0001893;gene_id=HG00642_ch_G0000711;Parent=HG00642_ch_T0001893;transcript_name=HG00642_ch_T0001893;gene_name=ENSG00000225876;ID=exon:HG00642_ch_T0001893:0;Name=ENSG00000225876;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27032048	27032185	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251796.1;alternative_source_transcripts=ENST00000515987.1;gene_id=HG00642_ch_G0000712;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG00642_ch_G0000712;Name=SNORA70
HG00642_chrY	CAT	transcript	27032048	27032185	1000	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=HG00642_ch_T0001894;gene_id=HG00642_ch_G0000712;Parent=HG00642_ch_G0000712;transcript_name=HG00642_ch_T0001894;gene_name=SNORA70;ID=HG00642_ch_T0001894;Name=SNORA70
HG00642_chrY	CAT	exon	27032048	27032185	.	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=HG00642_ch_T0001894;gene_id=HG00642_ch_G0000712;Parent=HG00642_ch_T0001894;transcript_name=HG00642_ch_T0001894;gene_name=SNORA70;ID=exon:HG00642_ch_T0001894:0;Name=SNORA70;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27062587	27139089	.	-	.	source_gene_common_name=PPP1R12BP1;source_gene=ENSG00000229238.3;gene_id=HG00642_ch_G0000713;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP1;gene_sources=liftoff;ID=HG00642_ch_G0000713;Name=PPP1R12BP1
HG00642_chrY	CAT	transcript	27062587	27139089	1000	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_G0000713;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=HG00642_ch_T0001895;Name=PPP1R12BP1
HG00642_chrY	CAT	exon	27062587	27062628	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27062629	27063728	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27063729	27063841	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27063842	27063929	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27063930	27064119	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27064120	27066089	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27066090	27066293	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27066294	27075711	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27075712	27075801	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27075802	27113609	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27113610	27113792	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27113793	27117598	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27117599	27117738	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27117739	27118394	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27118395	27118474	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27118475	27120315	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27120316	27120389	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27120390	27122046	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27122047	27122191	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27122192	27123504	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27123505	27123664	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27123665	27133130	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27133131	27133249	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27133250	27138958	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=intron:HG00642_ch_T0001895:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27138959	27139089	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG00642_ch_T0001895;gene_id=HG00642_ch_G0000713;Parent=HG00642_ch_T0001895;transcript_name=HG00642_ch_T0001895;gene_name=PPP1R12BP1;ID=exon:HG00642_ch_T0001895:12;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27145660	27145763	.	+	.	source_gene_common_name=RNU6-1314P;source_gene=ENSG00000252948.1;alternative_source_transcripts=ENST00000517139.1;gene_id=HG00642_ch_G0000714;gene_biotype=snRNA;gene_name=RNU6-1314P;gene_sources=liftoff;ID=HG00642_ch_G0000714;Name=RNU6-1314P
HG00642_chrY	CAT	transcript	27145660	27145763	1000	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=HG00642_ch_T0001897;gene_id=HG00642_ch_G0000714;Parent=HG00642_ch_G0000714;transcript_name=HG00642_ch_T0001897;gene_name=RNU6-1314P;ID=HG00642_ch_T0001897;Name=RNU6-1314P
HG00642_chrY	CAT	exon	27145660	27145763	.	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=HG00642_ch_T0001897;gene_id=HG00642_ch_G0000714;Parent=HG00642_ch_T0001897;transcript_name=HG00642_ch_T0001897;gene_name=RNU6-1314P;ID=exon:HG00642_ch_T0001897:0;Name=RNU6-1314P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27185283	27185902	.	+	.	source_gene_common_name=CYCSP48;source_gene=ENSG00000233843.1;alternative_source_transcripts=ENST00000417124.1;gene_id=HG00642_ch_G0000715;gene_biotype=processed_pseudogene;gene_name=CYCSP48;gene_sources=liftoff;ID=HG00642_ch_G0000715;Name=CYCSP48
HG00642_chrY	CAT	transcript	27185283	27185902	1000	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG00642_ch_T0001898;gene_id=HG00642_ch_G0000715;Parent=HG00642_ch_G0000715;transcript_name=HG00642_ch_T0001898;gene_name=CYCSP48;ID=HG00642_ch_T0001898;Name=CYCSP48
HG00642_chrY	CAT	exon	27185283	27185333	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG00642_ch_T0001898;gene_id=HG00642_ch_G0000715;Parent=HG00642_ch_T0001898;transcript_name=HG00642_ch_T0001898;gene_name=CYCSP48;ID=exon:HG00642_ch_T0001898:0;Name=CYCSP48;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27185334	27185630	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG00642_ch_T0001898;gene_id=HG00642_ch_G0000715;Parent=HG00642_ch_T0001898;transcript_name=HG00642_ch_T0001898;gene_name=CYCSP48;ID=intron:HG00642_ch_T0001898:0;Name=CYCSP48;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27185631	27185902	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG00642_ch_T0001898;gene_id=HG00642_ch_G0000715;Parent=HG00642_ch_T0001898;transcript_name=HG00642_ch_T0001898;gene_name=CYCSP48;ID=exon:HG00642_ch_T0001898:1;Name=CYCSP48;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27193830	27292928	.	+	.	source_gene_common_name=ENSG00000294742;source_gene=ENSG00000294742.1;gene_id=HG00642_ch_G0000716;gene_biotype=lncRNA;gene_name=ENSG00000294742;gene_sources=liftoff;ID=HG00642_ch_G0000716;Name=ENSG00000294742
HG00642_chrY	CAT	transcript	27193830	27238758	1000	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=HG00642_ch_T0001899;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193830	27193922	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001899:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001899:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001899:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001899:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001899:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27221723	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001899:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221724	27221796	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001899:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221797	27238654	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001899:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27238655	27238758	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001899;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001899;transcript_name=HG00642_ch_T0001899;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001899:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193846	27223674	1000	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=HG00642_ch_T0001900;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193846	27193922	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001900:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001900:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001900:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001900:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001900:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27223478	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001900:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223479	27223674	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001900;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001900;transcript_name=HG00642_ch_T0001900;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001900:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193851	27223608	1000	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=HG00642_ch_T0001901;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193851	27193922	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001901:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001901:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001901:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27207652	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001901:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27207653	27207720	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001901:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27207721	27221600	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001901:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001901:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27223478	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001901:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223479	27223608	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001901;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001901;transcript_name=HG00642_ch_T0001901;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001901:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193851	27292928	1000	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=HG00642_ch_T0001902;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193851	27193922	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27223600	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223601	27223673	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27223674	27225439	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27225440	27225470	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27225471	27227255	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27227256	27227431	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27227432	27238654	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27238655	27238758	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27238759	27292894	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001902:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27292895	27292928	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001902;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001902;transcript_name=HG00642_ch_T0001902;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001902:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193851	27223677	1000	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=HG00642_ch_T0001903;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193851	27193922	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001903:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001903:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001903:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001903:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001903:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27221723	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001903:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221724	27221796	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001903:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221797	27223478	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001903:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223479	27223677	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001903;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001903;transcript_name=HG00642_ch_T0001903;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001903:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193873	27238743	1000	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=HG00642_ch_T0001904;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193873	27193922	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001904:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001904:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001904:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001904:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001904:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27238654	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001904:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27238655	27238743	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001904;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001904;transcript_name=HG00642_ch_T0001904;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001904:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193877	27223618	1000	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=HG00642_ch_T0001905;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193877	27193922	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27193923	27194370	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27205065	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27205066	27205203	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27205204	27207652	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27207653	27207720	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27207721	27211080	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27211081	27211237	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27211238	27221600	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27221723	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221724	27221796	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221797	27223478	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001905:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223479	27223618	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001905;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001905;transcript_name=HG00642_ch_T0001905;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001905:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27193925	27223662	1000	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=HG00642_ch_T0001906;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27193925	27194022	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001906:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194023	27194370	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001906:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27194371	27194617	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001906:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001906:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001906:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27223478	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001906:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223479	27223662	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001906;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001906;transcript_name=HG00642_ch_T0001906;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001906:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	27194370	27238745	1000	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_G0000716;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=HG00642_ch_T0001907;Name=ENSG00000294742
HG00642_chrY	CAT	exon	27194370	27194617	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27221600	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001907:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27221601	27221629	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27221630	27223600	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001907:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27223601	27223673	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27223674	27225439	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001907:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27225440	27225470	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27225471	27227252	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001907:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27227253	27227431	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27227432	27238654	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=intron:HG00642_ch_T0001907:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27238655	27238745	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00642_ch_T0001907;gene_id=HG00642_ch_G0000716;Parent=HG00642_ch_T0001907;transcript_name=HG00642_ch_T0001907;gene_name=ENSG00000294742;ID=exon:HG00642_ch_T0001907:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27194487	27205207	.	+	.	source_gene_common_name=ANKRD36P1;source_gene=ENSG00000188399.5;gene_id=HG00642_ch_G0000717;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANKRD36P1;gene_sources=liftoff;ID=HG00642_ch_G0000717;Name=ANKRD36P1
HG00642_chrY	CAT	transcript	27194487	27205207	1000	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_G0000717;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=HG00642_ch_T0001908;Name=ANKRD36P1
HG00642_chrY	CAT	exon	27194487	27194617	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=exon:HG00642_ch_T0001908:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27194618	27198719	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=intron:HG00642_ch_T0001908:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27198720	27198834	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=exon:HG00642_ch_T0001908:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27198835	27199000	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=intron:HG00642_ch_T0001908:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27199001	27199174	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=exon:HG00642_ch_T0001908:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27199175	27203515	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=intron:HG00642_ch_T0001908:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27203516	27203612	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=exon:HG00642_ch_T0001908:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27203613	27205065	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=intron:HG00642_ch_T0001908:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27205066	27205207	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00642_ch_T0001908;gene_id=HG00642_ch_G0000717;Parent=HG00642_ch_T0001908;transcript_name=HG00642_ch_T0001908;gene_name=ANKRD36P1;ID=exon:HG00642_ch_T0001908:4;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27238652	27238762	.	+	.	source_gene_common_name=ENSG00000277146;source_gene=ENSG00000277146.1;gene_id=HG00642_ch_G0000718;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000277146;gene_sources=liftoff;ID=HG00642_ch_G0000718;Name=ENSG00000277146
HG00642_chrY	CAT	transcript	27238652	27238762	1000	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG00642_ch_T0001909;gene_id=HG00642_ch_G0000718;Parent=HG00642_ch_G0000718;transcript_name=HG00642_ch_T0001909;gene_name=ENSG00000277146;ID=HG00642_ch_T0001909;Name=ENSG00000277146
HG00642_chrY	CAT	exon	27238652	27238762	.	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG00642_ch_T0001909;gene_id=HG00642_ch_G0000718;Parent=HG00642_ch_T0001909;transcript_name=HG00642_ch_T0001909;gene_name=ENSG00000277146;ID=exon:HG00642_ch_T0001909:0;Name=ENSG00000277146;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27278274	27282232	.	+	.	source_gene_common_name=ENSG00000294758;source_gene=ENSG00000294758.1;alternative_source_transcripts=ENST00000725774.1;gene_id=HG00642_ch_G0000719;gene_biotype=lncRNA;gene_name=ENSG00000294758;gene_sources=liftoff;ID=HG00642_ch_G0000719;Name=ENSG00000294758
HG00642_chrY	CAT	transcript	27278274	27282232	1000	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_G0000719;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=HG00642_ch_T0001910;Name=ENSG00000294758
HG00642_chrY	CAT	exon	27278274	27278312	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_T0001910;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=exon:HG00642_ch_T0001910:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27278313	27281552	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_T0001910;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=intron:HG00642_ch_T0001910:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27281553	27281609	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_T0001910;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=exon:HG00642_ch_T0001910:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27281610	27281968	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_T0001910;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=intron:HG00642_ch_T0001910:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27281969	27282232	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG00642_ch_T0001910;gene_id=HG00642_ch_G0000719;Parent=HG00642_ch_T0001910;transcript_name=HG00642_ch_T0001910;gene_name=ENSG00000294758;ID=exon:HG00642_ch_T0001910:2;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27292895	27364376	.	+	.	source_gene_common_name=TPTE2P4;source_gene=ENSG00000215506.5;gene_id=HG00642_ch_G0000720;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TPTE2P4;gene_sources=liftoff;ID=HG00642_ch_G0000720;Name=TPTE2P4
HG00642_chrY	CAT	transcript	27292895	27364376	1000	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_G0000720;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=HG00642_ch_T0001911;Name=TPTE2P4
HG00642_chrY	CAT	exon	27292895	27292948	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27292949	27299737	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27299738	27299791	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27299792	27300336	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27300337	27300390	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27300391	27310532	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27310533	27310592	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27310593	27317465	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27317466	27317516	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27317517	27319004	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27319005	27319166	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27319167	27325651	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27325652	27325771	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27325772	27327424	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27327425	27327524	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27327525	27327670	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27327671	27327733	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27327734	27328465	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27328466	27328530	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27328531	27341673	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27341674	27341738	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27341739	27342559	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27342560	27342634	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27342635	27342732	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27342733	27342821	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27342822	27349003	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27349004	27349064	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27349065	27350863	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27350864	27350945	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27350946	27354545	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27354546	27354651	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27354652	27356568	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27356569	27356648	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27356649	27360609	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27360610	27360700	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27360701	27362109	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27362110	27362180	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27362181	27364274	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=intron:HG00642_ch_T0001911:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27364275	27364376	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00642_ch_T0001911;gene_id=HG00642_ch_G0000720;Parent=HG00642_ch_T0001911;transcript_name=HG00642_ch_T0001911;gene_name=TPTE2P4;ID=exon:HG00642_ch_T0001911:19;Name=TPTE2P4;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27334107	27334425	.	+	.	source_gene_common_name=CYCSP49;source_gene=ENSG00000224240.1;alternative_source_transcripts=ENST00000420810.1;gene_id=HG00642_ch_G0000721;gene_biotype=processed_pseudogene;gene_name=CYCSP49;gene_sources=liftoff;ID=HG00642_ch_G0000721;Name=CYCSP49
HG00642_chrY	CAT	transcript	27334107	27334425	1000	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=HG00642_ch_T0001912;gene_id=HG00642_ch_G0000721;Parent=HG00642_ch_G0000721;transcript_name=HG00642_ch_T0001912;gene_name=CYCSP49;ID=HG00642_ch_T0001912;Name=CYCSP49
HG00642_chrY	CAT	exon	27334107	27334425	.	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=HG00642_ch_T0001912;gene_id=HG00642_ch_G0000721;Parent=HG00642_ch_T0001912;transcript_name=HG00642_ch_T0001912;gene_name=CYCSP49;ID=exon:HG00642_ch_T0001912:0;Name=CYCSP49;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27371330	27376289	.	-	.	source_gene_common_name=SLC25A15P1;source_gene=ENSG00000227629.1;alternative_source_transcripts=ENST00000456738.1;gene_id=HG00642_ch_G0000722;gene_biotype=unprocessed_pseudogene;gene_name=SLC25A15P1;gene_sources=liftoff;ID=HG00642_ch_G0000722;Name=SLC25A15P1
HG00642_chrY	CAT	transcript	27371330	27376289	1000	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_G0000722;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=HG00642_ch_T0001913;Name=SLC25A15P1
HG00642_chrY	CAT	exon	27371330	27371454	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_T0001913;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=exon:HG00642_ch_T0001913:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27371455	27372085	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_T0001913;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=intron:HG00642_ch_T0001913:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27372086	27372248	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_T0001913;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=exon:HG00642_ch_T0001913:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27372249	27376235	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_T0001913;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=intron:HG00642_ch_T0001913:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27376236	27376289	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG00642_ch_T0001913;gene_id=HG00642_ch_G0000722;Parent=HG00642_ch_T0001913;transcript_name=HG00642_ch_T0001913;gene_name=SLC25A15P1;ID=exon:HG00642_ch_T0001913:2;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27379539	27419342	.	-	.	source_gene_common_name=PARP4P1;source_gene=ENSG00000237917.1;alternative_source_transcripts=ENST00000435945.1;gene_id=HG00642_ch_G0000723;gene_biotype=unprocessed_pseudogene;gene_name=PARP4P1;gene_sources=liftoff;ID=HG00642_ch_G0000723;Name=PARP4P1
HG00642_chrY	CAT	transcript	27379539	27419342	1000	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_G0000723;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=HG00642_ch_T0001914;Name=PARP4P1
HG00642_chrY	CAT	exon	27379539	27379733	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:0;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27379734	27385578	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:0;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27385579	27385710	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:1;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27385711	27396402	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:1;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27396403	27396497	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:2;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27396498	27398843	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:2;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27398844	27399652	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:3;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27399653	27399983	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:3;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27399984	27400221	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:4;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27400222	27406462	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:4;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27406463	27406585	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:5;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27406586	27407201	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:5;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27407202	27407298	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:6;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27407299	27408275	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:6;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27408276	27408356	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:7;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27408357	27412632	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:7;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27412633	27412712	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:8;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27412713	27412960	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:8;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27412961	27413127	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:9;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27413128	27415336	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:9;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27415337	27415439	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:10;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27415440	27418034	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:10;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27418035	27418121	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:11;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	27418122	27419212	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=intron:HG00642_ch_T0001914:11;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	27419213	27419342	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG00642_ch_T0001914;gene_id=HG00642_ch_G0000723;Parent=HG00642_ch_T0001914;transcript_name=HG00642_ch_T0001914;gene_name=PARP4P1;ID=exon:HG00642_ch_T0001914:12;Name=PARP4P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	27411210	27411849	.	-	.	source_gene_common_name=CCNQP2;source_gene=ENSG00000231514.1;alternative_source_transcripts=ENST00000435741.1;gene_id=HG00642_ch_G0000724;gene_biotype=processed_pseudogene;gene_name=CCNQP2;gene_sources=liftoff;ID=HG00642_ch_G0000724;Name=CCNQP2
HG00642_chrY	CAT	transcript	27411210	27411849	1000	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=HG00642_ch_T0001915;gene_id=HG00642_ch_G0000724;Parent=HG00642_ch_G0000724;transcript_name=HG00642_ch_T0001915;gene_name=CCNQP2;ID=HG00642_ch_T0001915;Name=CCNQP2
HG00642_chrY	CAT	exon	27411210	27411849	.	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=HG00642_ch_T0001915;gene_id=HG00642_ch_G0000724;Parent=HG00642_ch_T0001915;transcript_name=HG00642_ch_T0001915;gene_name=CCNQP2;ID=exon:HG00642_ch_T0001915:0;Name=CCNQP2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	37843257	37843501	.	+	.	source_gene_common_name=CTBP2P1;source_gene=ENSG00000235857.1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;gene_id=HG00642_ch_G0000725;gene_biotype=processed_pseudogene;gene_name=CTBP2P1;gene_sources=liftoff;ID=HG00642_ch_G0000725;Name=CTBP2P1
HG00642_chrY	CAT	transcript	37843257	37843501	1000	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG00642_ch_T0001916;gene_id=HG00642_ch_G0000725;Parent=HG00642_ch_G0000725;transcript_name=HG00642_ch_T0001916;gene_name=CTBP2P1;ID=HG00642_ch_T0001916;Name=CTBP2P1
HG00642_chrY	CAT	exon	37843257	37843501	.	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG00642_ch_T0001916;gene_id=HG00642_ch_G0000725;Parent=HG00642_ch_T0001916;transcript_name=HG00642_ch_T0001916;gene_name=CTBP2P1;ID=exon:HG00642_ch_T0001916:0;Name=CTBP2P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	37869865	37870131	.	+	.	source_gene_common_name=ENSG00000305394;source_gene=ENSG00000305394.1;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;gene_id=HG00642_ch_G0000726;gene_biotype=lncRNA;gene_name=ENSG00000305394;gene_sources=liftoff;ID=HG00642_ch_G0000726;Name=ENSG00000305394
HG00642_chrY	CAT	transcript	37869865	37870131	1000	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG00642_ch_T0001917;gene_id=HG00642_ch_G0000726;Parent=HG00642_ch_G0000726;transcript_name=HG00642_ch_T0001917;gene_name=ENSG00000305394;ID=HG00642_ch_T0001917;Name=ENSG00000305394
HG00642_chrY	CAT	exon	37869865	37870131	.	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG00642_ch_T0001917;gene_id=HG00642_ch_G0000726;Parent=HG00642_ch_T0001917;transcript_name=HG00642_ch_T0001917;gene_name=ENSG00000305394;ID=exon:HG00642_ch_T0001917:0;Name=ENSG00000305394;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	37907465	37942120	.	-	.	source_gene_common_name=ENSG00000310550;source_gene=ENSG00000310550.1;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;gene_id=HG00642_ch_G0000727;gene_biotype=lncRNA;gene_name=ENSG00000310550;gene_sources=liftoff;ID=HG00642_ch_G0000727;Name=ENSG00000310550
HG00642_chrY	CAT	transcript	37907465	37942125	1000	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=HG00642_ch_T0001918;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37907465	37907568	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001918:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37907569	37911774	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001918:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37911775	37911910	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001918:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37911911	37914104	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001918:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37914105	37914281	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001918:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37914282	37933074	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001918:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37933075	37933225	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001918:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37933226	37941996	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001918:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941997	37942125	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00642_ch_T0001918;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001918;transcript_name=HG00642_ch_T0001918;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001918:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	37907472	37942120	1000	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=HG00642_ch_T0001919;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37907472	37907568	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001919:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37907569	37911774	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001919:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37911775	37911910	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001919:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37911911	37914104	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001919:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37914105	37914281	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001919:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37914282	37933074	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001919:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37933075	37933225	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001919:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37933226	37942025	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001919:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37942026	37942120	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00642_ch_T0001919;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001919;transcript_name=HG00642_ch_T0001919;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001919:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	37907475	37942120	1000	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=HG00642_ch_T0001920;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37907475	37907568	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001920:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37907569	37911774	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001920:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37911775	37911910	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001920:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37911911	37913941	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001920:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37913942	37914281	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001920:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37914282	37941996	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001920:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941997	37942120	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00642_ch_T0001920;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001920;transcript_name=HG00642_ch_T0001920;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001920:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	37907475	37942066	1000	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=HG00642_ch_T0001921;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37907475	37907568	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001921:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37907569	37911774	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001921:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37911775	37911910	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001921:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37911911	37914104	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001921:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37914105	37914281	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001921:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37914282	37941996	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001921:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941997	37942066	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00642_ch_T0001921;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001921;transcript_name=HG00642_ch_T0001921;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001921:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	37941140	37942212	1000	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=HG00642_ch_T0001922;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37941140	37941352	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001922;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001922:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37941353	37941667	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001922;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001922:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941668	37941757	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001922;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001922:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37941758	37941996	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001922;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001922:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941997	37942212	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00642_ch_T0001922;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001922;transcript_name=HG00642_ch_T0001922;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001922:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	37941150	37942097	1000	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.368;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00642_ch_T0001923;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_G0000727;transcript_name=HG00642_ch_T0001923;gene_name=ENSG00000310550;ID=HG00642_ch_T0001923;Name=ENSG00000310550
HG00642_chrY	CAT	exon	37941150	37941352	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.368;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00642_ch_T0001923;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001923;transcript_name=HG00642_ch_T0001923;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001923:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	37941353	37941667	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.368;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00642_ch_T0001923;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001923;transcript_name=HG00642_ch_T0001923;gene_name=ENSG00000310550;ID=intron:HG00642_ch_T0001923:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	37941668	37942097	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.368;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00642_ch_T0001923;gene_id=HG00642_ch_G0000727;Parent=HG00642_ch_T0001923;transcript_name=HG00642_ch_T0001923;gene_name=ENSG00000310550;ID=exon:HG00642_ch_T0001923:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	37979259	37980137	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;gene_id=HG00642_ch_G0000728;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG00642_ch_G0000728;Name=TRPC6P1
HG00642_chrY	CAT	transcript	37979259	37980137	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG00642_ch_T0001924;gene_id=HG00642_ch_G0000728;Parent=HG00642_ch_G0000728;transcript_name=HG00642_ch_T0001924;gene_name=TRPC6P1;ID=HG00642_ch_T0001924;Name=TRPC6P1
HG00642_chrY	CAT	exon	37979259	37980137	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG00642_ch_T0001924;gene_id=HG00642_ch_G0000728;Parent=HG00642_ch_T0001924;transcript_name=HG00642_ch_T0001924;gene_name=TRPC6P1;ID=exon:HG00642_ch_T0001924:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38005896	38006887	.	-	.	source_gene_common_name=AMD1P2;source_gene=ENSG00000292364.1;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;gene_id=HG00642_ch_G0000729;gene_biotype=processed_pseudogene;gene_name=AMD1P2;gene_sources=liftoff;ID=HG00642_ch_G0000729;Name=AMD1P2
HG00642_chrY	CAT	transcript	38005896	38006887	1000	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG00642_ch_T0001925;gene_id=HG00642_ch_G0000729;Parent=HG00642_ch_G0000729;transcript_name=HG00642_ch_T0001925;gene_name=AMD1P2;ID=HG00642_ch_T0001925;Name=AMD1P2
HG00642_chrY	CAT	exon	38005896	38006887	.	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG00642_ch_T0001925;gene_id=HG00642_ch_G0000729;Parent=HG00642_ch_T0001925;transcript_name=HG00642_ch_T0001925;gene_name=AMD1P2;ID=exon:HG00642_ch_T0001925:0;Name=AMD1P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38052950	38053199	.	+	.	source_gene_common_name=DPH3P2;source_gene=ENSG00000292365.1;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;gene_id=HG00642_ch_G0000730;gene_biotype=processed_pseudogene;gene_name=DPH3P2;gene_sources=liftoff;ID=HG00642_ch_G0000730;Name=DPH3P2
HG00642_chrY	CAT	transcript	38052950	38053199	1000	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=199.2;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG00642_ch_T0001926;gene_id=HG00642_ch_G0000730;Parent=HG00642_ch_G0000730;transcript_name=HG00642_ch_T0001926;gene_name=DPH3P2;ID=HG00642_ch_T0001926;Name=DPH3P2
HG00642_chrY	CAT	exon	38052950	38053199	.	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=199.2;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG00642_ch_T0001926;gene_id=HG00642_ch_G0000730;Parent=HG00642_ch_T0001926;transcript_name=HG00642_ch_T0001926;gene_name=DPH3P2;ID=exon:HG00642_ch_T0001926:0;Name=DPH3P2;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38058694	38121125	.	+	.	source_gene_common_name=VAMP7;source_gene=ENSG00000292366.1;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;gene_id=HG00642_ch_G0000731;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff;ID=HG00642_ch_G0000731;Name=VAMP7
HG00642_chrY	CAT	transcript	38058694	38121125	100	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=HG00642_ch_T0001927;Name=VAMP7
HG00642_chrY	CAT	exon	38058694	38058797	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066959	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38066814	38066959	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38066814	38066816	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=start_codon:HG00642_ch_T0001927;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066960	38072969	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38072970	38073027	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38072970	38073027	.	+	1	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38073028	38075458	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38075459	38075596	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38077844	38077934	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38097162	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38097163	38097230	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38097163	38097230	.	+	2	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38097231	38117057	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117150	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38117058	38117150	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38117151	38119238	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=intron:HG00642_ch_T0001927:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38119239	38121125	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=exon:HG00642_ch_T0001927:7;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38119239	38119307	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001927:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38119305	38119307	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00642_ch_T0001927;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001927;transcript_name=HG00642_ch_T0001927;gene_name=VAMP7;ID=stop_codon:HG00642_ch_T0001927;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38058707	38119265	1000	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=HG00642_ch_T0001928;Name=VAMP7
HG00642_chrY	CAT	exon	38058707	38058797	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066980	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066981	38072969	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38072970	38073027	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38073028	38075458	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38097162	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38097163	38097230	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38097231	38117057	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117150	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38117151	38119238	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=intron:HG00642_ch_T0001928:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38119239	38119265	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00642_ch_T0001928;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001928;transcript_name=HG00642_ch_T0001928;gene_name=VAMP7;ID=exon:HG00642_ch_T0001928:7;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38058709	38119300	1000	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=HG00642_ch_T0001929;Name=VAMP7
HG00642_chrY	CAT	exon	38058709	38058797	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066959	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38066814	38066959	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001929:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38066814	38066816	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=start_codon:HG00642_ch_T0001929;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066960	38075458	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38075459	38075492	.	+	1	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001929:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38075490	38075492	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=stop_codon:HG00642_ch_T0001929;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38097162	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38097163	38097230	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38097231	38117057	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117150	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38117151	38119238	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=intron:HG00642_ch_T0001929:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38119239	38119300	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00642_ch_T0001929;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001929;transcript_name=HG00642_ch_T0001929;gene_name=VAMP7;ID=exon:HG00642_ch_T0001929:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38058721	38117147	1000	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=HG00642_ch_T0001930;Name=VAMP7
HG00642_chrY	CAT	exon	38058721	38058797	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066955	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066956	38072969	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38072970	38073027	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38073028	38075458	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38097162	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38097163	38097230	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38097231	38117057	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=intron:HG00642_ch_T0001930:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117147	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00642_ch_T0001930;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001930;transcript_name=HG00642_ch_T0001930;gene_name=VAMP7;ID=exon:HG00642_ch_T0001930:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38058724	38121125	100	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=HG00642_ch_T0001931;Name=VAMP7
HG00642_chrY	CAT	exon	38058724	38058797	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066959	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38066814	38066959	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38066814	38066816	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=start_codon:HG00642_ch_T0001931;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066960	38072969	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38072970	38073027	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38072970	38073027	.	+	1	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38073028	38075458	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38075459	38075596	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38077844	38077934	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38117057	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117150	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38117058	38117150	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38117151	38119238	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=intron:HG00642_ch_T0001931:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38119239	38121125	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=exon:HG00642_ch_T0001931:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38119239	38119495	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001931:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38119493	38119495	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00642_ch_T0001931;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001931;transcript_name=HG00642_ch_T0001931;gene_name=VAMP7;ID=stop_codon:HG00642_ch_T0001931;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38058727	38119345	100	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_G0000731;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=HG00642_ch_T0001932;Name=VAMP7
HG00642_chrY	CAT	exon	38058727	38058797	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38058798	38066804	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38066805	38066894	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38066814	38066894	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:0;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38066814	38066816	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=start_codon:HG00642_ch_T0001932;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38066895	38075458	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38075459	38075596	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38075459	38075596	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:1;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38075597	38077843	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38077844	38077934	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38077844	38077934	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:2;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38077935	38097162	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38097163	38097230	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38097163	38097230	.	+	2	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:3;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38097231	38117057	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38117058	38117150	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38117058	38117150	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:4;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38117151	38119238	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=intron:HG00642_ch_T0001932:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38119239	38119345	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=exon:HG00642_ch_T0001932:6;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38119239	38119307	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=CDS:HG00642_ch_T0001932:5;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38119305	38119307	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00642_ch_T0001932;gene_id=HG00642_ch_G0000731;Parent=HG00642_ch_T0001932;transcript_name=HG00642_ch_T0001932;gene_name=VAMP7;ID=stop_codon:HG00642_ch_T0001932;Name=VAMP7;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38129475	38136682	.	-	.	source_gene_common_name=ENSG00000310555;source_gene=ENSG00000310555.1;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;gene_id=HG00642_ch_G0000732;gene_biotype=lncRNA;gene_name=ENSG00000310555;gene_sources=liftoff;ID=HG00642_ch_G0000732;Name=ENSG00000310555
HG00642_chrY	CAT	transcript	38129475	38136682	1000	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.899;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00642_ch_T0001933;gene_id=HG00642_ch_G0000732;Parent=HG00642_ch_G0000732;transcript_name=HG00642_ch_T0001933;gene_name=ENSG00000310555;ID=HG00642_ch_T0001933;Name=ENSG00000310555
HG00642_chrY	CAT	exon	38129475	38129757	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00642_ch_T0001933;gene_id=HG00642_ch_G0000732;Parent=HG00642_ch_T0001933;transcript_name=HG00642_ch_T0001933;gene_name=ENSG00000310555;ID=exon:HG00642_ch_T0001933:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38129758	38136511	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00642_ch_T0001933;gene_id=HG00642_ch_G0000732;Parent=HG00642_ch_T0001933;transcript_name=HG00642_ch_T0001933;gene_name=ENSG00000310555;ID=intron:HG00642_ch_T0001933:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38136512	38136682	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00642_ch_T0001933;gene_id=HG00642_ch_G0000732;Parent=HG00642_ch_T0001933;transcript_name=HG00642_ch_T0001933;gene_name=ENSG00000310555;ID=exon:HG00642_ch_T0001933:1;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38156350	38156683	.	-	.	source_gene_common_name=ELOCP24;source_gene=ENSG00000292367.1;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;gene_id=HG00642_ch_G0000733;gene_biotype=processed_pseudogene;gene_name=ELOCP24;gene_sources=liftoff;ID=HG00642_ch_G0000733;Name=ELOCP24
HG00642_chrY	CAT	transcript	38156350	38156683	1000	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG00642_ch_T0001934;gene_id=HG00642_ch_G0000733;Parent=HG00642_ch_G0000733;transcript_name=HG00642_ch_T0001934;gene_name=ELOCP24;ID=HG00642_ch_T0001934;Name=ELOCP24
HG00642_chrY	CAT	exon	38156350	38156683	.	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG00642_ch_T0001934;gene_id=HG00642_ch_G0000733;Parent=HG00642_ch_T0001934;transcript_name=HG00642_ch_T0001934;gene_name=ELOCP24;ID=exon:HG00642_ch_T0001934:0;Name=ELOCP24;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38162730	38163608	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;gene_id=HG00642_ch_G0000734;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG00642_ch_G0000734;Name=TRPC6P1
HG00642_chrY	CAT	transcript	38162730	38163608	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG00642_ch_T0001935;gene_id=HG00642_ch_G0000734;Parent=HG00642_ch_G0000734;transcript_name=HG00642_ch_T0001935;gene_name=TRPC6P1;ID=HG00642_ch_T0001935;Name=TRPC6P1
HG00642_chrY	CAT	exon	38162730	38163608	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG00642_ch_T0001935;gene_id=HG00642_ch_G0000734;Parent=HG00642_ch_T0001935;transcript_name=HG00642_ch_T0001935;gene_name=TRPC6P1;ID=exon:HG00642_ch_T0001935:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38175056	38190376	.	+	.	source_gene_common_name=IL9R;source_gene=ENSG00000292373.2;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;gene_id=HG00642_ch_G0000735;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff;ID=HG00642_ch_G0000735;Name=IL9R
HG00642_chrY	CAT	transcript	38175056	38188176	100	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_G0000735;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=HG00642_ch_T0001936;Name=IL9R
HG00642_chrY	CAT	exon	38175056	38175147	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38175120	38175147	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38175120	38175122	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=start_codon:HG00642_ch_T0001936;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38175148	38180269	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38180270	38180383	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38180270	38180383	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38180384	38180812	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38180813	38180924	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38180813	38180924	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38180925	38181040	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38181041	38181219	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38181041	38181219	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38181220	38181783	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38181784	38181929	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38181784	38181929	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38181930	38182641	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38182642	38182843	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38182642	38182843	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38182844	38183446	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38183447	38183552	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38183447	38183552	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38183553	38184887	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38184888	38184972	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38184888	38184972	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38184973	38187174	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=intron:HG00642_ch_T0001936:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38187175	38188176	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=exon:HG00642_ch_T0001936:8;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38187175	38187768	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=CDS:HG00642_ch_T0001936:8;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38187766	38187768	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00642_ch_T0001936;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001936;transcript_name=HG00642_ch_T0001936;gene_name=IL9R;ID=stop_codon:HG00642_ch_T0001936;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38175066	38190376	100	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_G0000735;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=HG00642_ch_T0001937;Name=IL9R
HG00642_chrY	CAT	exon	38175066	38175147	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38175104	38175147	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38175104	38175106	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=start_codon:HG00642_ch_T0001937;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38175148	38178767	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38178768	38178868	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38178768	38178868	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38178869	38180245	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38180246	38180383	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38180246	38180383	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38180384	38180812	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38180813	38180924	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38180813	38180924	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38180925	38181047	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:3;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38181048	38181219	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38181048	38181219	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38181220	38181812	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:4;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38181813	38181929	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38181813	38181929	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38181930	38182641	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:5;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38182642	38182843	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38182642	38182843	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38182844	38183446	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:6;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38183447	38183552	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38183447	38183552	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38183553	38187174	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=intron:HG00642_ch_T0001937:7;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38187175	38190376	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=exon:HG00642_ch_T0001937:8;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38187175	38187211	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=CDS:HG00642_ch_T0001937:8;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38187209	38187211	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00642_ch_T0001937;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001937;transcript_name=HG00642_ch_T0001937;gene_name=IL9R;ID=stop_codon:HG00642_ch_T0001937;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38175094	38180334	1000	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_G0000735;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=HG00642_ch_T0001938;Name=IL9R
HG00642_chrY	CAT	exon	38175094	38175147	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001938;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=exon:HG00642_ch_T0001938:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38175148	38178689	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001938;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=intron:HG00642_ch_T0001938:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38178690	38178868	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001938;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=exon:HG00642_ch_T0001938:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38178869	38180269	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001938;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=intron:HG00642_ch_T0001938:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38180270	38180334	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00642_ch_T0001938;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001938;transcript_name=HG00642_ch_T0001938;gene_name=IL9R;ID=exon:HG00642_ch_T0001938:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38183478	38185410	1000	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_G0000735;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=HG00642_ch_T0001940;Name=IL9R
HG00642_chrY	CAT	exon	38183478	38183552	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001940;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=exon:HG00642_ch_T0001940:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38183553	38184887	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001940;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=intron:HG00642_ch_T0001940:0;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38184888	38184972	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001940;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=exon:HG00642_ch_T0001940:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38184973	38185262	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001940;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=intron:HG00642_ch_T0001940:1;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38185263	38185410	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00642_ch_T0001940;gene_id=HG00642_ch_G0000735;Parent=HG00642_ch_T0001940;transcript_name=HG00642_ch_T0001940;gene_name=IL9R;ID=exon:HG00642_ch_T0001940:2;Name=IL9R;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38181582	38184972	.	+	.	source_gene_common_name=ENSG00000292369;source_gene=ENSG00000292369.1;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;gene_id=HG00642_ch_G0000736;gene_biotype=lncRNA;gene_name=ENSG00000292369;gene_sources=liftoff;ID=HG00642_ch_G0000736;Name=ENSG00000292369
HG00642_chrY	CAT	transcript	38181582	38184972	1000	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00642_ch_T0001939;gene_id=HG00642_ch_G0000736;Parent=HG00642_ch_G0000736;transcript_name=HG00642_ch_T0001939;gene_name=ENSG00000292369;ID=HG00642_ch_T0001939;Name=ENSG00000292369
HG00642_chrY	CAT	exon	38181582	38181929	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00642_ch_T0001939;gene_id=HG00642_ch_G0000736;Parent=HG00642_ch_T0001939;transcript_name=HG00642_ch_T0001939;gene_name=ENSG00000292369;ID=exon:HG00642_ch_T0001939:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38181930	38184887	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00642_ch_T0001939;gene_id=HG00642_ch_G0000736;Parent=HG00642_ch_T0001939;transcript_name=HG00642_ch_T0001939;gene_name=ENSG00000292369;ID=intron:HG00642_ch_T0001939:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38184888	38184972	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00642_ch_T0001939;gene_id=HG00642_ch_G0000736;Parent=HG00642_ch_T0001939;transcript_name=HG00642_ch_T0001939;gene_name=ENSG00000292369;ID=exon:HG00642_ch_T0001939:1;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38191976	38194251	.	-	.	source_gene_common_name=WASIR1;source_gene=ENSG00000292370.2;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;gene_id=HG00642_ch_G0000737;gene_biotype=lncRNA;gene_name=WASIR1;gene_sources=liftoff;ID=HG00642_ch_G0000737;Name=WASIR1
HG00642_chrY	CAT	transcript	38191976	38194244	1000	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00642_ch_T0001941;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_G0000737;transcript_name=HG00642_ch_T0001941;gene_name=WASIR1;ID=HG00642_ch_T0001941;Name=WASIR1
HG00642_chrY	CAT	exon	38191976	38192986	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00642_ch_T0001941;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001941;transcript_name=HG00642_ch_T0001941;gene_name=WASIR1;ID=exon:HG00642_ch_T0001941:0;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38192987	38194027	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00642_ch_T0001941;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001941;transcript_name=HG00642_ch_T0001941;gene_name=WASIR1;ID=intron:HG00642_ch_T0001941:0;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38194028	38194244	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00642_ch_T0001941;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001941;transcript_name=HG00642_ch_T0001941;gene_name=WASIR1;ID=exon:HG00642_ch_T0001941:1;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38191976	38194251	1000	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00642_ch_T0001942;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_G0000737;transcript_name=HG00642_ch_T0001942;gene_name=WASIR1;ID=HG00642_ch_T0001942;Name=WASIR1
HG00642_chrY	CAT	exon	38191976	38192861	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00642_ch_T0001942;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001942;transcript_name=HG00642_ch_T0001942;gene_name=WASIR1;ID=exon:HG00642_ch_T0001942:0;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38192862	38194027	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00642_ch_T0001942;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001942;transcript_name=HG00642_ch_T0001942;gene_name=WASIR1;ID=intron:HG00642_ch_T0001942:0;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38194028	38194251	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00642_ch_T0001942;gene_id=HG00642_ch_G0000737;Parent=HG00642_ch_T0001942;transcript_name=HG00642_ch_T0001942;gene_name=WASIR1;ID=exon:HG00642_ch_T0001942:1;Name=WASIR1;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38198176	38201810	.	+	.	source_gene_common_name=WASH6P;source_gene=ENSG00000292372.1;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;gene_id=HG00642_ch_G0000738;gene_biotype=protein_coding;gene_name=WASH6P;gene_sources=liftoff;ID=HG00642_ch_G0000738;Name=WASH6P
HG00642_chrY	CAT	transcript	38198176	38198914	1000	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00642_ch_T0001943;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001943;gene_name=WASH6P;ID=HG00642_ch_T0001943;Name=WASH6P
HG00642_chrY	CAT	exon	38198176	38198498	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00642_ch_T0001943;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001943;transcript_name=HG00642_ch_T0001943;gene_name=WASH6P;ID=exon:HG00642_ch_T0001943:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198499	38198856	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00642_ch_T0001943;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001943;transcript_name=HG00642_ch_T0001943;gene_name=WASH6P;ID=intron:HG00642_ch_T0001943:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38198857	38198914	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00642_ch_T0001943;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001943;transcript_name=HG00642_ch_T0001943;gene_name=WASH6P;ID=exon:HG00642_ch_T0001943:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198311	38201474	100	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=HG00642_ch_T0001944;Name=WASH6P
HG00642_chrY	CAT	exon	38198311	38198498	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38198311	38198498	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	start_codon	38198311	38198313	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=start_codon:HG00642_ch_T0001944;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198499	38198929	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38198930	38198934	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199313	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38199112	38199313	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199314	38199401	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199560	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38199402	38199560	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199561	38200219	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38200220	38200372	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38200220	38200372	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38200373	38201131	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201132	38201200	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:5;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38201132	38201200	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:5;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201201	38201340	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=intron:HG00642_ch_T0001944:5;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201474	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=exon:HG00642_ch_T0001944:6;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	CDS	38201341	38201474	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=CDS:HG00642_ch_T0001944:6;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	stop_codon	38201472	38201474	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001944;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001944;transcript_name=HG00642_ch_T0001944;gene_name=WASH6P;ID=stop_codon:HG00642_ch_T0001944;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198678	38201763	1000	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00642_ch_T0001945;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001945;gene_name=WASH6P;ID=HG00642_ch_T0001945;Name=WASH6P
HG00642_chrY	CAT	exon	38198678	38199309	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00642_ch_T0001945;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001945;transcript_name=HG00642_ch_T0001945;gene_name=WASH6P;ID=exon:HG00642_ch_T0001945:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199310	38199401	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00642_ch_T0001945;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001945;transcript_name=HG00642_ch_T0001945;gene_name=WASH6P;ID=intron:HG00642_ch_T0001945:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38201763	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00642_ch_T0001945;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001945;transcript_name=HG00642_ch_T0001945;gene_name=WASH6P;ID=exon:HG00642_ch_T0001945:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198796	38199307	1000	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001946;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001946;gene_name=WASH6P;ID=HG00642_ch_T0001946;Name=WASH6P
HG00642_chrY	CAT	exon	38198796	38198929	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001946;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001946;transcript_name=HG00642_ch_T0001946;gene_name=WASH6P;ID=exon:HG00642_ch_T0001946:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198930	38199111	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001946;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001946;transcript_name=HG00642_ch_T0001946;gene_name=WASH6P;ID=intron:HG00642_ch_T0001946:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199307	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001946;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001946;transcript_name=HG00642_ch_T0001946;gene_name=WASH6P;ID=exon:HG00642_ch_T0001946:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38201766	1000	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=HG00642_ch_T0001947;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=intron:HG00642_ch_T0001947:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199309	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199310	38199401	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=intron:HG00642_ch_T0001947:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199560	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199561	38200219	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=intron:HG00642_ch_T0001947:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38200220	38200372	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38200373	38201131	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=intron:HG00642_ch_T0001947:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201132	38201200	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201201	38201340	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=intron:HG00642_ch_T0001947:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201766	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.401;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00642_ch_T0001947;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001947;transcript_name=HG00642_ch_T0001947;gene_name=WASH6P;ID=exon:HG00642_ch_T0001947:5;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38201766	1000	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=HG00642_ch_T0001948;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=exon:HG00642_ch_T0001948:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=intron:HG00642_ch_T0001948:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199309	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=exon:HG00642_ch_T0001948:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199310	38199401	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=intron:HG00642_ch_T0001948:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38201200	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=exon:HG00642_ch_T0001948:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201201	38201340	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=intron:HG00642_ch_T0001948:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201766	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.731;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00642_ch_T0001948;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001948;transcript_name=HG00642_ch_T0001948;gene_name=WASH6P;ID=exon:HG00642_ch_T0001948:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38201810	1000	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=HG00642_ch_T0001949;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=intron:HG00642_ch_T0001949:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199313	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199314	38199401	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=intron:HG00642_ch_T0001949:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199560	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199561	38200219	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=intron:HG00642_ch_T0001949:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38200220	38200372	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38200373	38201131	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=intron:HG00642_ch_T0001949:3;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201132	38201200	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201201	38201340	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=intron:HG00642_ch_T0001949:4;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201810	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.279;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00642_ch_T0001949;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001949;transcript_name=HG00642_ch_T0001949;gene_name=WASH6P;ID=exon:HG00642_ch_T0001949:5;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38201763	1000	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=HG00642_ch_T0001950;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001950;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=exon:HG00642_ch_T0001950:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001950;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=intron:HG00642_ch_T0001950:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199309	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001950;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=exon:HG00642_ch_T0001950:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199310	38199401	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001950;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=intron:HG00642_ch_T0001950:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38201763	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00642_ch_T0001950;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001950;transcript_name=HG00642_ch_T0001950;gene_name=WASH6P;ID=exon:HG00642_ch_T0001950:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38199631	1000	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.173;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00642_ch_T0001951;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001951;gene_name=WASH6P;ID=HG00642_ch_T0001951;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38199313	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.173;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00642_ch_T0001951;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001951;transcript_name=HG00642_ch_T0001951;gene_name=WASH6P;ID=exon:HG00642_ch_T0001951:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199314	38199401	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.173;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00642_ch_T0001951;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001951;transcript_name=HG00642_ch_T0001951;gene_name=WASH6P;ID=intron:HG00642_ch_T0001951:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199631	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.173;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00642_ch_T0001951;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001951;transcript_name=HG00642_ch_T0001951;gene_name=WASH6P;ID=exon:HG00642_ch_T0001951:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38199489	1000	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=HG00642_ch_T0001952;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001952;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=exon:HG00642_ch_T0001952:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001952;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=intron:HG00642_ch_T0001952:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199309	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001952;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=exon:HG00642_ch_T0001952:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199310	38199401	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001952;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=intron:HG00642_ch_T0001952:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199489	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001952;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001952;transcript_name=HG00642_ch_T0001952;gene_name=WASH6P;ID=exon:HG00642_ch_T0001952:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38198930	38199435	1000	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=HG00642_ch_T0001953;Name=WASH6P
HG00642_chrY	CAT	exon	38198930	38198934	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001953;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=exon:HG00642_ch_T0001953:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38198935	38199111	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001953;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=intron:HG00642_ch_T0001953:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199112	38199313	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001953;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=exon:HG00642_ch_T0001953:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199314	38199401	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001953;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=intron:HG00642_ch_T0001953:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38199402	38199435	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001953;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001953;transcript_name=HG00642_ch_T0001953;gene_name=WASH6P;ID=exon:HG00642_ch_T0001953:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38199112	38199192	1000	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001954;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001954;gene_name=WASH6P;ID=HG00642_ch_T0001954;Name=WASH6P
HG00642_chrY	CAT	exon	38199112	38199192	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG00642_ch_T0001954;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001954;transcript_name=HG00642_ch_T0001954;gene_name=WASH6P;ID=exon:HG00642_ch_T0001954:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38199467	38201766	1000	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00642_ch_T0001955;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001955;gene_name=WASH6P;ID=HG00642_ch_T0001955;Name=WASH6P
HG00642_chrY	CAT	exon	38199467	38199560	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00642_ch_T0001955;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001955;transcript_name=HG00642_ch_T0001955;gene_name=WASH6P;ID=exon:HG00642_ch_T0001955:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38199561	38200219	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00642_ch_T0001955;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001955;transcript_name=HG00642_ch_T0001955;gene_name=WASH6P;ID=intron:HG00642_ch_T0001955:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38200220	38201766	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00642_ch_T0001955;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001955;transcript_name=HG00642_ch_T0001955;gene_name=WASH6P;ID=exon:HG00642_ch_T0001955:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38199924	38201654	1000	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=HG00642_ch_T0001956;Name=WASH6P
HG00642_chrY	CAT	exon	38199924	38200372	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001956;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=exon:HG00642_ch_T0001956:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38200373	38201131	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001956;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=intron:HG00642_ch_T0001956:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201132	38201200	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001956;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=exon:HG00642_ch_T0001956:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201201	38201340	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001956;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=intron:HG00642_ch_T0001956:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201654	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00642_ch_T0001956;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001956;transcript_name=HG00642_ch_T0001956;gene_name=WASH6P;ID=exon:HG00642_ch_T0001956:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38200171	38201654	1000	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_G0000738;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=HG00642_ch_T0001957;Name=WASH6P
HG00642_chrY	CAT	exon	38200171	38200372	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001957;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=exon:HG00642_ch_T0001957:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38200373	38201131	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001957;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=intron:HG00642_ch_T0001957:0;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201132	38201149	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001957;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=exon:HG00642_ch_T0001957:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201150	38201340	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001957;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=intron:HG00642_ch_T0001957:1;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38201341	38201654	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00642_ch_T0001957;gene_id=HG00642_ch_G0000738;Parent=HG00642_ch_T0001957;transcript_name=HG00642_ch_T0001957;gene_name=WASH6P;ID=exon:HG00642_ch_T0001957:2;Name=WASH6P;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38201692	38205214	.	-	.	source_gene_common_name=ENSG00000310542;source_gene=ENSG00000310542.1;gene_id=HG00642_ch_G0000739;gene_biotype=lncRNA;gene_name=ENSG00000310542;gene_sources=liftoff;ID=HG00642_ch_G0000739;Name=ENSG00000310542
HG00642_chrY	CAT	transcript	38201692	38201766	1000	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001958;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001958;gene_name=ENSG00000310542;ID=HG00642_ch_T0001958;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201692	38201766	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001958;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001958;transcript_name=HG00642_ch_T0001958;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001958:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201757	38205145	1000	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=HG00642_ch_T0001959;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201757	38201894	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001959:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201895	38202481	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001959:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38202482	38202705	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001959:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202706	38203436	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001959:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203437	38203545	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001959:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001959:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001959:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38204946	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001959:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38204947	38205145	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001959;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001959;transcript_name=HG00642_ch_T0001959;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001959:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201760	38205033	1000	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=HG00642_ch_T0001960;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201760	38202675	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001960:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202676	38203460	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001960:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203563	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001960:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203564	38203930	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001960:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001960:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38204946	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001960:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38204947	38205033	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001960;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001960;transcript_name=HG00642_ch_T0001960;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001960:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201761	38205141	1000	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=HG00642_ch_T0001961;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201761	38202933	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001961:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202934	38203460	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001961:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001961:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001961:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001961:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38204946	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001961:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38204947	38205141	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001961;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001961;transcript_name=HG00642_ch_T0001961;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001961:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201761	38205174	1000	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=HG00642_ch_T0001962;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201761	38201894	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001962:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38201895	38202481	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001962:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38202482	38202705	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001962:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202706	38203460	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001962:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001962:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001962:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001962:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38205137	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001962:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38205138	38205174	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001962;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001962;transcript_name=HG00642_ch_T0001962;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001962:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201763	38205214	1000	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=HG00642_ch_T0001963;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201763	38202705	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001963:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202706	38203460	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001963:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001963:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001963:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001963:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38205137	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001963:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38205138	38205214	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001963;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001963;transcript_name=HG00642_ch_T0001963;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001963:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38201764	38205054	1000	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=HG00642_ch_T0001964;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38201764	38202593	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001964:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202594	38203460	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001964:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001964:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001964:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001964:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38204946	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001964:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38204947	38205054	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001964;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001964;transcript_name=HG00642_ch_T0001964;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001964:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38202503	38205168	1000	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=HG00642_ch_T0001966;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38202503	38202705	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001966:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202706	38203460	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001966:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001966:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001966:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204148	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001966:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38204149	38204946	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001966:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38204947	38205168	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001966;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001966;transcript_name=HG00642_ch_T0001966;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001966:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	transcript	38203487	38204311	1000	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001967;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_G0000739;transcript_name=HG00642_ch_T0001967;gene_name=ENSG00000310542;ID=HG00642_ch_T0001967;Name=ENSG00000310542
HG00642_chrY	CAT	exon	38203487	38203545	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001967;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001967;transcript_name=HG00642_ch_T0001967;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001967:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001967;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001967;transcript_name=HG00642_ch_T0001967;gene_name=ENSG00000310542;ID=intron:HG00642_ch_T0001967:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38204311	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00642_ch_T0001967;gene_id=HG00642_ch_G0000739;Parent=HG00642_ch_T0001967;transcript_name=HG00642_ch_T0001967;gene_name=ENSG00000310542;ID=exon:HG00642_ch_T0001967:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00642_chrY	CAT	gene	38201764	38203978	.	-	.	source_gene_common_name=DDX11L16;source_gene=ENSG00000292371.1;gene_id=HG00642_ch_G0000740;gene_biotype=unprocessed_pseudogene;gene_name=DDX11L16;gene_sources=liftoff;ID=HG00642_ch_G0000740;Name=DDX11L16
HG00642_chrY	CAT	transcript	38201764	38203978	1000	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_G0000740;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=HG00642_ch_T0001965;Name=DDX11L16
HG00642_chrY	CAT	exon	38201764	38202705	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=exon:HG00642_ch_T0001965:0;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202706	38202783	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=intron:HG00642_ch_T0001965:0;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38202784	38202937	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=exon:HG00642_ch_T0001965:1;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38202938	38203105	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=intron:HG00642_ch_T0001965:1;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203106	38203183	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=exon:HG00642_ch_T0001965:2;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203184	38203460	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=intron:HG00642_ch_T0001965:2;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203461	38203545	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=exon:HG00642_ch_T0001965:3;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	intron	38203546	38203930	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=intron:HG00642_ch_T0001965:3;Name=DDX11L16;rna_support=False;reference_support=False
HG00642_chrY	CAT	exon	38203931	38203978	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00642_ch_T0001965;gene_id=HG00642_ch_G0000740;Parent=HG00642_ch_T0001965;transcript_name=HG00642_ch_T0001965;gene_name=DDX11L16;ID=exon:HG00642_ch_T0001965:4;Name=DDX11L16;rna_support=False;reference_support=False